BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2012
Length=164
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609149|ref|NP_216528.1| hypothetical protein Rv2012 [Mycoba... 341 2e-92
gi|294996948|ref|ZP_06802639.1| hypothetical protein Mtub2_21188... 338 1e-91
gi|340627021|ref|YP_004745473.1| hypothetical protein MCAN_20321... 323 4e-87
gi|308374462|ref|ZP_07436158.2| hypothetical protein TMFG_03522 ... 300 5e-80
gi|254232182|ref|ZP_04925509.1| conserved hypothetical protein [... 268 2e-70
gi|116625477|ref|YP_827633.1| hypothetical protein Acid_6423 [Ca... 175 2e-42
gi|291615246|ref|YP_003525403.1| hypothetical protein Slit_2791 ... 170 5e-41
gi|183220906|ref|YP_001838902.1| hypothetical protein LEPBI_I151... 137 5e-31
gi|270159763|ref|ZP_06188419.1| conserved hypothetical protein [... 134 6e-30
gi|326405836|gb|ADZ62907.1| conserved hypothetical protein [Lact... 132 2e-29
gi|15672242|ref|NP_266416.1| hypothetical protein L58584 [Lactoc... 130 4e-29
gi|281490748|ref|YP_003352728.1| hypothetical protein LLKF_0256 ... 130 7e-29
gi|254380569|ref|ZP_04995935.1| conserved hypothetical protein [... 123 7e-27
gi|116511082|ref|YP_808298.1| hypothetical protein LACR_0264 [La... 122 1e-26
gi|343180249|dbj|BAK58588.1| conserved hypothetical protein [Lac... 120 7e-26
gi|290978124|ref|XP_002671786.1| predicted protein [Naegleria gr... 112 2e-23
gi|329115832|ref|ZP_08244549.1| hypothetical protein SPB_0741 [S... 57.4 8e-07
gi|333905137|ref|YP_004479008.1| hypothetical protein STP_0888 [... 56.2 2e-06
gi|319758847|gb|ADV70789.1| Phage envelope protein [Streptococcu... 55.8 2e-06
gi|146319420|ref|YP_001199132.1| Phage envelope protein [Strepto... 55.1 3e-06
gi|223934264|ref|ZP_03626192.1| conserved hypothetical protein [... 53.9 8e-06
gi|302024386|ref|ZP_07249597.1| hypothetical protein Ssui0_07469... 52.8 2e-05
gi|222153170|ref|YP_002562347.1| hypothetical protein SUB1022 [S... 49.7 2e-04
gi|330685779|gb|EGG97414.1| hypothetical protein SEVCU121_0897 [... 48.9 3e-04
gi|213863409|ref|ZP_03386664.1| Phage envelope protein [Salmonel... 48.1 4e-04
gi|239636726|ref|ZP_04677728.1| phage envelope protein [Staphylo... 47.8 6e-04
gi|327405778|ref|YP_004346616.1| hypothetical protein Fluta_3812... 44.3 0.006
gi|333379052|ref|ZP_08470779.1| hypothetical protein HMPREF9456_... 44.3 0.006
gi|73661534|ref|YP_300315.1| hypothetical protein SSP0225 [Staph... 43.5 0.012
gi|282922832|ref|ZP_06330522.1| hypothetical protein SARG_00484 ... 42.4 0.023
gi|256425308|ref|YP_003125961.1| phage envelope protein [Chitino... 42.4 0.026
gi|296158611|ref|ZP_06841441.1| conserved hypothetical protein [... 41.6 0.038
gi|57652608|ref|YP_185311.1| hypothetical protein SACOL0419 [Sta... 41.6 0.040
gi|253730711|ref|ZP_04864876.1| bacteriophage envelope protein [... 41.6 0.042
gi|171464324|ref|YP_001798437.1| hypothetical protein Pnec_1769 ... 41.2 0.051
gi|110640163|ref|YP_680373.1| hypothetical protein CHU_3798 [Cyt... 40.8 0.064
gi|49482578|ref|YP_039802.1| hypothetical protein SAR0345 [Staph... 40.8 0.076
gi|82750059|ref|YP_415800.1| hypothetical protein SAB0298c [Stap... 40.4 0.082
gi|283781878|ref|YP_003372633.1| hypothetical protein Psta_4123 ... 40.4 0.084
gi|298693686|gb|ADI96908.1| hypothetical protein SAOV_0372c [Sta... 40.0 0.11
gi|323438807|gb|EGA96545.1| hypothetical protein SAO11_2326 [Sta... 40.0 0.11
gi|258424599|ref|ZP_05687476.1| conserved hypothetical protein [... 40.0 0.11
gi|283469655|emb|CAQ48866.1| phage envelope protein [Staphylococ... 40.0 0.12
gi|329847398|ref|ZP_08262426.1| hypothetical protein ABI_04620 [... 39.7 0.13
gi|341845840|gb|EGS87040.1| hypothetical protein SA21269_2205 [S... 39.7 0.14
gi|282915670|ref|ZP_06323441.1| hypothetical protein SATG_02391 ... 39.7 0.14
gi|21282053|ref|NP_645141.1| hypothetical protein MW0324 [Staphy... 39.7 0.14
gi|302332085|gb|ADL22278.1| putative bacteriophage envelope prot... 39.3 0.19
gi|344176620|emb|CCC87079.1| conserved hypothetical protein [Sta... 39.3 0.19
gi|15923338|ref|NP_370872.1| hypothetical protein SAV0348 [Staph... 39.3 0.19
>gi|15609149|ref|NP_216528.1| hypothetical protein Rv2012 [Mycobacterium tuberculosis H37Rv]
gi|15841494|ref|NP_336531.1| hypothetical protein MT2067 [Mycobacterium tuberculosis CDC1551]
gi|31793192|ref|NP_855685.1| hypothetical protein Mb2035 [Mycobacterium bovis AF2122/97]
62 more sequence titles
Length=164
Score = 341 bits (875), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/164 (100%), Positives = 164/164 (100%), Gaps = 0/164 (0%)
Query 1 MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN 60
MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN
Sbjct 1 MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN 60
Query 61 TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA 120
TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA
Sbjct 61 TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA 120
Query 121 AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS 164
AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS
Sbjct 121 AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS 164
>gi|294996948|ref|ZP_06802639.1| hypothetical protein Mtub2_21188 [Mycobacterium tuberculosis
210]
Length=164
Score = 338 bits (868), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/164 (99%), Positives = 163/164 (99%), Gaps = 0/164 (0%)
Query 1 MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN 60
MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN
Sbjct 1 MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN 60
Query 61 TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA 120
TWWLPAMQSLYETDYGPVLDQGVP IDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA
Sbjct 61 TWWLPAMQSLYETDYGPVLDQGVPRIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA 120
Query 121 AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS 164
AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS
Sbjct 121 AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS 164
>gi|340627021|ref|YP_004745473.1| hypothetical protein MCAN_20321 [Mycobacterium canettii CIPT
140010059]
gi|340005211|emb|CCC44364.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=159
Score = 323 bits (829), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 158/164 (97%), Positives = 159/164 (97%), Gaps = 5/164 (3%)
Query 1 MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN 60
MLSKSKRSCRRRE+LRIGEKMS LQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN
Sbjct 1 MLSKSKRSCRRRESLRIGEKMS-----LQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN 55
Query 61 TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA 120
TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA
Sbjct 56 TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA 115
Query 121 AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS 164
AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS
Sbjct 116 AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS 159
>gi|308374462|ref|ZP_07436158.2| hypothetical protein TMFG_03522 [Mycobacterium tuberculosis SUMu006]
gi|308341839|gb|EFP30690.1| hypothetical protein TMFG_03522 [Mycobacterium tuberculosis SUMu006]
gi|339294937|gb|AEJ47048.1| hypothetical protein CCDC5079_1858 [Mycobacterium tuberculosis
CCDC5079]
Length=144
Score = 300 bits (767), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 21 MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD 80
MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD
Sbjct 1 MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD 60
Query 81 QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY 140
QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY
Sbjct 61 QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY 120
Query 141 FGLHDQTYMEHYAAVEPSGGAPTS 164
FGLHDQTYMEHYAAVEPSGGAPTS
Sbjct 121 FGLHDQTYMEHYAAVEPSGGAPTS 144
>gi|254232182|ref|ZP_04925509.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|308232004|ref|ZP_07414586.2| hypothetical protein TMAG_02194 [Mycobacterium tuberculosis SUMu001]
gi|308369589|ref|ZP_07418369.2| hypothetical protein TMBG_00552 [Mycobacterium tuberculosis SUMu002]
11 more sequence titles
Length=128
Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 37 MNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFD 96
MNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFD
Sbjct 1 MNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFD 60
Query 97 RTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVE 156
RTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVE
Sbjct 61 RTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVE 120
Query 157 PSGGAPTS 164
PSGGAPTS
Sbjct 121 PSGGAPTS 128
>gi|116625477|ref|YP_827633.1| hypothetical protein Acid_6423 [Candidatus Solibacter usitatus
Ellin6076]
gi|116228639|gb|ABJ87348.1| conserved hypothetical protein [Candidatus Solibacter usitatus
Ellin6076]
Length=139
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/136 (63%), Positives = 101/136 (75%), Gaps = 0/136 (0%)
Query 21 MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD 80
MS I NL AAQ+ AI NRP V GFP+LAE LRRAGV N W+LPA QSLY T+ GPV+
Sbjct 1 MSKAIENLAAAQKHAIANRPKVGGFPYLAEALRRAGVIRNLWFLPACQSLYLTNDGPVVS 60
Query 81 QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY 140
QG PL+ G +VPAFDR AL++ALR DQAGQ++F EF AA+WRAGVLRY VD RT Y
Sbjct 61 QGTPLVAGTTDVPAFDRDALISALRTDQAGQSTFPEFLAASWRAGVLRYDVDFAARTVAY 120
Query 141 FGLHDQTYMEHYAAVE 156
+G + + Y+E Y AVE
Sbjct 121 YGCNGEEYVESYPAVE 136
>gi|291615246|ref|YP_003525403.1| hypothetical protein Slit_2791 [Sideroxydans lithotrophicus ES-1]
gi|291585358|gb|ADE13016.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
Length=137
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/136 (59%), Positives = 102/136 (75%), Gaps = 0/136 (0%)
Query 21 MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD 80
MS I NL++AQ+ A+ RP V+GFP+LAETLRRAGV N W LP+ QSLY T+ GPV+
Sbjct 1 MSIAIENLKSAQQRAMAGRPKVSGFPYLAETLRRAGVTRNIWSLPSCQSLYLTEKGPVVV 60
Query 81 QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY 140
QG PL+ G+A+VP F R AL+TALR DQAG ++F EF A WRAGV++Y VD RTCTY
Sbjct 61 QGSPLVTGMADVPPFSRDALITALRTDQAGNSTFPEFLTATWRAGVVKYDVDFAARTCTY 120
Query 141 FGLHDQTYMEHYAAVE 156
+G+ ++ Y+E Y AVE
Sbjct 121 YGVGEEKYVESYPAVE 136
>gi|183220906|ref|YP_001838902.1| hypothetical protein LEPBI_I1519 [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911002|ref|YP_001962557.1| phage-like protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775678|gb|ABZ93979.1| Phage related protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779328|gb|ABZ97626.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length=139
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/135 (49%), Positives = 87/135 (65%), Gaps = 0/135 (0%)
Query 21 MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD 80
M+ T L AQ+ A+ RP V GF LAE LR AGV N W LP+ QS+Y G V+
Sbjct 1 MANLTTKLIEAQKLAMSLRPKVGGFLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQ 60
Query 81 QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY 140
QG P++ G+ E+P FD L+ ALR DQ G++SF EF +AW AGV+ Y VD E+R Y
Sbjct 61 QGNPIVMGIHEIPKFDSEGLIRALRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVY 120
Query 141 FGLHDQTYMEHYAAV 155
+G++D++YME Y AV
Sbjct 121 YGVNDESYMEEYPAV 135
>gi|270159763|ref|ZP_06188419.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289165466|ref|YP_003455604.1| hypothetical protein LLO_2140 [Legionella longbeachae NSW150]
gi|269988102|gb|EEZ94357.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288858639|emb|CBJ12532.1| Conserved hypothetical protein [Legionella longbeachae NSW150]
Length=141
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/136 (48%), Positives = 87/136 (64%), Gaps = 0/136 (0%)
Query 21 MSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD 80
M+ I L A + AI RP + GFP +AE LR+AGV TN W LP+ QS+Y G V+
Sbjct 1 MNQIIEKLTEALKYAISIRPNIGGFPIIAEVLRQAGVETNRWSLPSCQSIYIMSEGSVVQ 60
Query 81 QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTY 140
G PL+ G+ EVP FDR AL+ A+R DQ G+++F EF +AW AGV+ Y V+ R Y
Sbjct 61 VGTPLVTGMYEVPKFDRDALIAAIRTDQEGKSTFPEFLHSAWDAGVIGYDVNFVGREVVY 120
Query 141 FGLHDQTYMEHYAAVE 156
+G++ + Y+E Y AVE
Sbjct 121 YGVNSERYVEKYPAVE 136
>gi|326405836|gb|ADZ62907.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length=137
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/132 (50%), Positives = 81/132 (62%), Gaps = 0/132 (0%)
Query 25 ITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVP 84
I +Q A + A RP V GFP+LAE +R AGV N W LPA QS + T G + P
Sbjct 4 IELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPAGQSTFWTSAGVISVTNSP 63
Query 85 LIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLH 144
++ G EVP FD+ AL+ ALRADQAGQT+F EF +A W AGV+ Y D R TY G
Sbjct 64 MVSGFHEVPVFDQEALIKALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYLGSQ 123
Query 145 DQTYMEHYAAVE 156
++Y+E Y AVE
Sbjct 124 GESYVEAYPAVE 135
>gi|15672242|ref|NP_266416.1| hypothetical protein L58584 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723120|gb|AAK04358.1|AE006263_5 hypothetical protein L58584 [Lactococcus lactis subsp. lactis
Il1403]
Length=137
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/132 (49%), Positives = 80/132 (61%), Gaps = 0/132 (0%)
Query 25 ITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVP 84
I +Q A + A RP V GFP+LAE +R AGV N W LP QS + T G + P
Sbjct 4 IELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPVGQSTFWTSAGVISVTNSP 63
Query 85 LIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLH 144
++ G EVP FD+ AL+ ALRADQAGQT+F EF +A W AGV+ Y D R TY G
Sbjct 64 MVSGFHEVPVFDQEALIKALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYLGSQ 123
Query 145 DQTYMEHYAAVE 156
++Y+E Y AVE
Sbjct 124 GESYVEAYPAVE 135
>gi|281490748|ref|YP_003352728.1| hypothetical protein LLKF_0256 [Lactococcus lactis subsp. lactis
KF147]
gi|281374517|gb|ADA64038.1| Hypothetical protein LLKF_0256 [Lactococcus lactis subsp. lactis
KF147]
Length=137
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/131 (49%), Positives = 80/131 (62%), Gaps = 0/131 (0%)
Query 25 ITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVP 84
I +Q A + A RP V GFP+LAE +R AGV N W LPA QS + T G + P
Sbjct 4 IELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPAGQSTFWTSAGVISVTNSP 63
Query 85 LIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLH 144
++ G EVP FD+ AL+ ALRADQAGQT+F EF +A W AGV+ Y D R TY G
Sbjct 64 MVSGFHEVPVFDQEALIKALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYLGSQ 123
Query 145 DQTYMEHYAAV 155
++Y+E Y AV
Sbjct 124 GESYVEAYPAV 134
>gi|254380569|ref|ZP_04995935.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339480|gb|EDX20446.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=140
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/131 (51%), Positives = 81/131 (62%), Gaps = 0/131 (0%)
Query 25 ITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVP 84
I L+AA RP V GFP+LAE+LR+AGV +PA LY T++G ++ QG P
Sbjct 7 IGQLRAALERGAAVRPQVGGFPYLAESLRQAGVTRCRMAVPANAFLYLTEHGDIVVQGEP 66
Query 85 LIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLH 144
L+ G A P FDR ALV ALRADQAG+T+F EF W AG+ Y VD RTCTY+G
Sbjct 67 LVTGFATAPPFDRAALVEALRADQAGRTTFPEFVRGCWDAGIAWYDVDTTARTCTYYGTA 126
Query 145 DQTYMEHYAAV 155
+Y E Y AV
Sbjct 127 GDSYTEDYPAV 137
>gi|116511082|ref|YP_808298.1| hypothetical protein LACR_0264 [Lactococcus lactis subsp. cremoris
SK11]
gi|125623140|ref|YP_001031623.1| hypothetical protein llmg_0267 [Lactococcus lactis subsp. cremoris
MG1363]
gi|116106736|gb|ABJ71876.1| Phage envelope protein [Lactococcus lactis subsp. cremoris SK11]
gi|124491948|emb|CAL96874.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300069888|gb|ADJ59288.1| hypothetical protein LLNZ_01400 [Lactococcus lactis subsp. cremoris
NZ9000]
Length=137
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/131 (49%), Positives = 79/131 (61%), Gaps = 0/131 (0%)
Query 25 ITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVP 84
I ++ A + A RP V GFP+LAE LR AGV N W LPA QS + T G + P
Sbjct 4 IELVEGAMKKAETIRPKVGGFPYLAECLREAGVLKNVWTLPAGQSTFWTVAGVISLTNAP 63
Query 85 LIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLH 144
++ G EV FDR AL+ ALRADQAG+T+F EF +A W AGV+ Y + E R TY G
Sbjct 64 MLTGFQEVATFDREALIKALRADQAGKTTFPEFLSATWEAGVIDYEANFEKRIVTYRGAQ 123
Query 145 DQTYMEHYAAV 155
+ Y+E Y AV
Sbjct 124 GEEYVEAYPAV 134
>gi|343180249|dbj|BAK58588.1| conserved hypothetical protein [Lactococcus garvieae ATCC 49156]
gi|343182217|dbj|BAK60555.1| conserved hypothetical protein [Lactococcus garvieae Lg2]
Length=143
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/129 (45%), Positives = 78/129 (61%), Gaps = 0/129 (0%)
Query 27 NLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLI 86
N+Q A A GFP+LAE LR+ G+ N W LP+ S Y ++ G +++ G PLI
Sbjct 5 NIQRAMLKANHVGAESKGFPYLAECLRQEGIVKNIWHLPSGDSFYFSETGSLVNPGNPLI 64
Query 87 DGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
V P FD+ ALV +RA+QAG+ SF EF A+ W+AG++RY VD R +YFG DQ
Sbjct 65 GRVGPCPDFDQIALVQNIRANQAGKISFSEFLASLWKAGIIRYEVDFTTRQMSYFGAFDQ 124
Query 147 TYMEHYAAV 155
Y E Y +V
Sbjct 125 VYQESYPSV 133
>gi|290978124|ref|XP_002671786.1| predicted protein [Naegleria gruberi]
gi|284085358|gb|EFC39042.1| predicted protein [Naegleria gruberi]
Length=145
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 78/132 (60%), Gaps = 2/132 (1%)
Query 25 ITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYG-PVLDQGV 83
I N+ A + A P V FP+LAETLRRAG+ N W+LP S+Y T G V++Q
Sbjct 4 IENINKAFQLAFKISPKVGKFPYLAETLRRAGIERNRWFLPGCTSIYYTSSGEKVVNQME 63
Query 84 PLID-GVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFG 142
L+ G+ E+ F+R +V A+R DQAG+T F +F W GV+ Y VD NR CTY+G
Sbjct 64 SLLPYGMHEIKPFNRNLVVDAIRKDQAGETEFPQFLKCIWEGGVVSYEVDFVNRVCTYYG 123
Query 143 LHDQTYMEHYAA 154
++ + E Y +
Sbjct 124 ADEKEFYEEYYS 135
>gi|329115832|ref|ZP_08244549.1| hypothetical protein SPB_0741 [Streptococcus parauberis NCFD
2020]
gi|326906237|gb|EGE53151.1| hypothetical protein SPB_0741 [Streptococcus parauberis NCFD
2020]
Length=127
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (32%), Positives = 51/103 (50%), Gaps = 2/103 (1%)
Query 44 GFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTA 103
FP L + G+ +NT + +++Y G + ++ VAE D+ +
Sbjct 18 NFPMLVQAFLDLGMVSNTVNIKDGKAIYNDKDGNQVAMAAFQVEAVAE--NLDKDYFMQQ 75
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
L+ Q+GQT F F AG+ ++ VDL +TCTYF L+DQ
Sbjct 76 LKLHQSGQTDFPTFCKDTADAGIYKWDVDLLVKTCTYFDLNDQ 118
>gi|333905137|ref|YP_004479008.1| hypothetical protein STP_0888 [Streptococcus parauberis KCTC
11537]
gi|333120402|gb|AEF25336.1| hypothetical protein STP_0888 [Streptococcus parauberis KCTC
11537]
Length=127
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (32%), Positives = 50/103 (49%), Gaps = 2/103 (1%)
Query 44 GFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTA 103
FP L + G+ +NT + +++Y G + ++ VAE D+ +
Sbjct 18 NFPMLVQAFLDLGMVSNTVNIKDGKAIYNDKDGNQVAMAAFQVEAVAE--NLDKDYFMQQ 75
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
L Q+GQT F F AG+ ++ VDL +TCTYF L+DQ
Sbjct 76 LILHQSGQTDFSTFCKDTADAGIYKWDVDLLVKTCTYFDLNDQ 118
>gi|319758847|gb|ADV70789.1| Phage envelope protein [Streptococcus suis JS14]
Length=131
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (33%), Positives = 56/114 (50%), Gaps = 4/114 (3%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD-QGVPLIDGVAEVPAFDRTALVTA 103
FP L + G+ N + + Q Y + G L+ QG + V++ D+ VT
Sbjct 19 FPKLIAYFKDLGMVENIVDIQSGQVTYRSQTGQTLEKQGYQVTIPVSDQANLDQ--FVTI 76
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ-TYMEHYAAVE 156
LR QAGQT F F AG+ ++V+DLE TC+Y +Q ++E +VE
Sbjct 77 LRNHQAGQTDFLTFCQETAEAGIYKWVIDLEAMTCSYMDKAEQAVFVETIPSVE 130
>gi|146319420|ref|YP_001199132.1| Phage envelope protein [Streptococcus suis 05ZYH33]
gi|146321624|ref|YP_001201335.1| Phage envelope protein [Streptococcus suis 98HAH33]
gi|253752443|ref|YP_003025584.1| hypothetical protein SSUSC84_1598 [Streptococcus suis SC84]
8 more sequence titles
Length=159
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/114 (33%), Positives = 56/114 (50%), Gaps = 4/114 (3%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD-QGVPLIDGVAEVPAFDRTALVTA 103
FP L + G+ N + + Q Y + G L+ QG + V++ D+ VT
Sbjct 47 FPKLIAYFKDLGMVENIVDIQSGQVTYRSQTGQTLEKQGYQVTIPVSDQANLDQ--FVTI 104
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ-TYMEHYAAVE 156
LR QAGQT F F AG+ ++V+DLE TC+Y +Q ++E +VE
Sbjct 105 LRNHQAGQTDFLTFCQETAEAGIYKWVIDLEAMTCSYMDKAEQAVFVETIPSVE 158
>gi|223934264|ref|ZP_03626192.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gi|330833384|ref|YP_004402209.1| hypothetical protein SSUST3_1608 [Streptococcus suis ST3]
gi|223897063|gb|EEF63496.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gi|329307607|gb|AEB82023.1| conserved hypothetical protein [Streptococcus suis ST3]
Length=131
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/114 (33%), Positives = 56/114 (50%), Gaps = 4/114 (3%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQ-GVPLIDGVAEVPAFDRTALVTA 103
FP L + G+ N + + Q Y + G L++ G + V++ D+ VT
Sbjct 19 FPKLIAYFKDLGMVENIVDIQSGQVTYRSQTGQTLEKTGYQVTIPVSDQANLDQ--FVTI 76
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ-TYMEHYAAVE 156
LR QAGQT F F AGV ++V+DLE TC+Y +Q ++E +VE
Sbjct 77 LRNHQAGQTDFPTFCQETAEAGVYKWVIDLEAMTCSYLDQAEQAVFVEAVPSVE 130
>gi|302024386|ref|ZP_07249597.1| hypothetical protein Ssui0_07469 [Streptococcus suis 05HAS68]
Length=159
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (33%), Positives = 56/114 (50%), Gaps = 4/114 (3%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQ-GVPLIDGVAEVPAFDRTALVTA 103
FP L + G+ N + + Q Y + G L++ G + V++ D+ VT
Sbjct 47 FPKLIAYFKDLGMVENIVDIQSGQVTYRSQTGQTLEKTGYQVTIPVSDQANLDQ--FVTI 104
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ-TYMEHYAAVE 156
LR QAGQT F F AGV ++V+DLE TC+Y +Q ++E +VE
Sbjct 105 LRNHQAGQTDFPTFCQETAEAGVYKWVIDLEAMTCSYLDQAEQAVFVEAVPSVE 158
>gi|222153170|ref|YP_002562347.1| hypothetical protein SUB1022 [Streptococcus uberis 0140J]
gi|222113983|emb|CAR42284.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length=126
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (31%), Positives = 49/113 (44%), Gaps = 2/113 (1%)
Query 35 AIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPA 94
A R + N FP L + G+ T + Q++Y T G D ++ V
Sbjct 8 AAQERFSGNDFPSLVKAYMALGIVTYAINIQIGQAIYVTKDGQKCDLPAYQVEDVKSKS- 66
Query 95 FDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQT 147
D + + LR QA +T F F G+ R+VVDL +TC YF L D+
Sbjct 67 -DPSQFLEKLRNHQAKETDFPTFCQDYATNGICRWVVDLVAKTCRYFDLEDKV 118
>gi|330685779|gb|EGG97414.1| hypothetical protein SEVCU121_0897 [Staphylococcus epidermidis
VCU121]
Length=129
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (28%), Positives = 50/104 (49%), Gaps = 3/104 (2%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLY-ETDYGPVLDQGVPLIDGVAEVPAFDRTALVTA 103
FP L + + G+ +N + S+Y T+ + +GV + +A+ D +
Sbjct 20 FPKLFKAFKDMGMVSNEVNIQHGTSVYTNTNEQTITAEGVKVSHPIADTSNTDEVKDI-- 77
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQT 147
L+ QAGQT F F +AG+ ++ +D+ TC+Y L QT
Sbjct 78 LKRHQAGQTDFPTFCEEMAQAGIYKWYIDINAGTCSYIDLKQQT 121
>gi|213863409|ref|ZP_03386664.1| Phage envelope protein [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length=81
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/69 (40%), Positives = 38/69 (56%), Gaps = 4/69 (5%)
Query 92 VPAFDRTAL---VTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ-T 147
+P D+ L VT LR QAGQT F F AG+ ++V+DLE TC+Y +Q
Sbjct 12 IPVSDQANLDQFVTILRNHQAGQTDFLTFCQETAEAGIYKWVIDLEAMTCSYMDKAEQAV 71
Query 148 YMEHYAAVE 156
++E +VE
Sbjct 72 FVETIPSVE 80
>gi|239636726|ref|ZP_04677728.1| phage envelope protein [Staphylococcus warneri L37603]
gi|239598081|gb|EEQ80576.1| phage envelope protein [Staphylococcus warneri L37603]
Length=129
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (28%), Positives = 50/104 (49%), Gaps = 3/104 (2%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLY-ETDYGPVLDQGVPLIDGVAEVPAFDRTALVTA 103
FP L + + G+ +N + S+Y TD + +GV + +A+ + +
Sbjct 20 FPMLFKAFKDMGMVSNEVNIQHGTSVYTNTDGQTITAEGVKVSHPIADTSHVEEVKDI-- 77
Query 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQT 147
L QAGQT F F +AG+ ++ +D+ TC+Y L+ QT
Sbjct 78 LTRHQAGQTDFPTFCEEMAQAGIYKWFIDINAGTCSYIDLNQQT 121
>gi|327405778|ref|YP_004346616.1| hypothetical protein Fluta_3812 [Fluviicola taffensis DSM 16823]
gi|327321286|gb|AEA45778.1| hypothetical protein Fluta_3812 [Fluviicola taffensis DSM 16823]
Length=130
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/97 (24%), Positives = 43/97 (45%), Gaps = 1/97 (1%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTAL 104
FP + ++R GV++ W+ ++Y + G + P + + D L
Sbjct 20 FPQYIQEIKRFGVKSFETWVSDSHTVYFGESG-FQTESQPKYEKLTVADRTDIDQFKVRL 78
Query 105 RADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYF 141
+ Q GQT + F + GV ++++DL TC Y+
Sbjct 79 KIHQQGQTDYYTFCKDCAKTGVEKWIMDLNAMTCIYY 115
>gi|333379052|ref|ZP_08470779.1| hypothetical protein HMPREF9456_02374 [Dysgonomonas mossii DSM
22836]
gi|332885864|gb|EGK06110.1| hypothetical protein HMPREF9456_02374 [Dysgonomonas mossii DSM
22836]
Length=129
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/99 (24%), Positives = 43/99 (44%), Gaps = 5/99 (5%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLY--ETDYGPVLDQGVPLIDGVAEVPAFDRTALVT 102
FP + +++ GV + W+ + Y + DY P ++ D+ ++
Sbjct 20 FPKYIQEIKQMGVVSFETWVKDSHTEYFGKDDYKT---SSKPQYSELSIADNVDKDKFIS 76
Query 103 ALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYF 141
L+ Q G+T + F G+ ++VV+L TC YF
Sbjct 77 CLKIHQQGKTDYYTFCTHCAETGIEKWVVNLNAMTCIYF 115
>gi|73661534|ref|YP_300315.1| hypothetical protein SSP0225 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494049|dbj|BAE17370.1| conserved hypothetical protein [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length=130
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/109 (27%), Positives = 49/109 (45%), Gaps = 9/109 (8%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLY-ETDYGPVLDQGVPLIDGVAEVPAFDRTALVTA 103
FP L + + G+ NT + ++ Y D + D+ V + VP +T L
Sbjct 20 FPKLFKAFKDMGIIVNTVNIEQGETSYIHQDGAEITDESVKV-----AVPIAQQTHLALV 74
Query 104 ---LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYM 149
L+ QAG+T F +F RAG+ ++ +D+ TC Y +Q +
Sbjct 75 KDILQRHQAGETDFPKFCDEMARAGIYKWYIDIIAGTCAYIDKENQVLI 123
>gi|282922832|ref|ZP_06330522.1| hypothetical protein SARG_00484 [Staphylococcus aureus subsp.
aureus C101]
gi|282315053|gb|EFB45439.1| hypothetical protein SARG_00484 [Staphylococcus aureus subsp.
aureus C101]
Length=129
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/55 (33%), Positives = 31/55 (57%), Gaps = 0/55 (0%)
Query 92 VPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
VP+ +++ + L Q GQT F F +AG+ ++ +D++ TCTY L +Q
Sbjct 66 VPSSNQSIVQDVLTRHQQGQTDFETFCDEMAQAGIYKWHIDIQAGTCTYIDLQEQ 120
>gi|256425308|ref|YP_003125961.1| phage envelope protein [Chitinophaga pinensis DSM 2588]
gi|256040216|gb|ACU63760.1| putative phage envelope protein [Chitinophaga pinensis DSM 2588]
Length=133
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/97 (27%), Positives = 43/97 (45%), Gaps = 1/97 (1%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTAL 104
FP + ++ G+R + + ++Y D + + +P+ D + AL +
Sbjct 20 FPRYVQEIKGMGLRRYEYLVQDGTTVYYGDDNHQV-ESIPIYDPQEINSSSSAAALRHTI 78
Query 105 RADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYF 141
Q GQT F F A AGV ++V+D E CTY
Sbjct 79 AIHQQGQTDFLTFCQQAANAGVEKWVIDTERMVCTYL 115
>gi|296158611|ref|ZP_06841441.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
gi|295891179|gb|EFG70967.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
Length=135
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/134 (27%), Positives = 56/134 (42%), Gaps = 3/134 (2%)
Query 21 MSAPITNL--QAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPV 78
MSA + +AA+ A + F + L AG+ + + Y G
Sbjct 1 MSAKLNEASRRAAENCAHQSHNGTIDFGSVVRALGEAGIESYFTDYRRGEHTYYAPGGET 60
Query 79 LDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTC 138
+PL D VA AFD A+ A+R Q+G + EF + AG + Y V + R
Sbjct 61 HVIALPLPD-VAIANAFDADAVTQAVRGAQSGAVKYAEFVSRTLAAGCVGYFVWITGRQV 119
Query 139 TYFGLHDQTYMEHY 152
YFG + ++E +
Sbjct 120 QYFGRRGEVHVERF 133
>gi|57652608|ref|YP_185311.1| hypothetical protein SACOL0419 [Staphylococcus aureus subsp.
aureus COL]
gi|87161135|ref|YP_493063.1| hypothetical protein SAUSA300_0349 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194130|ref|YP_498919.1| hypothetical protein SAOUHSC_00330 [Staphylococcus aureus subsp.
aureus NCTC 8325]
28 more sequence titles
Length=129
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/51 (36%), Positives = 27/51 (53%), Gaps = 0/51 (0%)
Query 96 DRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
++T + L Q GQT F F AG+ ++ +D++ TCTY L DQ
Sbjct 70 NKTIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLQDQ 120
>gi|253730711|ref|ZP_04864876.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253735090|ref|ZP_04869255.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|253725555|gb|EES94284.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253726890|gb|EES95619.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|329732377|gb|EGG68727.1| hypothetical protein SA21193_1889 [Staphylococcus aureus subsp.
aureus 21193]
gi|334270512|gb|EGL88912.1| hypothetical protein SA21305_1197 [Staphylococcus aureus subsp.
aureus 21305]
gi|341842694|gb|EGS83929.1| hypothetical protein SA21266_0434 [Staphylococcus aureus subsp.
aureus 21266]
gi|341848102|gb|EGS89269.1| hypothetical protein SA21259_2320 [Staphylococcus aureus subsp.
aureus 21259]
Length=129
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/51 (36%), Positives = 27/51 (53%), Gaps = 0/51 (0%)
Query 96 DRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
++T + L Q GQT F F AG+ ++ +D++ TCTY L DQ
Sbjct 70 NKTIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLQDQ 120
>gi|171464324|ref|YP_001798437.1| hypothetical protein Pnec_1769 [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193862|gb|ACB44823.1| conserved hypothetical protein [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length=132
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/63 (29%), Positives = 37/63 (59%), Gaps = 1/63 (1%)
Query 91 EVP-AFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYM 149
E+P AF++ +++A+R Q+ + + EF AG + Y+V + R +Y+G + ++
Sbjct 67 EMPNAFNKDGVISAIRGAQSDRLRYPEFLELTMSAGCIGYIVWIAGRHVSYYGRRGEVHV 126
Query 150 EHY 152
EH+
Sbjct 127 EHF 129
>gi|110640163|ref|YP_680373.1| hypothetical protein CHU_3798 [Cytophaga hutchinsonii ATCC 33406]
gi|110282844|gb|ABG61030.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length=129
Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/104 (29%), Positives = 45/104 (44%), Gaps = 15/104 (14%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYE-TDYGPVLDQGVPLIDGVAEVPAF------DR 97
FP + L G++ T ++ ++Y TD I A+ PAF D+
Sbjct 20 FPSYIQELIGLGLKQYTQFVSDGHTIYSGTDN--------VTIQSEAKYPAFTIAEKADK 71
Query 98 TALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYF 141
L L Q G T++ F A AGV ++VD+ N TC Y+
Sbjct 72 AKLKQDLGIHQQGGTNYMTFCEQAAAAGVETWIVDMHNMTCIYY 115
>gi|49482578|ref|YP_039802.1| hypothetical protein SAR0345 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424492|ref|ZP_05600921.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427161|ref|ZP_05603563.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 65-1322]
36 more sequence titles
Length=129
Score = 40.8 bits (94), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 30/54 (56%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F +AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTDFETFCDEMAQAGIYKWHIDIQAGTCTYIDLQEQ 120
>gi|82750059|ref|YP_415800.1| hypothetical protein SAB0298c [Staphylococcus aureus RF122]
gi|82655590|emb|CAI79986.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length=129
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 0/50 (0%)
Query 97 RTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
+T + L Q GQT F F AG+ ++ +D+++ TCTY L +Q
Sbjct 71 KTMVQNVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQSGTCTYIDLKEQ 120
>gi|283781878|ref|YP_003372633.1| hypothetical protein Psta_4123 [Pirellula staleyi DSM 6068]
gi|283440331|gb|ADB18773.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
Length=134
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/114 (32%), Positives = 49/114 (43%), Gaps = 17/114 (14%)
Query 45 FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVP--------AFD 96
FP + + L GV A S ET Y L G L V EVP F
Sbjct 23 FPQIVQQLISIGVE----RYHADYSRQETTY--YLTSGESL---VVEVPHEAQPTAMEFS 73
Query 97 RTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYME 150
+A+ A+R Q G+ S+R+F AG + Y V L R YFG ++++E
Sbjct 74 ASAVEQAVRQSQRGEHSYRDFVRKTQAAGCVGYFVQLTGRRVIYFGRCGESHVE 127
>gi|298693686|gb|ADI96908.1| hypothetical protein SAOV_0372c [Staphylococcus aureus subsp.
aureus ED133]
Length=129
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 29/54 (54%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|323438807|gb|EGA96545.1| hypothetical protein SAO11_2326 [Staphylococcus aureus O11]
Length=129
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 29/54 (54%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|258424599|ref|ZP_05687476.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257845194|gb|EEV69231.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341854486|gb|EGS95356.1| hypothetical protein SA21200_2310 [Staphylococcus aureus subsp.
aureus 21200]
Length=129
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 29/54 (54%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTDFETFCNEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|283469655|emb|CAQ48866.1| phage envelope protein [Staphylococcus aureus subsp. aureus ST398]
Length=129
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 29/54 (54%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|329847398|ref|ZP_08262426.1| hypothetical protein ABI_04620 [Asticcacaulis biprosthecum C19]
gi|328842461|gb|EGF92030.1| hypothetical protein ABI_04620 [Asticcacaulis biprosthecum C19]
Length=130
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 0/50 (0%)
Query 103 ALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHY 152
A+RA Q+G ++EF +AG + Y+V L R Y+G +T++E +
Sbjct 79 AVRASQSGAIKYKEFCLRILKAGCVAYLVSLAGRRAVYYGRTGETHIELF 128
>gi|341845840|gb|EGS87040.1| hypothetical protein SA21269_2205 [Staphylococcus aureus subsp.
aureus 21269]
Length=129
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 29/54 (54%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|282915670|ref|ZP_06323441.1| hypothetical protein SATG_02391 [Staphylococcus aureus subsp.
aureus D139]
gi|283768077|ref|ZP_06340992.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus H19]
gi|282320486|gb|EFB50825.1| hypothetical protein SATG_02391 [Staphylococcus aureus subsp.
aureus D139]
gi|283461956|gb|EFC09040.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus H19]
Length=129
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 29/54 (54%), Gaps = 0/54 (0%)
Query 93 PAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
P+ +++ + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 67 PSSNQSIVQDVLTRHQQGQTGFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|21282053|ref|NP_645141.1| hypothetical protein MW0324 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485228|ref|YP_042449.1| hypothetical protein SAS0324 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297209139|ref|ZP_06925538.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911140|ref|ZP_07128589.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|21203489|dbj|BAB94189.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49243671|emb|CAG42095.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296886072|gb|EFH25006.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887319|gb|EFK82515.1| bacteriophage envelope protein [Staphylococcus aureus subsp.
aureus TCH70]
Length=129
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/39 (42%), Positives = 22/39 (57%), Gaps = 0/39 (0%)
Query 108 QAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
Q GQT F F AG+ ++ +D++ TCTY L DQ
Sbjct 82 QQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLQDQ 120
>gi|302332085|gb|ADL22278.1| putative bacteriophage envelope protein [Staphylococcus aureus
subsp. aureus JKD6159]
Length=129
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (34%), Positives = 27/51 (53%), Gaps = 0/51 (0%)
Query 96 DRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
++T + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 70 NKTMVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
>gi|344176620|emb|CCC87079.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus LGA251]
Length=129
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
Query 97 RTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
+T + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 71 KTIVQDVLTRHQQGQTDFETFCNEMAEAGIYKWHIDIQAGTCTYINLKEQ 120
>gi|15923338|ref|NP_370872.1| hypothetical protein SAV0348 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926049|ref|NP_373582.1| hypothetical protein SA0336 [Staphylococcus aureus subsp. aureus
N315]
gi|148266835|ref|YP_001245778.1| hypothetical protein SaurJH9_0396 [Staphylococcus aureus subsp.
aureus JH9]
42 more sequence titles
Length=129
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (34%), Positives = 27/51 (53%), Gaps = 0/51 (0%)
Query 96 DRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146
++T + L Q GQT F F AG+ ++ +D++ TCTY L +Q
Sbjct 70 NKTIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQ 120
Lambda K H
0.320 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129330420882
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40