BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2008c Length=441 Score E Sequences producing significant alignments: (Bits) Value gi|15609145|ref|NP_216524.1| hypothetical protein Rv2008c [Mycob... 874 0.0 gi|289762162|ref|ZP_06521540.1| conserved hypothetical protein [... 872 0.0 gi|15841490|ref|NP_336527.1| hypothetical protein MT2064 [Mycoba... 872 0.0 gi|289443499|ref|ZP_06433243.1| LOW QUALITY PROTEIN: conserved h... 871 0.0 gi|167970463|ref|ZP_02552740.1| hypothetical protein MtubH3_2150... 766 0.0 gi|254551031|ref|ZP_05141478.1| hypothetical protein Mtube_11301... 764 0.0 gi|289570108|ref|ZP_06450335.1| conserved hypothetical protein [... 489 3e-136 gi|148654362|ref|YP_001274567.1| AAA family ATPase [Roseiflexus ... 407 2e-111 gi|156742446|ref|YP_001432575.1| AAA family ATPase [Roseiflexus ... 401 1e-109 gi|297569375|ref|YP_003690719.1| AAA family ATPase [Desulfurivib... 395 6e-108 gi|302036035|ref|YP_003796357.1| hypothetical protein NIDE0660 [... 382 6e-104 gi|148262678|ref|YP_001229384.1| AAA family ATPase [Geobacter ur... 372 7e-101 gi|298528701|ref|ZP_07016105.1| conserved hypothetical protein [... 366 4e-99 gi|225159152|ref|ZP_03725457.1| ATPase (AAA+ superfamily)-like p... 363 4e-98 gi|341584346|ref|YP_004764837.1| ATPase [Rickettsia heilongjiang... 350 3e-94 gi|238650596|ref|YP_002916448.1| ATPase [Rickettsia peacockii st... 348 9e-94 gi|157829025|ref|YP_001495267.1| ATPase [Rickettsia rickettsii s... 348 1e-93 gi|157964915|ref|YP_001499739.1| ATPase [Rickettsia massiliae MT... 343 3e-92 gi|338732857|ref|YP_004671330.1| hypothetical protein SNE_A09620... 340 3e-91 gi|189502135|ref|YP_001957852.1| hypothetical protein Aasi_0740 ... 331 2e-88 gi|222055234|ref|YP_002537596.1| ATPase AAA [Geobacter sp. FRC-3... 327 2e-87 gi|257092950|ref|YP_003166591.1| hypothetical protein CAP2UW1_13... 322 7e-86 gi|344924841|ref|ZP_08778302.1| ATPase [Candidatus Odyssella the... 318 8e-85 gi|298530092|ref|ZP_07017494.1| AAA family ATPase [Desulfonatron... 317 3e-84 gi|344925446|ref|ZP_08778907.1| ATPase [Candidatus Odyssella the... 317 4e-84 gi|91204920|ref|YP_537275.1| ATPase [Rickettsia bellii RML369-C]... 316 5e-84 gi|229587034|ref|YP_002845535.1| Putative AAA+ superfamily ATPas... 310 4e-82 gi|91205065|ref|YP_537420.1| ATPase [Rickettsia bellii RML369-C]... 308 8e-82 gi|67458639|ref|YP_246263.1| ATPase [Rickettsia felis URRWXCal2]... 308 1e-81 gi|15892954|ref|NP_360668.1| hypothetical protein RC1031 [Ricket... 307 2e-81 gi|34581349|ref|ZP_00142829.1| hypothetical protein [Rickettsia ... 300 3e-79 gi|255035144|ref|YP_003085765.1| AAA ATPase [Dyadobacter ferment... 296 4e-78 gi|78187768|ref|YP_375811.1| hypothetical protein Plut_1926 [Chl... 293 4e-77 gi|338849124|gb|AEJ27335.1| Hypothetical protein PDI_1002 [Parac... 291 2e-76 gi|119385126|ref|YP_916182.1| hypothetical protein Pden_2398 [Pa... 288 1e-75 gi|325982591|ref|YP_004294993.1| hypothetical protein NAL212_199... 287 3e-75 gi|298529844|ref|ZP_07017247.1| AAA ATPase [Desulfonatronospira ... 285 1e-74 gi|94263487|ref|ZP_01287299.1| conserved hypothetical protein [d... 285 1e-74 gi|255530980|ref|YP_003091352.1| ATPase AAA [Pedobacter heparinu... 284 2e-74 gi|338214654|ref|YP_004658717.1| AAA ATPase [Runella slithyformi... 284 2e-74 gi|119386540|ref|YP_917595.1| hypothetical protein Pden_3833 [Pa... 283 5e-74 gi|94263109|ref|ZP_01286927.1| conserved hypothetical protein [d... 282 1e-73 gi|78033461|emb|CAJ30077.1| conserved hypothetical protein [Magn... 280 3e-73 gi|320449374|ref|YP_004201470.1| AAA ATPase [Thermus scotoductus... 279 8e-73 gi|241518216|ref|YP_002978844.1| AAA ATPase [Rhizobium leguminos... 276 4e-72 gi|84503326|ref|ZP_01001404.1| hypothetical protein OB2597_18746... 276 5e-72 gi|189346455|ref|YP_001942984.1| hypothetical protein Clim_0926 ... 274 2e-71 gi|159046286|ref|YP_001541958.1| hypothetical protein Dshi_3747 ... 273 5e-71 gi|149204538|ref|ZP_01881504.1| hypothetical protein RTM1035_004... 272 9e-71 gi|110597662|ref|ZP_01385947.1| conserved hypothetical protein [... 271 1e-70 >gi|15609145|ref|NP_216524.1| hypothetical protein Rv2008c [Mycobacterium tuberculosis H37Rv] gi|31793188|ref|NP_855681.1| hypothetical protein Mb2031c [Mycobacterium bovis AF2122/97] gi|121637892|ref|YP_978115.1| hypothetical protein BCG_2025c [Mycobacterium bovis BCG str. Pasteur 1173P2] 44 more sequence titles Length=441 Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/441 (100%), Positives = 441/441 (100%), Gaps = 0/441 (0%) Query 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA Sbjct 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 Query 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG Sbjct 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 Query 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL Sbjct 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 Query 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA Sbjct 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 Query 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ Sbjct 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 Query 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ Sbjct 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 Query 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV Sbjct 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 Query 421 AVPADQILTTGSVDELLALLK 441 AVPADQILTTGSVDELLALLK Sbjct 421 AVPADQILTTGSVDELLALLK 441 >gi|289762162|ref|ZP_06521540.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709668|gb|EFD73684.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=441 Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/441 (99%), Positives = 441/441 (100%), Gaps = 0/441 (0%) Query 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCML+ERRDA Sbjct 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLLERRDA 60 Query 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG Sbjct 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 Query 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL Sbjct 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 Query 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA Sbjct 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 Query 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ Sbjct 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 Query 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ Sbjct 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 Query 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV Sbjct 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 Query 421 AVPADQILTTGSVDELLALLK 441 AVPADQILTTGSVDELLALLK Sbjct 421 AVPADQILTTGSVDELLALLK 441 >gi|15841490|ref|NP_336527.1| hypothetical protein MT2064 [Mycobacterium tuberculosis CDC1551] gi|13881732|gb|AAK46341.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=452 Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/441 (100%), Positives = 441/441 (100%), Gaps = 0/441 (0%) Query 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA Sbjct 12 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 71 Query 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG Sbjct 72 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 131 Query 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL Sbjct 132 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 191 Query 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA Sbjct 192 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 251 Query 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ Sbjct 252 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 311 Query 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ Sbjct 312 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 371 Query 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV Sbjct 372 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 431 Query 421 AVPADQILTTGSVDELLALLK 441 AVPADQILTTGSVDELLALLK Sbjct 432 AVPADQILTTGSVDELLALLK 452 >gi|289443499|ref|ZP_06433243.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289416418|gb|EFD13658.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=441 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/441 (99%), Positives = 440/441 (99%), Gaps = 0/441 (0%) Query 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA Sbjct 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 Query 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG Sbjct 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 Query 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL Sbjct 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 Query 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA Sbjct 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 Query 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ Sbjct 241 TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ 300 Query 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ Sbjct 301 RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ 360 Query 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV Sbjct 361 DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV 420 Query 421 AVPADQILTTGSVDELLALLK 441 AVPADQILTTGSVDELLALL Sbjct 421 AVPADQILTTGSVDELLALLN 441 >gi|167970463|ref|ZP_02552740.1| hypothetical protein MtubH3_21503 [Mycobacterium tuberculosis H37Ra] gi|254232178|ref|ZP_04925505.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|308232002|ref|ZP_07414582.2| hypothetical protein TMAG_02190 [Mycobacterium tuberculosis SUMu001] 24 more sequence titles Length=389 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/389 (100%), Positives = 389/389 (100%), Gaps = 0/389 (0%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA Sbjct 1 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 60 Query 113 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 172 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA Sbjct 61 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 120 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ Sbjct 121 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 180 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW Sbjct 181 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 240 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 352 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP Sbjct 241 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 300 Query 353 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR 412 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR Sbjct 301 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR 360 Query 413 FPLSDTVVAVPADQILTTGSVDELLALLK 441 FPLSDTVVAVPADQILTTGSVDELLALLK Sbjct 361 FPLSDTVVAVPADQILTTGSVDELLALLK 389 >gi|254551031|ref|ZP_05141478.1| hypothetical protein Mtube_11301 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=389 Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 389/389 (100%), Gaps = 0/389 (0%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 ML+ERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA Sbjct 1 MLLERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 60 Query 113 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 172 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA Sbjct 61 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 120 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ Sbjct 121 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 180 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW Sbjct 181 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 240 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 352 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP Sbjct 241 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 300 Query 353 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR 412 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR Sbjct 301 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR 360 Query 413 FPLSDTVVAVPADQILTTGSVDELLALLK 441 FPLSDTVVAVPADQILTTGSVDELLALLK Sbjct 361 FPLSDTVVAVPADQILTTGSVDELLALLK 389 >gi|289570108|ref|ZP_06450335.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289543862|gb|EFD47510.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=433 Score = 489 bits (1260), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%) Query 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA Sbjct 1 MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA 60 Query 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG Sbjct 61 AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG 120 Query 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL Sbjct 121 LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL 180 Query 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA Sbjct 181 SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA 240 Query 241 TMRRAWTMLA 250 TMRRAWTMLA Sbjct 241 TMRRAWTMLA 250 >gi|148654362|ref|YP_001274567.1| AAA family ATPase [Roseiflexus sp. RS-1] gi|148566472|gb|ABQ88617.1| ATPase (AAA+ superfamily)-like protein [Roseiflexus sp. RS-1] Length=383 Score = 407 bits (1046), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 203/375 (55%), Positives = 255/375 (68%), Gaps = 0/375 (0%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 ML+ R A + R + P+V L GPRQ GKTT++R++ + P FD ENPVD RL+ Sbjct 1 MLVPRPAVIAHINRQMAIHPIVALLGPRQCGKTTVARMIAEQQPSTYFDLENPVDVRRLS 60 Query 113 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 172 P+ L L+GL+ IDE QR P LF +LRVLVDRP ARFLI GSASP+LV SESLA Sbjct 61 VPLTVLEALTGLVIIDEVQRQPPLFELLRVLVDRPHHSARFLISGSASPNLVRSVSESLA 120 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GR+ V+LSG + +VG + DRLWLRGG P SF A + S AWR+ +I TFLERD+ Q Sbjct 121 GRIGFVDLSGFDLAEVGPAQRDRLWLRGGFPRSFLADDDRSSLAWREAFIRTFLERDIPQ 180 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 LG+ IPA T+RR WTM+AHYHGQ+++ AE ARSL ++ TARRYLD L A +VR L PW Sbjct 181 LGITIPAETLRRFWTMIAHYHGQIWNAAEFARSLGTSEATARRYLDILVGAYMVRLLPPW 240 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 352 F NIGKRQ +SPK+YIRDTG+LH LLG++ ++ +P+LGASWEGF +EQ+ LL Sbjct 241 FENIGKRQVKSPKVYIRDTGILHGLLGLETLAEVQSHPRLGASWEGFAIEQIIGLLGTRD 300 Query 353 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR 412 Y+W T AELDL V L GR YGFEIK P SRSM AL DL L L I+YPG+ Sbjct 301 AYFWATHSGAELDLLVHLRGRRYGFEIKYADAPGASRSMHVALHDLGLDHLWIIYPGKQE 360 Query 413 FPLSDTVVAVPADQI 427 + L + +P + + Sbjct 361 YALDARITVLPMEAL 375 >gi|156742446|ref|YP_001432575.1| AAA family ATPase [Roseiflexus castenholzii DSM 13941] gi|156233774|gb|ABU58557.1| ATPase (AAA+ superfamily)-like protein [Roseiflexus castenholzii DSM 13941] Length=383 Score = 401 bits (1030), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 203/375 (55%), Positives = 256/375 (69%), Gaps = 0/375 (0%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 MLI R ++ R L P+V L GPRQ GKTT++R+VG+ FD ENPVD RL+ Sbjct 1 MLIPRPTVINQITRLLAIHPIVALLGPRQCGKTTVARMVGEQQASTYFDLENPVDIRRLS 60 Query 113 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 172 P+ L LSGLI IDE Q+ PDLF +LRVLVDRP ARFL+LG ASP LV ASESLA Sbjct 61 APLTVLETLSGLIIIDEVQQRPDLFQLLRVLVDRPQNNARFLLLGFASPHLVRSASESLA 120 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GR+ V+LSG + +VG + DRLW+RGG P SF A + S AWR+ +I TFLERD+ Q Sbjct 121 GRIGFVDLSGFDLTEVGVAQRDRLWVRGGFPRSFLADDDPSSMAWREAFIRTFLERDIPQ 180 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 LG+ IPA +RR WTM+AH+HGQ ++ AE ARSL +++TARRYLD L A +VR L PW Sbjct 181 LGITIPAEALRRFWTMVAHFHGQQWNAAEFARSLGASESTARRYLDILGGAYMVRVLPPW 240 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 352 F N+GKRQ RSPK+YIRD+G+LH LL ++ ++ +PKLGASWEGF +EQ+ LL Sbjct 241 FENLGKRQVRSPKVYIRDSGILHGLLHLETLADVQSHPKLGASWEGFAVEQIIRLLDTRD 300 Query 353 LYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHR 412 Y+W T AELDL V L GR YGFEIK P ++RSMR AL DL L L ++YPG Sbjct 301 AYFWATHSGAELDLLVHLRGRRYGFEIKYADAPGVTRSMRIALSDLGLEHLWVIYPGRQE 360 Query 413 FPLSDTVVAVPADQI 427 + L+ + +P D + Sbjct 361 YALTTQITVLPLDAL 375 >gi|297569375|ref|YP_003690719.1| AAA family ATPase [Desulfurivibrio alkaliphilus AHT2] gi|296925290|gb|ADH86100.1| AAA family ATPase [Desulfurivibrio alkaliphilus AHT2] Length=381 Score = 395 bits (1016), Expect = 6e-108, Method: Compositional matrix adjust. Identities = 196/370 (53%), Positives = 253/370 (69%), Gaps = 0/370 (0%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLAD 113 +I R + A+ R+PV L GPRQ GKTTL+R++ +S FD E+ D RL + Sbjct 1 MIPRHRYRKAISVAIERSPVCALLGPRQCGKTTLARMMAQSYSAHYFDLESEADRRRLQN 60 Query 114 PMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAG 173 P L L LSGL+ +DE Q +P+LF LRVLVDRP AR+LILGSASP ++ SE+LAG Sbjct 61 PELMLGPLSGLVILDEIQIVPELFNSLRVLVDRPDNGARYLILGSASPQIIKGVSETLAG 120 Query 174 RVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQL 233 R+E V+L+G + ++ +RLWLRGG P SF A S DS AWR+G+I TFLERD+ QL Sbjct 121 RIEFVDLAGFDLAEIPHGQEERLWLRGGFPRSFLAASEADSLAWREGFIRTFLERDIPQL 180 Query 234 GVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWF 293 G+ IPAA MRR WTMLAH HGQ ++ +EL RS+ ++ T R YLD LT +VRQL PW Sbjct 181 GISIPAAAMRRFWTMLAHLHGQTWNASELGRSMGLSDKTVRAYLDILTGTYMVRQLQPWH 240 Query 294 ANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPL 353 NIGKRQ ++PKI++RD+GLLH LL IDD AL +P+LGASWEGF LEQ+ L+ P+ Sbjct 241 ENIGKRQVKAPKIFLRDSGLLHSLLSIDDLSALLGHPRLGASWEGFALEQVLTLVGPDQA 300 Query 354 YYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRF 413 ++W T AELDL + G+ YG E K + P I++SM SALVDL LA L +VYPG H + Sbjct 301 WFWATHAGAELDLLIFAGGKRYGVEFKFSEAPKITKSMHSALVDLNLAHLWVVYPGAHSY 360 Query 414 PLSDTVVAVP 423 P+ D + VP Sbjct 361 PVHDRISVVP 370 >gi|302036035|ref|YP_003796357.1| hypothetical protein NIDE0660 [Candidatus Nitrospira defluvii] gi|300604099|emb|CBK40431.1| conserved protein of unknown function, putative AAA+ superfamily ATPase [Candidatus Nitrospira defluvii] Length=410 Score = 382 bits (982), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 208/400 (52%), Positives = 265/400 (67%), Gaps = 6/400 (1%) Query 41 HEISAPTARISCM----LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR-LVGKSA 95 HE A AR S +I R R+R AL R VV+L GPRQ GKTTL+R L+ + + Sbjct 8 HENHAVNARFSWYDQFAMISRPAILDRIRAALARTAVVVLAGPRQCGKTTLARELLSEDS 67 Query 96 PECTFDAENPVDATRLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLI 155 P FD E+P+ RL +P L L GL+ IDE QR PDLFPVLRVL DR PARFLI Sbjct 68 PN-YFDLEDPLSLARLDEPKTTLEPLQGLVVIDEIQRRPDLFPVLRVLADRKKQPARFLI 126 Query 156 LGSASPDLVGLASESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSA 215 LGSAS +L+ +SESLAGR+E +E+ G TV +VG + +LW RG P +F AR+ DS Sbjct 127 LGSASGELLRQSSESLAGRMERIEIGGFTVDEVGLQSVSQLWRRGSFPLAFLARTEMDSL 186 Query 216 AWRDGYITTFLERDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARR 275 AWR +I T LERDL Q GVR+PAA + R WTM+AH HGQ ++ AE AR+L V +T+RR Sbjct 187 AWRKQFIQTLLERDLPQWGVRVPAAALLRFWTMVAHCHGQTWNAAEPARALGVNPSTSRR 246 Query 276 YLDALTDALVVRQLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGAS 335 YLD LTDAL+VRQL PW AN+GKRQ + PK+Y+RD+GLLH+L G+ A+ +P++GAS Sbjct 247 YLDLLTDALMVRQLQPWHANLGKRQVKMPKVYVRDSGLLHQLFGLGTEKAILSHPRVGAS 306 Query 336 WEGFVLEQLAALLAPNPLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSAL 395 WEGFV+EQ+ A + Y+W T Q AE+DL + R G E KR P ++ S+R AL Sbjct 307 WEGFVIEQVLAAELYDEAYFWATHQGAEIDLILRRGDRLLGVECKRVDAPRLTPSIRIAL 366 Query 396 VDLQLARLAIVYPGEHRFPLSDTVVAVPADQILTTGSVDE 435 DL+L R+AIVYPG R L+D V AVP + G + E Sbjct 367 DDLRLERVAIVYPGTKRVALTDRVEAVPLGALAVPGHLFE 406 >gi|148262678|ref|YP_001229384.1| AAA family ATPase [Geobacter uraniireducens Rf4] gi|146396178|gb|ABQ24811.1| ATPase (AAA+ superfamily)-like protein [Geobacter uraniireducens Rf4] Length=380 Score = 372 bits (955), Expect = 7e-101, Method: Compositional matrix adjust. Identities = 187/370 (51%), Positives = 249/370 (68%), Gaps = 0/370 (0%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLAD 113 +I R + +L AL R+ + LL GPRQ GKTTL+R S FD E+PV RL + Sbjct 1 MIARTHSKVQLETALSRSRITLLIGPRQCGKTTLARQFVPSDSTNYFDLEDPVSLARLEE 60 Query 114 PMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAG 173 PM AL+ L+GL+ IDE QR P+LFPVLRVL DR +PARFLILGSA+P+L+ +SESLAG Sbjct 61 PMTALAPLTGLVVIDEVQRRPELFPVLRVLADRQPLPARFLILGSAAPELLRQSSESLAG 120 Query 174 RVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQL 233 R+E+V +SG ++ +VG R WLRGG P S+ A S+ DS AW + T +ERD+ QL Sbjct 121 RMEIVTMSGFSLAEVGIEQQSRHWLRGGFPCSYLAASDNDSFAWLKSFTLTLVERDIPQL 180 Query 234 GVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWF 293 G+ +PAA + WTMLAH HGQ+++ A ARSL V + T RRYLD L +VRQL PW Sbjct 181 GIGVPAAMLIHFWTMLAHCHGQIWNAAPPARSLGVTEPTVRRYLDLLEGVFMVRQLQPWH 240 Query 294 ANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPL 353 AN+ KRQ +SPK+Y RDTG+LH LLGI L +P GASWEG+V+E+ +++P+ Sbjct 241 ANLKKRQVKSPKVYFRDTGVLHHLLGIRGERELLNHPACGASWEGYVIEEAIRVVSPDEA 300 Query 354 YYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRF 413 Y+W T AELDL + +G G E KRT P ++ SMR++L DL+L RL ++YPG R+ Sbjct 301 YFWATHNGAELDLLLVKNGLRIGIECKRTDAPRLTTSMRTSLTDLELDRLVVIYPGIRRY 360 Query 414 PLSDTVVAVP 423 L++ V +P Sbjct 361 SLTEGVDVLP 370 >gi|298528701|ref|ZP_07016105.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512353|gb|EFI36255.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length=386 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 189/382 (50%), Positives = 258/382 (68%), Gaps = 6/382 (1%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGK--SAPECTFDAENPVDATRL 111 +I R + L AL P V + G RQ GKTTL+ ++ + S P FD EN D RL Sbjct 1 MIARNNEINLLLEALATYPAVGIIGARQVGKTTLAAMLTRKWSGPVHHFDLENSEDMARL 60 Query 112 ADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESL 171 DPML L L GL+ +DE QR+P++FP LRVL+D+ + RFLILGSASP ++ +SESL Sbjct 61 FDPMLTLKELRGLVILDEIQRMPEIFPALRVLIDKKLDDLRFLILGSASPQMLRQSSESL 120 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGR+ LSGL + ++ S +++LWLRGG P SF A+ + S WR +++TFLERDL Sbjct 121 AGRIRYHRLSGLGLDEIPSGQSEQLWLRGGFPLSFLAQDDAKSFEWRKAFVSTFLERDLP 180 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 QLG+ + + T+RR W MLAHYHGQ+++ +E ARS VA TT R+YLD LTDALVVRQ+ P Sbjct 181 QLGINVSSTTLRRFWNMLAHYHGQIWNASEFARSFGVADTTVRQYLDRLTDALVVRQVQP 240 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN 351 W NI KRQ +SPK++I D+GL H LL + + + +PK GA+WEGFV+EQ+ LL + Sbjct 241 WHENISKRQVKSPKVFICDSGLTHALLNLPAKHDVLGHPKSGATWEGFVIEQIIRLLRAD 300 Query 352 --PLYYWRTQQDAELD-LYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYP 408 ++W T A+LD L+V S R GFEIKRTS+P ++RSMR A+ DL+L L +++ Sbjct 301 ESECFHWATHSGAKLDFLHVRGSTRT-GFEIKRTSSPRLTRSMRIAMHDLKLKHLFVIHA 359 Query 409 GEHRFPLSDTVVAVPADQILTT 430 GEH FPL++ + AVP ++ T Sbjct 360 GEHIFPLAENIKAVPISRLSET 381 >gi|225159152|ref|ZP_03725457.1| ATPase (AAA+ superfamily)-like protein [Opitutaceae bacterium TAV2] gi|224802254|gb|EEG20521.1| ATPase (AAA+ superfamily)-like protein [Opitutaceae bacterium TAV2] Length=381 Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 191/371 (52%), Positives = 243/371 (66%), Gaps = 2/371 (0%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR-LVGKSAPECTF-DAENPVDATRL 111 +I+R + A + L+ PV +L GPRQ GKTTL+R E TF D ENP D RL Sbjct 1 MIQRSQSEAAIATGLNEFPVTILLGPRQCGKTTLARDFAATHTGETTFWDLENPNDRARL 60 Query 112 ADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESL 171 A PMLAL L GL+ +DE QR+P+LF VLRVL DR + RFL+LGSASP++V SE+L Sbjct 61 ASPMLALERLRGLVVLDEVQRMPELFEVLRVLADRRPINTRFLLLGSASPNIVKSVSETL 120 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGR V++ G ++ +V + LWLRGG P SF ARS + S WR+ ++ TFLERD+ Sbjct 121 AGRACFVDMRGFSLDEVAPENWETLWLRGGFPDSFLARSGDASMRWRNNFVRTFLERDMP 180 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 LG R A RR WTMLAH HGQL + A LA SL V+ R+ LD T A ++RQL P Sbjct 181 ALGTRTAAEESRRLWTMLAHCHGQLLNVASLAGSLGVSAYAIRQQLDLFTGAFMLRQLPP 240 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN 351 WF N GKR +SPK+Y+RD+G+LH LLGI AL +P LGASWEGF +E+ + L Sbjct 241 WFENAGKRVVKSPKVYLRDSGILHNLLGIPTEDALLGHPILGASWEGFAMEETLSALGNP 300 Query 352 PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEH 411 ++WRTQ AELDL V +G+ GFE K TS P SRSM SAL DL+L +L +VYPG Sbjct 301 EAWHWRTQAGAELDLLVLRNGKRLGFEFKHTSAPRTSRSMHSALEDLKLEKLFVVYPGTD 360 Query 412 RFPLSDTVVAV 422 RFPL++ + A+ Sbjct 361 RFPLTEKIEAL 371 >gi|341584346|ref|YP_004764837.1| ATPase [Rickettsia heilongjiangensis 054] gi|340808571|gb|AEK75159.1| ATPase [Rickettsia heilongjiangensis 054] Length=389 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 170/371 (46%), Positives = 239/371 (65%), Gaps = 9/371 (2%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR--LVGKSAPECT-FDAENPVDATRLAD 113 R+ + + + V L GPRQ GKTTLS+ + + P+ FD ENP+D RL + Sbjct 8 RKQFLSSIIKHFKTHKVCALLGPRQCGKTTLSKQFVEAYNIPKINIFDLENPLDLARLNE 67 Query 114 PMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAG 173 PMLALS L G + IDE Q P+LFP+LRVLVD+ +FL+LGSAS DL+ SE+LAG Sbjct 68 PMLALSDLKGFVIIDEIQYKPNLFPILRVLVDKT--DIKFLVLGSASRDLIKQGSETLAG 125 Query 174 RVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQL 233 R+ +E++ T+ +V S +LW+RGG P S+ A E SA WR YI TFLERD+ L Sbjct 126 RIGYIEMTPFTLSEV--SGTQQLWIRGGFPLSYLADDEELSALWRQNYIKTFLERDIPNL 183 Query 234 GVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWF 293 G IP +RR W ML HYH + + +EL SL ++ TA+ YLD L ++R L PW+ Sbjct 184 GFTIPYMQLRRFWLMLCHYHANILNASELGNSLSISYHTAKHYLDILEGTFMIRILQPWY 243 Query 294 ANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA--PN 351 N+ KRQ ++PKI+ RD+G+ H LLG+++ AL +PK+GASWEGF LEQ+ P Sbjct 244 ENLKKRQVKTPKIFFRDSGIYHALLGLNNYEALSTHPKIGASWEGFALEQIIRYYKAEPE 303 Query 352 PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEH 411 Y+W + AE+DL + +G+ GFEIK T+TPSI++SMR +L DL+L ++ +++PGE Sbjct 304 ECYFWSSHNGAEIDLLIFKNGKRLGFEIKYTNTPSITKSMRISLEDLKLDQINVIFPGEI 363 Query 412 RFPLSDTVVAV 422 F LS+ + A+ Sbjct 364 SFKLSEKIQAI 374 >gi|238650596|ref|YP_002916448.1| ATPase [Rickettsia peacockii str. Rustic] gi|238624694|gb|ACR47400.1| ATPase [Rickettsia peacockii str. Rustic] Length=384 Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 169/371 (46%), Positives = 239/371 (65%), Gaps = 9/371 (2%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR--LVGKSAPECT-FDAENPVDATRLAD 113 R+ + + + V L GPRQ GKTTLS+ + + P+ FD ENP+D RL + Sbjct 3 RKQFLSSIIKHFKTHKVCALLGPRQCGKTTLSKQFVEAYNIPKINIFDLENPLDLARLNE 62 Query 114 PMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAG 173 PMLALS L G + IDE Q P+LFP+LRVLVD +FL+LGSAS DL+ SE+LAG Sbjct 63 PMLALSDLKGFVIIDEIQYKPNLFPILRVLVD--TTDIKFLVLGSASRDLIKQGSETLAG 120 Query 174 RVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQL 233 R+ +E++ T+ +V S +LW+RGG P S+ A E SA WR YI TFLERD+ L Sbjct 121 RIGYIEMTPFTLSEV--SGTQQLWIRGGFPLSYLADDEELSALWRQNYIKTFLERDIPNL 178 Query 234 GVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWF 293 G IP+ +RR W ML HYH + + +EL SL ++ TA+ YLD L ++R L PW+ Sbjct 179 GFTIPSMQLRRFWLMLCHYHANILNASELGNSLSISYHTAKHYLDILEGTFMIRILQPWY 238 Query 294 ANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA--PN 351 N+ KRQ ++PKI+ RD+G+ H LLG+++ AL +PK+GASWEGF LEQ+ P Sbjct 239 ENLKKRQVKTPKIFFRDSGIYHALLGLNNYEALSTHPKIGASWEGFALEQIVRYYKAEPE 298 Query 352 PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEH 411 Y+W + AE+DL + +G+ GFEIK T+TPSI++SM+ +L DL+L ++ +++PGE Sbjct 299 ECYFWSSHNGAEIDLLIFKNGKRLGFEIKYTNTPSITKSMQISLEDLKLDQINVIFPGEI 358 Query 412 RFPLSDTVVAV 422 F LS+ + A+ Sbjct 359 SFKLSEKIQAI 369 >gi|157829025|ref|YP_001495267.1| ATPase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933749|ref|YP_001650538.1| putative ATPase [Rickettsia rickettsii str. Iowa] gi|157801506|gb|ABV76759.1| Putative AAA+ superfamily ATPase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908836|gb|ABY73132.1| hypothetical ATPase [Rickettsia rickettsii str. Iowa] Length=384 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 169/371 (46%), Positives = 239/371 (65%), Gaps = 9/371 (2%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR--LVGKSAPECT-FDAENPVDATRLAD 113 R+ + + + V L GPRQ GKTTLS+ + + P+ FD ENP+D RL + Sbjct 3 RKQFLSSIIKHFKTHKVCALLGPRQCGKTTLSKQFVEAYNIPKINIFDLENPLDLARLNE 62 Query 114 PMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAG 173 PMLALS L G + IDE Q P+LFP+LRVLVD +FL+LGSAS DL+ SE+LAG Sbjct 63 PMLALSDLQGFVIIDEIQYKPNLFPILRVLVD--TTDIKFLVLGSASRDLIKQGSETLAG 120 Query 174 RVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQL 233 R+ +E++ T+ +V S +LW+RGG P S+ A E SA WR YI TFLERD+ L Sbjct 121 RIGYIEMTPFTLSEV--SGTQQLWIRGGFPLSYLADDEELSALWRQNYIKTFLERDIPNL 178 Query 234 GVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWF 293 G IP+ +RR W ML HYH + + +EL SL ++ TA+ YLD L ++R L PW+ Sbjct 179 GFTIPSLQLRRFWLMLCHYHANILNASELGNSLSISYHTAKHYLDILEGTFMIRILQPWY 238 Query 294 ANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA--PN 351 N+ KRQ ++PKI+ RD+G+ H LLG+++ AL +PK+GASWEGF LEQ+ P Sbjct 239 ENLKKRQVKTPKIFFRDSGIYHALLGLNNYEALSTHPKIGASWEGFALEQIVRYYKAEPE 298 Query 352 PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEH 411 Y+W + AE+DL + +G+ GFEIK T+TPSI++SM+ +L DL+L ++ +++PGE Sbjct 299 ECYFWSSHNGAEIDLLIFKNGKRLGFEIKYTNTPSITKSMQISLEDLKLDQINVIFPGEI 358 Query 412 RFPLSDTVVAV 422 F LS+ + A+ Sbjct 359 SFKLSEKIQAI 369 >gi|157964915|ref|YP_001499739.1| ATPase [Rickettsia massiliae MTU5] gi|157844691|gb|ABV85192.1| Putative AAA+ superfamily ATPase [Rickettsia massiliae MTU5] Length=384 Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 166/371 (45%), Positives = 238/371 (65%), Gaps = 9/371 (2%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR--LVGKSAPECT-FDAENPVDATRLAD 113 R+ + + + V L GPRQ GKTTLS+ + + P+ FD ENP+D RL + Sbjct 3 RKQFLSSIIKHFKTHKVCALLGPRQCGKTTLSKQFVEAYNIPKINIFDLENPLDLARLNE 62 Query 114 PMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAG 173 PMLALS L G + ID Q P+LFP+LRVLVD +FL+LGSAS DL+ SE+LAG Sbjct 63 PMLALSDLKGFVIIDAIQYKPNLFPILRVLVD--TTDIKFLVLGSASRDLIKQGSETLAG 120 Query 174 RVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQL 233 R+ +E++ T+ +V S +LW+RGG P S+ A E SA WR YI TFLERD+ L Sbjct 121 RIGYIEMTPFTLSEV--SGTQQLWIRGGFPLSYLADDEELSALWRQNYIKTFLERDIPNL 178 Query 234 GVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWF 293 G IP+ +RR W ML HYH +F+ +EL SL ++ TA+ YLD L ++R L PW+ Sbjct 179 GFTIPSMQLRRFWLMLCHYHANIFNASELGNSLSISYHTAKHYLDILEGTFMIRILQPWY 238 Query 294 ANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA--PN 351 N+ KRQ ++PKI+ RD+G+ H LLG+++ +L +PK+GASW+GF LEQ+ Sbjct 239 ENLKKRQVKTPKIFFRDSGIYHALLGLNNYESLSTHPKIGASWKGFALEQIIRYYKAESE 298 Query 352 PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEH 411 Y+W + AE+DL + +G+ GFEIK T+TPSI++SM+ +L DL+L ++ +++PGE Sbjct 299 ECYFWSSHNGAEIDLLIFKNGKRLGFEIKYTNTPSITKSMQISLKDLKLDQMNVIFPGEI 358 Query 412 RFPLSDTVVAV 422 F LS+ + A+ Sbjct 359 SFKLSEKIQAI 369 >gi|338732857|ref|YP_004671330.1| hypothetical protein SNE_A09620 [Simkania negevensis Z] gi|336482240|emb|CCB88839.1| uncharacterized protein Mb2031c [Simkania negevensis Z] Length=384 Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 170/374 (46%), Positives = 230/374 (62%), Gaps = 8/374 (2%) Query 62 ARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAP----ECTFDAENPVDATRLADPMLA 117 +++ + P+V + GPRQ GKTTL+R+ E FD E+ D RLA P Sbjct 8 KQIKEGFNTHPIVGILGPRQCGKTTLARMYANERNTIPLENYFDLEDLNDIERLASPQTT 67 Query 118 LSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVEL 177 LS L GLI IDE QR P+LF LRVLVDRP +FLILGSASPDL+ +SE+L GR+ Sbjct 68 LSELKGLIIIDEIQRRPELFQTLRVLVDRPNSQQKFLILGSASPDLLRQSSETLTGRIHY 127 Query 178 VELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRI 237 +EL+ +V LW RGG P SF A + S WR YI TF+E+D+ LG ++ Sbjct 128 IELTPFNYNEVQDLTT--LWHRGGFPRSFLANDSGASYIWRKSYIRTFIEQDIPSLGFKL 185 Query 238 PAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIG 297 P +RR W ML HYHG +++G+E+ RS++++ T R Y D L +++RQL PW+ NI Sbjct 186 PPEQLRRFWMMLTHYHGCMYNGSEIGRSINLSYKTIRSYTDILAGTMMIRQLQPWYENIS 245 Query 298 KRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAAL--LAPNPLYY 355 KRQ +SPKIY RD+GL H LLGI++ L +PKLGASWEGF LE++ + ++ Sbjct 246 KRQVKSPKIYFRDSGLFHVLLGIENESELRLHPKLGASWEGFALEEIIRYHEVDTYNCFF 305 Query 356 WRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPL 415 W TQ AELDL + G+ GFE K T +P +S+SMR A+ DL+L + I+YPG F L Sbjct 306 WATQASAELDLLILKKGKRLGFEFKYTDSPRVSKSMRIAINDLKLDEIVIIYPGIKSFSL 365 Query 416 SDTVVAVPADQILT 429 + + A +Q L Sbjct 366 DEKIRAAGLEQYLN 379 >gi|189502135|ref|YP_001957852.1| hypothetical protein Aasi_0740 [Candidatus Amoebophilus asiaticus 5a2] gi|189497576|gb|ACE06123.1| hypothetical protein Aasi_0740 [Candidatus Amoebophilus asiaticus 5a2] Length=384 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 172/370 (47%), Positives = 229/370 (62%), Gaps = 7/370 (1%) Query 55 IERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECT---FDAENPVDATRL 111 ++R A+++ P+ + GPRQ GKTTL+R + +D E+P D RL Sbjct 1 MKRNRFLAKIKELFRVHPICAILGPRQCGKTTLARQFTQENNFHQVHWYDLEDPRDLARL 60 Query 112 ADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESL 171 PML+L L GLI IDE QR PDLFP+LRVLVDR ++LILGSAS L+ +SESL Sbjct 61 DQPMLSLESLEGLIIIDEIQRRPDLFPLLRVLVDRQPAHQQYLILGSASKILLQQSSESL 120 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGR+ +EL+ +V + + D LW+RGG P SF S+ DS WR YI TFLE DL Sbjct 121 AGRIGYMELTPFSVSE--THDIDTLWVRGGFPRSFLGDSDADSFTWRTNYIRTFLEMDLP 178 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 LG IPA + R W ML YHGQLF+ ++L RSL V+ T R+YLD L ++R L P Sbjct 179 SLGFNIPAQQLYRFWMMLTQYHGQLFNASDLGRSLSVSDHTVRKYLDILEGTFMIRTLQP 238 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAAL--LA 349 WFANI KR ++PKIY RD+G+L+ LL + +R A+ER + GA WEGF LE++ L Sbjct 239 WFANIQKRHVKTPKIYFRDSGILNALLDLPNRTAMERYARFGALWEGFALEEIVRFHTLH 298 Query 350 PNPLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPG 409 PN ++WRT AELDL + R GFE K P ++ SMR A+ DL L +L ++YPG Sbjct 299 PNQAFFWRTHAGAELDLLFKQEDRLIGFEFKYADAPKLTPSMRLAIEDLGLDKLNVIYPG 358 Query 410 EHRFPLSDTV 419 + +PL ++ Sbjct 359 DVDYPLGYSI 368 >gi|222055234|ref|YP_002537596.1| ATPase AAA [Geobacter sp. FRC-32] gi|221564523|gb|ACM20495.1| AAA ATPase [Geobacter sp. FRC-32] Length=383 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 178/379 (47%), Positives = 243/379 (65%), Gaps = 7/379 (1%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSR-LVGKSAPECTF-DAENPVDATRL 111 +IER AA ++ ++ PV L GPRQ GKTTL++ L G+ + D E P D +L Sbjct 1 MIERFKYAAVMK-SVQTFPVTALLGPRQVGKTTLAKQLAGQYGGSTIYLDLELPSDLNKL 59 Query 112 ADPMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASES 170 P L L S LI IDE QR P+LF +LR LVD+ P RF+ILGSASPDL+ ASES Sbjct 60 QSPELYLREHSDALIIIDEIQRKPELFALLRALVDQERRPGRFMILGSASPDLMRHASES 119 Query 171 LAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDL 230 LAGRV EL L + + GS + +LWLRGG P SF A S+ +S WR +I T+LERD+ Sbjct 120 LAGRVVYHELPPLCLTETGSDSIRKLWLRGGYPNSFLAGSDAESHQWRQAFIATYLERDI 179 Query 231 AQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLT 290 QLGVRIPAA + R WTMLAH +GQL++ + +A + ++ TT R YLD L D ++RQL Sbjct 180 PQLGVRIPAAQLGRFWTMLAHLNGQLWNASHIAAGMGLSSTTMRHYLDVLEDTFIIRQLK 239 Query 291 PWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAP 350 PWFAN GKR ++PKIY+RDTGLLH LL + L +P +G+SWEGFV+EQ+ A L P Sbjct 240 PWFANTGKRLTKAPKIYLRDTGLLHSLLQLGTEDLLMSHPGVGSSWEGFVIEQILATL-P 298 Query 351 NPL--YYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYP 408 + +++RT AE+D+ + + E+K ++TP +S+ A DL + +VYP Sbjct 299 DGYQSFFYRTNAGAEIDMILADGKKKIAVEVKYSATPKVSKGFWFAFKDLGCHKGYVVYP 358 Query 409 GEHRFPLSDTVVAVPADQI 427 G R+P+ + V A+PA ++ Sbjct 359 GRDRYPIGEGVEALPAVEL 377 >gi|257092950|ref|YP_003166591.1| hypothetical protein CAP2UW1_1338 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045474|gb|ACV34662.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length=399 Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 178/392 (46%), Positives = 245/392 (63%), Gaps = 14/392 (3%) Query 50 ISCMLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKS--APECTFDAENPVD 107 ++ ++ R+ L + L R PV+ L GPRQ GKTTL+ + + P +D E+P D Sbjct 2 LNFSMLRRQVHLDHLLQRLSRFPVLALLGPRQVGKTTLAGQLAATWDGPVRHYDLEDPDD 61 Query 108 ATRLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLA 167 RLADP AL L+GL+ +DE Q PDLFP+LRVL DRP PARFLILGSA+P+L+ + Sbjct 62 QARLADPAFALRPLTGLVILDEIQTRPDLFPLLRVLADRPDTPARFLILGSAAPELLRQS 121 Query 168 SESLAGRVELVELSGLTVRDVGSSAA---------DRLWLRGGLPPSFTARSNEDSAAWR 218 +ESLAGRV EL G + ++ ++ D WLRGG P +F A S WR Sbjct 122 AESLAGRVAFQELDGFGLDELAAADGQHRIEPDWLDVRWLRGGFPRAFLASDLATSREWR 181 Query 219 DGYITTFLERDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLD 278 + +I T+LERDL QLG+ +PA T+RR WTMLAHYHGQ ++ +E++RSL V+ T RYLD Sbjct 182 EAFIRTYLERDLPQLGINLPALTLRRFWTMLAHYHGQTWNSSEISRSLGVSDKTVSRYLD 241 Query 279 ALTDALVVRQLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEG 338 L + +L PW N+GKR+ ++PK+Y+ DTG+LH LLGI D AL +PK GASWEG Sbjct 242 ILEGTYMAYRLLPWHTNLGKREVKAPKVYLSDTGILHSLLGIGDTDALLAHPKCGASWEG 301 Query 339 FVLEQLA--ALLAPNPLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALV 396 ++ ++ + P ++W AELDL + +G+ GFEIK T +P + +MRSA Sbjct 302 LIVREIIRRSDARPGEAFFWGVHTGAELDLLIAKNGKRLGFEIKLTRSPRATVAMRSARD 361 Query 397 DLQLARLAIVYPGEH-RFPLSDTVVAVPADQI 427 L L L ++ GE +PLS+ + AVPA I Sbjct 362 VLNLQHLYVICHGEGPPWPLSEGITAVPARNI 393 >gi|344924841|ref|ZP_08778302.1| ATPase [Candidatus Odyssella thessalonicensis L13] Length=379 Score = 318 bits (816), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 168/369 (46%), Positives = 226/369 (62%), Gaps = 8/369 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTF-DAENPVDATRLA 112 +I R +++ A V + GPRQ+GKTTL++L + F D ENP D L Sbjct 1 MIRRDYYLNQIQEAFEIHSVTAILGPRQSGKTTLAKLYAQGLSHVHFFDLENPQDLAILE 60 Query 113 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 172 LAL+ L G I IDE QR P+LFP LR L D +FLILGSAS DL+ +SE+LA Sbjct 61 SASLALAPLQGTIVIDEIQRRPELFPYLRFLADNS--DKKFLILGSASQDLIQQSSETLA 118 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GR+ +EL + ++ ++ WLRGG P SF A SN S WR YI TFLERDL+ Sbjct 119 GRITYIELPPFLLWEIND--MEKHWLRGGYPKSFLASSNSQSENWRVNYIKTFLERDLSM 176 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 +G++ ++ MRR W+MLAHYHGQ+ + +EL+RSLD+ T RRY+D L ++RQL PW Sbjct 177 MGIQTVSSNMRRLWSMLAHYHGQIANISELSRSLDMNDKTIRRYMDILEGCFMIRQLKPW 236 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNP 352 N+ KRQ + K+YIRD+GL H LLGI + R+PK GASWEG+ LE L + Sbjct 237 HENLSKRQVKRSKLYIRDSGLFHTLLGI-TATDICRHPKCGASWEGYALENLIQSYGNDL 295 Query 353 L--YYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGE 410 Y+W T++ AELDL V + +G+E K + P I++SM AL DL+L L I+ PG Sbjct 296 YESYFWATEKGAELDLLVIKGDQRFGYEFKYSEAPKITKSMHIALEDLKLDHLTIITPGA 355 Query 411 HRFPLSDTV 419 +PLS+ V Sbjct 356 RSYPLSEHV 364 >gi|298530092|ref|ZP_07017494.1| AAA family ATPase [Desulfonatronospira thiodismutans ASO3-1] gi|298509466|gb|EFI33370.1| AAA family ATPase [Desulfonatronospira thiodismutans ASO3-1] Length=402 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 176/386 (46%), Positives = 233/386 (61%), Gaps = 8/386 (2%) Query 44 SAPTARISCMLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAE 103 S +S +I R R+ R + PV + G RQ GKTT++ G + FD E Sbjct 6 SRQQHNMSQTVIPRAIDLHRITRLMEIFPVTAILGARQCGKTTMA---GFFHADHLFDLE 62 Query 104 NPVDATRLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDL 163 NP D RL P LAL L+GL+ IDE QR+PDLFP+LR LVD + ++LILGSAS +L Sbjct 63 NPRDMARLETPQLALEELTGLVVIDEIQRLPDLFPLLRHLVD-TIPDQKYLILGSASREL 121 Query 164 VGLASESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYIT 223 + SESLAGR+ L L L DV SS+ LWLRGG P + A+ + + W + YIT Sbjct 122 LRQGSESLAGRMGLYHLGCLHTLDVTSSSD--LWLRGGYPRALLAKDDFSAFLWLENYIT 179 Query 224 TFLERDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDA 283 FLE+D+ LG+ IPA T+RR W+ML+HYHGQL + +EL+ S ++ TAR+YLD L Sbjct 180 AFLEQDIPALGIVIPARTLRRFWSMLSHYHGQLLNYSELSTSFGISDMTARKYLDILAGT 239 Query 284 LVVRQLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQ 343 +VR L PW N+ KR + PK+YIRD+GL H L+GID L +PKLGASWEGF LE Sbjct 240 FMVRTLQPWHPNVSKRLVKRPKLYIRDSGLFHSLMGIDSMDTLLGHPKLGASWEGFALEN 299 Query 344 LAALLAPN--PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLA 401 + L + L ++RT AELDL+ + GR +G E K P ++SM DL LA Sbjct 300 VCFCLGKHDQELAFYRTHGGAELDLFWKHGGRNWGVEFKFADAPRKTKSMDVVRKDLDLA 359 Query 402 RLAIVYPGEHRFPLSDTVVAVPADQI 427 L +VYPG R+ LS+ + +P I Sbjct 360 HLWVVYPGRDRYRLSEDITVLPLRDI 385 >gi|344925446|ref|ZP_08778907.1| ATPase [Candidatus Odyssella thessalonicensis L13] Length=387 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 176/381 (47%), Positives = 232/381 (61%), Gaps = 7/381 (1%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECT--FDAENPVDATR 110 M I R R++ + L GPRQ GKTTL++ + P FD ENP+ R Sbjct 1 MHIGRNKLLTRIKEEFEIHQICALLGPRQCGKTTLAKELAHHFPTSVHFFDCENPLHLAR 60 Query 111 LADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASES 170 L P++ L GLI IDE QR PDLFP+LRVLVD +FLI GSAS DL+ +SE+ Sbjct 61 LDSPLITFQNLEGLIVIDEVQRRPDLFPILRVLVDED-KTKQFLITGSASRDLIHQSSET 119 Query 171 LAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDL 230 LAGR+ +++ ++ +VG ++LWLRGG P S+ A S + S WRD YI TFLERDL Sbjct 120 LAGRIGYHQITPFSLDEVGE--WNKLWLRGGFPKSYLASSTKLSIRWRDEYILTFLERDL 177 Query 231 AQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLT 290 A LG I + + W MLAH HGQ + +L+RSLD+ Q T ++YL L A ++ L Sbjct 178 AALGFNITPYLIGKLWRMLAHVHGQTLNYHDLSRSLDIDQRTIKKYLQILEGAFMITLLK 237 Query 291 PWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALL-A 349 PW +N+ KR+ R+PKIYIRDTGLLHRLL + D +E +P+LGAS+EGF +EQL A Sbjct 238 PWHSNLSKREVRAPKIYIRDTGLLHRLLLLADD-NIENHPRLGASYEGFAIEQLLRRFNA 296 Query 350 PNPLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPG 409 Y+W T AELDL + + GFEIK T +P I++SM AL LQL L I+ P Sbjct 297 YQDSYFWATHNGAELDLLINHENKKLGFEIKFTDSPKITKSMHLALEGLQLDHLFIIIPQ 356 Query 410 EHRFPLSDTVVAVPADQILTT 430 + FPLS+ V V + I +T Sbjct 357 KEYFPLSNKVTCVGIENIFST 377 >gi|91204920|ref|YP_537275.1| ATPase [Rickettsia bellii RML369-C] gi|157827752|ref|YP_001496816.1| ATPase [Rickettsia bellii OSU 85-389] gi|91068464|gb|ABE04186.1| Putative AAA+ superfamily ATPase [Rickettsia bellii RML369-C] gi|157803056|gb|ABV79779.1| Putative AAA+ superfamily ATPase [Rickettsia bellii OSU 85-389] Length=379 Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 160/379 (43%), Positives = 226/379 (60%), Gaps = 8/379 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTF-DAENPVDATRLA 112 +IER + +++ +V L GPRQ GKTTL+R + F D E+ D L Sbjct 4 IIERPNYLEKIKIQFLSHKIVALLGPRQCGKTTLARQFAHGHQDVHFFDLEDIRDLAALE 63 Query 113 DPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLA 172 +P + L GLI IDE QR+P+LFP LRVL D+ + +FLILGSAS DL+ +SE+LA Sbjct 64 NPYITLENKKGLIIIDEIQRLPNLFPTLRVLTDKNI-EQQFLILGSASRDLIRQSSETLA 122 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GR+ +E+ ++ +V + +L L GG P + E W + YI TFLERD+ Sbjct 123 GRISYIEVHPFSLLEVNN--IKQLHLFGGFPNCYLYP--ETGFDWLEQYIRTFLERDIPN 178 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 LG IP T+RR WTMLAHYHG +F+ +E+ +SL ++ T + YLD L+ ++RQL PW Sbjct 179 LGFLIPPITLRRFWTMLAHYHGNIFNASEIGKSLGISDHTIKNYLDILSGTFMIRQLYPW 238 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAP-- 350 F NI KRQ++ PKIY D+G+ H L+ I + L +NPKLGAS+EGF LEQ+ L Sbjct 239 FENISKRQKKRPKIYFTDSGIFHHLIDIYSQEQLLKNPKLGASFEGFALEQIIRLFDKRS 298 Query 351 NPLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGE 410 YYW Q+ ELDL+++ G GFE K + P+++ SM A+ L L L ++YPG Sbjct 299 EDCYYWGIHQEGELDLFIKHKGLKLGFEFKFSDAPTLTPSMHKAIQYLALDELFVIYPGT 358 Query 411 HRFPLSDTVVAVPADQILT 429 ++ L + VP I+T Sbjct 359 KKYQLERNITVVPIKDIIT 377 >gi|229587034|ref|YP_002845535.1| Putative AAA+ superfamily ATPase [Rickettsia africae ESF-5] gi|228022084|gb|ACP53792.1| Putative AAA+ superfamily ATPase [Rickettsia africae ESF-5] Length=380 Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 163/374 (44%), Positives = 226/374 (61%), Gaps = 10/374 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPE----CTFDAENPVDAT 109 +I+R + AL P+ + GPRQ GKTTL+ K E FD E+P Sbjct 1 MIDRNYYLTHITSALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLD 60 Query 110 RLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASE 169 + + L L+GLI IDE QR P++FP LRVL D +FLILGSAS +L+ +SE Sbjct 61 QFKNLKTTLEPLNGLIVIDEIQRQPEIFPYLRVLADYS--NKKFLILGSASGELLRQSSE 118 Query 170 SLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERD 229 SLAGR+E +EL+ + ++ LWLRGG P S+ A++ S WR+ YIT+F+ERD Sbjct 119 SLAGRIEYMELTPFNLIEIND--FRELWLRGGFPKSYLAKNYVQSLRWRNSYITSFIERD 176 Query 230 LAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQL 289 L LG+ + A MR+ W MLAH HGQL + +EL RSL + T +RY + L ++R L Sbjct 177 LPSLGISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLL 236 Query 290 TPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA 349 PW+ NI KRQ ++PK+YIRD+G+LH LLGI + +PK G S+EGFV+E+L Sbjct 237 KPWYENISKRQVKAPKVYIRDSGILHALLGIHEH-DWYVHPKRGLSFEGFVIEELIRKFK 295 Query 350 PNPLY-YWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYP 408 + Y +WRTQ AELDL + +G+ YGFE+K PSI++SM + L DLQL L IV Sbjct 296 TDAEYFFWRTQTGAELDLLIIKNGKKYGFEVKNADAPSITKSMYAVLADLQLEHLYIVTA 355 Query 409 GEHRFPLSDTVVAV 422 G + + ++ + V Sbjct 356 GNNTYTKTEKISVV 369 >gi|91205065|ref|YP_537420.1| ATPase [Rickettsia bellii RML369-C] gi|157827637|ref|YP_001496701.1| ATPase [Rickettsia bellii OSU 85-389] gi|91068609|gb|ABE04331.1| Putative AAA+ superfamily ATPase [Rickettsia bellii RML369-C] gi|157802941|gb|ABV79664.1| Putative AAA+ superfamily ATPase [Rickettsia bellii OSU 85-389] Length=378 Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 160/372 (44%), Positives = 228/372 (62%), Gaps = 8/372 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECT--FDAENPVDATRL 111 +IER ++ + + P+ + GPRQ GKTTL+ K + FD E+P +L Sbjct 1 MIERNYYLEYIKDSFYIFPICAILGPRQCGKTTLAHSYIKQLNDKNYFFDLEDPSHLDQL 60 Query 112 ADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESL 171 +P L L GLI IDE QR P+LFP LRVL D +FLILGSAS +L+ +SESL Sbjct 61 KNPKATLDPLDGLIVIDEIQRQPELFPYLRVLADYS--NKKFLILGSASGELLRQSSESL 118 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGR+E EL+ + ++ + LWLRGG P S+ A++++ S WR+ YIT+F+ERDL Sbjct 119 AGRIEYTELTPFNLTEI--TDFKELWLRGGFPKSYLAKNHDLSLRWRNSYITSFIERDLP 176 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 LG+ + MR+ W MLAH HGQL + +EL RSL + T RRY + L ++R L P Sbjct 177 TLGITLNPHLMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIRRYTEILEQTFMIRLLKP 236 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN 351 W NI KRQ ++PK+YIRD+G+LH LLG+++ +PK G S+EGFV+E+L + Sbjct 237 WHENISKRQVKAPKVYIRDSGILHALLGVNEN-DWYVHPKRGLSFEGFVIEELIRKFKID 295 Query 352 -PLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGE 410 ++WRTQ AELDL + +G+ YGFE+K + P I++SM AL DL+L L +V G+ Sbjct 296 AECFFWRTQTGAELDLLIIKNGKKYGFEVKNSDAPDITKSMHIALTDLKLEHLYVVTSGD 355 Query 411 HRFPLSDTVVAV 422 + D + + Sbjct 356 STYKKLDNITVI 367 >gi|67458639|ref|YP_246263.1| ATPase [Rickettsia felis URRWXCal2] gi|67004172|gb|AAY61098.1| Predicted ATPase [Rickettsia felis URRWXCal2] Length=380 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/379 (43%), Positives = 226/379 (60%), Gaps = 10/379 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPE----CTFDAENPVDAT 109 +IER ++ + P+ + GPRQ GKTTL+ K E FD E+P Sbjct 1 MIERDYYLTHIKDSFEIFPICAILGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLD 60 Query 110 RLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASE 169 + + L L+GLI IDE QR P++FP LRVL D +FLILGSAS +L+ +SE Sbjct 61 QFKNLKTTLEPLNGLIVIDEIQRQPEIFPYLRVLADYS--NKKFLILGSASGELLRQSSE 118 Query 170 SLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERD 229 SLAGR+E EL+ + ++ LWLRGG P S+ A++ S WR+ YIT+F+ERD Sbjct 119 SLAGRIEYTELTPFNLIEINDFR--ELWLRGGFPKSYLAKNYVQSLRWRNSYITSFIERD 176 Query 230 LAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQL 289 L LG+ + A MR+ W MLAH HGQL + +EL RSL + T +RY + L ++R L Sbjct 177 LPSLGISLNAHVMRQLWLMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLL 236 Query 290 TPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA 349 PW+ NI K Q ++PK+YIRD+G+LH LLGI + +PK G S+EGFV+E+L Sbjct 237 KPWYENISKHQVKAPKVYIRDSGILHALLGIHEH-DWYVHPKRGLSFEGFVIEELIRKFK 295 Query 350 PNPLY-YWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYP 408 + Y +WRTQ AELDL + +G+ YGFE+K PSI++SM + L DLQL L IV Sbjct 296 TDAEYFFWRTQTGAELDLLIIKNGKKYGFEVKNADAPSITKSMYTVLADLQLEHLYIVTA 355 Query 409 GEHRFPLSDTVVAVPADQI 427 G + + ++ + V + + Sbjct 356 GNNTYKKTEKISVVGIENL 374 >gi|15892954|ref|NP_360668.1| hypothetical protein RC1031 [Rickettsia conorii str. Malish 7] gi|15620148|gb|AAL03569.1| unknown [Rickettsia conorii str. Malish 7] Length=380 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 162/374 (44%), Positives = 225/374 (61%), Gaps = 10/374 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPE----CTFDAENPVDAT 109 +I+R + AL P+ + GPRQ GKTTL+ K E FD E+P Sbjct 1 MIDRNYYLTHITGALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLD 60 Query 110 RLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASE 169 + + L L+GLI IDE QR P++FP LRVL D +FLILGSAS +L+ +SE Sbjct 61 QFKNLKTTLEPLNGLIVIDEIQRQPEIFPYLRVLADYS--NKKFLILGSASGELLRQSSE 118 Query 170 SLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERD 229 SLAGR+E +EL+ + ++ LWLRGG P S+ A++ S WR+ YIT+F+E D Sbjct 119 SLAGRIEYMELTPFNLIEIND--FRELWLRGGFPKSYLAKNYVQSLRWRNSYITSFIECD 176 Query 230 LAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQL 289 L LG+ + A MR+ W MLAH HGQL + +EL RSL + T +RY + L ++R L Sbjct 177 LPSLGISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLL 236 Query 290 TPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA 349 PW+ NI KRQ ++PK+YIRD+G+LH LLGI + +PK G S+EGFV+E+L Sbjct 237 KPWYENISKRQVKAPKVYIRDSGILHALLGIHEH-DWYVHPKRGLSFEGFVIEELIRKFK 295 Query 350 PNPLY-YWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYP 408 + Y +WRTQ AELDL + +G+ YGFE+K PSI++SM + L DLQL L IV Sbjct 296 TDAEYFFWRTQTGAELDLLIIKNGKKYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTA 355 Query 409 GEHRFPLSDTVVAV 422 G + + ++ + V Sbjct 356 GNNTYKKTEKISVV 369 >gi|34581349|ref|ZP_00142829.1| hypothetical protein [Rickettsia sibirica 246] gi|28262734|gb|EAA26238.1| unknown [Rickettsia sibirica 246] Length=358 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 156/352 (45%), Positives = 216/352 (62%), Gaps = 10/352 (2%) Query 76 LTGPRQAGKTTLSRLVGKSAPE----CTFDAENPVDATRLADPMLALSGLSGLITIDEAQ 131 + GPRQ GKTTL+ K E FD E+P + + L L+GLI IDE Q Sbjct 1 MLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLDQFKNLKTTLEPLNGLIVIDEIQ 60 Query 132 RIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVELSGLTVRDVGSS 191 R P++FP LR+L D +FLILGSAS +L+ +SESLA R+E +EL+ + ++ Sbjct 61 RQPEMFPYLRILADYS--NKKFLILGSASGELLRQSSESLASRIEYMELTPFNLIEIND- 117 Query 192 AADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAATMRRAWTMLAH 251 LWLRGG P S+ A++ S WR+ YIT+F+ERDL LG+ + A MR+ W MLAH Sbjct 118 -FRELWLRGGFPKSYLAKNYVQSLRWRNSYITSFIERDLPSLGISLNAHVMRQLWMMLAH 176 Query 252 YHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQRRSPKIYIRDT 311 HGQL + +EL RSL + T +RY + L ++R L PW+ NI KRQ ++PK+YIRD+ Sbjct 177 NHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLLKPWYENISKRQVKAPKVYIRDS 236 Query 312 GLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLY-YWRTQQDAELDLYVEL 370 G+LH LLGI + +PK G S+EGFV+E+L + Y +WRTQ AELDL + Sbjct 237 GILHALLGIHEH-DWYVHPKRGLSFEGFVIEELIRKFKMDAEYFFWRTQTGAELDLLIIK 295 Query 371 SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVVAV 422 +G+ YGFE+K PSI++SM + L DLQL L IV G + + ++ + V Sbjct 296 NGKKYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTAGNNTYKKTEKISVV 347 >gi|255035144|ref|YP_003085765.1| AAA ATPase [Dyadobacter fermentans DSM 18053] gi|254947900|gb|ACT92600.1| AAA ATPase [Dyadobacter fermentans DSM 18053] Length=394 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 167/385 (44%), Positives = 235/385 (62%), Gaps = 14/385 (3%) Query 58 RDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSA-PECTF-DAENPVDATRLADPM 115 R A + L P V + GPRQ GKTTL+ LV +S P+ + D ENP+D +L P Sbjct 4 RIAKEEIDELLDNFPAVGVLGPRQIGKTTLAELVAESLDPKPIYLDLENPLDLAKLNAPE 63 Query 116 LALSGLSG-LITIDEAQRIPDLFPVLRVLVDR----PVMPARFLILGSASPDLVGLASES 170 + G LI +DE R+P+LFPVLR ++DR + +FLILGSAS DL+ +SE+ Sbjct 64 VYFEAHKGSLIILDEVHRVPELFPVLRGVIDRRRKEGLRSRQFLILGSASLDLLRQSSET 123 Query 171 LAGRVELVELSGLTVRDV---GSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLE 227 LAGR+ ELSG + ++ G A D+LWLRGG P SF ++++ +S WR +I T+LE Sbjct 124 LAGRIAYRELSGFVINEIEETGPGAQDKLWLRGGFPDSFLSKNDVNSFRWRLNFINTYLE 183 Query 228 RDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVR 287 RD+ Q G RIP +RR WTMLAH+ G + A+L+ SLD+A T +RY++ L D ++R Sbjct 184 RDIPQFGPRIPTVLLRRLWTMLAHHQGGQLNTAQLSSSLDIALPTVKRYVELLEDLFLIR 243 Query 288 QLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAAL 347 L PW N+GKR ++PK+YIRD+GL H LL + L +P G SWEGFV+E L A Sbjct 244 TLRPWSGNVGKRLVKTPKVYIRDSGLTHALLNLATYDDLLGHPVSGNSWEGFVIENLMAA 303 Query 348 --LAPNPLYYWRTQQDAELDLYVELSGRP-YGFEIKRTSTPSISRSMRSALVDLQLARLA 404 + P YY RT AE+DL +E + Y EIKR+ +P++S+ D+ + Sbjct 304 VPMGMTPWYY-RTSAGAEIDLVLERGPKERYAIEIKRSLSPALSKGFYLGCEDIGAEKRF 362 Query 405 IVYPGEHRFPLSDTVVAVPADQILT 429 +VYPG+ RFPL+ V A+P ++T Sbjct 363 LVYPGKERFPLAKDVTAIPLADMVT 387 >gi|78187768|ref|YP_375811.1| hypothetical protein Plut_1926 [Chlorobium luteolum DSM 273] gi|78167670|gb|ABB24768.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length=350 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 161/336 (48%), Positives = 213/336 (64%), Gaps = 8/336 (2%) Query 100 FDAENPVDATRLADPMLALSGLSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSA 159 FD E+P D RL+DP L L+GL+ +DE Q DLFP+LRVL DR +PARFLILGSA Sbjct 4 FDLEDPDDQARLSDPSFVLRPLTGLVVLDEIQLRLDLFPLLRVLSDREELPARFLILGSA 63 Query 160 SPDLVGLASESLAGRVELVELSGLTVRDVGSSAA-----DRLWLRGGLPPSFTARSNEDS 214 +P+L+ SESLAGRV EL GL + + +AA D WLRGGLP + A N S Sbjct 64 APELLKQTSESLAGRVAFHELDGLGLDEYAPAAAKSDWLDDRWLRGGLPSALLALDNAGS 123 Query 215 AAWRDGYITTFLERDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTAR 274 WR+ +I T+LERDL QLG+ +PA T+RR WTMLAHYH + +SG+EL RSL V+ T Sbjct 124 LEWRESFIRTYLERDLPQLGINLPALTLRRFWTMLAHYHARTWSGSELGRSLGVSDKTVG 183 Query 275 RYLDALTDALVVRQLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGA 334 RYLD L + +L PW AN GKR+ RSPK+Y+ DTG+LH LL I R L +PK GA Sbjct 184 RYLDILEGTFMAFRLLPWHANTGKREVRSPKVYVADTGILHSLLKIGGRDDLLAHPKCGA 243 Query 335 SWEGFVLEQLA--ALLAPNPLYYWRTQQDAELDLYVELSGRPYGFEIKRTSTPSISRSMR 392 SWEGF++++L ++W A LDL + + + GFEIK T +P ++ SMR Sbjct 244 SWEGFMVQELIRRTHAECGEAFFWGLHAGAGLDLLIVKNAQRVGFEIKLTRSPQVTLSMR 303 Query 393 SALVDLQLARLAIVYPGEHR-FPLSDTVVAVPADQI 427 AL L+L RL ++ E + +++ + AVPA + Sbjct 304 RALKTLELDRLFVMCHAEGEPWAMAEGIDAVPASML 339 >gi|338849124|gb|AEJ27335.1| Hypothetical protein PDI_1002 [Paracoccus denitrificans SD1] Length=390 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 179/385 (47%), Positives = 236/385 (62%), Gaps = 14/385 (3%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 MLIERR A ++ L +P V L GPRQ GKTTL++ +G+ P D E+ D +L+ Sbjct 1 MLIERR-ITATVKSLLDDSPAVALLGPRQVGKTTLAQELGEERPSLYLDLESSADRAKLS 59 Query 113 DPMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRP----VMPARFLILGSASPDLVGLA 167 DP L LS L+ +DE QR+PDLF LR L+DR + RFL+LGSAS DL+ + Sbjct 60 DPELYLSAHEDKLVILDEVQRVPDLFQSLRGLIDRGRRKGLRAGRFLLLGSASIDLLRQS 119 Query 168 SESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLE 227 E+LAGR+ EL+ L +V ++ DRLWLRGG P SF AR ++ S WR +I T+LE Sbjct 120 GETLAGRIAYAELAPLDALEVPAADLDRLWLRGGFPDSFLARDDQASLRWRRDFIRTYLE 179 Query 228 RDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVR 287 RD+ LG RI A T+RR WTMLAH L + AELAR+L VA T YLD L D ++VR Sbjct 180 RDIPALGPRIAAETLRRFWTMLAHRQSGLSNAAELARALGVAAKTVASYLDLLVDLMLVR 239 Query 288 QLTPWFANIGKRQRRSPKIYIRDTGLLHRLLG---IDDRLALERNPKLGASWEGFVLEQL 344 +L PW ANIGKR +SP+IY+RDTG+LH LLG +DD L +P GASWEG ++E Sbjct 240 RLEPWHANIGKRLVKSPRIYVRDTGILHALLGLTTLDDVLG---HPVAGASWEGLIIETA 296 Query 345 AALL-APNPLYYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLAR 402 A++ A ++R+ AE+DL + L G + E+KR P + R SA DLQ AR Sbjct 297 HAVMPAGTQAQFYRSGAGAEVDLVLTLPGGAVWAVEVKRNLAPKVERGFHSACEDLQPAR 356 Query 403 LAIVYPGEHRFPLSDTVVAVPADQI 427 +VYPG+ FPL + + Q Sbjct 357 RIVVYPGDEAFPLPSGIEVMSLHQF 381 >gi|119385126|ref|YP_916182.1| hypothetical protein Pden_2398 [Paracoccus denitrificans PD1222] gi|119374893|gb|ABL70486.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length=390 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 178/385 (47%), Positives = 233/385 (61%), Gaps = 14/385 (3%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 MLIERR L+ L +P V L GPRQ GKTTL++ +G P D E+ D RL+ Sbjct 1 MLIERR-ITNTLKFLLDDSPAVALLGPRQVGKTTLAQELGDERPSLYLDLESSADGARLS 59 Query 113 DPMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRP----VMPARFLILGSASPDLVGLA 167 DP L LS L+ +DE QR+PDLF LR L+DR + RFL+LGSAS DL+ + Sbjct 60 DPELYLSAHEDKLVILDEVQRVPDLFQNLRGLIDRGRRKGLRAGRFLLLGSASIDLLRQS 119 Query 168 SESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLE 227 E+LAGR+ EL+ L +V ++ DRLWLRGG P SF A+ ++ S WR +I T+LE Sbjct 120 GETLAGRIAYAELAPLDALEVPAADLDRLWLRGGFPDSFLAKGDQASLRWRRDFIRTYLE 179 Query 228 RDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVR 287 RD+ LG RI A T+RR WTMLAH L + AELAR+L V T YLD L D ++VR Sbjct 180 RDIPALGPRIAAETLRRFWTMLAHRQSGLSNAAELARALGVDAKTVASYLDLLVDLMLVR 239 Query 288 QLTPWFANIGKRQRRSPKIYIRDTGLLHRLLG---IDDRLALERNPKLGASWEGFVLEQL 344 +L PW ANIGKR +SP+IY+RDTG+LH LLG +DD L +P GASWEG ++E Sbjct 240 RLEPWHANIGKRLVKSPRIYVRDTGILHALLGLTTLDDVLG---HPVAGASWEGLIIETA 296 Query 345 AALL-APNPLYYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLAR 402 AL+ ++R+ AE+DL + L G + E+KR P + R SA DLQ AR Sbjct 297 HALMPEETQAQFYRSGAGAEVDLVLTLPGGAVWAVEVKRNLAPKVERGFHSACEDLQPAR 356 Query 403 LAIVYPGEHRFPLSDTVVAVPADQI 427 +VYPG+ FPL + + + Q Sbjct 357 RIVVYPGDEAFPLPNGIEVMSLHQF 381 >gi|325982591|ref|YP_004294993.1| hypothetical protein NAL212_1994 [Nitrosomonas sp. AL212] gi|325532110|gb|ADZ26831.1| hypothetical protein NAL212_1994 [Nitrosomonas sp. AL212] Length=388 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 167/382 (44%), Positives = 225/382 (59%), Gaps = 9/382 (2%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPML 116 RR+ L+ L+ P V L GPRQ GKTTL+ V K D E+ D +L P Sbjct 3 RREKYTELKDLLNTFPAVALLGPRQVGKTTLALEVAKDFASVYLDLESEEDRAKLTSPAY 62 Query 117 ALSGLS-GLITIDEAQRIPDLFPVLRVLVDRP----VMPARFLILGSASPDLVGLASESL 171 L L+ +DE QRIP +F LR ++D+ +FL LGSAS DL+ + E+L Sbjct 63 YLENHQDKLVILDEVQRIPGIFQELRGIIDKNRRAGHSTGQFLFLGSASIDLLKQSGETL 122 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGR+ ELS +TV + DRLWLRGG P S A S++ S WR +I T+LERD+ Sbjct 123 AGRIAYCELSPITVTEYPEDM-DRLWLRGGFPDSLLASSDKKSLLWRHNFIRTYLERDIP 181 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 QLG RIPA T+RR W MLAH G L + + +A SL V T YLD + D L+VR+LTP Sbjct 182 QLGPRIPAETLRRFWMMLAHLQGSLLNASHIAASLGVDSKTIMSYLDLMVDLLLVRRLTP 241 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN 351 + N+GKR +SPK+YIRD+GLLH LLGID++ L +P +G SWEGFV+E + + + Sbjct 242 LYKNLGKRLIKSPKVYIRDSGLLHALLGIDNKETLIGHPAIGMSWEGFVIENIQNTIDQD 301 Query 352 --PLYYWRTQQDAELDLYVELSGRP-YGFEIKRTSTPSISRSMRSALVDLQLARLAIVYP 408 LY++RT E+DL +E S + EIKRT P ++ R A D+ ++ I+YP Sbjct 302 QTKLYFYRTSSGNEVDLVLEKSSHEIWTIEIKRTFAPQFTKGQRLASQDIAASKNFIIYP 361 Query 409 GEHRFPLSDTVVAVPADQILTT 430 G RFPL++ AV + L T Sbjct 362 GAERFPLTENTEAVGLAEFLNT 383 >gi|298529844|ref|ZP_07017247.1| AAA ATPase [Desulfonatronospira thiodismutans ASO3-1] gi|298511280|gb|EFI35183.1| AAA ATPase [Desulfonatronospira thiodismutans ASO3-1] Length=394 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 168/378 (45%), Positives = 225/378 (60%), Gaps = 15/378 (3%) Query 64 LRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSGLSG 123 ++ AL R V L GPRQ GKTTL+ +G + P D ENP D +L +P+L LS Sbjct 10 IQSALQRQAAVALMGPRQVGKTTLALTLGNTLPSLYLDLENPADRQKLTEPVLFLSRYED 69 Query 124 -LITIDEAQRIPDLFPVLRVLVDRP----VMPARFLILGSASPDLVGLASESLAGRVELV 178 L+ +DE R P+LF LR ++D RFL+LGSAS DL+ + ESLAGR+ V Sbjct 70 QLVILDEIHRTPELFQSLRGIIDSGRRAGKRTGRFLLLGSASVDLLRQSGESLAGRIAYV 129 Query 179 ELSGLTVRDVGSSAAD--RLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVR 236 ++S L V +V + LW+RGG P SF A N S A R +I T+LERD+ G R Sbjct 130 DMSPLDVLEVADDSRKLFDLWIRGGFPDSFLADDNASSLALRRDFIRTYLERDIPIFGPR 189 Query 237 IPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANI 296 +PA TM R WTMLAH G L + + LA SL V+ T RY+D L D L+VR+L P+ AN+ Sbjct 190 LPAQTMERLWTMLAHVQGSLLNASRLAASLGVSSQTVTRYIDLLADLLLVRRLAPFHANL 249 Query 297 GKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPL--- 353 GKR +SPK+YIRD+GLLH LL I D L +P GASWEGFV+E +LA P+ Sbjct 250 GKRLVKSPKVYIRDSGLLHALLDISDYNELAGHPVAGASWEGFVIEN---ILAAAPIRTR 306 Query 354 -YYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEH 411 ++RT AE+DL + L G + EIK + +P + + A DL+ +R VYPG+ Sbjct 307 ASFFRTSAGAEIDLLLRLPGGELWAVEIKNSLSPRLEKGFHLAHADLKPSRSFAVYPGKD 366 Query 412 RFPLSDTVVAVPADQILT 429 R+PL+ V A+ +I T Sbjct 367 RYPLNKNVDAISLLEICT 384 >gi|94263487|ref|ZP_01287299.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456125|gb|EAT06268.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length=388 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 179/377 (48%), Positives = 236/377 (63%), Gaps = 10/377 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLAD 113 +I+RR + L+ L + P V L GPRQ GKTTL+ +V + P D E P D +L+D Sbjct 1 MIKRR-LSPLLQNRLAQFPAVALLGPRQVGKTTLADMVAREIPAIYLDLEAPADRDKLSD 59 Query 114 PMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLILGSASPDLVGLAS 168 P L LSG L+ +DE QRIP LF LR L+D+ R FL+LGSAS DL+ + Sbjct 60 PALYLSGHQDKLVILDEVQRIPALFEALRGLIDQGRRQGRGSGRFLLLGSASLDLLRQSG 119 Query 169 ESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLER 228 ESLAGR+ +ELS L V++V + + LWLRGG P SF A + S WR+ +I T+LER Sbjct 120 ESLAGRIAYIELSPLDVQEVEAGEQETLWLRGGFPESFLAADDRLSLVWRENFIRTYLER 179 Query 229 DLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQ 288 D+ QLG RIPA T+RR WTMLAH L + A+LAR L V T RYLD L D L+VR+ Sbjct 180 DIPQLGPRIPAETLRRFWTMLAHGQSTLLNAAQLARGLAVDGKTIARYLDLLVDLLLVRR 239 Query 289 LTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALL 348 LTP ANIGKR +SPKI++RD+G++H LLGI++R AL +P G SWEGFV+E L Sbjct 240 LTPQHANIGKRLIKSPKIFVRDSGIVHALLGIENREALLGHPIAGMSWEGFVVENLIN-A 298 Query 349 APNPLY--YWRTQQDAELDLYVELSGRP-YGFEIKRTSTPSISRSMRSALVDLQLARLAI 405 AP+ ++RT AE+DL +++ G + EIK TP + + A DL+ +R + Sbjct 299 APDRAVPSFFRTAAGAEIDLLLDIPGHGLWAIEIKSGLTPKLEKGFHQARADLRPSRSFV 358 Query 406 VYPGEHRFPLSDTVVAV 422 VY G RFPL D V A+ Sbjct 359 VYSGTERFPLRDGVEAI 375 >gi|255530980|ref|YP_003091352.1| ATPase AAA [Pedobacter heparinus DSM 2366] gi|255343964|gb|ACU03290.1| AAA ATPase [Pedobacter heparinus DSM 2366] Length=390 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/391 (41%), Positives = 238/391 (61%), Gaps = 17/391 (4%) Query 58 RDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLAD-PML 116 R ++ AL R+ V L GPRQ GKTT++ + + D E+ +D ++ D Sbjct 4 RRVEKQVEEALKRSASVALMGPRQVGKTTIAMNISDTTTAVYLDLEDSLDLQKIQDVSAF 63 Query 117 ALSGLSGLITIDEAQRIPDLFPVLRVLVD----RPVMPARFLILGSASPDLVGLASESLA 172 LI +DE QR+P++F LR ++D R +FL LGSAS DL+ +SESLA Sbjct 64 HEENRDHLIIMDEVQRVPEIFASLRGIIDKERRRGHKYGQFLFLGSASMDLLQQSSESLA 123 Query 173 GRVELVELSGLTVRDVGSSAA---DRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERD 229 GR+ +EL G+ + ++ A ++LWLRGG P S A S+++S AWR +I T+LERD Sbjct 124 GRIAYIELQGVDALEFKANNAENQNQLWLRGGFPESLLADSDKNSMAWRRDFIRTYLERD 183 Query 230 LAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQL 289 + LG RIPA T+ R WTMLAH G + + +++++SL+V TT RYLD + D L+VR+L Sbjct 184 IPLLGPRIPAVTLERFWTMLAHVQGGMTNASQISKSLEVTSTTVSRYLDLMVDLLLVRRL 243 Query 290 TPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLA 349 PW N+GKR ++PK+Y+RD+G+ H LL ++ L +P G SWEGFV+E + + +A Sbjct 244 QPWTQNVGKRLVKTPKVYVRDSGITHALLNLESYNDLLGHPVAGGSWEGFVIENILS-VA 302 Query 350 PNPL--YYWRTQQDAELDLYVELSGR-PYGFEIKRTSTPSISRSMRSALVDLQLARLAIV 406 PN + YY+RT AE+DL +E SG + EIKR S P++S+ A D+ ++ +V Sbjct 303 PNNVIPYYYRTSNGAEIDLVLEFSGNEKWAIEIKRNSAPTLSKGFHIACQDINPSKRFVV 362 Query 407 YPGEHRFPLSDTVVAVPADQILTTGSVDELL 437 Y G+ RFP+++ + A+ G ++ELL Sbjct 363 YSGQDRFPMAENITAIS-----LCGIMEELL 388 >gi|338214654|ref|YP_004658717.1| AAA ATPase [Runella slithyformis DSM 19594] gi|336308483|gb|AEI51585.1| AAA ATPase [Runella slithyformis DSM 19594] Length=391 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 170/380 (45%), Positives = 236/380 (63%), Gaps = 19/380 (5%) Query 58 RDAAARLRRALHRAPVVLLTGPRQAGKTTLSR-LVGKSAPECTF-DAENPVDATRLADPM 115 R A + + L P V + GPRQ GKTTL+ L P+ + D E+P D +L++P Sbjct 4 RKATLEIAQLLEEFPAVGVLGPRQVGKTTLAEELAAAMRPQPVYLDLESPKDRAKLSEPE 63 Query 116 LALS-GLSGLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLILGSASPDLVGLASES 170 L+ +DE QR+P+LF +LR ++DR R FLILGSAS DL+ +SES Sbjct 64 DYFELHQHQLVILDEIQRMPELFSILRGVIDRRRRQGRKAGQFLILGSASLDLLKQSSES 123 Query 171 LAGRVELVELSGLTVRDVGSSAADR--LWLRGGLPPSFTARSNEDSAAWRDGYITTFLER 228 LAGR+ ELSG V ++ ++AA R LWLRGG P SF A+S+ S WR +I T+LER Sbjct 124 LAGRIAYKELSGFNVSEIAATAATREQLWLRGGFPDSFLAKSDAGSLRWRLNFINTYLER 183 Query 229 DLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQ 288 D+ Q G RIPA T+RR WTMLAH G + A+L +LD+A TA+RY++ L D L++R Sbjct 184 DVPQFGPRIPAVTLRRLWTMLAHSQGGQLNTAQLGANLDIAAPTAKRYIELLEDLLLIRT 243 Query 289 LTPWFANIGKRQRRSPKIYIRDTGLLHRLLGI---DDRLALERNPKLGASWEGFVLEQLA 345 L PW NIGKR R+PK+YIRD+GL H LL + DD L +P +GASWEGFV+E L Sbjct 244 LRPWSGNIGKRLVRAPKVYIRDSGLTHALLNLTTLDDVLG---HPVVGASWEGFVMENLL 300 Query 346 ALLAPNPL--YYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLAR 402 ++L P+ + +++RT AE+ L +E S + Y EIKR+ PS+S+ D++ A+ Sbjct 301 SVL-PSGMTPWFYRTAAGAEIGLVIEKNSQQRYAIEIKRSQAPSVSKGFYLGCEDIEAAK 359 Query 403 LAIVYPGEHRFPLSDTVVAV 422 ++YPG +FP+ V AV Sbjct 360 RFVIYPGTEKFPILKNVTAV 379 >gi|119386540|ref|YP_917595.1| hypothetical protein Pden_3833 [Paracoccus denitrificans PD1222] gi|119377135|gb|ABL71899.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length=390 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 175/385 (46%), Positives = 234/385 (61%), Gaps = 14/385 (3%) Query 53 MLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLA 112 MLIERR A ++ L +P V L GPRQ GKTTL++ +G + P D E+ D RL+ Sbjct 1 MLIERR-ITATVKSLLDDSPAVALLGPRQVGKTTLAQELGDARPSLYLDLESSADRARLS 59 Query 113 DPMLAL-SGLSGLITIDEAQRIPDLFPVLRVLVDRP----VMPARFLILGSASPDLVGLA 167 DP L L + L+ +DE QR+PDLF LR L+DR + RFL+LGSAS DL+ + Sbjct 60 DPELYLLAHEDKLVILDEVQRVPDLFQNLRGLIDRGRRKGLRAGRFLLLGSASIDLLRQS 119 Query 168 SESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLE 227 E+LAGR+ EL+ L +V ++ DRLWLRGG P SF A+ ++ S WR +I T+LE Sbjct 120 GETLAGRIAYAELAPLDALEVPAADLDRLWLRGGFPDSFLAKGDQASLRWRRDFIRTYLE 179 Query 228 RDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVR 287 RD+ LG RI A T+RR WTMLAH L + AELAR+L V T YLD L D ++VR Sbjct 180 RDIPALGPRIAAETLRRFWTMLAHRQSGLSNAAELARALGVDAKTVASYLDLLVDLMLVR 239 Query 288 QLTPWFANIGKRQRRSPKIYIRDTGLLHRLLG---IDDRLALERNPKLGASWEGFVLEQL 344 +L PW ANIGKR +SP+IY+RDTG+LH LLG +DD L +P GASWEG ++E Sbjct 240 RLEPWHANIGKRLVKSPRIYVRDTGILHALLGLTTLDDVLG---HPVAGASWEGLIIETA 296 Query 345 AALL-APNPLYYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLAR 402 AL+ ++R+ AE+DL + L G + E+KR P + R SA DL+ R Sbjct 297 HALMPEGTQAQFYRSGAGAEVDLVLTLPGGAVWAVEVKRNLAPKVERGFHSACEDLKPER 356 Query 403 LAIVYPGEHRFPLSDTVVAVPADQI 427 +VYPG+ FPL + + + Q Sbjct 357 RIVVYPGDEAFPLPNGIEVMSLHQF 381 >gi|94263109|ref|ZP_01286927.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456480|gb|EAT06594.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length=388 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 178/377 (48%), Positives = 235/377 (63%), Gaps = 10/377 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLAD 113 +I+RR + L+ L + P V L GPRQ GKTTL+ +V + P D E P D +L+D Sbjct 1 MIKRR-LSPLLQNRLAQFPAVALLGPRQVGKTTLADMVAREIPAIYLDLEAPADRDKLSD 59 Query 114 PMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLILGSASPDLVGLAS 168 P L LSG L+ +DE QRIP LF LR L+D+ R FL+LGSAS DL+ + Sbjct 60 PALYLSGHQDKLVILDEVQRIPALFEALRGLIDQGRRQGRGSGRFLLLGSASLDLLRQSG 119 Query 169 ESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLER 228 ESLAGR+ +ELS L V++V + + LWLRGG P SF A + S WR+ +I T+LER Sbjct 120 ESLAGRIAYIELSPLDVQEVEAGEQETLWLRGGFPESFLAADDRLSLVWRENFIRTYLER 179 Query 229 DLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQ 288 D+ QLG RIPA T+RR WTMLAH L + A+LAR L V T RYLD L D L+VR+ Sbjct 180 DIPQLGPRIPAETLRRFWTMLAHGQSTLLNAAQLARGLAVDGKTIARYLDLLVDLLLVRR 239 Query 289 LTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALL 348 L P ANIGKR +SPKI++RD+G++H LLGI++R AL +P G SWEGFV+E L Sbjct 240 LMPRHANIGKRLIKSPKIFVRDSGIVHALLGIENREALLGHPIAGMSWEGFVVENLIN-A 298 Query 349 APNPLY--YWRTQQDAELDLYVELSGRP-YGFEIKRTSTPSISRSMRSALVDLQLARLAI 405 AP+ ++RT AE+DL +++ G + EIK TP + + A DL+ +R + Sbjct 299 APDRAVPSFFRTAAGAEIDLLLDIPGHGLWAIEIKSGLTPKLEKGFHQARADLRPSRSFV 358 Query 406 VYPGEHRFPLSDTVVAV 422 VY G RFPL D V A+ Sbjct 359 VYSGTERFPLRDGVEAI 375 >gi|78033461|emb|CAJ30077.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] gi|144901121|emb|CAM77985.1| conserved hypothetical protein, AAA ATPase domain [Magnetospirillum gryphiswaldense MSR-1] Length=410 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 171/388 (45%), Positives = 236/388 (61%), Gaps = 10/388 (2%) Query 50 ISCMLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDAT 109 I +IERR A + L R P V L GPRQ+GKTTL+ +G+S D E+P D Sbjct 17 IIARMIERRHRPA-IENLLQRHPAVALLGPRQSGKTTLALEIGESRQSIYLDLESPSDLA 75 Query 110 RLADPMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRPVMPA----RFLILGSASPDLV 164 +LA+P L L+ L+ +DE QR PDLF VLR L+D RFL+LGSAS +L+ Sbjct 76 KLAEPELYLAAHEDKLVILDEVQRAPDLFKVLRGLIDAGRRRGRRSDRFLLLGSASIELL 135 Query 165 GLASESLAGRVELVELSGLTVRDV--GSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYI 222 +SE+LAGR+ + EL+ ++V G DR WLRGG P SF A + DSA WR +I Sbjct 136 KQSSETLAGRIAMFELTPFDAQEVVKGIGDMDRHWLRGGFPDSFLAPDDRDSAEWRQAFI 195 Query 223 TTFLERDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTD 282 T+LERD+ QLG R+PA T+RR WTMLAH G L + A + + L VA T RYLD L D Sbjct 196 RTYLERDIPQLGPRVPAETLRRFWTMLAHEQGGLLNAARIGQGLGVAGVTVARYLDLLVD 255 Query 283 ALVVRQLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLE 342 L+VR+LTPW +N GKR +SP+I++RD+G++H LLG++ L +P G+SWEG+V+E Sbjct 256 LLLVRRLTPWMSNTGKRMVKSPRIFVRDSGIVHTLLGLETMEDLLGHPVAGSSWEGYVIE 315 Query 343 QLAALLAPNPLY-YWRTQQDAELDLYVELS-GRPYGFEIKRTSTPSISRSMRSALVDLQL 400 L N ++RT AE+DL + GR + EIKR+ +P S+ A D++ Sbjct 316 NLLVAAPDNAQAGFYRTSAGAEVDLILSTGPGRLWAIEIKRSLSPQPSKGFWLACDDIKP 375 Query 401 ARLAIVYPGEHRFPLSDTVVAVPADQIL 428 +VYPG R+PL D + A+ +++ Sbjct 376 DARFVVYPGTERYPLKDGLEAIGLTEMM 403 >gi|320449374|ref|YP_004201470.1| AAA ATPase [Thermus scotoductus SA-01] gi|320149543|gb|ADW20921.1| AAA ATPase [Thermus scotoductus SA-01] Length=400 Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 163/372 (44%), Positives = 226/372 (61%), Gaps = 7/372 (1%) Query 64 LRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALS-GLS 122 L L + PVV+LTG RQ GKTTL+ VG D E+ D +LA P L L L Sbjct 10 LEERLGQVPVVVLTGARQVGKTTLALAVGDRLGALYLDLESERDRGKLAAPGLYLEDHLD 69 Query 123 GLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLILGSASPDLVGLASESLAGRVELV 178 L+ +DE R+P+LFPVLR LVDR + +L+LGS SP++ A ESLAGR + Sbjct 70 RLVILDEVHRMPELFPVLRSLVDRARRRGKRSGLYLLLGSVSPEVSRQAGESLAGRASYL 129 Query 179 ELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIP 238 EL+ L +VG +RLWLRGG P SF A S+ S WR ++ T++ER++ LG R+P Sbjct 130 ELAPLDPLEVGPGELERLWLRGGFPESFLAPSDAQSLRWRQDFLRTYMEREIPALGGRLP 189 Query 239 AATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGK 298 A T+RR TMLAH G+ + LA +L + T RYLD L D ++R+L P+ AN+GK Sbjct 190 AETLRRLLTMLAHLQGETLHLSRLAGNLGLDGRTVSRYLDHLADLYLLRRLPPYEANVGK 249 Query 299 RQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPL-YYWR 357 R +SPK+Y+RD+GL+H LLGI DR +L +P +GASWEGFV+E L + L +++R Sbjct 250 RLVKSPKLYLRDSGLVHALLGIHDRESLLGHPVVGASWEGFVVENLLRVAPEGALGFFYR 309 Query 358 TQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLS 416 T AE+DL + +G + E+KR+ P SR AL DL+ +VYPGE +PL+ Sbjct 310 THAGAEIDLLLLFPTGTLWAVEVKRSLVPKPSRGFHQALADLRPQAAFVVYPGEEAYPLA 369 Query 417 DTVVAVPADQIL 428 + A P +++ Sbjct 370 PGIRATPLPELM 381 >gi|241518216|ref|YP_002978844.1| AAA ATPase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862629|gb|ACS60293.1| AAA ATPase [Rhizobium leguminosarum bv. trifolii WSM1325] Length=391 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 170/381 (45%), Positives = 229/381 (61%), Gaps = 8/381 (2%) Query 54 LIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLAD 113 +IERR + +L + +P V L GPRQ GKTTL+ + + P D E+ D +L + Sbjct 1 MIERR-ISTKLIELIDSSPAVGLIGPRQVGKTTLALAIAEQRPSIYLDLESDADRAKLTE 59 Query 114 PMLALSGLS-GLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLILGSASPDLVGLAS 168 P L LS S L+ +DE R+P+LF LR L+DR R FL+LGSAS DL+ + Sbjct 60 PELYLSQHSDKLVILDEVHRLPNLFQNLRGLIDRGRRNGRKAGHFLLLGSASIDLLKQSG 119 Query 169 ESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLER 228 E+LAGR+ +E+ + +V + LW+RGG P SF A S+ +S WR +I T+LER Sbjct 120 ETLAGRIAYLEMGPIDGLEVPVDDLNTLWVRGGFPDSFLAASDRESQRWRQDFIRTYLER 179 Query 229 DLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQ 288 D++ LG RIPA T+RR WTMLAH+ L + AE ARSL V T YLD L D L+VR+ Sbjct 180 DISLLGPRIPAETLRRFWTMLAHHQSGLLNAAEFARSLGVDGKTVASYLDLLVDLLLVRR 239 Query 289 LTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALL 348 L PW NIGKR +SP++Y+RD+G+ H LLG+ + L +P GASWEGFV+E L A Sbjct 240 LEPWHVNIGKRLVKSPRVYVRDSGITHTLLGLTTQEDLLGHPVAGASWEGFVIETLIAAA 299 Query 349 APNPL-YYWRTQQDAELDLYVELSG-RPYGFEIKRTSTPSISRSMRSALVDLQLARLAIV 406 P ++RT AE+DL + G RP+ EIKR+ TP + + A DL AR +V Sbjct 300 PPGTQSNFYRTSAGAEIDLLLTPPGERPWAIEIKRSLTPKLEKGFYLACEDLDPARRIVV 359 Query 407 YPGEHRFPLSDTVVAVPADQI 427 YPG+ FPL V A+P I Sbjct 360 YPGQEAFPLKHDVEAMPLASI 380 >gi|84503326|ref|ZP_01001404.1| hypothetical protein OB2597_18746 [Oceanicola batsensis HTCC2597] gi|84686697|ref|ZP_01014589.1| hypothetical protein 1099457000242_RB2654_00645 [Maritimibacter alkaliphilus HTCC2654] gi|84388380|gb|EAQ01330.1| hypothetical protein OB2597_18746 [Oceanicola batsensis HTCC2597] gi|84665371|gb|EAQ11849.1| hypothetical protein RB2654_00645 [Rhodobacterales bacterium HTCC2654] Length=387 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 166/377 (45%), Positives = 224/377 (60%), Gaps = 13/377 (3%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPML 116 +R ++ +L V+L GPRQ GKTTL+ + P D E D L +P L Sbjct 3 KRKTQQFVQSSLESQAAVVLLGPRQVGKTTLALDIASERPSVYLDLEREADRQILTEPDL 62 Query 117 ALSGLSG-LITIDEAQRIPDLFPVLRVLVDR----PVMPARFLILGSASPDLVGLASESL 171 L +G L+ +DE Q++PDLF LR +D+ +FL+LGSAS L+ +ESL Sbjct 63 YLDEQAGKLVILDEVQQMPDLFRTLRGQIDQRRRAGFRTGQFLLLGSASNILLHQTAESL 122 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGRV VE+ L +VG+ + LWLRGG P SF A S+ S WR ++ T+LERD+ Sbjct 123 AGRVRYVEMPPLQPDEVGADQLNLLWLRGGFPDSFQAASDRASMDWRLDFLRTYLERDIP 182 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 LG RIPAAT+RR WTMLAH G L + A LA L V+ T RYLD L D ++VR+L P Sbjct 183 ALGPRIPAATLRRFWTMLAHVQGGLLNAAALAEGLGVSGQTVGRYLDLLVDLMLVRRLQP 242 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN 351 W N+GKR +SPK+Y+RD+G++H LLGI L +P +G SWEGF +E ALLA Sbjct 243 WHENVGKRLVKSPKVYVRDSGIVHALLGIGTTEGLLGHPVVGGSWEGFCIE---ALLAAA 299 Query 352 PL----YYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIV 406 PL +++RT AELDL + L SG + EIKRT+ P +SR + D+ R +V Sbjct 300 PLGTEPFFYRTSAGAELDLVLRLPSGDIWAVEIKRTTAPKVSRGFHTGAEDIGANRKLLV 359 Query 407 YPGEHRFPLSDTVVAVP 423 Y GEH P++ + A+P Sbjct 360 YAGEHEVPVAKDIRALP 376 >gi|189346455|ref|YP_001942984.1| hypothetical protein Clim_0926 [Chlorobium limicola DSM 245] gi|189340602|gb|ACD90005.1| conserved hypothetical protein [Chlorobium limicola DSM 245] Length=402 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 172/388 (45%), Positives = 233/388 (61%), Gaps = 9/388 (2%) Query 42 EISAPTARISCMLIERRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFD 101 +I+ T++I+ M+ R L+ AL P V L GPRQ+GKTTL+ VGKS D Sbjct 2 QITESTSKITRMI--HRTLTRNLQDALEVYPAVALLGPRQSGKTTLALEVGKSFDALYLD 59 Query 102 AENPVDATRLADPMLALSG-LSGLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLIL 156 E+ D RLA+P L LS L L+ +DE R P LFPVLR L+DR R +L+L Sbjct 60 LESEQDRARLANPELYLSDHLERLVILDEVHRTPGLFPVLRGLIDRSRRAGRRSGLYLLL 119 Query 157 GSASPDLVGLASESLAGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAA 216 GSAS DL+ ESLAGR+ +EL+ T+ + G+ D+LW RGG P S A + S Sbjct 120 GSASLDLLKQTGESLAGRISYIELTPFTILEAGTGNVDKLWTRGGFPDSMLASTEPISFR 179 Query 217 WRDGYITTFLERDLAQLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRY 276 WR +I T+LERD+ Q G RI A T+RR WTMLA + G + + ++ +RSL + T Y Sbjct 180 WRQDFIRTYLERDIPQFGPRIAAETLRRFWTMLAWHQGGMVNMSQFSRSLGIDVKTVSNY 239 Query 277 LDALTDALVVRQLTPWFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASW 336 +D L D L+VR+L PW N GKR R+PK++IRD+GL H LLGI D+ L +P +G SW Sbjct 240 MDLLVDLLLVRRLPPWHENPGKRLVRTPKVFIRDSGLTHALLGIADKDMLLSHPVVGQSW 299 Query 337 EGFVLEQ-LAALLAPNPLYYWRTQQDAELD-LYVELSGRPYGFEIKRTSTPSISRSMRSA 394 E FV+E L + A Y++RT AE+D L V G+ + E+KR+ TP + R SA Sbjct 300 ECFVIENILDSAPADVQGYFYRTGGGAEIDLLLVWPDGKRWAVEVKRSLTPKLERGFHSA 359 Query 395 LVDLQLARLAIVYPGEHRFPLSDTVVAV 422 DL R +VYPG R+ +S+TV A+ Sbjct 360 HADLGPERSFVVYPGTERYRISETVEAI 387 >gi|159046286|ref|YP_001541958.1| hypothetical protein Dshi_3747 [Dinoroseobacter shibae DFL 12] gi|157914045|gb|ABV95477.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length=387 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 163/380 (43%), Positives = 227/380 (60%), Gaps = 13/380 (3%) Query 57 RRDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPML 116 +R ++ AL V+L GPRQ GKTTL+ + P D E D L +P L Sbjct 3 KRQTHHFVQSALESQAAVVLLGPRQVGKTTLALDIASEQPSVYLDLERDADRQILTEPDL 62 Query 117 ALSGLSG-LITIDEAQRIPDLFPVLRVLVDR----PVMPARFLILGSASPDLVGLASESL 171 L +G L+ +DE Q++P LF LR +D+ +FL+LGSAS L+ ++ESL Sbjct 63 YLDEQAGKLVILDEVQQMPGLFKSLRGQIDQRRRAGFRAGQFLLLGSASNVLLQQSAESL 122 Query 172 AGRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLA 231 AGRV +E+ L + +VG+ + LWLRGG P SF A S++ S WR ++ T+LERD+ Sbjct 123 AGRVRYIEMPPLQLTEVGADQLNALWLRGGFPDSFMASSDQASMDWRLDFLRTYLERDIP 182 Query 232 QLGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTP 291 LG RIPAAT+RR WTMLAH G L + A LA L V+ T RYLD L D ++VR+L P Sbjct 183 ALGPRIPAATLRRFWTMLAHVQGGLLNAAALAEGLGVSGQTIGRYLDLLVDLMLVRRLQP 242 Query 292 WFANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN 351 W N+GKR +SPK+Y+RD+G++H LL I L +P +G SWEGF +E ALLA Sbjct 243 WHENVGKRLVKSPKVYVRDSGVVHALLSIGTIEGLLGHPVVGGSWEGFCIE---ALLAAA 299 Query 352 PL----YYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIV 406 P +++RT AELDL + L G + EIKRT+ P +SR D++ +R ++ Sbjct 300 PTGTEPFFYRTSAGAELDLVLRLPGGDIWAVEIKRTTAPKVSRGFYVGAEDIKASRKLLI 359 Query 407 YPGEHRFPLSDTVVAVPADQ 426 Y GEH P+++ V A+P +Q Sbjct 360 YAGEHDVPVAEGVRAMPLEQ 379 >gi|149204538|ref|ZP_01881504.1| hypothetical protein RTM1035_00450 [Roseovarius sp. TM1035] gi|149142037|gb|EDM30086.1| hypothetical protein RTM1035_00450 [Roseovarius sp. TM1035] Length=387 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 162/376 (44%), Positives = 224/376 (60%), Gaps = 7/376 (1%) Query 58 RDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLA 117 R ++ AL V+L GPRQ GKTTL+ + P D E D L +P L Sbjct 4 RQTHQLVQSALANQAAVVLLGPRQVGKTTLALDIASEQPSVYLDLERDADRQILTEPDLY 63 Query 118 LSGLSG-LITIDEAQRIPDLFPVLRVLVDR----PVMPARFLILGSASPDLVGLASESLA 172 L +G L+ +DE Q++P LF LR +D+ +FL+LGSAS L+ ++ESLA Sbjct 64 LDEQTGKLVILDEVQQMPGLFKSLRGQIDQRRRAGFRTGQFLLLGSASNVLLQQSAESLA 123 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GRV +E+ L + +VG+ + LWLRGG P SF A S++ S WR ++ T+LERD+ Sbjct 124 GRVRYIEMPPLQLTEVGTDQLNALWLRGGFPDSFLAASDQASMDWRLDFLRTYLERDIPA 183 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 LG RIPAAT+RR WTMLAH G L + A LA L V+ T RYLD L D ++VR+L PW Sbjct 184 LGPRIPAATLRRFWTMLAHVQGGLLNAAALAEGLGVSGQTIGRYLDLLVDLMLVRRLQPW 243 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQ-LAALLAPN 351 N+GKR +SPKIY+RD+G++H LL I L +P +G SWEGF +E LAA A Sbjct 244 HENVGKRLVKSPKIYVRDSGIVHALLSIGTTEGLLGHPVVGGSWEGFCIETLLAATPAGT 303 Query 352 PLYYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGE 410 +++RT AELDL + L G + EIKRT+ P +SR + D++ R ++Y GE Sbjct 304 EPFFYRTSAGAELDLVLRLPGGDIWAVEIKRTTAPKVSRGFHTGAEDVKANRKLLIYAGE 363 Query 411 HRFPLSDTVVAVPADQ 426 PL++ + A+P +Q Sbjct 364 RDVPLAEDIRAIPLEQ 379 >gi|110597662|ref|ZP_01385947.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110340782|gb|EAT59259.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length=389 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 159/366 (44%), Positives = 218/366 (60%), Gaps = 7/366 (1%) Query 58 RDAAARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLA 117 RD +L L P V L GPRQ GKTTL+ +G S D E+ D ++A P Sbjct 4 RDLHNKLVDTLQHFPAVALLGPRQVGKTTLALEIGHSRNSLYLDLESEQDRAKMAQPEFY 63 Query 118 LSGLS-GLITIDEAQRIPDLFPVLRVLVDRPVMPAR----FLILGSASPDLVGLASESLA 172 LS L+ IDE R P LFPVLR L+DR R +L+LGSAS DL+ + E+LA Sbjct 64 LSDHQDKLVIIDEVHRAPGLFPVLRGLIDRSRRAGRKNGQYLLLGSASLDLLKQSGETLA 123 Query 173 GRVELVELSGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQ 232 GR+ +EL+ TV + +D LW+RGG P S A S+ +S WR +I T+LERD+ Q Sbjct 124 GRIAYLELTPFTVLETPEFPSDELWVRGGFPDSLLADSSAESLRWRQNFIRTYLERDIPQ 183 Query 233 LGVRIPAATMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPW 292 G RI A T+RR W MLAH L + ++ AR+L V T Y+D L D L+VR+LTPW Sbjct 184 FGPRIAAETLRRFWIMLAHNQSGLLNSSQFARNLGVDVKTVNSYIDLLVDLLLVRRLTPW 243 Query 293 FANIGKRQRRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPN- 351 +NIGKR ++PK+Y+RD+GLLH LL I D+ AL +P +G SWEGFV+E + ++ + Sbjct 244 HSNIGKRLVKAPKVYVRDSGLLHALLTIPDKEALLSHPVVGQSWEGFVIENILGSVSDDV 303 Query 352 PLYYWRTQQDAELDLYVEL-SGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGE 410 ++RT E+DL + +G + EIKR+ TP + R SA DL +R +VYPG Sbjct 304 QACFYRTAGGGEVDLLLSWPNGNLWAVEIKRSVTPKLERGFHSACTDLNPSRKYVVYPGS 363 Query 411 HRFPLS 416 R+ ++ Sbjct 364 ERYRMA 369 Lambda K H 0.321 0.137 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 906527000372 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40