BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2011c Length=143 Score E Sequences producing significant alignments: (Bits) Value gi|15609148|ref|NP_216527.1| hypothetical protein Rv2011c [Mycob... 278 2e-73 gi|254380568|ref|ZP_04995934.1| hypothetical protein SSAG_00236 ... 152 1e-35 gi|297196678|ref|ZP_06914076.1| conserved hypothetical protein [... 141 4e-32 gi|127514076|ref|YP_001095273.1| MarR family transcriptional reg... 86.3 1e-15 gi|300309664|ref|YP_003773756.1| transcription regulator protein... 86.3 2e-15 gi|150397923|ref|YP_001328390.1| MarR family transcriptional reg... 85.1 3e-15 gi|329945393|ref|ZP_08293156.1| hypothetical protein HMPREF9056_... 82.8 1e-14 gi|222084439|ref|YP_002542968.1| transcriptional regulator prote... 81.3 4e-14 gi|262203924|ref|YP_003275132.1| MarR family transcriptional reg... 80.9 6e-14 gi|227823408|ref|YP_002827381.1| putative transcriptional regula... 79.7 1e-13 gi|193216294|ref|YP_001997493.1| MarR family transcriptional reg... 79.3 2e-13 gi|170725467|ref|YP_001759493.1| MarR family transcriptional reg... 79.3 2e-13 gi|311105617|ref|YP_003978470.1| MarR family transcriptional reg... 77.8 5e-13 gi|340360593|ref|ZP_08683061.1| MarR family transcriptional regu... 77.4 7e-13 gi|316934915|ref|YP_004109897.1| regulatory protein MarR [Rhodop... 77.0 9e-13 gi|192290511|ref|YP_001991116.1| MarR family transcriptional reg... 77.0 9e-13 gi|39934978|ref|NP_947254.1| MarR family transcriptional regulat... 76.6 1e-12 gi|37524940|ref|NP_928284.1| hypothetical protein plu0948 [Photo... 76.3 2e-12 gi|209518369|ref|ZP_03267193.1| transcriptional regulator, MarR ... 75.9 2e-12 gi|291286796|ref|YP_003503612.1| MarR family transcriptional reg... 75.9 2e-12 gi|326794695|ref|YP_004312515.1| regulatory protein MarR [Marino... 75.9 2e-12 gi|298245241|ref|ZP_06969047.1| transcriptional regulator, MarR ... 75.1 3e-12 gi|302535340|ref|ZP_07287682.1| MarR family transcriptional regu... 75.1 3e-12 gi|254560564|ref|YP_003067659.1| MarR family transcriptional reg... 74.3 6e-12 gi|302553012|ref|ZP_07305354.1| MarR family transcriptional regu... 74.3 6e-12 gi|320009943|gb|ADW04793.1| transcriptional regulator, MarR fami... 73.9 6e-12 gi|300741994|ref|ZP_07072015.1| transcriptional regulator, MarR ... 73.9 7e-12 gi|311111898|ref|YP_003983120.1| MarR family transcriptional reg... 73.9 7e-12 gi|240138004|ref|YP_002962476.1| transcriptional regulator, MarR... 73.9 7e-12 gi|107025797|ref|YP_623308.1| MarR family transcriptional regula... 73.6 8e-12 gi|29831096|ref|NP_825730.1| MarR family transcriptional regulat... 73.6 9e-12 gi|116693020|ref|YP_838553.1| MarR family transcriptional regula... 73.2 1e-11 gi|271963686|ref|YP_003337882.1| MarR family transcriptional reg... 73.2 1e-11 gi|115359106|ref|YP_776244.1| MarR family transcriptional regula... 72.8 1e-11 gi|172063888|ref|YP_001811539.1| MarR family transcriptional reg... 72.8 2e-11 gi|206563999|ref|YP_002234762.1| MarR family regulatory protein ... 72.8 2e-11 gi|170737718|ref|YP_001778978.1| MarR family transcriptional reg... 72.4 2e-11 gi|254250132|ref|ZP_04943452.1| regulatory protein, MarR [Burkho... 72.4 2e-11 gi|284989168|ref|YP_003407722.1| MarR family transcriptional reg... 72.0 3e-11 gi|326777803|ref|ZP_08237068.1| regulatory protein MarR [Strepto... 72.0 3e-11 gi|300781268|ref|ZP_07091122.1| MarR-family transcriptional regu... 72.0 3e-11 gi|170701805|ref|ZP_02892738.1| transcriptional regulator, MarR ... 72.0 3e-11 gi|78061615|ref|YP_371523.1| MarR family transcriptional regulat... 72.0 3e-11 gi|336115928|ref|YP_004570694.1| putative MarR family transcript... 71.6 3e-11 gi|84387025|ref|ZP_00990048.1| putative transcription regulator ... 71.6 3e-11 gi|296115834|ref|ZP_06834459.1| putative transcriptional regulat... 71.6 4e-11 gi|239989498|ref|ZP_04710162.1| MarR family transcriptional regu... 71.6 4e-11 gi|218460794|ref|ZP_03500885.1| MarR family transcriptional regu... 71.2 5e-11 gi|163850875|ref|YP_001638918.1| regulatory protein MarR [Methyl... 71.2 5e-11 gi|218529696|ref|YP_002420512.1| MarR family transcriptional reg... 70.9 6e-11 >gi|15609148|ref|NP_216527.1| hypothetical protein Rv2011c [Mycobacterium tuberculosis H37Rv] gi|15841493|ref|NP_336530.1| hypothetical protein MT2066 [Mycobacterium tuberculosis CDC1551] gi|31793191|ref|NP_855684.1| hypothetical protein Mb2034c [Mycobacterium bovis AF2122/97] 82 more sequence titles Length=143 Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%) Query 1 MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVT 60 MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVT Sbjct 1 MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVT 60 Query 61 RQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVD 120 RQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVD Sbjct 61 RQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVD 120 Query 121 PAALQATRDSLRRMIVALKAERP 143 PAALQATRDSLRRMIVALKAERP Sbjct 121 PAALQATRDSLRRMIVALKAERP 143 >gi|254380568|ref|ZP_04995934.1| hypothetical protein SSAG_00236 [Streptomyces sp. Mg1] gi|194339479|gb|EDX20445.1| hypothetical protein SSAG_00236 [Streptomyces sp. Mg1] Length=176 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 81/134 (61%), Positives = 99/134 (74%), Gaps = 0/134 (0%) Query 1 MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVT 60 M++E+A LVADVFE AG LRR+GE +A EG TQARWQL+SVVS+ +L V +AARRLGV Sbjct 1 MAEELALLVADVFEAAGALRRAGEALAGAEGQTQARWQLMSVVSEESLPVARAARRLGVA 60 Query 61 RQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVD 120 RQGVQR+AN+LV GLAE R NPDHRTS LL LT +GRR L+AIT RA + + + + Sbjct 61 RQGVQRIANELVRDGLAEFRDNPDHRTSSLLALTPSGRRALEAITARAEAAHRAMGEGIA 120 Query 121 PAALQATRDSLRRM 134 A L R LRR+ Sbjct 121 QADLATLRALLRRL 134 >gi|297196678|ref|ZP_06914076.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153338|gb|EFH32307.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=155 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/119 (66%), Positives = 87/119 (74%), Gaps = 0/119 (0%) Query 1 MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVT 60 +SDE+A LVADVFE AG LRR GE A EG TQARWQ+LSVVS+ ALTVPQAARRLGV+ Sbjct 8 VSDEMALLVADVFEAAGALRRLGEHTAQAEGLTQARWQVLSVVSETALTVPQAARRLGVS 67 Query 61 RQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 RQ VQRVANDLV G A NPDHR SPLL LT G+ VL +T RA V+ L A+ Sbjct 68 RQNVQRVANDLVTFGHAAYTANPDHRGSPLLALTPQGQEVLARVTTRASAVHRTLFAAL 126 >gi|127514076|ref|YP_001095273.1| MarR family transcriptional regulator [Shewanella loihica PV-4] gi|126639371|gb|ABO25014.1| transcriptional regulator, MarR family [Shewanella loihica PV-4] Length=145 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/132 (35%), Positives = 75/132 (57%), Gaps = 2/132 (1%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVV--SDRALTVPQAARRLGVTRQ 62 +V +VF+L+G L G+ + + ARW++L + + +TV A +G +RQ Sbjct 10 FTEIVLEVFKLSGQLTTEGDKLTQDVQMSSARWKVLGALGRAGNPMTVSDVAHSMGQSRQ 69 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 GVQR+AN++V G L NP H+ + LL+LT+ G VLQ + ++ + A +D Sbjct 70 GVQRLANEMVELGFIALADNPQHKKAKLLLLTDKGVDVLQQLEQKQLPWAEACAQGIDAE 129 Query 123 ALQATRDSLRRM 134 ALQ T D+LR++ Sbjct 130 ALQVTLDTLRKL 141 >gi|300309664|ref|YP_003773756.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gi|300072449|gb|ADJ61848.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length=152 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/128 (41%), Positives = 72/128 (57%), Gaps = 2/128 (1%) Query 4 EIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTR 61 +++ LV +F L G L G A EG + ARWQ+L ++ +R LTVPQ A +G+TR Sbjct 9 QLSDLVLAIFRLNGALIDWGNEFVAPEGLSSARWQMLGAIAIAERPLTVPQIAANMGMTR 68 Query 62 QGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDP 121 QG Q+ N LV GL + + NP H+ SPL LT+ G+ V AI ER I + A + Sbjct 69 QGAQKQVNQLVEDGLMQSQVNPIHQRSPLYELTQRGQAVHAAIYERWIAHATQTAAKIKG 128 Query 122 AALQATRD 129 L+A D Sbjct 129 TDLKALTD 136 >gi|150397923|ref|YP_001328390.1| MarR family transcriptional regulator [Sinorhizobium medicae WSM419] gi|150029438|gb|ABR61555.1| transcriptional regulator, MarR family [Sinorhizobium medicae WSM419] Length=155 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/141 (42%), Positives = 75/141 (54%), Gaps = 3/141 (2%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQ 62 D A V LAG L G+ +A G T ARWQ+L+ ++V +AAR LG+ RQ Sbjct 11 DAFAAFAISVLRLAGHLTSEGDRLAQPSGQTSARWQVLAAARHGNMSVAEAARALGLARQ 70 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 GVQR+A+ L L + R NP HR + L+VLT G +VL IT R + N L + Sbjct 71 GVQRIADVLKTEDLIDYRENPLHRRAKLIVLTPGGEKVLAEITARQAIWANALGSEIGEE 130 Query 123 AL-QATRDSLRRMIVALKAER 142 L QAT L I+AL ER Sbjct 131 RLRQAT--VLATEIIALFRER 149 >gi|329945393|ref|ZP_08293156.1| hypothetical protein HMPREF9056_01042 [Actinomyces sp. oral taxon 170 str. F0386] gi|328529015|gb|EGF55946.1| hypothetical protein HMPREF9056_01042 [Actinomyces sp. oral taxon 170 str. F0386] Length=157 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/104 (47%), Positives = 61/104 (59%), Gaps = 0/104 (0%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTR 61 D + LV VF L G L + V A T ARWQ+L V + +L V + ARR+G+ R Sbjct 8 GDALTALVLPVFALNGELLEAAAVFTAPHELTPARWQVLGAVLEESLPVAEIARRVGLAR 67 Query 62 QGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAIT 105 Q VQRVAND+V+ G A NP R LLVLT+ GRR + A+T Sbjct 68 QSVQRVANDVVIQGWARWEPNPGRRGQNLLVLTDRGRRAIAALT 111 >gi|222084439|ref|YP_002542968.1| transcriptional regulator protein [Agrobacterium radiobacter K84] gi|221721887|gb|ACM25043.1| transcriptional regulator protein [Agrobacterium radiobacter K84] Length=143 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/104 (44%), Positives = 61/104 (59%), Gaps = 2/104 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSD--RALTVPQAARRLGV 59 +DE+ RL+ +VF L G L G+ + G T ARWQ+L ++ TV Q A+ GV Sbjct 5 ADELGRLILEVFRLNGRLLARGDEIVGPIGLTSARWQVLGAIARPRNGRTVAQIAKEAGV 64 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQA 103 RQGVQR+ N+LV GL E R NP H+ + L+VLT G +A Sbjct 65 ARQGVQRIVNELVRDGLVEFRDNPHHKKAQLVVLTGKGSDTYEA 108 >gi|262203924|ref|YP_003275132.1| MarR family transcriptional regulator [Gordonia bronchialis DSM 43247] gi|262087271|gb|ACY23239.1| regulatory protein MarR [Gordonia bronchialis DSM 43247] Length=147 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/142 (40%), Positives = 73/142 (52%), Gaps = 4/142 (2%) Query 4 EIARLVAD----VFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGV 59 E RL++D VF L G E +A G T RWQ+L V D LTV AR +G+ Sbjct 3 EHQRLLSDSALTVFRLNGQFLALAESLAQPVGLTATRWQVLGAVIDTPLTVSDIARSMGI 62 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 TRQ VQR A+ LV GL R NP HR + L+ +T++GR AI +V +RLA + Sbjct 63 TRQSVQRTADLLVADGLLTYRDNPAHRRAKLVAITDDGRAANDAIGPAHRIVADRLASIL 122 Query 120 DPAALQATRDSLRRMIVALKAE 141 Q D+L + AL A Sbjct 123 GDQRWQQALDALHDLSAALDAH 144 >gi|227823408|ref|YP_002827381.1| putative transcriptional regulator, MarR family [Sinorhizobium fredii NGR234] gi|227342410|gb|ACP26628.1| putative transcriptional regulator, MarR family [Sinorhizobium fredii NGR234] Length=153 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/142 (41%), Positives = 72/142 (51%), Gaps = 3/142 (2%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTR 61 D A V LAG L G+ +A G T ARWQ+L+ ++V AAR LG+ R Sbjct 10 GDAFAEFAILVIRLAGHLTLEGDRLAQPSGQTSARWQVLAAARHATMSVADAARALGLAR 69 Query 62 QGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDP 121 QGVQR+A+ L GL R NP H+ + L+ LT G L IT R V N+L + Sbjct 70 QGVQRIADLLEADGLLAYRQNPAHQRAKLMTLTPKGEAALTEITARQAVWANQLGAEMGE 129 Query 122 AAL-QATRDSLRRMIVALKAER 142 L QAT +L IV L ER Sbjct 130 ERLRQAT--ALITEIVTLVGER 149 >gi|193216294|ref|YP_001997493.1| MarR family transcriptional regulator [Chloroherpeton thalassium ATCC 35110] gi|193089771|gb|ACF15046.1| transcriptional regulator, MarR family [Chloroherpeton thalassium ATCC 35110] Length=147 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/125 (31%), Positives = 72/125 (58%), Gaps = 2/125 (1%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQ 62 ++V ++F+L+GL+ G+ + G T ARW++L +S +TV + A+ +G TRQ Sbjct 10 FTQIVLEIFKLSGLIAADGDRLTKDLGLTSARWKVLGALSMAGEPMTVAKIAKTMGQTRQ 69 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 GVQR+A+++ G+ R+NP+H+ + +VLT+ G V + + + A+ ++ Sbjct 70 GVQRIADEMADAGIVTYRNNPNHKRAKFMVLTDKGNEVYKKLIKIQYPWAEEKAEGIELK 129 Query 123 ALQAT 127 +Q T Sbjct 130 EMQMT 134 >gi|170725467|ref|YP_001759493.1| MarR family transcriptional regulator [Shewanella woodyi ATCC 51908] gi|169810814|gb|ACA85398.1| transcriptional regulator, MarR family [Shewanella woodyi ATCC 51908] Length=143 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/131 (34%), Positives = 68/131 (52%), Gaps = 0/131 (0%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQGV 64 +LV +F L GLL G+ ++ G T ARW++L V TV Q AR +G TRQ V Sbjct 7 FTQLVLSIFRLNGLLVTEGDNLSQPVGLTSARWKILGAVEKSPQTVSQIARTMGQTRQSV 66 Query 65 QRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAAL 124 QR+AN+LV + NP+H+T+ L+V T G + ++E I + + + L Sbjct 67 QRIANELVKLEIVTFESNPEHKTAKLIVRTAKGAALFALLSESLIPWGHDAVEGISEEEL 126 Query 125 QATRDSLRRMI 135 T + ++I Sbjct 127 LITLKVITKLI 137 >gi|311105617|ref|YP_003978470.1| MarR family transcriptional regulator [Achromobacter xylosoxidans A8] gi|310760306|gb|ADP15755.1| bacterial regulatory helix-turn-helix protein, MarR family protein 7 [Achromobacter xylosoxidans A8] Length=155 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/137 (37%), Positives = 71/137 (52%), Gaps = 2/137 (1%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVT 60 + + ++ +F+L G L G+ A E T ARWQ+L ++ + L+ PQ A +GVT Sbjct 7 ERLTGVILTLFQLNGALLDWGDAFVAPEALTSARWQMLGALALAGQPLSAPQLAAAMGVT 66 Query 61 RQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVD 120 RQG Q+ N L L E+R NP H+ SPL LT+ GRRV AI R +LA Sbjct 67 RQGAQKQLNLLSEARLVEVRANPQHKRSPLYRLTDEGRRVYGAIDARWKERARQLAGGFS 126 Query 121 PAALQATRDSLRRMIVA 137 A L+ L ++ A Sbjct 127 AAELETAGRVLTGLLAA 143 >gi|340360593|ref|ZP_08683061.1| MarR family transcriptional regulator [Actinomyces sp. oral taxon 448 str. F0400] gi|339883223|gb|EGQ73084.1| MarR family transcriptional regulator [Actinomyces sp. oral taxon 448 str. F0400] Length=155 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/105 (42%), Positives = 60/105 (58%), Gaps = 0/105 (0%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTR 61 D + LV +F L G + + + A T ARWQ+L V D +L V + ARR+G+TR Sbjct 8 GDALTALVLPIFTLNGEILEAAATITALHELTPARWQVLGAVLDESLPVAEIARRVGLTR 67 Query 62 QGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITE 106 Q VQRVAND+V A + NP R LLVLT GR+ + A+ + Sbjct 68 QSVQRVANDVVAQDWAHWQPNPGRRGQNLLVLTPKGRQAVAALAK 112 >gi|316934915|ref|YP_004109897.1| regulatory protein MarR [Rhodopseudomonas palustris DX-1] gi|315602629|gb|ADU45164.1| regulatory protein MarR [Rhodopseudomonas palustris DX-1] Length=157 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 48/126 (39%), Positives = 70/126 (56%), Gaps = 2/126 (1%) Query 8 LVADVFELAGLLRRSGEVVAAREGHTQARWQLL-SVVSDRA-LTVPQAARRLGVTRQGVQ 65 LV ++F L G L R G+ + G T ARWQ+L SV R +V + A +G+ RQ VQ Sbjct 16 LVLEIFRLNGALIRFGDALVKPLGLTSARWQVLGSVAHGRGTFSVARLADNMGLARQSVQ 75 Query 66 RVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQ 125 R+ ++L GL NP H+ + L+VLT G RV + +E + V + + DP L+ Sbjct 76 RIVDELADAGLVGFAPNPAHKRAKLVVLTPRGERVFRQASELWLPVADAMVAGADPRQLR 135 Query 126 ATRDSL 131 TRD+L Sbjct 136 KTRDAL 141 >gi|192290511|ref|YP_001991116.1| MarR family transcriptional regulator [Rhodopseudomonas palustris TIE-1] gi|192284260|gb|ACF00641.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris TIE-1] Length=157 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/126 (39%), Positives = 69/126 (55%), Gaps = 2/126 (1%) Query 8 LVADVFELAGLLRRSGEVVAAREGHTQARWQLL-SVVSDRA-LTVPQAARRLGVTRQGVQ 65 LV +VF L G L R G+ + G T ARWQ+L SV R +V + A +G+ RQ VQ Sbjct 16 LVLEVFRLNGALIRFGDALVKPLGLTSARWQVLGSVAHGRGTFSVARLADNMGLARQSVQ 75 Query 66 RVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQ 125 R+ ++L GL NP H+ + L+VLT G RV + +E V + + DP L+ Sbjct 76 RIVDELAEAGLVGFAPNPAHKRAKLVVLTPRGERVFKQASEVWAPVADAMIAGADPRQLR 135 Query 126 ATRDSL 131 TRD+L Sbjct 136 KTRDAL 141 >gi|39934978|ref|NP_947254.1| MarR family transcriptional regulator [Rhodopseudomonas palustris CGA009] gi|39648829|emb|CAE27350.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris CGA009] Length=157 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/126 (39%), Positives = 69/126 (55%), Gaps = 2/126 (1%) Query 8 LVADVFELAGLLRRSGEVVAAREGHTQARWQLL-SVVSDRA-LTVPQAARRLGVTRQGVQ 65 LV +VF L G L R G+ + G T ARWQ+L SV R +V + A +G+ RQ VQ Sbjct 16 LVLEVFRLNGALIRFGDALVKPLGLTSARWQVLGSVAHGRGTFSVARLADNMGLARQSVQ 75 Query 66 RVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQ 125 R+ ++L GL NP H+ + L+VLT G RV + +E V + + DP L+ Sbjct 76 RIVDELAEAGLVGFAPNPAHKRAKLVVLTPRGERVFKQASEVWAPVADAMIAGADPRQLR 135 Query 126 ATRDSL 131 TRD+L Sbjct 136 KTRDAL 141 >gi|37524940|ref|NP_928284.1| hypothetical protein plu0948 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784366|emb|CAE13243.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length=157 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/122 (39%), Positives = 62/122 (51%), Gaps = 2/122 (1%) Query 12 VFELAGLLRRSGEVVAAREGHTQARWQLLSVVSD--RALTVPQAARRLGVTRQGVQRVAN 69 VF L LL G+ + A G T ARWQ+L ++ LT PQ A +G+TRQGVQ+ N Sbjct 19 VFRLNALLLSKGDQLVAPLGITSARWQVLGAIAHAPHPLTTPQIAAAMGITRQGVQKQLN 78 Query 70 DLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQATRD 129 + G+ + NP H SPL LTE GRR A L + DP L+ T + Sbjct 79 LGLSSGMVKTITNPRHERSPLYQLTELGRRTFDAAISLEAEWVGSLVQSTDPNELKVTLN 138 Query 130 SL 131 +L Sbjct 139 TL 140 >gi|209518369|ref|ZP_03267193.1| transcriptional regulator, MarR family [Burkholderia sp. H160] gi|209501188|gb|EEA01220.1| transcriptional regulator, MarR family [Burkholderia sp. H160] Length=158 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/129 (38%), Positives = 67/129 (52%), Gaps = 2/129 (1%) Query 8 LVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQGVQ 65 ++ D+F L L +G+ + A G T ARWQ+L ++ +R V AR LG RQ VQ Sbjct 16 IILDLFRLNSGLLTAGDRLVASLGLTSARWQILGAINAAERPQPVAWLARDLGANRQNVQ 75 Query 66 RVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQ 125 R+ NDL GL NP HR + L+VLT+ GR L A NRL+D + +Q Sbjct 76 RIVNDLAEDGLVRFEANPHHRRAQLVVLTDKGRHALDAAMSLQAPWVNRLSDGLAVDEIQ 135 Query 126 ATRDSLRRM 134 A L ++ Sbjct 136 AAHHVLMKL 144 >gi|291286796|ref|YP_003503612.1| MarR family transcriptional regulator [Denitrovibrio acetiphilus DSM 12809] gi|290883956|gb|ADD67656.1| transcriptional regulator, MarR family [Denitrovibrio acetiphilus DSM 12809] Length=147 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/135 (35%), Positives = 73/135 (55%), Gaps = 2/135 (1%) Query 8 LVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVV--SDRALTVPQAARRLGVTRQGVQ 65 +V +VF+L GLL G+ + G T ARW++L + + LTV + A ++G TRQGVQ Sbjct 13 IVLEVFKLNGLLIAEGDKLVKEFGLTSARWKVLGALALTGEPLTVSRIAVKMGQTRQGVQ 72 Query 66 RVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQ 125 R+A+ + GL +NP H+ + L+ LTE G + ++ I +N LAD +D + Sbjct 73 RIADVMETEGLITYVNNPYHKKARLVKLTEKGTDLYSKADDKQIDWSNTLADNIDIVDAE 132 Query 126 ATRDSLRRMIVALKA 140 LR + L+ Sbjct 133 TALKVLRAVYCGLQG 147 >gi|326794695|ref|YP_004312515.1| regulatory protein MarR [Marinomonas mediterranea MMB-1] gi|326545459|gb|ADZ90679.1| regulatory protein MarR [Marinomonas mediterranea MMB-1] Length=147 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/136 (32%), Positives = 71/136 (53%), Gaps = 2/136 (1%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQ 62 +V +VF+L GLL G+ + G T ARW++L +S TVPQ A+ +G+TRQ Sbjct 10 FTEIVLEVFKLGGLLVSEGDQMGQEFGITSARWKVLGALSLAGEPQTVPQIAKSMGLTRQ 69 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 VQR+ + + L NPDH+ + L+ L++ G V + E+ + + + + Sbjct 70 AVQRLVDAMYDDELLLFNENPDHKRAKLISLSKLGGAVFSTLEEKQLGWATKCSTDITKV 129 Query 123 ALQATRDSLRRMIVAL 138 L AT L+R+ A+ Sbjct 130 ELTATLSVLKRISTAI 145 >gi|298245241|ref|ZP_06969047.1| transcriptional regulator, MarR family [Ktedonobacter racemifer DSM 44963] gi|297552722|gb|EFH86587.1| transcriptional regulator, MarR family [Ktedonobacter racemifer DSM 44963] Length=171 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/140 (35%), Positives = 72/140 (52%), Gaps = 0/140 (0%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTR 61 +D + R +F + GLL R+G+ + G + ARWQ+L V + TV Q AR +G R Sbjct 17 NDPLGRFALSIFWINGLLLRNGDRLTRSIGQSSARWQVLGRVGYQPQTVAQIARDMGHAR 76 Query 62 QGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDP 121 Q VQRVA+ L GL R N +R SPLL LT +G +L+ I + ++P Sbjct 77 QSVQRVADVLAKEGLVVYRENLANRRSPLLELTPHGADILRTIYSLNEEWTRHMMTKLNP 136 Query 122 AALQATRDSLRRMIVALKAE 141 L D+L + ++A+ Sbjct 137 EQLDVVADALEEIAHIMEAD 156 >gi|302535340|ref|ZP_07287682.1| MarR family transcriptional regulator [Streptomyces sp. C] gi|302444235|gb|EFL16051.1| MarR family transcriptional regulator [Streptomyces sp. C] Length=155 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/138 (40%), Positives = 69/138 (50%), Gaps = 0/138 (0%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQ 62 D ++R +VF L G E +A G T A WQ+L V L V AR +G+TRQ Sbjct 12 DLLSRTALNVFHLNGQFLSVSEELARPAGLTAAWWQVLGAVLTEPLPVAGIARTMGITRQ 71 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 VQRVA+ L GLAE NP HR + LL TE GR + I + +RL +A+ A Sbjct 72 SVQRVADLLAARGLAEYVPNPAHRRAKLLRPTEAGRAAIARIDPGHAELADRLTEALGEA 131 Query 123 ALQATRDSLRRMIVALKA 140 T L R+ AL A Sbjct 132 GFAETVAVLDRLSAALSA 149 >gi|254560564|ref|YP_003067659.1| MarR family transcriptional regulator [Methylobacterium extorquens DM4] gi|254267842|emb|CAX23704.1| transcriptional regulator, MarR family [Methylobacterium extorquens DM4] Length=163 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/143 (40%), Positives = 76/143 (54%), Gaps = 3/143 (2%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQA--ARRLGV 59 +D LV ++F +G L +G+ + G T ARWQ+L V+ A +P A AR +G+ Sbjct 9 ADAATALVLEIFRSSGALLAAGDRLVGDLGLTSARWQVLGAVALAAQPLPVARIARDMGM 68 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 TRQGVQR N+L GL NP H + L++LT GR A T R LA + Sbjct 69 TRQGVQRTVNELAKAGLVSFADNPHHLRARLVLLTPAGRDAYAAATARQAPWAAALARGL 128 Query 120 DPAALQATRDSLRRMIVALKAER 142 DPAAL+A R +L R I ER Sbjct 129 DPAALEAAR-ALVRTIGERAGER 150 >gi|302553012|ref|ZP_07305354.1| MarR family transcriptional regulator [Streptomyces viridochromogenes DSM 40736] gi|302470630|gb|EFL33723.1| MarR family transcriptional regulator [Streptomyces viridochromogenes DSM 40736] Length=158 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/122 (41%), Positives = 61/122 (50%), Gaps = 0/122 (0%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQ 62 D +R VF L G E +A G T A WQ+L V L V AR +G+TRQ Sbjct 7 DLFSRSALGVFRLNGQFLTVAEELARPAGLTAAWWQVLGAVLGEPLPVSGIARAMGITRQ 66 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 VQR+A+ LV GLAE R NP HR + LL TE GR + I +RLA+ A Sbjct 67 SVQRIADLLVRRGLAEYRPNPAHRRAKLLAPTEQGRAAIARIGPGHAAFADRLAEEFGEA 126 Query 123 AL 124 L Sbjct 127 EL 128 >gi|320009943|gb|ADW04793.1| transcriptional regulator, MarR family [Streptomyces flavogriseus ATCC 33331] Length=164 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/136 (39%), Positives = 65/136 (48%), Gaps = 0/136 (0%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQ 62 D +R VF L G E +A+ G T ARWQ+L V L V AR +G+TRQ Sbjct 13 DRFSRTAIGVFRLNGRFLSVAEELASPAGLTAARWQVLGAVLSEPLPVAGIARAMGITRQ 72 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 VQR+A+ LV GLAE NP HR + LL T GR + I RLA A+ Sbjct 73 SVQRIADLLVDGGLAEYVANPAHRRAKLLRPTPEGRAAVDRIGPAHAEFAERLAGALGEE 132 Query 123 ALQATRDSLRRMIVAL 138 T L R+ A+ Sbjct 133 EFARTVQVLERLSAAM 148 >gi|300741994|ref|ZP_07072015.1| transcriptional regulator, MarR family [Rothia dentocariosa M567] gi|300381179|gb|EFJ77741.1| transcriptional regulator, MarR family [Rothia dentocariosa M567] Length=143 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/105 (42%), Positives = 58/105 (56%), Gaps = 2/105 (1%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQ 62 ++ LV +F + G L G+ AA G T ARWQ+L +S T PQ A R+G+TRQ Sbjct 6 LSELVVQIFRVNGTLTAWGDRFAAESGLTTARWQVLGAISMAKEPSTSPQIAERMGITRQ 65 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 GVQ+ N L GL NP H+ SP LTE+G + L I +R Sbjct 66 GVQKQLNLLRDEGLVMSVENPAHKRSPRYSLTEHGEQKLAEIRKR 110 >gi|311111898|ref|YP_003983120.1| MarR family transcriptional regulator [Rothia dentocariosa ATCC 17931] gi|310943392|gb|ADP39686.1| MarR family transcriptional regulator [Rothia dentocariosa ATCC 17931] Length=143 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/105 (42%), Positives = 58/105 (56%), Gaps = 2/105 (1%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQ 62 ++ LV +F + G L G+ AA G T ARWQ+L +S T PQ A R+G+TRQ Sbjct 6 LSELVVQIFRVNGTLTAWGDRFAAESGLTTARWQVLGAISMSKEPSTSPQIAERMGITRQ 65 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 GVQ+ N L GL NP H+ SP LTE+G + L I +R Sbjct 66 GVQKQLNLLRDEGLVMSVENPAHKRSPRYSLTEHGEQKLAEIRKR 110 >gi|240138004|ref|YP_002962476.1| transcriptional regulator, MarR family [methylobacterium extorquens AM1] gi|240007973|gb|ACS39199.1| transcriptional regulator, MarR family [Methylobacterium extorquens AM1] Length=163 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/143 (40%), Positives = 75/143 (53%), Gaps = 3/143 (2%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQA--ARRLGV 59 +D LV ++F +G L +G+ + G T ARWQ+L V+ A +P A AR +G+ Sbjct 9 ADAATALVLEIFRSSGALLAAGDRLVGDLGLTSARWQVLGAVALAAQPLPVARIARDMGM 68 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 TRQGVQR N+L GL NP H + L++LT GR A R LA + Sbjct 69 TRQGVQRTVNELAKAGLVTFADNPHHLRARLVLLTPAGRDAYAAAAVRQAPWAAALARDL 128 Query 120 DPAALQATRDSLRRMIVALKAER 142 DPAAL+A R +L R I ER Sbjct 129 DPAALEAAR-TLVRTIGERAGER 150 >gi|107025797|ref|YP_623308.1| MarR family transcriptional regulator [Burkholderia cenocepacia AU 1054] gi|105895171|gb|ABF78335.1| transcriptional regulator, MarR family [Burkholderia cenocepacia AU 1054] Length=189 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 43/108 (40%), Positives = 55/108 (51%), Gaps = 2/108 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGV 59 SD++ + VF L GLL G A G T ARWQ+L +S A +PQ A +G+ Sbjct 45 SDKLTAIALSVFRLNGLLIEWGNTFAGPHGLTSARWQVLGAISMAPDAPNIPQIANAMGI 104 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 TRQ V + N L GL NP H+ SPL LT G QA+ E+ Sbjct 105 TRQAVLKQINVLTDEGLVLSLPNPAHKRSPLYALTPRGEAAYQAVVEQ 152 >gi|29831096|ref|NP_825730.1| MarR family transcriptional regulator [Streptomyces avermitilis MA-4680] gi|29608210|dbj|BAC72265.1| putative MarR-family transcriptional regulator [Streptomyces avermitilis MA-4680] Length=151 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/122 (42%), Positives = 61/122 (50%), Gaps = 0/122 (0%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQ 62 D +R VF L G E +A G T A WQ+L V L V AR +G+TRQ Sbjct 7 DLFSRGALAVFRLNGQFLGVAEELARPAGLTAAWWQVLGAVLGEPLPVSGIARAMGITRQ 66 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 VQR+A+ LV GLAE R NP HR + LL TE GR + I RLA A+ A Sbjct 67 SVQRIADLLVERGLAEYRPNPAHRRAKLLAPTEEGRAAVARIGPGHAAFAGRLAQALGDA 126 Query 123 AL 124 L Sbjct 127 EL 128 >gi|116693020|ref|YP_838553.1| MarR family transcriptional regulator [Burkholderia cenocepacia HI2424] gi|116651020|gb|ABK11660.1| transcriptional regulator, MarR family [Burkholderia cenocepacia HI2424] Length=189 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/108 (40%), Positives = 55/108 (51%), Gaps = 2/108 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGV 59 SD++ + VF L GLL G A G T ARWQ+L +S A +PQ A +G+ Sbjct 45 SDKLTAVALSVFRLNGLLIEWGNTFAGPHGLTSARWQVLGAISMAPDAPNIPQIANAMGI 104 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 TRQ V + N L GL NP H+ SPL LT G QA+ E+ Sbjct 105 TRQAVLKQINVLTDEGLVLSLPNPAHKRSPLYALTPRGEAAYQAVVEQ 152 >gi|271963686|ref|YP_003337882.1| MarR family transcriptional regulator [Streptosporangium roseum DSM 43021] gi|270506861|gb|ACZ85139.1| MarR family transcriptional regulator [Streptosporangium roseum DSM 43021] Length=154 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/129 (40%), Positives = 68/129 (53%), Gaps = 0/129 (0%) Query 12 VFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQGVQRVANDL 71 VF L G E +A G T A WQ+L V D L V AR +G+TRQ VQR+A+ L Sbjct 21 VFRLNGQFLEVAESLARPVGLTAAWWQVLGAVLDEPLPVAGIARAMGITRQSVQRIADLL 80 Query 72 VVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQATRDSL 131 V GLAE NP H + LL TE+GR ++ I + RLA+ + Q R++L Sbjct 81 VEKGLAEYLPNPAHSRAKLLRPTEDGRAAVRRIAPGQRALAGRLAEHLGLDEFQRAREAL 140 Query 132 RRMIVALKA 140 + AL+A Sbjct 141 ETLSRALEA 149 >gi|115359106|ref|YP_776244.1| MarR family transcriptional regulator [Burkholderia ambifaria AMMD] gi|115284394|gb|ABI89910.1| transcriptional regulator, MarR family [Burkholderia ambifaria AMMD] Length=148 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/99 (43%), Positives = 51/99 (52%), Gaps = 2/99 (2%) Query 11 DVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQGVQRVA 68 VF L GLL G AA G T ARWQ+L +S A +PQ A +G+TRQ V + Sbjct 13 SVFRLNGLLIEWGNTFAAPHGLTSARWQVLGAISMAPDAPNIPQIADAMGITRQAVLKQV 72 Query 69 NDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 N L GL + NP H+ SPL LT G QA+ E Sbjct 73 NVLTEEGLVQPLPNPTHKRSPLYALTPRGAAAYQAVVEH 111 >gi|172063888|ref|YP_001811539.1| MarR family transcriptional regulator [Burkholderia ambifaria MC40-6] gi|171996405|gb|ACB67323.1| transcriptional regulator, MarR family [Burkholderia ambifaria MC40-6] Length=148 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/99 (43%), Positives = 51/99 (52%), Gaps = 2/99 (2%) Query 11 DVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQGVQRVA 68 VF L GLL G AA G T ARWQ+L +S A +PQ A +G+TRQ V + Sbjct 13 SVFRLNGLLIEWGNAFAAPHGLTSARWQVLGAISMAPDAPNIPQIADAMGITRQAVLKQV 72 Query 69 NDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 N L GL + NP H+ SPL LT G QA+ E Sbjct 73 NVLTEEGLVQPLPNPTHKRSPLYALTPRGAAAYQAVVEH 111 >gi|206563999|ref|YP_002234762.1| MarR family regulatory protein [Burkholderia cenocepacia J2315] gi|198040039|emb|CAR56020.1| MarR family regulatory protein [Burkholderia cenocepacia J2315] Length=148 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/108 (40%), Positives = 55/108 (51%), Gaps = 2/108 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGV 59 SD++ + VF L GLL G A G T ARWQ+L +S A +PQ A +G+ Sbjct 4 SDKLTAVALSVFRLNGLLIEWGNTFAGPHGLTSARWQVLGAISMAPDAPNIPQIADTMGI 63 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 TRQ V + N L GL NP H+ SPL LT G QA+ E+ Sbjct 64 TRQAVLKQINVLTDEGLVLSLPNPAHKRSPLYALTPRGEAAYQAVVEQ 111 >gi|170737718|ref|YP_001778978.1| MarR family transcriptional regulator [Burkholderia cenocepacia MC0-3] gi|169819906|gb|ACA94488.1| transcriptional regulator, MarR family [Burkholderia cenocepacia MC0-3] Length=189 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/108 (40%), Positives = 55/108 (51%), Gaps = 2/108 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGV 59 SD++ + VF L GLL G A G T ARWQ+L +S A +PQ A +G+ Sbjct 45 SDKLTAVALSVFRLNGLLIEWGNTFAGPHGLTSARWQVLGAISMAPDAPNIPQIADTMGI 104 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 TRQ V + N L GL NP H+ SPL LT G QA+ E+ Sbjct 105 TRQAVLKQINVLTDEGLVLSLPNPAHKRSPLYALTPRGEAAYQAVVEQ 152 >gi|254250132|ref|ZP_04943452.1| regulatory protein, MarR [Burkholderia cenocepacia PC184] gi|124876633|gb|EAY66623.1| regulatory protein, MarR [Burkholderia cenocepacia PC184] Length=189 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/108 (40%), Positives = 55/108 (51%), Gaps = 2/108 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGV 59 SD++ + VF L GLL G A G T ARWQ+L +S A +PQ A +G+ Sbjct 45 SDKLTAVALSVFRLNGLLIEWGNTFAGPHGLTSARWQVLGAISMAPDAPNIPQIADAMGI 104 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 TRQ V + N L GL NP H+ SPL LT G QA+ E+ Sbjct 105 TRQAVLKQINVLTDEGLVLSLPNPAHKRSPLYALTPRGEAAYQAVVEQ 152 >gi|284989168|ref|YP_003407722.1| MarR family transcriptional regulator [Geodermatophilus obscurus DSM 43160] gi|284062413|gb|ADB73351.1| transcriptional regulator, MarR family [Geodermatophilus obscurus DSM 43160] Length=182 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/140 (39%), Positives = 69/140 (50%), Gaps = 9/140 (6%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARR--LGV 59 D + LV VFEL G + E + G T A WQ+L D AL V + ARR LG+ Sbjct 18 GDALTDLVLPVFELNGEFLAAAETMTGPVGLTPAWWQVLGATLDEALPVAEIARRVGLGL 77 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 RQ VQRVA+ LV G A NP HR + LL T GR L+ +T +R AD V Sbjct 78 ARQSVQRVADLLVEHGWAVYSDNPAHRRAKLLAPTPQGRSALRRLTS----AQHRWADTV 133 Query 120 DPAALQATRDSLRRMIVALK 139 A + LRR + ++ Sbjct 134 ---AEAVGEEELRRALATIR 150 >gi|326777803|ref|ZP_08237068.1| regulatory protein MarR [Streptomyces cf. griseus XylebKG-1] gi|326658136|gb|EGE42982.1| regulatory protein MarR [Streptomyces griseus XylebKG-1] Length=167 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/134 (40%), Positives = 67/134 (50%), Gaps = 0/134 (0%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQGV 64 ++R F L G + +A G T ARWQ+L V L V AR +G+TRQ V Sbjct 16 LSRAAVTAFRLNGQFLSVADEMARSGGLTAARWQVLGAVLVEPLPVAGIARAMGITRQSV 75 Query 65 QRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAAL 124 QR+A+ LV GLAE NP HR + LL T GR + I RLA + A L Sbjct 76 QRIADLLVERGLAEYAENPAHRRAKLLRATAAGREAVTRIGPPHAEFAARLAGELGVANL 135 Query 125 QATRDSLRRMIVAL 138 AT D+L R+ AL Sbjct 136 AATVDALDRLSKAL 149 >gi|300781268|ref|ZP_07091122.1| MarR-family transcriptional regulator [Corynebacterium genitalium ATCC 33030] gi|300532975|gb|EFK54036.1| MarR-family transcriptional regulator [Corynebacterium genitalium ATCC 33030] Length=158 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/137 (34%), Positives = 69/137 (51%), Gaps = 0/137 (0%) Query 3 DEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQ 62 D + LV +FE+A L + + + A W++L +V D LTV + +RRLG RQ Sbjct 9 DALTDLVLPLFEVAAELESAAMSITDGTSLSPAMWKVLGLVIDEPLTVAEISRRLGNARQ 68 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 VQR+AN V G A+ + NP H+ SPLL LT G+ L + R N + + Sbjct 69 SVQRLANVAVETGAAQWQSNPAHKRSPLLALTPVGKANLAELRPRQHRWANAVGGKMGEE 128 Query 123 ALQATRDSLRRMIVALK 139 LQ + R++ L+ Sbjct 129 ELQCLSSHIERLLSTLR 145 >gi|170701805|ref|ZP_02892738.1| transcriptional regulator, MarR family [Burkholderia ambifaria IOP40-10] gi|170133284|gb|EDT01679.1| transcriptional regulator, MarR family [Burkholderia ambifaria IOP40-10] Length=148 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/99 (42%), Positives = 52/99 (53%), Gaps = 2/99 (2%) Query 11 DVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGVTRQGVQRVA 68 VF L GLL G AA G T ARWQ+L ++ A +PQ A +G+TRQ V + Sbjct 13 SVFRLNGLLIEWGNTFAAPHGLTSARWQVLGAIAMAPDAPNIPQIADAMGITRQAVLKQV 72 Query 69 NDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 N L GL + NP H+ SPL LT G QA+ E+ Sbjct 73 NVLTEEGLVQPLPNPTHKRSPLYALTPRGAAAYQAVVEQ 111 >gi|78061615|ref|YP_371523.1| MarR family transcriptional regulator [Burkholderia sp. 383] gi|77969500|gb|ABB10879.1| transcriptional regulator, MarR family [Burkholderia sp. 383] Length=161 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/108 (39%), Positives = 55/108 (51%), Gaps = 2/108 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVS--DRALTVPQAARRLGV 59 S ++ + VF L GLL G A G T ARWQ+L +S A +PQ A +G+ Sbjct 17 SAKLTAVALSVFRLNGLLIEWGNTFAGPHGLTSARWQVLGAISLAPDAPNIPQIADAMGI 76 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITER 107 TRQ V + N L GL + NP H+ SPL LT G QA+ E+ Sbjct 77 TRQAVLKQVNVLTDEGLVQSLPNPAHKRSPLYALTPRGEAAYQAVVEQ 124 >gi|336115928|ref|YP_004570694.1| putative MarR family transcriptional regulator [Microlunatus phosphovorus NM-1] gi|334683706|dbj|BAK33291.1| putative MarR family transcriptional regulator [Microlunatus phosphovorus NM-1] Length=183 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/138 (38%), Positives = 68/138 (50%), Gaps = 2/138 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARR--LGV 59 D + LV VFEL G + + ++ G T A WQ+L D L V + ARR LG+ Sbjct 26 GDALTELVLPVFELNGEFLAAAKDISKPAGLTPAWWQVLGATLDEPLAVAEIARRVGLGL 85 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 RQ VQR A+ LV G A R NP HR + LL T GR L + V N + V Sbjct 86 ARQSVQRTADLLVDKGWAAYRDNPQHRRAKLLEPTPTGRDTLLRLRNAQHVWANTVGTEV 145 Query 120 DPAALQATRDSLRRMIVA 137 L+A ++RR+I A Sbjct 146 GADELKAALGTIRRIIDA 163 >gi|84387025|ref|ZP_00990048.1| putative transcription regulator protein [Vibrio splendidus 12B01] gi|84378100|gb|EAP94960.1| putative transcription regulator protein [Vibrio splendidus 12B01] Length=145 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/137 (29%), Positives = 73/137 (54%), Gaps = 9/137 (6%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVV--SDRALTVPQAARRLGVTRQ 62 ++ ++F+++GLL G+ + G + ARW+++ + SD +TV Q AR +G +RQ Sbjct 8 FTKIALEIFKVSGLLNAEGDKLTEELGLSSARWKVMGAIEKSDDLVTVSQIARIMGQSRQ 67 Query 63 GVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPA 122 QRV + +V GL NP+H+ + L+ +TE G+ + ++ V A+ ++ Sbjct 68 ATQRVTDIMVKDGLLTWLDNPNHKKAKLVNMTEKGKEAYSLLDKKQEVWAESGAEGIE-- 125 Query 123 ALQATRDSLRRMIVALK 139 RD L + ++ LK Sbjct 126 -----RDELDKALITLK 137 >gi|296115834|ref|ZP_06834459.1| putative transcriptional regulator, MarR family protein [Gluconacetobacter hansenii ATCC 23769] gi|295977600|gb|EFG84353.1| putative transcriptional regulator, MarR family protein [Gluconacetobacter hansenii ATCC 23769] Length=157 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/137 (36%), Positives = 70/137 (52%), Gaps = 4/137 (2%) Query 8 LVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVV--SDRALTVPQAARRLGVTRQGVQ 65 L+ VF LL G+ + + G T ARWQ+L + ++R V AR LG RQ VQ Sbjct 16 LILTVFRTNNLLLLWGDRLVSSFGLTSARWQILGAIVHAERPQPVAWLARDLGANRQNVQ 75 Query 66 RVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQ 125 R+ NDL GL NP HR + L+VLTE GR + A+ E N LA+ ++ +Q Sbjct 76 RIVNDLHHEGLVVFAPNPHHRRAHLVVLTEKGREIYDAVIEVYTPRVNALAEEMNIDDIQ 135 Query 126 ATRDSLRRMIVALKAER 142 + ++ I+ ER Sbjct 136 VACNLMK--ILKFHIER 150 >gi|239989498|ref|ZP_04710162.1| MarR family transcriptional regulator [Streptomyces roseosporus NRRL 11379] gi|291446516|ref|ZP_06585906.1| MarR-family transcriptional regulator [Streptomyces roseosporus NRRL 15998] gi|291349463|gb|EFE76367.1| MarR-family transcriptional regulator [Streptomyces roseosporus NRRL 15998] Length=166 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/134 (41%), Positives = 66/134 (50%), Gaps = 0/134 (0%) Query 5 IARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQGV 64 ++R VF L G E +A G T ARWQ+L V L V AR +G+TRQ V Sbjct 17 LSRAALTVFRLNGQFLSVAEELARPGGLTAARWQVLGAVLVEPLPVAGIARTMGITRQSV 76 Query 65 QRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAAL 124 QR+A+ LV GLAE NP HR + LL TE GR + I RLA V L Sbjct 77 QRIADLLVERGLAEYTENPAHRRAKLLRATEAGRDAVSRIGPPHAEFAARLAGEVGVENL 136 Query 125 QATRDSLRRMIVAL 138 T +L R+ AL Sbjct 137 AETLAALERLSEAL 150 >gi|218460794|ref|ZP_03500885.1| MarR family transcriptional regulatory protein [Rhizobium etli Kim 5] Length=158 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/142 (35%), Positives = 69/142 (49%), Gaps = 2/142 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLS--VVSDRALTVPQAARRLGV 59 D + L+ +F + L G+ + A G T ARWQ+L V +DR V AR LG Sbjct 10 GDALTELILSMFRVNNLTLTWGDRLVAAFGLTSARWQILGAIVYADRPQPVAWLARDLGA 69 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 RQ VQR+ NDL GL NP HR + L+VLT+ GR+ A N +A + Sbjct 70 NRQNVQRIVNDLHGEGLVAFEPNPHHRRAQLVVLTDKGRQTYDAAIAAYNPRVNAMAAGL 129 Query 120 DPAALQATRDSLRRMIVALKAE 141 A +Q + R+ +L+ E Sbjct 130 SLAEIQTAHRVMTRLRHSLEGE 151 >gi|163850875|ref|YP_001638918.1| regulatory protein MarR [Methylobacterium extorquens PA1] gi|163662480|gb|ABY29847.1| regulatory protein MarR [Methylobacterium extorquens PA1] Length=172 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/129 (40%), Positives = 69/129 (54%), Gaps = 2/129 (1%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQA--ARRLGV 59 +D LV ++F +G L +G+ + G T ARWQ+L V+ A +P A AR +G+ Sbjct 18 ADAATALVLEIFRSSGALLAAGDRLVGDLGLTSARWQVLGAVALAAQPLPVARIARDMGI 77 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 TRQGVQR N+L GL NP H + L++LT GR A R LA + Sbjct 78 TRQGVQRTVNELAKAGLVSFADNPHHLRARLVLLTPAGRDAYAAAAARQAPWAAALARGL 137 Query 120 DPAALQATR 128 DPAAL+A R Sbjct 138 DPAALEAAR 146 >gi|218529696|ref|YP_002420512.1| MarR family transcriptional regulator [Methylobacterium chloromethanicum CM4] gi|218521999|gb|ACK82584.1| transcriptional regulator, MarR family [Methylobacterium chloromethanicum CM4] Length=163 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/143 (40%), Positives = 75/143 (53%), Gaps = 3/143 (2%) Query 2 SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQA--ARRLGV 59 +D LV ++F +G L +G+ + G T ARWQ+L V+ A +P A AR +G+ Sbjct 9 ADAATALVLEIFRSSGALLAAGDRLVGDLGLTSARWQVLGAVALAAQPLPVARIARDMGM 68 Query 60 TRQGVQRVANDLVVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAV 119 TRQGVQR N+L GL NP H + L++LT GR A R LA + Sbjct 69 TRQGVQRTVNELAKAGLVSFADNPHHLRARLVLLTPAGRDAYAAAAARQAPWAAALARGL 128 Query 120 DPAALQATRDSLRRMIVALKAER 142 DPAAL+A R +L R I ER Sbjct 129 DPAALEAAR-ALVRTIGERAGER 150 Lambda K H 0.322 0.133 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129250525032 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40