BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2013

Length=159
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841496|ref|NP_336533.1|  IS1607 transposase [Mycobacterium t...   318    2e-85
gi|294996949|ref|ZP_06802640.1|  transposase [Mycobacterium tuber...   315    2e-84
gi|57116936|ref|NP_216529.2|  transposase [Mycobacterium tubercul...   314    3e-84
gi|289447631|ref|ZP_06437375.1|  transposase [Mycobacterium tuber...   311    2e-83
gi|121637897|ref|YP_978120.1|  putative transposase [Mycobacteriu...   311    3e-83
gi|340627811|ref|YP_004746263.1|  transposase [Mycobacterium cane...   266    7e-70
gi|340627764|ref|YP_004746216.1|  putative transposase [Mycobacte...   265    1e-69
gi|302524775|ref|ZP_07277117.1|  transposase [Streptomyces sp. AA...   238    3e-61
gi|302526788|ref|ZP_07279130.1|  transposase [Streptomyces sp. AA...   235    1e-60
gi|308369591|ref|ZP_07418370.2|  transposase [Mycobacterium tuber...   230    5e-59
gi|308375750|ref|ZP_07444979.2|  transposase [Mycobacterium tuber...   229    7e-59
gi|296169592|ref|ZP_06851212.1|  IS111A/IS1328/IS1533 transposase...   229    9e-59
gi|308374464|ref|ZP_07436159.2|  transposase [Mycobacterium tuber...   228    2e-58
gi|258651436|ref|YP_003200592.1|  transposase IS111A/IS1328/IS153...   214    3e-54
gi|331696271|ref|YP_004332510.1|  transposase IS111A/IS1328/IS153...   196    1e-48
gi|119718869|ref|YP_925834.1|  transposase, IS111A/IS1328/IS1533 ...   182    2e-44
gi|289750595|ref|ZP_06509973.1|  transposase [Mycobacterium tuber...   177    6e-43
gi|331698109|ref|YP_004334348.1|  transposase IS111A/IS1328/IS153...   152    1e-35
gi|339294938|gb|AEJ47049.1|  transposase [Mycobacterium tuberculo...   120    5e-26
gi|13488058|ref|NP_085627.1|  transposase [Mesorhizobium loti MAF...   120    6e-26
gi|258653992|ref|YP_003203148.1|  transposase IS111A/IS1328/IS153...   113    1e-23
gi|258651756|ref|YP_003200912.1|  transposase IS111A/IS1328/IS153...   112    2e-23
gi|258651425|ref|YP_003200581.1|  transposase IS111A/IS1328/IS153...   107    5e-22
gi|258653017|ref|YP_003202173.1|  transposase IS111A/IS1328/IS153...   107    5e-22
gi|331699767|ref|YP_004336006.1|  transposase IS111A/IS1328/IS153...  97.4    6e-19
gi|331699591|ref|YP_004335830.1|  transposase IS111A/IS1328/IS153...  97.4    6e-19
gi|302529797|ref|ZP_07282139.1|  predicted protein [Streptomyces ...  93.6    8e-18
gi|300787959|ref|YP_003768250.1|  transposase [Amycolatopsis medi...  91.7    4e-17
gi|317121239|ref|YP_004101242.1|  transposase IS116/IS110/IS902 f...  84.7    5e-15
gi|331695007|ref|YP_004331246.1|  transposase IS111A/IS1328/IS153...  82.8    1e-14
gi|339628317|ref|YP_004719960.1|  transposase-like protein [Sulfo...  78.2    4e-13
gi|86739728|ref|YP_480128.1|  transposase IS116/IS110/IS902 [Fran...  77.4    7e-13
gi|86741926|ref|YP_482326.1|  transposase IS116/IS110/IS902 [Fran...  77.0    8e-13
gi|298252080|ref|ZP_06975883.1|  transposase IS111A/IS1328/IS1533...  76.3    1e-12
gi|298248808|ref|ZP_06972613.1|  transposase IS111A/IS1328/IS1533...  76.3    1e-12
gi|298241416|ref|ZP_06965223.1|  transposase IS111A/IS1328/IS1533...  76.3    1e-12
gi|288916586|ref|ZP_06410962.1|  transposase IS111A/IS1328/IS1533...  73.6    8e-12
gi|227821076|ref|YP_002825046.1|  putative transposase for insert...  72.8    2e-11
gi|271966087|ref|YP_003340283.1|  hypothetical protein Sros_4692 ...  72.4    2e-11
gi|227821132|ref|YP_002825102.1|  putative transposase for insert...  72.4    2e-11
gi|256397641|ref|YP_003119205.1|  transposase IS111A/IS1328/IS153...  72.4    2e-11
gi|227821834|ref|YP_002825804.1|  putative transposase for insert...  72.4    2e-11
gi|16519970|ref|NP_444090.1|  transposase of degenerate insertion...  71.6    4e-11
gi|227821408|ref|YP_002825378.1|  putative transposase for insert...  71.6    4e-11
gi|227822491|ref|YP_002826463.1|  putative transposase for insert...  71.6    4e-11
gi|227823668|ref|YP_002827641.1|  putative transposase for insert...  71.2    4e-11
gi|288924452|ref|ZP_06418431.1|  transposase IS111A/IS1328/IS1533...  70.9    6e-11
gi|145221789|ref|YP_001132467.1|  transposase, IS111A/IS1328/IS15...  70.5    8e-11
gi|298241889|ref|ZP_06965696.1|  transposase IS111A/IS1328/IS1533...  70.1    9e-11
gi|298250621|ref|ZP_06974425.1|  transposase IS111A/IS1328/IS1533...  70.1    9e-11


>gi|15841496|ref|NP_336533.1| IS1607 transposase [Mycobacterium tuberculosis CDC1551]
 gi|31793193|ref|NP_855686.1| transposase [Mycobacterium bovis AF2122/97]
 gi|148823228|ref|YP_001287982.1| transposase [Mycobacterium tuberculosis F11]
 25 more sequence titles
 
gi|253798934|ref|YP_003031935.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254364831|ref|ZP_04980877.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|254551036|ref|ZP_05141483.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289554206|ref|ZP_06443416.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289746039|ref|ZP_06505417.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|297634588|ref|ZP_06952368.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|297731576|ref|ZP_06960694.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|298525515|ref|ZP_07012924.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306972360|ref|ZP_07485021.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|307080069|ref|ZP_07489239.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|313658909|ref|ZP_07815789.1| transposase [Mycobacterium tuberculosis KZN V2475]
 gi|13881738|gb|AAK46347.1| IS1607, transposase [Mycobacterium tuberculosis CDC1551]
 gi|31618785|emb|CAD96889.1| POSSIBLE TRANSPOSASE [Mycobacterium bovis AF2122/97]
 gi|134150345|gb|EBA42390.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|148721755|gb|ABR06380.1| transposase [Mycobacterium tuberculosis F11]
 gi|253320437|gb|ACT25040.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|289438838|gb|EFD21331.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289686567|gb|EFD54055.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|298495309|gb|EFI30603.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308358236|gb|EFP47087.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308362167|gb|EFP51018.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|323719506|gb|EGB28633.1| transposase [Mycobacterium tuberculosis CDC1551A]
 gi|326903625|gb|EGE50558.1| transposase [Mycobacterium tuberculosis W-148]
 gi|328458689|gb|AEB04112.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|339298561|gb|AEJ50671.1| IS1607 transposase [Mycobacterium tuberculosis CCDC5180]
Length=206

 Score =  318 bits (815),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  48   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  107

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD
Sbjct  108  ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  167

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159
            CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sbjct  168  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  206


>gi|294996949|ref|ZP_06802640.1| transposase [Mycobacterium tuberculosis 210]
Length=206

 Score =  315 bits (806),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  48   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  107

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCRPRKDLVA RVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD
Sbjct  108  ATATLRRTCRPRKDLVATRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  167

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159
            CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sbjct  168  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  206


>gi|57116936|ref|NP_216529.2| transposase [Mycobacterium tuberculosis H37Rv]
 gi|148661827|ref|YP_001283350.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|167970457|ref|ZP_02552734.1| transposase [Mycobacterium tuberculosis H37Ra]
 19 more sequence titles
 
gi|254232184|ref|ZP_04925511.1| hypothetical protein TBCG_01966 [Mycobacterium tuberculosis C]
 gi|289443505|ref|ZP_06433249.1| transposase [Mycobacterium tuberculosis T46]
 gi|289570115|ref|ZP_06450342.1| transposase [Mycobacterium tuberculosis T17]
 gi|289574690|ref|ZP_06454917.1| transposase [Mycobacterium tuberculosis K85]
 gi|289754119|ref|ZP_06513497.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289758129|ref|ZP_06517507.1| transposase [Mycobacterium tuberculosis T85]
 gi|289762167|ref|ZP_06521545.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|339632050|ref|YP_004723692.1| transposase [Mycobacterium africanum GM041182]
 gi|38490301|emb|CAA98402.2| POSSIBLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]
 gi|124601243|gb|EAY60253.1| hypothetical protein TBCG_01966 [Mycobacterium tuberculosis C]
 gi|148505979|gb|ABQ73788.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|289416424|gb|EFD13664.1| transposase [Mycobacterium tuberculosis T46]
 gi|289539121|gb|EFD43699.1| transposase [Mycobacterium tuberculosis K85]
 gi|289543869|gb|EFD47517.1| transposase [Mycobacterium tuberculosis T17]
 gi|289694706|gb|EFD62135.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289709673|gb|EFD73689.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289713693|gb|EFD77705.1| transposase [Mycobacterium tuberculosis T85]
 gi|339331406|emb|CCC27095.1| putative transposase [Mycobacterium africanum GM041182]
 gi|344219836|gb|AEN00467.1| transposase [Mycobacterium tuberculosis CTRI-2]
Length=159

 Score =  314 bits (805),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +DTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  1    MDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD
Sbjct  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159
            CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sbjct  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159


>gi|289447631|ref|ZP_06437375.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289420589|gb|EFD17790.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=159

 Score =  311 bits (797),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 157/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +DTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  1    MDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCRPRKDLVAHRVALANQLRAH RVVFPGVVGLFADLDSPISLAFLTFLPRFD
Sbjct  61   ATATLRRTCRPRKDLVAHRVALANQLRAHRRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159
            CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sbjct  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159


>gi|121637897|ref|YP_978120.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224990391|ref|YP_002645078.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121493544|emb|CAL72018.1| Possible transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224773504|dbj|BAH26310.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341601934|emb|CCC64608.1| possible TRANSPOSASE [Mycobacterium bovis BCG str. Moreau RDJ]
Length=205

 Score =  311 bits (796),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 158/159 (99%), Gaps = 1/159 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  48   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  107

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPG VGLFADLDSPISLAFLTFLPRFD
Sbjct  108  ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPG-VGLFADLDSPISLAFLTFLPRFD  166

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  159
            CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sbjct  167  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR  205


>gi|340627811|ref|YP_004746263.1| transposase [Mycobacterium canettii CIPT 140010059]
 gi|340627948|ref|YP_004746400.1| transposase [Mycobacterium canettii CIPT 140010059]
 gi|340006001|emb|CCC45170.1| transposase [Mycobacterium canettii CIPT 140010059]
 gi|340006138|emb|CCC45310.1| transposase [Mycobacterium canettii CIPT 140010059]
Length=418

 Score =  266 bits (680),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 135/145 (94%), Positives = 138/145 (96%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAG+TVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDT 
Sbjct  77   VDTLLEAGLTVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTA  136

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCR RKDLV HRVALANQLRAHLR+VFPGVVGLFAD+DSPISLAFLT   RFD
Sbjct  137  ATATLRRTCRARKDLVGHRVALANQLRAHLRIVFPGVVGLFADIDSPISLAFLT---RFD  193

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
            CQDRADWLSVKRLA WLAAAGYCGR
Sbjct  194  CQDRADWLSVKRLAAWLAAAGYCGR  218


>gi|340627764|ref|YP_004746216.1| putative transposase [Mycobacterium canettii CIPT 140010059]
 gi|340005954|emb|CCC45121.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=355

 Score =  265 bits (678),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 135/145 (94%), Positives = 138/145 (96%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAG+TVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDT 
Sbjct  14   VDTLLEAGLTVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTA  73

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            ATATLRRTCR RKDLV HRVALANQLRAHLR+VFPGVVGLFAD+DSPISLAFLT   RFD
Sbjct  74   ATATLRRTCRARKDLVGHRVALANQLRAHLRIVFPGVVGLFADIDSPISLAFLT---RFD  130

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
            CQDRADWLSVKRLA WLAAAGYCGR
Sbjct  131  CQDRADWLSVKRLAAWLAAAGYCGR  155


>gi|302524775|ref|ZP_07277117.1| transposase [Streptomyces sp. AA4]
 gi|302433670|gb|EFL05486.1| transposase [Streptomyces sp. AA4]
Length=416

 Score =  238 bits (606),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 119/145 (83%), Positives = 126/145 (87%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +D LLEAG+TVVVISPNQ+KNLRGRYGSAGNKDDRFDAFVLADTLRTDR RLRPL PD  
Sbjct  76   IDALLEAGLTVVVISPNQVKNLRGRYGSAGNKDDRFDAFVLADTLRTDRVRLRPLTPDDE  135

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LRR CR RKDLVAHRV LANQLR HL+ VFPG VGLFAD+DSPISLAFLT   RFD
Sbjct  136  TTLALRRACRARKDLVAHRVGLANQLREHLKRVFPGAVGLFADIDSPISLAFLT---RFD  192

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
            CQDRADWLS +RLA WLA+AGYCGR
Sbjct  193  CQDRADWLSPRRLAAWLASAGYCGR  217


>gi|302526788|ref|ZP_07279130.1| transposase [Streptomyces sp. AA4]
 gi|302435683|gb|EFL07499.1| transposase [Streptomyces sp. AA4]
Length=416

 Score =  235 bits (600),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 118/145 (82%), Positives = 125/145 (87%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +D LLEAG+TVVVISPNQ+KNLRGRYGSAGNKDDRFDAFVLADTLRTDR RLRPL PD  
Sbjct  76   IDALLEAGLTVVVISPNQVKNLRGRYGSAGNKDDRFDAFVLADTLRTDRVRLRPLTPDDE  135

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LRR CR RKDLVAHRV LANQLR HL+ VFPG V LFAD+DSPISLAFLT   RFD
Sbjct  136  TTLALRRACRARKDLVAHRVGLANQLREHLKRVFPGAVALFADIDSPISLAFLT---RFD  192

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
            CQDRADWLS +RLA WLA+AGYCGR
Sbjct  193  CQDRADWLSPRRLAAWLASAGYCGR  217


>gi|308369591|ref|ZP_07418370.2| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308370888|ref|ZP_07423103.2| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308372117|ref|ZP_07427461.2| transposase [Mycobacterium tuberculosis SUMu004]
 9 more sequence titles
 
gi|308373299|ref|ZP_07431775.2| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308376887|ref|ZP_07440405.2| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308377890|ref|ZP_07480796.2| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308327072|gb|EFP15923.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308330513|gb|EFP19364.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308334348|gb|EFP23199.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308338149|gb|EFP27000.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308349630|gb|EFP38481.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308354260|gb|EFP43111.1| transposase [Mycobacterium tuberculosis SUMu009]
Length=387

 Score =  230 bits (587),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 117/117 (100%), Positives = 117/117 (100%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  48   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  107

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
            ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP
Sbjct  108  ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  164


>gi|308375750|ref|ZP_07444979.2| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308345329|gb|EFP34180.1| transposase [Mycobacterium tuberculosis SUMu007]
Length=408

 Score =  229 bits (585),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 117/117 (100%), Positives = 117/117 (100%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  69   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  128

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
            ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP
Sbjct  129  ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  185


>gi|296169592|ref|ZP_06851212.1| IS111A/IS1328/IS1533 transposase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895858|gb|EFG75553.1| IS111A/IS1328/IS1533 transposase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=414

 Score =  229 bits (585),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 119/154 (78%), Positives = 131/154 (86%), Gaps = 5/154 (3%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  LLEAGITVV+ISP+QL+NLRGRYGSAGNKDDRFDAFVLADTLRTDR+RLRPLLPD+P
Sbjct  76   VAALLEAGITVVIISPHQLQNLRGRYGSAGNKDDRFDAFVLADTLRTDRARLRPLLPDSP  135

Query  61   ATATLRRTCRPRKDLVAHRVALAN-QLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRF  119
            AT  LR+TCR RKDLVAHRVA+AN QLRAHL +VFPG VGLFA++DSPI LAFL    RF
Sbjct  136  ATVALRQTCRGRKDLVAHRVAVANHQLRAHLMIVFPGAVGLFAEIDSPIKLAFLN---RF  192

Query  120  DCQDRADWLSVKRLAGWLAAAGYCGRA-PRPAHR  152
            DCQ+RADWLSV R A WLA+  Y GR  PR  HR
Sbjct  193  DCQERADWLSVTRWANWLASVRYSGRTHPRELHR  226


>gi|308374464|ref|ZP_07436159.2| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308341841|gb|EFP30692.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=387

 Score =  228 bits (581),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 116/117 (99%), Positives = 116/117 (99%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  48   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  107

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
            ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLT LP
Sbjct  108  ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTLLP  164


>gi|258651436|ref|YP_003200592.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258651858|ref|YP_003201014.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258654115|ref|YP_003203271.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258654873|ref|YP_003204029.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258554661|gb|ACV77603.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258555083|gb|ACV78025.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258557340|gb|ACV80282.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258558098|gb|ACV81040.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
Length=416

 Score =  214 bits (545),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 109/145 (76%), Positives = 121/145 (84%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LL AG+TVVVISPNQ+KNLRGRYGSAGNKDDRFDA+VLADTLRTDRSRLRPL+PD P
Sbjct  76   VDALLGAGVTVVVISPNQVKNLRGRYGSAGNKDDRFDAYVLADTLRTDRSRLRPLVPDAP  135

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LRR  R R+DLVAHRVALANQLRAHLR+VFPG VGLF  +DS I+LAFLT   RF 
Sbjct  136  ETVALRRIVRARRDLVAHRVALANQLRAHLRLVFPGAVGLFRQIDSLITLAFLT---RFP  192

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
             QD+ADWL+  RL  WL++ GY GR
Sbjct  193  TQDKADWLTPTRLGRWLSSVGYSGR  217


>gi|331696271|ref|YP_004332510.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|331696745|ref|YP_004332984.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|331697696|ref|YP_004333935.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326950960|gb|AEA24657.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326951434|gb|AEA25131.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326952385|gb|AEA26082.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
Length=416

 Score =  196 bits (497),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 98/145 (68%), Positives = 115/145 (80%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD L +AG+ V VI P QLKNLR RYGSAGNKDDRFDA+VLADT+RTDR RLRPLL DTP
Sbjct  75   VDALRQAGLVVFVIPPGQLKNLRSRYGSAGNKDDRFDAYVLADTVRTDRRRLRPLLVDTP  134

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LR++ R R+DLVAHRVA+ANQLRAHL++  P V+GLF+D+DS ISL FL    RF 
Sbjct  135  TTTALRQSVRARRDLVAHRVAVANQLRAHLQICLPAVIGLFSDIDSQISLRFLE---RFT  191

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
             Q + DWL+ +RLA WLA+ GYCGR
Sbjct  192  TQTQIDWLTPRRLASWLASVGYCGR  216


>gi|119718869|ref|YP_925834.1| transposase, IS111A/IS1328/IS1533 [Nocardioides sp. JS614]
 gi|119539530|gb|ABL84147.1| transposase, IS111A/IS1328/IS1533 [Nocardioides sp. JS614]
Length=500

 Score =  182 bits (461),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 94/145 (65%), Positives = 109/145 (76%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LL A +TV+VI+P Q+KNLR RYGSAGNKDDRFDA+VLAD +RTDR RL PL   TP
Sbjct  72   VDALLAAELTVLVIAPAQVKNLRSRYGSAGNKDDRFDAYVLADVVRTDRRRLTPLTRSTP  131

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            A   +R + R R+DLV HRVA AN LRAHL+VVFPG+V LFA LDS +S   L+FL RF 
Sbjct  132  AAQAMRSSVRARRDLVEHRVAAANPLRAHLQVVFPGIVDLFAALDSAVS---LSFLERFP  188

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
             Q +ADWL+V RLA WLA   Y GR
Sbjct  189  TQAKADWLTVDRLAAWLAKVAYSGR  213


>gi|289750595|ref|ZP_06509973.1| transposase [Mycobacterium tuberculosis T92]
 gi|289691182|gb|EFD58611.1| transposase [Mycobacterium tuberculosis T92]
Length=158

 Score =  177 bits (448),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  69   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  128

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHL  90
            ATATLRRTCRPRKDLVAHRVALANQLRAHL
Sbjct  129  ATATLRRTCRPRKDLVAHRVALANQLRAHL  158


>gi|331698109|ref|YP_004334348.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326952798|gb|AEA26495.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
Length=448

 Score =  152 bits (384),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 88/156 (57%), Positives = 99/156 (64%), Gaps = 7/156 (4%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  LLEAG+TV +I P  +  LR RY +  NKDDRFDA++LAD LRTDR RL PL  DT 
Sbjct  82   VAALLEAGLTVFLIVPQHVTALRSRYTTTRNKDDRFDAYLLADVLRTDRRRLTPLTVDTD  141

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            AT  LR   R R DL+  RVA  NQLRAHL++  PG VGLF +LD  ISLAFLT   RF 
Sbjct  142  ATVGLRMLIRTRADLIKARVAAHNQLRAHLQLAHPGTVGLFCELDGKISLAFLT---RFP  198

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPAR  156
                A WLS KRLA WL AA Y     RP  R P +
Sbjct  199  TPRHARWLSEKRLAAWLKAAHYT----RPTTRTPGQ  230


>gi|339294938|gb|AEJ47049.1| transposase [Mycobacterium tuberculosis CCDC5079]
Length=149

 Score =  120 bits (302),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 60/61 (99%), Positives = 60/61 (99%), Gaps = 0/61 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP
Sbjct  48   VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  107

Query  61   A  61
             
Sbjct  108  G  108


>gi|13488058|ref|NP_085627.1| transposase [Mesorhizobium loti MAFF303099]
 gi|14027876|dbj|BAB54468.1| transposase [Mesorhizobium loti MAFF303099]
Length=400

 Score =  120 bits (301),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 73/145 (51%), Positives = 90/145 (63%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VDTL+EAG  V+ + PN +K  R RY +AG K D  +AF+LAD LRTD  R RPL+P + 
Sbjct  65   VDTLVEAGYPVIPVHPNVVKACRPRYHAAGGKSDPGNAFMLADILRTDGHRFRPLVPVSD  124

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
                LR   R R DLVA RVALANQLR  L   +PG V +FA +DSPI+LAF+    R+ 
Sbjct  125  DFLALRALVRGRDDLVAQRVALANQLRNLLEGFWPGAVAIFAAIDSPIALAFVG---RYP  181

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
              D A  L  KRLA ++A     GR
Sbjct  182  TPDSASRLGEKRLASFMAQHADRGR  206


>gi|258653992|ref|YP_003203148.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258655331|ref|YP_003204487.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258655385|ref|YP_003204541.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258557217|gb|ACV80159.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258558556|gb|ACV81498.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258558610|gb|ACV81552.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
Length=412

 Score =  113 bits (282),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 69/145 (48%), Positives = 83/145 (58%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LLEAG  VV +SPN +K  R     +G K D  DA V+A+ LR    RLRP  P TP
Sbjct  72   VDALLEAGYPVVPVSPNAIKTWRDGEVLSGAKSDAGDAAVIAEYLRLRSHRLRPATPFTP  131

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            AT  LR   R R D+VA R A ANQL A L   +PG   +FAD++SPI+L FLT   R+ 
Sbjct  132  ATRALRTVVRTRDDIVAMRTATANQLTALLDAHWPGATKVFADIESPIALEFLT---RYP  188

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
                A  L  KR+A +    GY GR
Sbjct  189  TAKHAAGLGEKRMAAFCVKHGYSGR  213


>gi|258651756|ref|YP_003200912.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258554981|gb|ACV77923.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
Length=412

 Score =  112 bits (279),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 69/145 (48%), Positives = 83/145 (58%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LLEAG  VV +SPN +K  R     +G K D  DA V+A+ LR    RLRP  P TP
Sbjct  72   VDALLEAGNPVVPVSPNAIKTWRDGEVLSGAKSDAGDAAVIAEYLRLRSHRLRPATPFTP  131

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            AT  LR   R R D+VA R A ANQL A L   +PG   +FAD++SPI+L FLT   R+ 
Sbjct  132  ATRALRTVVRTRDDIVAMRTATANQLTALLDAHWPGATKVFADIESPIALEFLT---RYP  188

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
                A  L  KR+A +    GY GR
Sbjct  189  TAKHAAGLGEKRMAAFCVKHGYSGR  213


>gi|258651425|ref|YP_003200581.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258554650|gb|ACV77592.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
Length=412

 Score =  107 bits (268),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 66/145 (46%), Positives = 81/145 (56%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LLEAG  VV +SPN +K  R     +G K D  DA V+A+ LR    RLRP  P T 
Sbjct  72   VDALLEAGYPVVPVSPNAIKTWRDGEVLSGAKSDAGDAAVIAEYLRLRSHRLRPATPFTA  131

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  +R   R R D+VA R A ANQL A L   +PG   +FAD++SPI+L FLT   R+ 
Sbjct  132  QTKAVRTVVRTRDDIVAMRTATANQLTALLDAHWPGATKVFADIESPIALEFLT---RYP  188

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
                A  L  KR+A +    GY GR
Sbjct  189  TAKHAAGLGEKRMAAFCVKHGYSGR  213


>gi|258653017|ref|YP_003202173.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
 gi|258556242|gb|ACV79184.1| transposase IS111A/IS1328/IS1533 [Nakamurella multipartita DSM 
44233]
Length=412

 Score =  107 bits (268),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 66/147 (45%), Positives = 81/147 (56%), Gaps = 3/147 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LLEAG  VV +SPN +K  R     +G K D  DA V+A+ LR    RLRP  P T 
Sbjct  72   VDALLEAGYPVVPVSPNAIKTWRDGEVLSGAKSDAGDAAVIAEYLRLRSHRLRPATPFTA  131

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  +R   R R D+VA R A  NQL A L   +PG   +FAD++SPI+L FLT   R+ 
Sbjct  132  QTKAVRTVVRTRDDIVAMRTAATNQLTALLDAHWPGATKVFADIESPIALEFLT---RYP  188

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAP  147
                A  L  KR+A +    GY GR P
Sbjct  189  TAKHAAGLGEKRMAAFCVKHGYSGRRP  215


>gi|331699767|ref|YP_004336006.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|331699895|ref|YP_004336134.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326954456|gb|AEA28153.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326954584|gb|AEA28281.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
Length=410

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 64/145 (45%), Positives = 77/145 (54%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LL AG  VV + PN +K  R     +G K D  DA V+A+ LR    RLR   P + 
Sbjct  71   VDALLAAGYPVVAVKPNAIKTWREGEVISGAKSDPGDAHVIAEYLRLRAHRLRAATPLSE  130

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LR   R R DLVA RVA  NQL A L   +PG   +FA++ S ISLAFL    R+ 
Sbjct  131  DTRALRLVSRTRSDLVAARVAAGNQLAALLDTAWPGAKEIFAEVTSAISLAFLH---RYP  187

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
              D A  L  KR+A +    GY GR
Sbjct  188  TPDHAAHLGEKRMAAFCIKHGYSGR  212


>gi|331699591|ref|YP_004335830.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326954280|gb|AEA27977.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
Length=410

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 64/145 (45%), Positives = 77/145 (54%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LL AG  VV + PN +K  R     +G K D  DA V+A+ LR    RLR   P + 
Sbjct  71   VDALLAAGYPVVAVKPNAIKTWREGEVISGAKSDPGDAHVIAEYLRLRAHRLRAATPLSE  130

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LR   R R DLVA RVA  NQL A L   +PG   +FA++ S ISLAFL    R+ 
Sbjct  131  DTRALRLVSRTRSDLVAARVAAGNQLAALLDTAWPGAKEIFAEVTSAISLAFLH---RYP  187

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
              D A  L  KR+A +    GY GR
Sbjct  188  TPDHAAHLGEKRMAAFCIKHGYSGR  212


>gi|302529797|ref|ZP_07282139.1| predicted protein [Streptomyces sp. AA4]
 gi|302438692|gb|EFL10508.1| predicted protein [Streptomyces sp. AA4]
Length=399

 Score = 93.6 bits (231),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 63/147 (43%), Positives = 79/147 (54%), Gaps = 3/147 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LL AG  V+ I PN    +R R+G+A  K D  D+F LAD LRTD  +LR L P   
Sbjct  64   VDRLLTAGHPVIPIHPNAFNAVRPRWGAARAKSDPGDSFKLADYLRTDGHQLRTLSPTLA  123

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  L+   R R D V  RVA  NQL A L   +PG   +FA LDS I+   L+FL R+ 
Sbjct  124  ETLELQALTRQRADHVEARVAAVNQLAALLDEHWPGGKAVFASLDSDIA---LSFLDRYP  180

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAP  147
              + A  L+  RL  +    GY G+ P
Sbjct  181  TPESAATLTAGRLEAFCKRHGYSGKRP  207


>gi|300787959|ref|YP_003768250.1| transposase [Amycolatopsis mediterranei U32]
 gi|299797473|gb|ADJ47848.1| transposase [Amycolatopsis mediterranei U32]
 gi|340529534|gb|AEK44739.1| transposase [Amycolatopsis mediterranei S699]
Length=413

 Score = 91.7 bits (226),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 63/145 (44%), Positives = 81/145 (56%), Gaps = 3/145 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD LLEAG  VV + PN +K  R     +G K D  DA ++A+ LR  + +LRP  P +P
Sbjct  73   VDALLEAGFPVVPVKPNAIKAWREAEVLSGAKSDTADAAIIAEYLRLRQHKLRPATPYSP  132

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
             T  LR   R R DLV  RVA ANQL A L   +PG   +FAD++SPI+L FLT   R+ 
Sbjct  133  QTTALRTVVRTRDDLVTARVAAANQLAALLDTHWPGAKAVFADVESPIALEFLT---RYP  189

Query  121  CQDRADWLSVKRLAGWLAAAGYCGR  145
                A  +   R+A +    GY GR
Sbjct  190  TAASATSIGPVRMAAFCVKHGYSGR  214


>gi|317121239|ref|YP_004101242.1| transposase IS116/IS110/IS902 family protein [Thermaerobacter 
marianensis DSM 12885]
 gi|317122365|ref|YP_004102368.1| transposase IS116/IS110/IS902 family protein [Thermaerobacter 
marianensis DSM 12885]
 gi|315591219|gb|ADU50515.1| transposase IS116/IS110/IS902 family protein [Thermaerobacter 
marianensis DSM 12885]
 gi|315592345|gb|ADU51641.1| transposase IS116/IS110/IS902 family protein [Thermaerobacter 
marianensis DSM 12885]
Length=406

 Score = 84.7 bits (208),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 50/117 (43%), Positives = 63/117 (54%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  LL  G  V  ++P  +   R R   AG+KDDR DA VLA+ LRTDR RL+PL  ++ 
Sbjct  66   VAALLATGFQVYPVNPKAVDRYRDRLSPAGSKDDRRDALVLAEILRTDRHRLQPLRLESD  125

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                LR      + LV  R  L NQL A LR  +P  + LFADL  P++  FL   P
Sbjct  126  TLRQLRVVYSHHQTLVEERTRLLNQLIACLRTYYPRALELFADLGRPVAWTFLRTFP  182


>gi|331695007|ref|YP_004331246.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|331699800|ref|YP_004336039.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326949696|gb|AEA23393.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326954489|gb|AEA28186.1| transposase IS111A/IS1328/IS1533 [Pseudonocardia dioxanivorans 
CB1190]
Length=410

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 56/147 (39%), Positives = 72/147 (49%), Gaps = 3/147 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+ L   G TV  +SP      R RY  A  KDDRFDAFVLADTLR +    R L P +P
Sbjct  73   VEHLQARGHTVFPVSPRIAARARERYRVAAVKDDRFDAFVLADTLRHEHPHWRALTPPSP  132

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
              A ++   R R  L   + A  +QLRA L    P    LF+ +D  I+L F+   P   
Sbjct  133  LLAEIKALTRDRDRLQQTQQATESQLRAILEAYHPAPARLFSSVDRQITLHFVLDYPTPA  192

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAP  147
               R   +   R+ G+L+   Y GR P
Sbjct  193  AASR---IKTTRMNGFLSRHRYTGRVP  216


>gi|339628317|ref|YP_004719960.1| transposase-like protein [Sulfobacillus acidophilus TPY]
 gi|339286106|gb|AEJ40217.1| transposase-like protein [Sulfobacillus acidophilus TPY]
Length=401

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 59/154 (39%), Positives = 75/154 (49%), Gaps = 10/154 (6%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            VD L+  G  V  ++P   K    R   +G K DR DA +LA    TDR +LRPL P   
Sbjct  68   VDWLITTGFWVYPVNP---KVSDARRKPSGAKTDRLDAAILARLGWTDRDQLRPLRPADE  124

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
            A   LR+  R  + L      L NQL A L+  +P V+  FAD+  P++LAFL   P  D
Sbjct  125  AWVELRQLTRIDEALTRQATRLTNQLLAALKSYYPQVLAAFADMSRPVALAFLANWP--D  182

Query  121  CQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCP  154
             QD A  L+V  +  WL    Y    PR A   P
Sbjct  183  PQD-ARRLTVNEVMSWLRQHRY----PRAAQEAP  211


>gi|86739728|ref|YP_480128.1| transposase IS116/IS110/IS902 [Frankia sp. CcI3]
 gi|86566590|gb|ABD10399.1| transposase IS116/IS110/IS902 [Frankia sp. CcI3]
Length=407

 Score = 77.4 bits (189),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 42/117 (36%), Positives = 62/117 (53%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  L+ AG  V+ ++P Q    R RY ++G K D  DA  LAD +RTDR +LRP+  D+ 
Sbjct  69   VRALVAAGYQVIAVNPLQAARYRERYSTSGAKSDAGDAHSLADMVRTDRHQLRPVAGDSD  128

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                ++   R  ++L+  R     +LR+ L   FP  +  F DLD+P +L  L   P
Sbjct  129  TAEAVKIVARAHQNLIWDRTRQTQRLRSALLEFFPAALAAFDDLDTPDALELLAKAP  185


>gi|86741926|ref|YP_482326.1| transposase IS116/IS110/IS902 [Frankia sp. CcI3]
 gi|86742892|ref|YP_483292.1| transposase IS116/IS110/IS902 [Frankia sp. CcI3]
 gi|86568788|gb|ABD12597.1| transposase IS116/IS110/IS902 [Frankia sp. CcI3]
 gi|86569754|gb|ABD13563.1| transposase IS116/IS110/IS902 [Frankia sp. CcI3]
Length=424

 Score = 77.0 bits (188),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 42/117 (36%), Positives = 62/117 (53%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  L+ AG  V+ ++P Q    R RY ++G K D  DA  LAD +RTDR +LRP+  D+ 
Sbjct  86   VRALVAAGYQVIAVNPLQAARYRERYSTSGAKSDAGDAHSLADMVRTDRHQLRPVAGDSD  145

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                ++   R  ++L+  R     +LR+ L   FP  +  F DLD+P +L  L   P
Sbjct  146  TAEAVKIVARAHQNLIWDRTRQTQRLRSALLEFFPAALAAFDDLDTPDALELLAKAP  202


>gi|298252080|ref|ZP_06975883.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
 gi|297546672|gb|EFH80540.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
Length=404

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 47/117 (41%), Positives = 63/117 (54%), Gaps = 3/117 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +  LLEAGI V  ++P     LR    +AG K DR DA++LA T R D + LR L PD+P
Sbjct  66   ITFLLEAGIPVYPVNPKTANQLRK---TAGAKTDRIDAYLLAKTGRFDLADLRRLSPDSP  122

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
              A L+   R +  L+  +  L NQL A L+  +P  + LF  L  P +L FL   P
Sbjct  123  IIAELKTLTRDQDALIQSQTRLVNQLTACLKEYYPVGLKLFGKLHQPSTLLFLQAYP  179


>gi|298248808|ref|ZP_06972613.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
 gi|297551467|gb|EFH85333.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
Length=404

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 47/117 (41%), Positives = 63/117 (54%), Gaps = 3/117 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +  LLEAGI V  ++P     LR    +AG K DR DA++LA T R D + LR L PD+P
Sbjct  66   ITFLLEAGIPVYPVNPKTANQLRK---TAGAKTDRIDAYLLAKTGRFDLADLRRLSPDSP  122

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
              A L+   R +  L+  +  L NQL A L+  +P  + LF  L  P +L FL   P
Sbjct  123  IIAELKTLTRDQDALIQSQTRLVNQLTACLKEYYPVGLKLFGKLHQPSTLLFLQAYP  179


>gi|298241416|ref|ZP_06965223.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
 gi|297554470|gb|EFH88334.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
Length=404

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 47/117 (41%), Positives = 63/117 (54%), Gaps = 3/117 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +  LLEAGI V  ++P     LR    +AG K DR DA++LA T R D + LR L PD+P
Sbjct  66   ITFLLEAGIPVYPVNPKTANQLRK---TAGAKTDRIDAYLLAKTGRFDLADLRRLSPDSP  122

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
              A L+   R +  L+  +  L NQL A L+  +P  + LF  L  P +L FL   P
Sbjct  123  IIAELKTLTRDQDALIQSQTRLVNQLTACLKEYYPVGLKLFGKLHQPSTLLFLQAYP  179


>gi|288916586|ref|ZP_06410962.1| transposase IS111A/IS1328/IS1533 [Frankia sp. EUN1f]
 gi|288352017|gb|EFC86218.1| transposase IS111A/IS1328/IS1533 [Frankia sp. EUN1f]
Length=407

 Score = 73.6 bits (179),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 44/117 (38%), Positives = 59/117 (51%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  L+ AG TV  I+P Q    R R+  +G K D  DA +LAD +RTD  +LRP+  DT 
Sbjct  71   VAALVAAGYTVFAINPLQASRFRARHAVSGAKSDAADAHMLADMVRTDAHQLRPVAGDTA  130

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                ++   R  K L+  R     +LR  LR  FP  +  F DLD+  +L  L   P
Sbjct  131  TAEAVKVVTRTHKTLIWERTRHTQRLRHALRDYFPAALVAFDDLDAADTLELLAKAP  187


>gi|227821076|ref|YP_002825046.1| putative transposase for insertion sequence NGRIS-13j [Sinorhizobium 
fredii NGR234]
 gi|227340075|gb|ACP24293.1| putative transposase for insertion sequence NGRIS-13j [Sinorhizobium 
fredii NGR234]
Length=459

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 46/117 (40%), Positives = 59/117 (51%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTDR   R L    P
Sbjct  116  VETLIERGCQVHAINPKQMDRFRDRFTLAGAKDDSRDAEVMASALRTDRRCFRLLAAADP  175

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                LR   R  +DL A R  L N++R  L   FP ++ L  DL +   L     +P
Sbjct  176  VVIELREWSRMAEDLGAERNRLTNRMREQLWRYFPALLELENDLGAEWLLDLWEAVP  232


>gi|271966087|ref|YP_003340283.1| hypothetical protein Sros_4692 [Streptosporangium roseum DSM 
43021]
 gi|270509262|gb|ACZ87540.1| hypothetical protein Sros_4692 [Streptosporangium roseum DSM 
43021]
Length=409

 Score = 72.4 bits (176),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 43/117 (37%), Positives = 59/117 (51%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  LL AG TV+ ++P Q    R R   +G K D  DA +LAD +RTD  +LRP+  D+ 
Sbjct  72   VQALLAAGYTVLAVNPLQAARYRERLSVSGAKSDAADAHMLADMVRTDSHQLRPVAGDSA  131

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                ++   R  K L+  R   A +LR  LR  FP  +  F DL +  +L  L   P
Sbjct  132  EAEAIKVVTRAHKTLIWERARHAQRLRHALRDYFPAALEAFEDLAATDTLELLAKAP  188


>gi|227821132|ref|YP_002825102.1| putative transposase for insertion sequence NGRIS-13i [Sinorhizobium 
fredii NGR234]
 gi|227823469|ref|YP_002827442.1| putative transposase for insertion sequence NGRIS-13d [Sinorhizobium 
fredii NGR234]
 gi|227340131|gb|ACP24349.1| putative transposase for insertion sequence NGRIS-13i [Sinorhizobium 
fredii NGR234]
 gi|227342471|gb|ACP26689.1| putative transposase for insertion sequence NGRIS-13d [Sinorhizobium 
fredii NGR234]
Length=416

 Score = 72.4 bits (176),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 46/117 (40%), Positives = 59/117 (51%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTDR   R L    P
Sbjct  73   VETLIERGCQVHAINPKQMDRFRDRFTLAGAKDDSRDAEVMASALRTDRRCFRLLAAADP  132

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                LR   R  +DL A R  L N++R  L   FP ++ L  DL +   L     +P
Sbjct  133  VVIELREWSRMAEDLGAERNRLTNRMREQLWRYFPALLELENDLGAEWLLDLWEAVP  189


>gi|256397641|ref|YP_003119205.1| transposase IS111A/IS1328/IS1533 [Catenulispora acidiphila DSM 
44928]
 gi|256363867|gb|ACU77364.1| transposase IS111A/IS1328/IS1533 [Catenulispora acidiphila DSM 
44928]
Length=408

 Score = 72.4 bits (176),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 43/117 (37%), Positives = 59/117 (51%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  L+ AG TV+ ++P      R R   +G K D  DA +LAD +RTD  +LRP+  D+ 
Sbjct  71   VGALIAAGYTVLAVNPLVAARYRERRAVSGAKSDAGDAHMLADMVRTDGHQLRPVAGDSD  130

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                ++   R  K L+  R     +LR  LR  FP  +  F DLD+P SL  L   P
Sbjct  131  LAEAIKVVTRAHKTLIWERTRHTQRLRHVLRDYFPAALAAFEDLDAPESLELLAKAP  187


>gi|227821834|ref|YP_002825804.1| putative transposase for insertion sequence NGRIS-13g [Sinorhizobium 
fredii NGR234]
 gi|227823660|ref|YP_002827633.1| putative transposase for insertion sequence NGRIS-13c [Sinorhizobium 
fredii NGR234]
 gi|227823962|ref|YP_002827935.1| putative transpose for insertion sequence NGRIS-13a [Sinorhizobium 
fredii NGR234]
 gi|227340833|gb|ACP25051.1| putative transposase for insertion sequence NGRIS-13g [Sinorhizobium 
fredii NGR234]
 gi|227342662|gb|ACP26880.1| putative transposase for insertion sequence NGRIS-13c [Sinorhizobium 
fredii NGR234]
 gi|227342964|gb|ACP27182.1| putative transpose for insertion sequence NGRIS-13a [Sinorhizobium 
fredii NGR234]
Length=416

 Score = 72.4 bits (176),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 46/117 (40%), Positives = 59/117 (51%), Gaps = 0/117 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTDR   R L    P
Sbjct  73   VETLIERGCQVHAINPKQMDRFRDRFTLAGAKDDSRDAEVMASALRTDRRCFRLLAAADP  132

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLP  117
                LR   R  +DL A R  L N++R  L   FP ++ L  DL +   L     +P
Sbjct  133  VVIELREWSRMAEDLGAERNRLTNRMREQLWRYFPALLELENDLGAEWLLDLWEAVP  189


>gi|16519970|ref|NP_444090.1| transposase of degenerate insertion sequence NGRIS-13l [Sinorhizobium 
fredii NGR234]
 gi|2497403|sp|Q53198.1|Y4UE_RHISN RecName: Full=Putative transposase y4uE
 gi|1486427|emb|CAA92405.1| transposase homologue [Rhizobium sp.]
 gi|2182655|gb|AAB91877.1| putative transposase of degenerate insertion sequence NGRIS-13l 
[Sinorhizobium fredii NGR234]
Length=359

 Score = 71.6 bits (174),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 48/133 (37%), Positives = 64/133 (49%), Gaps = 0/133 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTD    R L    P
Sbjct  148  VETLIERGFKVNAINPKQMDRFRDRFTMAGAKDDSRDAEVMASALRTDPRCFRLLAVSDP  207

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
                LR   R  +DL A R  L N++R  L   FP ++ L  DL +   L     +P  D
Sbjct  208  VVIELREWSRIAEDLSAERNRLTNRMREQLWRYFPALLELENDLGAEWLLDLWDTVPTPD  267

Query  121  CQDRADWLSVKRL  133
               R    ++ +L
Sbjct  268  KAARIREATIAKL  280


>gi|227821408|ref|YP_002825378.1| putative transposase for insertion sequence NGRIS-13h [Sinorhizobium 
fredii NGR234]
 gi|227340407|gb|ACP24625.1| putative transposase for insertion sequence NGRIS-13h [Sinorhizobium 
fredii NGR234]
Length=459

 Score = 71.6 bits (174),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 44/106 (42%), Positives = 56/106 (53%), Gaps = 0/106 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTDR   R L    P
Sbjct  116  VETLIERGCQVHAINPKQMDRFRDRFTLAGAKDDSRDAEVMASALRTDRRCFRLLAAADP  175

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDS  106
                LR   R  +DL A R  L N++R  L   FP ++ L  DL +
Sbjct  176  VVIELREWSRMAEDLGAERNRLTNRMREQLWRYFPALLELENDLGA  221


>gi|227822491|ref|YP_002826463.1| putative transposase for insertion sequence NGRIS-13f [Sinorhizobium 
fredii NGR234]
 gi|227341492|gb|ACP25710.1| putative transposase for insertion sequence NGRIS-13f [Sinorhizobium 
fredii NGR234]
Length=416

 Score = 71.6 bits (174),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 44/104 (43%), Positives = 55/104 (53%), Gaps = 0/104 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTDR   R L    P
Sbjct  73   VETLIERGCQVHAINPKQMDRFRDRFTLAGAKDDSRDAEVMASALRTDRRCFRLLAAADP  132

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADL  104
                LR   R  +DL A R  L N++R  L   FP ++ L  DL
Sbjct  133  VVIELREWSRMAEDLGAERNRLTNRMREQLWRYFPALLELENDL  176


>gi|227823668|ref|YP_002827641.1| putative transposase for insertion sequence NGRIS-13b [Sinorhizobium 
fredii NGR234]
 gi|227342670|gb|ACP26888.1| putative transposase for insertion sequence NGRIS-13b [Sinorhizobium 
fredii NGR234]
Length=416

 Score = 71.2 bits (173),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 44/104 (43%), Positives = 55/104 (53%), Gaps = 0/104 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+TL+E G  V  I+P Q+   R R+  AG KDD  DA V+A  LRTDR   R L    P
Sbjct  73   VETLIERGCQVHAINPKQMDRFRDRFTLAGAKDDSRDAEVMASALRTDRRCFRLLAAADP  132

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADL  104
                LR   R  +DL A R  L N++R  L   FP ++ L  DL
Sbjct  133  VVIELREWSRMAEDLGAERNRLTNRMREQLWRYFPALLELENDL  176


>gi|288924452|ref|ZP_06418431.1| transposase IS111A/IS1328/IS1533 [Frankia sp. EUN1f]
 gi|288344201|gb|EFC78751.1| transposase IS111A/IS1328/IS1533 [Frankia sp. EUN1f]
Length=407

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 41/113 (37%), Positives = 59/113 (53%), Gaps = 0/113 (0%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V  L+ AG  V+ ++P Q    R RY ++G K D  DA  LAD +RTDR +LR +  D+ 
Sbjct  69   VSALVAAGYQVIAVNPLQAARYRERYSTSGAKSDAGDAHALADMVRTDRHQLRQVAGDSD  128

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFL  113
                ++   R  + LV  R     +LR+ L   FP  +  F DLD+P +L  L
Sbjct  129  LADAVKVVARAHQSLVWDRTRQVQRLRSALLESFPAALVAFDDLDAPDTLELL  181


>gi|145221789|ref|YP_001132467.1| transposase, IS111A/IS1328/IS1533 [Mycobacterium gilvum PYR-GCK]
 gi|315442173|ref|YP_004075052.1| transposase IS116/IS110/IS902 family [Mycobacterium sp. Spyr1]
 gi|315443792|ref|YP_004076671.1| transposase IS116/IS110/IS902 family [Mycobacterium sp. Spyr1]
 gi|315446473|ref|YP_004079352.1| transposase IS116/IS110/IS902 family [Mycobacterium sp. Spyr1]
 gi|145214275|gb|ABP43679.1| transposase, IS111A/IS1328/IS1533 [Mycobacterium gilvum PYR-GCK]
 gi|315260476|gb|ADT97217.1| transposase IS116/IS110/IS902 family [Mycobacterium sp. Spyr1]
 gi|315262095|gb|ADT98836.1| transposase IS116/IS110/IS902 family [Mycobacterium sp. Spyr1]
 gi|315264776|gb|ADU01518.1| transposase IS116/IS110/IS902 family [Mycobacterium sp. Spyr1]
Length=406

 Score = 70.5 bits (171),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 49/141 (35%), Positives = 69/141 (49%), Gaps = 3/141 (2%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            V+ L  AG  V  ++P  +   R R+  +G K D  DA +LAD +RTDR   RP+  DTP
Sbjct  67   VEALAAAGYEVFAVNPLAVARYRDRHQVSGAKSDAADAKLLADLVRTDRHNHRPIAGDTP  126

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
                ++   R  ++L+  R    N LR+ LR  +P  +  FA L    +LA L   P   
Sbjct  127  EVEAIKVLARAHQNLIWSRNRNTNALRSALREYYPAALEAFASLSDRDALAILGRAP---  183

Query  121  CQDRADWLSVKRLAGWLAAAG  141
                A  LSV ++   L AAG
Sbjct  184  TPTDAARLSVSKIRSALKAAG  204


>gi|298241889|ref|ZP_06965696.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
 gi|297554943|gb|EFH88807.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
Length=404

 Score = 70.1 bits (170),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 46/142 (33%), Positives = 72/142 (51%), Gaps = 6/142 (4%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +  LLEAG  V  ++P   K +  +  ++G K D+ DA++LA   R++ + LR L PD+P
Sbjct  68   ITHLLEAGFAVYPVNP---KTVDRKRSASGAKTDQIDAYLLAKHGRSEIADLRRLEPDSP  124

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
              A L+   R +  L+  +  L NQL A L+  +P  + LF  +  P +L FL   P   
Sbjct  125  LIAELKALTRDQDGLIQMQTRLVNQLTACLKAYYPVALTLFTKVQQPSTLHFLLAYP---  181

Query  121  CQDRADWLSVKRLAGWLAAAGY  142
                A   S + +A  L + GY
Sbjct  182  TPQEAMNASCEEIAELLKSTGY  203


>gi|298250621|ref|ZP_06974425.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
 gi|297548625|gb|EFH82492.1| transposase IS111A/IS1328/IS1533 [Ktedonobacter racemifer DSM 
44963]
Length=404

 Score = 70.1 bits (170),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 46/142 (33%), Positives = 72/142 (51%), Gaps = 6/142 (4%)

Query  1    VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTP  60
            +  LLEAG  V  ++P   K +  +  ++G K D+ DA++LA   R++ + LR L PD+P
Sbjct  68   ITHLLEAGFAVYPVNP---KTVDRKRSASGAKTDQIDAYLLAKHGRSEIADLRRLEPDSP  124

Query  61   ATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFD  120
              A L+   R +  L+  +  L NQL A L+  +P  + LF  +  P +L FL   P   
Sbjct  125  LIAELKALTRDQDGLIQMQTRLVNQLTACLKAYYPVALTLFTKVQQPSTLHFLLAYP---  181

Query  121  CQDRADWLSVKRLAGWLAAAGY  142
                A   S + +A  L + GY
Sbjct  182  TPQEAMNASCEEIAELLKSTGY  203



Lambda     K      H
   0.327    0.141    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128329112580


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40