BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2022c

Length=201
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609159|ref|NP_216538.1|  hypothetical protein Rv2022c [Mycob...   416    1e-114
gi|298525524|ref|ZP_07012933.1|  conserved hypothetical protein [...   415    2e-114
gi|253798923|ref|YP_003031924.1|  hypothetical protein TBMG_01961...   414    3e-114
gi|254551045|ref|ZP_05141492.1|  hypothetical protein Mtube_11371...   279    1e-73 
gi|308369596|ref|ZP_07418378.2|  hypothetical protein TMBG_00562 ...   259    1e-67 
gi|340627033|ref|YP_004745485.1|  hypothetical protein MCAN_20451...   253    1e-65 
gi|167970449|ref|ZP_02552726.1|  hypothetical protein MtubH3_2142...   247    7e-64 
gi|229492906|ref|ZP_04386702.1|  helix-turn-helix domain protein ...   151    6e-35 
gi|213692219|ref|YP_002322805.1|  hypothetical protein Blon_1339 ...   125    4e-27 
gi|325830633|ref|ZP_08164054.1|  toxin-antitoxin system, toxin co...   124    6e-27 
gi|257791670|ref|YP_003182276.1|  diaminopimelate decarboxylase [...   124    6e-27 
gi|317487864|ref|ZP_07946456.1|  hypothetical protein HMPREF1023_...   124    6e-27 
gi|320458345|dbj|BAJ68966.1|  conserved hypothetical protein [Bif...   121    5e-26 
gi|290960635|ref|YP_003491817.1|  hypothetical protein SCAB_62611...   119    2e-25 
gi|41410367|ref|NP_963203.1|  hypothetical protein MAP4269c [Myco...   119    3e-25 
gi|271967922|ref|YP_003342118.1|  hypothetical protein Sros_6665 ...   118    5e-25 
gi|288917053|ref|ZP_06411424.1|  conserved hypothetical protein [...   117    9e-25 
gi|315501166|ref|YP_004080053.1|  hypothetical protein ML5_0350 [...   115    3e-24 
gi|331695180|ref|YP_004331419.1|  hypothetical protein Psed_1323 ...   114    6e-24 
gi|271963920|ref|YP_003338116.1|  hypothetical protein Sros_2394 ...   114    8e-24 
gi|271968264|ref|YP_003342460.1|  hypothetical protein Sros_7018 ...   113    2e-23 
gi|288920054|ref|ZP_06414373.1|  conserved hypothetical protein [...   112    3e-23 
gi|302559947|ref|ZP_07312289.1|  RelE family toxin-antitoxin syst...   111    7e-23 
gi|311899628|dbj|BAJ32036.1|  hypothetical protein KSE_62730 [Kit...   110    9e-23 
gi|336176639|ref|YP_004582014.1|  hypothetical protein FsymDg_055...   110    1e-22 
gi|302559461|ref|ZP_07311803.1|  RelE family toxin-antitoxin syst...   110    2e-22 
gi|297563265|ref|YP_003682239.1|  hypothetical protein Ndas_4344 ...   110    2e-22 
gi|315501948|ref|YP_004080835.1|  hypothetical protein ML5_1144 [...   108    5e-22 
gi|291453168|ref|ZP_06592558.1|  helix-turn-helix domain-containi...   108    6e-22 
gi|119025958|ref|YP_909803.1|  hypothetical protein BAD_0940 [Bif...   107    7e-22 
gi|302542944|ref|ZP_07295286.1|  RelE family toxin-antitoxin syst...   107    8e-22 
gi|340628158|ref|YP_004746610.1|  hypothetical protein MCAN_31971...   106    2e-21 
gi|302865403|ref|YP_003834040.1|  hypothetical protein Micau_0900...   106    2e-21 
gi|86741568|ref|YP_481968.1|  hypothetical protein Francci3_2881 ...   105    4e-21 
gi|240169975|ref|ZP_04748634.1|  hypothetical protein MkanA1_1172...   105    5e-21 
gi|86739105|ref|YP_479505.1|  hypothetical protein Francci3_0389 ...   103    2e-20 
gi|15610318|ref|NP_217698.1|  hypothetical protein Rv3182 [Mycoba...   103    2e-20 
gi|167970149|ref|ZP_02552426.1|  hypothetical protein MtubH3_1979...   103    2e-20 
gi|145593885|ref|YP_001158182.1|  helix-turn-helix domain-contain...   102    3e-20 
gi|312195718|ref|YP_004015779.1|  hypothetical protein FraEuI1c_1...   102    4e-20 
gi|302865474|ref|YP_003834111.1|  hypothetical protein Micau_0971...   101    7e-20 
gi|158317563|ref|YP_001510071.1|  helix-turn-helix domain-contain...  99.8    2e-19 
gi|291298157|ref|YP_003509435.1|  hypothetical protein Snas_0628 ...  98.2    5e-19 
gi|288919656|ref|ZP_06413984.1|  conserved hypothetical protein [...  97.8    7e-19 
gi|15842763|ref|NP_337800.1|  hypothetical protein MT3274 [Mycoba...  96.7    2e-18 
gi|336176260|ref|YP_004581635.1|  hypothetical protein FsymDg_013...  96.3    2e-18 
gi|260554033|ref|ZP_05826297.1|  diaminopimelate decarboxylase [A...  95.1    5e-18 
gi|61199614|ref|YP_213949.1|  hypothetical protein pMAC_04 [Acine...  94.7    6e-18 
gi|302560055|ref|ZP_07312397.1|  RelE family toxin-antitoxin syst...  94.7    7e-18 
gi|227114558|ref|ZP_03828214.1|  hypothetical protein PcarbP_1643...  94.0    1e-17 


>gi|15609159|ref|NP_216538.1| hypothetical protein Rv2022c [Mycobacterium tuberculosis H37Rv]
 gi|15841505|ref|NP_336542.1| hypothetical protein MT2078 [Mycobacterium tuberculosis CDC1551]
 gi|31793202|ref|NP_855695.1| hypothetical protein Mb2045c [Mycobacterium bovis AF2122/97]
 34 more sequence titles
 gi|121637906|ref|YP_978129.1| hypothetical protein BCG_2039c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148661836|ref|YP_001283359.1| hypothetical protein MRA_2038 [Mycobacterium tuberculosis H37Ra]
 gi|148823237|ref|YP_001287991.1| hypothetical protein TBFG_12057 [Mycobacterium tuberculosis F11]
 gi|224990400|ref|YP_002645087.1| hypothetical protein JTY_2034 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|254364840|ref|ZP_04980886.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289443517|ref|ZP_06433261.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447640|ref|ZP_06437384.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289570128|ref|ZP_06450355.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574699|ref|ZP_06454926.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746027|ref|ZP_06505405.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289750604|ref|ZP_06509982.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754128|ref|ZP_06513506.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758139|ref|ZP_06517517.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996961|ref|ZP_06802652.1| hypothetical protein Mtub2_21253 [Mycobacterium tuberculosis 
210]
 gi|339632059|ref|YP_004723701.1| hypothetical protein MAF_20340 [Mycobacterium africanum GM041182]
 gi|2896759|emb|CAA17236.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13881747|gb|AAK46356.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31618794|emb|CAD96898.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493553|emb|CAL72027.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134150354|gb|EBA42399.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505988|gb|ABQ73797.1| hypothetical protein MRA_2038 [Mycobacterium tuberculosis H37Ra]
 gi|148721764|gb|ABR06389.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224773513|dbj|BAH26319.1| hypothetical protein JTY_2034 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289416436|gb|EFD13676.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420598|gb|EFD17799.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289539130|gb|EFD43708.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543882|gb|EFD47530.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686555|gb|EFD54043.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691191|gb|EFD58620.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694715|gb|EFD62144.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289713703|gb|EFD77715.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326903635|gb|EGE50568.1| hypothetical protein TBPG_01512 [Mycobacterium tuberculosis W-148]
 gi|339331415|emb|CCC27104.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601943|emb|CCC64617.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=201

 Score =  416 bits (1069),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)

Query  1    VNVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY  60
            +NVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY
Sbjct  1    MNVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY  60

Query  61   HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT  120
            HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT
Sbjct  61   HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT  120

Query  121  VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM  180
            VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM
Sbjct  121  VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM  180

Query  181  FAEHLAQFEDTKPKRRKRKKG  201
            FAEHLAQFEDTKPKRRKRKKG
Sbjct  181  FAEHLAQFEDTKPKRRKRKKG  201


>gi|298525524|ref|ZP_07012933.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495318|gb|EFI30612.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=201

 Score =  415 bits (1066),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 199/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)

Query  1    VNVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY  60
            +NVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY
Sbjct  1    MNVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY  60

Query  61   HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT  120
            HPC+ISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT
Sbjct  61   HPCMISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT  120

Query  121  VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM  180
            VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM
Sbjct  121  VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM  180

Query  181  FAEHLAQFEDTKPKRRKRKKG  201
            FAEHLAQFEDTKPKRRKRKKG
Sbjct  181  FAEHLAQFEDTKPKRRKRKKG  201


>gi|253798923|ref|YP_003031924.1| hypothetical protein TBMG_01961 [Mycobacterium tuberculosis KZN 
1435]
 gi|289554196|ref|ZP_06443406.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289762176|ref|ZP_06521554.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 8 more sequence titles
 gi|297634597|ref|ZP_06952377.1| hypothetical protein MtubK4_10761 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731585|ref|ZP_06960703.1| hypothetical protein MtubKR_10866 [Mycobacterium tuberculosis 
KZN R506]
 gi|313658918|ref|ZP_07815798.1| hypothetical protein MtubKV_10876 [Mycobacterium tuberculosis 
KZN V2475]
 gi|253320426|gb|ACT25029.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289438828|gb|EFD21321.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289709682|gb|EFD73698.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|328458680|gb|AEB04103.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|344219845|gb|AEN00476.1| hypothetical protein MTCTRI2_2056 [Mycobacterium tuberculosis 
CTRI-2]
Length=201

 Score =  414 bits (1065),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 199/201 (99%), Positives = 200/201 (99%), Gaps = 0/201 (0%)

Query  1    VNVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY  60
            +NVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY
Sbjct  1    MNVPWENAHGGALYCLIRGDEFSAWHRLLFQRPGCAESVLACRHFLDGSPVARCSYPEEY  60

Query  61   HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDT  120
            HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPL DT
Sbjct  61   HPCVISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLADT  120

Query  121  VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM  180
            VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM
Sbjct  121  VRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEM  180

Query  181  FAEHLAQFEDTKPKRRKRKKG  201
            FAEHLAQFEDTKPKRRKRKKG
Sbjct  181  FAEHLAQFEDTKPKRRKRKKG  201


>gi|254551045|ref|ZP_05141492.1| hypothetical protein Mtube_11371 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=138

 Score =  279 bits (714),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 136/138 (99%), Positives = 137/138 (99%), Gaps = 0/138 (0%)

Query  64   VISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRG  123
            +ISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPL DTVRG
Sbjct  1    MISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLADTVRG  60

Query  124  SRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAE  183
            SRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAE
Sbjct  61   SRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAE  120

Query  184  HLAQFEDTKPKRRKRKKG  201
            HLAQFEDTKPKRRKRKKG
Sbjct  121  HLAQFEDTKPKRRKRKKG  138


>gi|308369596|ref|ZP_07418378.2| hypothetical protein TMBG_00562 [Mycobacterium tuberculosis SUMu002]
 gi|308372121|ref|ZP_07427469.2| hypothetical protein TMDG_02847 [Mycobacterium tuberculosis SUMu004]
 gi|308377895|ref|ZP_07480804.2| hypothetical protein TMIG_00681 [Mycobacterium tuberculosis SUMu009]
 gi|308403106|ref|ZP_07493767.2| hypothetical protein TMLG_03878 [Mycobacterium tuberculosis SUMu012]
 gi|308327080|gb|EFP15931.1| hypothetical protein TMBG_00562 [Mycobacterium tuberculosis SUMu002]
 gi|308334356|gb|EFP23207.1| hypothetical protein TMDG_02847 [Mycobacterium tuberculosis SUMu004]
 gi|308354268|gb|EFP43119.1| hypothetical protein TMIG_00681 [Mycobacterium tuberculosis SUMu009]
 gi|308365762|gb|EFP54613.1| hypothetical protein TMLG_03878 [Mycobacterium tuberculosis SUMu012]
Length=127

 Score =  259 bits (663),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 126/127 (99%), Positives = 127/127 (100%), Gaps = 0/127 (0%)

Query  75   VGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRP  134
            +GWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRP
Sbjct  1    MGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRP  60

Query  135  GSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPK  194
            GSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPK
Sbjct  61   GSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPK  120

Query  195  RRKRKKG  201
            RRKRKKG
Sbjct  121  RRKRKKG  127


>gi|340627033|ref|YP_004745485.1| hypothetical protein MCAN_20451 [Mycobacterium canettii CIPT 
140010059]
 gi|340005223|emb|CCC44377.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=138

 Score =  253 bits (646),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 124/128 (97%), Positives = 126/128 (99%), Gaps = 0/128 (0%)

Query  64   VISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRG  123
            +ISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALG PLVDTVRG
Sbjct  1    MISRIALLCDSVGWTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGRPLVDTVRG  60

Query  124  SRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAE  183
            SRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRW+QWY EKIKAADEMFAE
Sbjct  61   SRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWSQWYHEKIKAADEMFAE  120

Query  184  HLAQFEDT  191
            HLAQFEDT
Sbjct  121  HLAQFEDT  128


>gi|167970449|ref|ZP_02552726.1| hypothetical protein MtubH3_21423 [Mycobacterium tuberculosis 
H37Ra]
 gi|254232193|ref|ZP_04925520.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|308370892|ref|ZP_07423111.2| hypothetical protein TMCG_00110 [Mycobacterium tuberculosis SUMu003]
 17 more sequence titles
 gi|308373303|ref|ZP_07431783.2| hypothetical protein TMEG_01920 [Mycobacterium tuberculosis SUMu005]
 gi|308374468|ref|ZP_07436167.2| hypothetical protein TMFG_03532 [Mycobacterium tuberculosis SUMu006]
 gi|308375754|ref|ZP_07444987.2| hypothetical protein TMGG_00571 [Mycobacterium tuberculosis SUMu007]
 gi|308376891|ref|ZP_07440413.2| hypothetical protein TMHG_01202 [Mycobacterium tuberculosis SUMu008]
 gi|308379100|ref|ZP_07485031.2| hypothetical protein TMJG_00275 [Mycobacterium tuberculosis SUMu010]
 gi|308380250|ref|ZP_07489249.2| hypothetical protein TMKG_00277 [Mycobacterium tuberculosis SUMu011]
 gi|124601252|gb|EAY60262.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|308330521|gb|EFP19372.1| hypothetical protein TMCG_00110 [Mycobacterium tuberculosis SUMu003]
 gi|308338157|gb|EFP27008.1| hypothetical protein TMEG_01920 [Mycobacterium tuberculosis SUMu005]
 gi|308341849|gb|EFP30700.1| hypothetical protein TMFG_03532 [Mycobacterium tuberculosis SUMu006]
 gi|308345337|gb|EFP34188.1| hypothetical protein TMGG_00571 [Mycobacterium tuberculosis SUMu007]
 gi|308349638|gb|EFP38489.1| hypothetical protein TMHG_01202 [Mycobacterium tuberculosis SUMu008]
 gi|308358160|gb|EFP47011.1| hypothetical protein TMJG_00275 [Mycobacterium tuberculosis SUMu010]
 gi|308362093|gb|EFP50944.1| hypothetical protein TMKG_00277 [Mycobacterium tuberculosis SUMu011]
 gi|323719425|gb|EGB28553.1| hypothetical protein TMMG_01290 [Mycobacterium tuberculosis CDC1551A]
 gi|339294947|gb|AEJ47058.1| hypothetical protein CCDC5079_1868 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298571|gb|AEJ50681.1| hypothetical protein CCDC5180_1844 [Mycobacterium tuberculosis 
CCDC5180]
Length=121

 Score =  247 bits (630),  Expect = 7e-64, Method: Compositional matrix adjust.
 Identities = 120/121 (99%), Positives = 121/121 (100%), Gaps = 0/121 (0%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +ERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS
Sbjct  1    MERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  60

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  200
            EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK
Sbjct  61   EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  120

Query  201  G  201
            G
Sbjct  121  G  121


>gi|229492906|ref|ZP_04386702.1| helix-turn-helix domain protein [Rhodococcus erythropolis SK121]
 gi|229320180|gb|EEN86005.1| helix-turn-helix domain protein [Rhodococcus erythropolis SK121]
Length=118

 Score =  151 bits (381),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 68/113 (61%), Positives = 86/113 (77%), Gaps = 0/113 (0%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGS  136
            W+ DVE +  WL  LD+ +YE V AA+E+LEE GP LG PLVDTV  SRHKNMKELRPGS
Sbjct  4    WSVDVELVEDWLAQLDQSSYEQVVAALELLEERGPQLGRPLVDTVTASRHKNMKELRPGS  63

Query  137  QGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFE  189
             GRSE+R+LFAFDP R+AI+L AG+K+G+WT+WY + I  AD++   H+   E
Sbjct  64   SGRSELRVLFAFDPHRKAILLIAGDKSGQWTKWYKKNIPIADDLLDTHIENLE  116


>gi|213692219|ref|YP_002322805.1| hypothetical protein Blon_1339 [Bifidobacterium longum subsp. 
infantis ATCC 15697]
 gi|213523680|gb|ACJ52427.1| conserved hypothetical protein [Bifidobacterium longum subsp. 
infantis ATCC 15697]
Length=115

 Score =  125 bits (313),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 58/111 (53%), Positives = 77/111 (70%), Gaps = 0/111 (0%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGS  136
            W  ++E I  WL GLDRE+   + AA+EVL+E+GP L  PLV  + GS+ K+MKELRPGS
Sbjct  2    WKIEMEPIKDWLTGLDRESKLQILAAVEVLKEQGPNLRRPLVGKIEGSKIKSMKELRPGS  61

Query  137  QGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
             G+SE+RILF FDP RQAIML  G+K  +W++WY   I  A++ +   L Q
Sbjct  62   AGKSEIRILFVFDPNRQAIMLVGGDKQNKWSKWYKTAIPEAEDRYEAWLKQ  112


>gi|325830633|ref|ZP_08164054.1| toxin-antitoxin system, toxin component, RelE family [Eggerthella 
sp. HGA1]
 gi|325487379|gb|EGC89821.1| toxin-antitoxin system, toxin component, RelE family [Eggerthella 
sp. HGA1]
Length=128

 Score =  124 bits (312),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 62/121 (52%), Positives = 80/121 (67%), Gaps = 5/121 (4%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGS  136
            W  D+  I+ WL   D+ET   + AA+  L + GP LG PLVDTV+GS  KNMKELRP S
Sbjct  8    WEVDLSLIAPWLKEQDQETIVGMTAALNELRDVGPGLGRPLVDTVKGSSFKNMKELRPPS  67

Query  137  QGRSEVRILFAFDPARQAIMLAAGNKAG-----RWTQWYDEKIKAADEMFAEHLAQFEDT  191
             GRSE+RILFAFDP R+A+ L AG+K+      RW +WY   I  AD ++ +HL++ ED 
Sbjct  68   SGRSEIRILFAFDPKRRAVTLLAGDKSAGGTRERWNRWYARAIPRADRLYRQHLSELEDE  127

Query  192  K  192
            K
Sbjct  128  K  128


>gi|257791670|ref|YP_003182276.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243]
 gi|257475567|gb|ACV55887.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243]
Length=124

 Score =  124 bits (312),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 62/121 (52%), Positives = 79/121 (66%), Gaps = 5/121 (4%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGS  136
            W  D+  I+ WL   D+ET   V  A+  L + GP LG PLVDTV+GS  KNMKELRP S
Sbjct  4    WEVDLSLIAPWLKEQDKETIIGVTVALNELRDVGPGLGRPLVDTVKGSSFKNMKELRPPS  63

Query  137  QGRSEVRILFAFDPARQAIMLAAGNKAG-----RWTQWYDEKIKAADEMFAEHLAQFEDT  191
             GRSE+RILFAFDP R+A+ L AG+K+      RW +WY   I  AD ++ +HL++ ED 
Sbjct  64   SGRSEIRILFAFDPKRRAVTLLAGDKSAGGTRERWNRWYARAIPRADRLYRQHLSELEDE  123

Query  192  K  192
            K
Sbjct  124  K  124


>gi|317487864|ref|ZP_07946456.1| hypothetical protein HMPREF1023_00154 [Eggerthella sp. 1_3_56FAA]
 gi|316912990|gb|EFV34507.1| hypothetical protein HMPREF1023_00154 [Eggerthella sp. 1_3_56FAA]
Length=124

 Score =  124 bits (312),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 62/121 (52%), Positives = 80/121 (67%), Gaps = 5/121 (4%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGS  136
            W  D+  I+ WL   D+ET   + AA+  L + GP LG PLVDTV+GS  KNMKELRP S
Sbjct  4    WEVDLSLIAPWLKEQDQETIVGMTAALNELRDVGPGLGRPLVDTVKGSSFKNMKELRPPS  63

Query  137  QGRSEVRILFAFDPARQAIMLAAGNKAG-----RWTQWYDEKIKAADEMFAEHLAQFEDT  191
             GRSE+RILFAFDP R+A+ L AG+K+      RW +WY   I  AD ++ +HL++ ED 
Sbjct  64   SGRSEIRILFAFDPKRRAVTLLAGDKSAGGTRERWNRWYARAIPRADRLYRQHLSELEDE  123

Query  192  K  192
            K
Sbjct  124  K  124


>gi|320458345|dbj|BAJ68966.1| conserved hypothetical protein [Bifidobacterium longum subsp. 
infantis ATCC 15697]
Length=110

 Score =  121 bits (304),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 57/107 (54%), Positives = 75/107 (71%), Gaps = 0/107 (0%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +E I  WL GLDRE+   + AA+EVL+E+GP L  PLV  + GS+ K+MKELRPGS G+S
Sbjct  1    MEPIKDWLTGLDRESKLQILAAVEVLKEQGPNLRRPLVGKIEGSKIKSMKELRPGSAGKS  60

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
            E+RILF FDP RQAIML  G+K  +W++WY   I  A++ +   L Q
Sbjct  61   EIRILFVFDPNRQAIMLVGGDKQNKWSKWYKTAIPEAEDRYEAWLKQ  107


>gi|290960635|ref|YP_003491817.1| hypothetical protein SCAB_62611 [Streptomyces scabiei 87.22]
 gi|260650161|emb|CBG73277.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=129

 Score =  119 bits (298),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 59/118 (50%), Positives = 80/118 (68%), Gaps = 3/118 (2%)

Query  81   VERISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
            VE   +WL+ L   DR+T   V  A+  L+EEGPALG PLVDT++GS   N+KELRPGS 
Sbjct  12   VEPALSWLHDLRRTDRDTLIQVSQAVTALQEEGPALGRPLVDTIKGSALSNLKELRPGSA  71

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKR  195
            G +EVR+LF FDP RQA++L  G+KAG W+ WY   +  A++ +AEHL + +    +R
Sbjct  72   GATEVRLLFVFDPDRQAVILVGGDKAGNWSGWYRVAVPQAEQAYAEHLKRIDGEDGER  129


>gi|41410367|ref|NP_963203.1| hypothetical protein MAP4269c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41399201|gb|AAS06819.1| hypothetical protein MAP_4269c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336460762|gb|EGO39649.1| hypothetical protein MAPs_37390 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=134

 Score =  119 bits (297),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 61/128 (48%), Positives = 81/128 (64%), Gaps = 3/128 (2%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRP-G  135
            W  D+  I AW++ LD E Y+ + AA+E LEE GP    P VDT+ GSRH NMKELRP  
Sbjct  4    WEVDLTLIEAWMDALDDEEYDNLIAALEQLEEHGPITRRPFVDTLEGSRHPNMKELRPRP  63

Query  136  SQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFED--TKP  193
            ++  + +R+LFAFD   +AIML AG+KAG W++WY + I  ADE+F  H  +      K 
Sbjct  64   TKAGAHIRVLFAFDTRSRAIMLIAGDKAGNWSKWYAKHIPIADELFDAHQKRLHKAAAKA  123

Query  194  KRRKRKKG  201
              RK +KG
Sbjct  124  TNRKPRKG  131


>gi|271967922|ref|YP_003342118.1| hypothetical protein Sros_6665 [Streptosporangium roseum DSM 
43021]
 gi|270511097|gb|ACZ89375.1| conserved hypothetical protein [Streptosporangium roseum DSM 
43021]
Length=127

 Score =  118 bits (295),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 63/118 (54%), Positives = 77/118 (66%), Gaps = 4/118 (3%)

Query  84   ISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +  WL+ +   DR T  L+  AI+ L E GP  G PLVD + GS  +NMKELRPGS GRS
Sbjct  11   VREWLHAMRAGDRATSRLIGQAIQTLVEIGPDPGRPLVDRITGSAVRNMKELRPGSSGRS  70

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKR  198
            E+RILFAFDP R A++L AG+KAG W  WYD+ I  A+E FAE +A  E   PK   R
Sbjct  71   EIRILFAFDPRRSAVLLVAGDKAGHWEAWYDKAIPLAEERFAEWVAWLE-ASPKEHDR  127


>gi|288917053|ref|ZP_06411424.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288351593|gb|EFC85799.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length=120

 Score =  117 bits (293),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 58/110 (53%), Positives = 76/110 (70%), Gaps = 3/110 (2%)

Query  81   VERISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
            V  +  WL+ L   DR+T  LV  A+  L +EGP+LG PLVD ++GSR  N+KELRP S 
Sbjct  8    VSEVREWLHDLRRTDRDTAILVGQAVTALLDEGPSLGRPLVDRIKGSRLHNLKELRPASS  67

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
            G SEVRILF FDP R+A++L AG+KAGRW+ WYD  I  A+  +A +L +
Sbjct  68   GTSEVRILFVFDPERRAVLLVAGDKAGRWSAWYDRAIPLAEARYALYLKE  117


>gi|315501166|ref|YP_004080053.1| hypothetical protein ML5_0350 [Micromonospora sp. L5]
 gi|315407785|gb|ADU05902.1| hypothetical protein ML5_0350 [Micromonospora sp. L5]
Length=123

 Score =  115 bits (288),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 56/110 (51%), Positives = 76/110 (70%), Gaps = 0/110 (0%)

Query  78   TADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
            T  VE     L  LDR+++ LV  AI VLE  GPA G PLVD++  SR  N+KELRP S 
Sbjct  8    TGQVEEFLDQLYVLDRDSHRLVNQAILVLERNGPAEGRPLVDSITASRLSNLKELRPPSA  67

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
            GR+E+RILF FDP R A++L AG+K+G+WT+WY E I  A++++  +L +
Sbjct  68   GRTEIRILFVFDPWRSAVLLVAGDKSGQWTRWYREAIPEAEQLYDTYLKE  117


>gi|331695180|ref|YP_004331419.1| hypothetical protein Psed_1323 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326949869|gb|AEA23566.1| hypothetical protein Psed_1323 [Pseudonocardia dioxanivorans 
CB1190]
Length=124

 Score =  114 bits (286),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 3/110 (2%)

Query  81   VERISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
             + +  WL+ L   D +T+  V +AIE L E GP LG PLVD ++GS   N+KELRPGS 
Sbjct  7    TDEVHEWLDELLRGDEDTHYQVVSAIEALAEGGPNLGRPLVDRIKGSSVHNLKELRPGSA  66

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
            G SEVRILFAFDP R +++L AG+KAGRWT+WY + I  A++++  ++ +
Sbjct  67   GSSEVRILFAFDPWRSSVLLVAGDKAGRWTEWYRQAIPRAEQLYETYVKE  116


>gi|271963920|ref|YP_003338116.1| hypothetical protein Sros_2394 [Streptosporangium roseum DSM 
43021]
 gi|270507095|gb|ACZ85373.1| conserved hypothetical protein [Streptosporangium roseum DSM 
43021]
Length=123

 Score =  114 bits (285),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 57/94 (61%), Positives = 67/94 (72%), Gaps = 0/94 (0%)

Query  92   DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRILFAFDPA  151
            D ET +L+  AI+ L EEGP    PLVD ++GSR  NMKELRP S G SE+RI+FAFDPA
Sbjct  22   DSETADLIKDAIDQLAEEGPTARRPLVDRLQGSRFHNMKELRPPSSGSSEIRIIFAFDPA  81

Query  152  RQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHL  185
            R+AI L AG+KAG W  WY + I  ADE F EHL
Sbjct  82   REAIFLVAGDKAGNWEGWYRQAIPLADERFEEHL  115


>gi|271968264|ref|YP_003342460.1| hypothetical protein Sros_7018 [Streptosporangium roseum DSM 
43021]
 gi|270511439|gb|ACZ89717.1| conserved hypothetical protein [Streptosporangium roseum DSM 
43021]
Length=128

 Score =  113 bits (282),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/121 (48%), Positives = 80/121 (67%), Gaps = 3/121 (2%)

Query  81   VERISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
            +E + +W   L   D ++  L+  AI+ L E GPALG PLVDT+      N+KELRPGS+
Sbjct  8    LEPVESWFLKLCESDPDSATLIERAIDRLAEAGPALGRPLVDTLEDDDLNNLKELRPGSR  67

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRK  197
            GRSE+RI+F FDP R+AI L AG+KAG+W++WYDE I  A   +AE+  + +  K K  +
Sbjct  68   GRSEIRIVFIFDPDREAIFLVAGDKAGKWSRWYDEAIPLAKSRYAEYCTEKKAEKTKEDR  127

Query  198  R  198
            R
Sbjct  128  R  128


>gi|288920054|ref|ZP_06414373.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288348537|gb|EFC82795.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length=121

 Score =  112 bits (280),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 53/99 (54%), Positives = 71/99 (72%), Gaps = 0/99 (0%)

Query  92   DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRILFAFDPA  151
            D  + +LV  AI+VL E GPALG PLVD ++GS + +MKELRPGS G +E+R++F FDP 
Sbjct  21   DPTSADLVSEAIDVLAENGPALGRPLVDRLKGSIYHHMKELRPGSAGSTEIRMIFVFDPR  80

Query  152  RQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFED  190
            R+AI L AG+KAG W +WY   I  ADE F +HL + ++
Sbjct  81   REAIFLVAGDKAGAWREWYRTAIPLADERFTDHLTRLKE  119


>gi|302559947|ref|ZP_07312289.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302477565|gb|EFL40658.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=128

 Score =  111 bits (277),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 53/112 (48%), Positives = 74/112 (67%), Gaps = 3/112 (2%)

Query  81   VERISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
            V  ++AW   L   D ++ E V  AI++L   GP LG PLVD ++G+   ++KELRPGS 
Sbjct  12   VTEVAAWFEALAEDDWDSAEQVEDAIDMLAATGPTLGRPLVDRIKGADSHHLKELRPGST  71

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFE  189
            G SE+RILFAFDP R+A++L AG+KAG W +WYD  I  A++ +  H+   E
Sbjct  72   GSSEIRILFAFDPVRRAVLLVAGDKAGNWQRWYDANIPIAEKRYQAHVTDLE  123


>gi|311899628|dbj|BAJ32036.1| hypothetical protein KSE_62730 [Kitasatospora setae KM-6054]
Length=112

 Score =  110 bits (276),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 53/92 (58%), Positives = 66/92 (72%), Gaps = 0/92 (0%)

Query  94   ETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRILFAFDPARQ  153
            E  + V AA++ L EEGP LG PLVD ++ SRH +MKELRP   G SE+RILFAFDP R+
Sbjct  14   EVADQVAAAVDKLAEEGPTLGRPLVDRIKRSRHHHMKELRPRVGGESEIRILFAFDPERE  73

Query  154  AIMLAAGNKAGRWTQWYDEKIKAADEMFAEHL  185
            AI+L AG+K+G+W  WYD  I  AD+ F  HL
Sbjct  74   AILLVAGDKSGQWNLWYDLNIPIADDRFDRHL  105


>gi|336176639|ref|YP_004582014.1| hypothetical protein FsymDg_0559 [Frankia symbiont of Datisca 
glomerata]
 gi|334857619|gb|AEH08093.1| Protein of unknown function DUF2137 [Frankia symbiont of Datisca 
glomerata]
Length=140

 Score =  110 bits (274),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 55/116 (48%), Positives = 74/116 (64%), Gaps = 5/116 (4%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            V  +  W++GLD  T+  V  AI++L E GP LG PLVDT+ GS   N+KELRPG+    
Sbjct  30   VNEVRDWIDGLDAATHARVVQAIDLLAETGPGLGRPLVDTISGSSLPNLKELRPGT----  85

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRR  196
             VRILF FDP R +I+L AG+KAG+W  WYDE I  A++ +  +L +    +  RR
Sbjct  86   -VRILFCFDPWRSSILLVAGDKAGQWNAWYDEAIPLAEQRYKSYLVERGQEEGDRR  140


>gi|302559461|ref|ZP_07311803.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302477079|gb|EFL40172.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=130

 Score =  110 bits (274),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 57/121 (48%), Positives = 79/121 (66%), Gaps = 4/121 (3%)

Query  74   SVGWTADVE-RISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNM  129
            S+ W  ++   + +WL  L   D    +L+  AI++L   GP+LG PLVD + G R  N+
Sbjct  3    SMNWEINLHPAVESWLLKLAEEDPAAADLIETAIDMLAVSGPSLGRPLVDRLSGCRTHNL  62

Query  130  KELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFE  189
            KELRPGS GR+EVRILF FDP R+AI+L AG+KAGRW  WY E +  A+  + E+LA  +
Sbjct  63   KELRPGSSGRTEVRILFVFDPRREAILLVAGDKAGRWRDWYRESVPLAEARYHEYLAAAD  122

Query  190  D  190
            +
Sbjct  123  E  123


>gi|297563265|ref|YP_003682239.1| hypothetical protein Ndas_4344 [Nocardiopsis dassonvillei subsp. 
dassonvillei DSM 43111]
 gi|296847713|gb|ADH69733.1| Protein of unknown function DUF2137 [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
Length=122

 Score =  110 bits (274),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 49/92 (54%), Positives = 67/92 (73%), Gaps = 0/92 (0%)

Query  101  AAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLAAG  160
            AA+  LE  GP L  PL D V+GSR  N+KELRPGS GRSE+R+LF FDP RQA++L AG
Sbjct  30   AALSQLESHGPDLTRPLADRVKGSRIHNLKELRPGSSGRSEIRVLFVFDPERQAVLLVAG  89

Query  161  NKAGRWTQWYDEKIKAADEMFAEHLAQFEDTK  192
            +K+G+W +WY + I  A++ + EHL + +D +
Sbjct  90   DKSGQWNRWYQKNIPVAEQRYLEHLRRRKDEQ  121


>gi|315501948|ref|YP_004080835.1| hypothetical protein ML5_1144 [Micromonospora sp. L5]
 gi|315408567|gb|ADU06684.1| hypothetical protein ML5_1144 [Micromonospora sp. L5]
Length=120

 Score =  108 bits (270),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 57/121 (48%), Positives = 75/121 (62%), Gaps = 13/121 (10%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            V+ +  WL+ LD  T+  V  AI++L E GP LG PLVDT+ GS   N+KELRPG+    
Sbjct  11   VDEVRQWLDTLDASTHARVVQAIDLLAEHGPGLGRPLVDTIHGSSMANLKELRPGT----  66

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  200
             VRILFAFDP R +I+L AG+K+GRW  WY E I  A+  +  +L        K R R++
Sbjct  67   -VRILFAFDPWRSSILLVAGDKSGRWKTWYQEAIPVAEHRYELYL--------KDRAREE  117

Query  201  G  201
            G
Sbjct  118  G  118


>gi|291453168|ref|ZP_06592558.1| helix-turn-helix domain-containing protein [Streptomyces albus 
J1074]
 gi|291356117|gb|EFE83019.1| helix-turn-helix domain-containing protein [Streptomyces albus 
J1074]
Length=120

 Score =  108 bits (269),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 59/121 (49%), Positives = 80/121 (67%), Gaps = 13/121 (10%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            V+ +  WL  LD   +  V  A++VL EEGPALG PLVDT+RGS   N+KELRPG+    
Sbjct  10   VDEVRVWLASLDGAAHARVVQALDVLAEEGPALGRPLVDTLRGSAVANLKELRPGT----  65

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  200
             VRILFAFDP R +I+L AG+K+G+ T+WY E I  A++ +A +L        K R+R++
Sbjct  66   -VRILFAFDPWRSSILLVAGDKSGQRTEWYQEAIPLAEQRYALYL--------KEREREE  116

Query  201  G  201
            G
Sbjct  117  G  117


>gi|119025958|ref|YP_909803.1| hypothetical protein BAD_0940 [Bifidobacterium adolescentis ATCC 
15703]
 gi|118765542|dbj|BAF39721.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length=172

 Score =  107 bits (268),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 51/106 (49%), Positives = 72/106 (68%), Gaps = 1/106 (0%)

Query  77   WTADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRH-KNMKELRPG  135
            W  ++E I+ WLN LD ++   + AA+ +LEE+GP L  P+V  ++GS    +MKELRPG
Sbjct  53   WKVELEPIADWLNTLDHKSRVQILAAVSLLEEQGPDLKRPIVGKIKGSSLIPSMKELRPG  112

Query  136  SQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMF  181
            S GRSE+RILF FDP R+AIML  G+K  +W +WY + I  A+  +
Sbjct  113  SSGRSEIRILFVFDPKRKAIMLVGGDKQRKWDKWYRKAIPEAERRY  158


>gi|302542944|ref|ZP_07295286.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302460562|gb|EFL23655.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=113

 Score =  107 bits (268),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 69/98 (71%), Gaps = 0/98 (0%)

Query  92   DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRILFAFDPA  151
            D  + + V  A+E+L E GP LG P+ D + GSR  N+KELRPGS GR+E+RILF FDP 
Sbjct  12   DPHSADAVEQAVELLAEVGPGLGRPMADVIHGSRLHNLKELRPGSAGRTEIRILFVFDPE  71

Query  152  RQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFE  189
            R+ I+L AG+KAG+W +WYDE +  A++ + ++L   E
Sbjct  72   REGILLVAGDKAGQWRRWYDEAVPLAEKRYQQYLDHKE  109


>gi|340628158|ref|YP_004746610.1| hypothetical protein MCAN_31971 [Mycobacterium canettii CIPT 
140010059]
 gi|340006348|emb|CCC45528.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=114

 Score =  106 bits (264),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 53/107 (50%), Positives = 67/107 (63%), Gaps = 3/107 (2%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            + ++  W   L+R+    V  AI++LE EGP LG P+VD V  S   NMKELRP     +
Sbjct  6    LPQVERWFFALNRDAMASVTGAIDLLEMEGPTLGRPVVDKVNDSTFHNMKELRPAG---T  62

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
             +RILFAFDPARQAI+L  G+KAG W +WYD  I  AD+ F   LA 
Sbjct  63   SIRILFAFDPARQAILLLGGDKAGNWKRWYDNNIPIADQRFENWLAS  109


>gi|302865403|ref|YP_003834040.1| hypothetical protein Micau_0900 [Micromonospora aurantiaca ATCC 
27029]
 gi|302568262|gb|ADL44464.1| hypothetical protein Micau_0900 [Micromonospora aurantiaca ATCC 
27029]
Length=120

 Score =  106 bits (264),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 56/121 (47%), Positives = 74/121 (62%), Gaps = 13/121 (10%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            V+ +  WL+ LD   +  V  AI++L E GP LG PLVDT+ GS   N+KELRPG+    
Sbjct  11   VDEVRQWLDTLDASAHARVVQAIDLLAEHGPGLGRPLVDTIHGSSMANLKELRPGT----  66

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  200
             VRILFAFDP R +I+L AG+K+GRW  WY E I  A+  +  +L        K R R++
Sbjct  67   -VRILFAFDPWRSSILLVAGDKSGRWKTWYQEAIPVAEHRYELYL--------KDRAREE  117

Query  201  G  201
            G
Sbjct  118  G  118


>gi|86741568|ref|YP_481968.1| hypothetical protein Francci3_2881 [Frankia sp. CcI3]
 gi|86568430|gb|ABD12239.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=116

 Score =  105 bits (262),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 51/104 (50%), Positives = 70/104 (68%), Gaps = 0/104 (0%)

Query  86   AWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRIL  145
            AW+N LD  +  LV  AI+ L + GP+LG PLVD + GS   N+KELRP S G SE+R+L
Sbjct  7    AWVNELDPRSRALVVDAIDRLADAGPSLGRPLVDRLVGSEIHNLKELRPASAGTSEIRVL  66

Query  146  FAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFE  189
            F FDP R AI+L  G+K+G W+ WY   I  A+ ++AE++ + E
Sbjct  67   FVFDPWRCAILLVGGDKSGDWSGWYRTAIPRAETLYAEYMKERE  110


>gi|240169975|ref|ZP_04748634.1| hypothetical protein MkanA1_11729 [Mycobacterium kansasii ATCC 
12478]
Length=117

 Score =  105 bits (261),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 52/107 (49%), Positives = 68/107 (64%), Gaps = 3/107 (2%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +E + AW   LD E    V  AI++LE EGP LG P VD V+GS+  ++KELRP     +
Sbjct  10   LEEVEAWYFSLDDEAMAAVTGAIDLLELEGPTLGRPTVDKVKGSKFHSLKELRPAG---T  66

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
             +RILF FDP RQAI+L  G+KAG W +WY+E I  AD+ +   LA 
Sbjct  67   SIRILFIFDPRRQAILLLGGDKAGNWKRWYEENIPVADQRYENWLAN  113


>gi|86739105|ref|YP_479505.1| hypothetical protein Francci3_0389 [Frankia sp. CcI3]
 gi|86565967|gb|ABD09776.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=130

 Score =  103 bits (257),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/121 (48%), Positives = 75/121 (62%), Gaps = 10/121 (8%)

Query  84   ISAWLNGLDRE---TYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +  WL  L RE   +Y  V AAI++L E GPALG PLVDT++GS   N+KELRP S    
Sbjct  16   VREWLRSLRREEPDSYRSVNAAIDMLAEAGPALGRPLVDTLKGSTISNLKELRPRSGREV  75

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  200
             +R++F FDP  QA++L AGNKAG W+ WY   I AA+ ++   LA         RKR++
Sbjct  76   AIRVIFVFDPWSQAVLLVAGNKAGDWSHWYRAAIPAAEVVYDGWLAV-------ERKRRE  128

Query  201  G  201
            G
Sbjct  129  G  129


>gi|15610318|ref|NP_217698.1| hypothetical protein Rv3182 [Mycobacterium tuberculosis H37Rv]
 gi|31794360|ref|NP_856853.1| hypothetical protein Mb3208 [Mycobacterium bovis AF2122/97]
 gi|121639068|ref|YP_979292.1| hypothetical protein BCG_3208 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 70 more sequence titles
 gi|148663038|ref|YP_001284561.1| hypothetical protein MRA_3216 [Mycobacterium tuberculosis H37Ra]
 gi|148824377|ref|YP_001289131.1| hypothetical protein TBFG_13204 [Mycobacterium tuberculosis F11]
 gi|224991560|ref|YP_002646249.1| hypothetical protein JTY_3203 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800217|ref|YP_003033218.1| hypothetical protein TBMG_03226 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233795|ref|ZP_04927120.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|289444749|ref|ZP_06434493.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448864|ref|ZP_06438608.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555456|ref|ZP_06444666.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289571398|ref|ZP_06451625.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575896|ref|ZP_06456123.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746996|ref|ZP_06506374.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751863|ref|ZP_06511241.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755302|ref|ZP_06514680.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759317|ref|ZP_06518695.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763366|ref|ZP_06522744.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294993882|ref|ZP_06799573.1| hypothetical protein Mtub2_05041 [Mycobacterium tuberculosis 
210]
 gi|297635826|ref|ZP_06953606.1| hypothetical protein MtubK4_16962 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732823|ref|ZP_06961941.1| hypothetical protein MtubKR_17117 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526657|ref|ZP_07014066.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306777500|ref|ZP_07415837.1| hypothetical protein TMAG_03644 [Mycobacterium tuberculosis SUMu001]
 gi|306782225|ref|ZP_07420562.1| hypothetical protein TMBG_01875 [Mycobacterium tuberculosis SUMu002]
 gi|306786047|ref|ZP_07424369.1| hypothetical protein TMCG_01601 [Mycobacterium tuberculosis SUMu003]
 gi|306790413|ref|ZP_07428735.1| hypothetical protein TMDG_02014 [Mycobacterium tuberculosis SUMu004]
 gi|306794936|ref|ZP_07433238.1| hypothetical protein TMEG_03574 [Mycobacterium tuberculosis SUMu005]
 gi|306799137|ref|ZP_07437439.1| hypothetical protein TMFG_00388 [Mycobacterium tuberculosis SUMu006]
 gi|306804979|ref|ZP_07441647.1| hypothetical protein TMHG_02397 [Mycobacterium tuberculosis SUMu008]
 gi|306809166|ref|ZP_07445834.1| hypothetical protein TMGG_02725 [Mycobacterium tuberculosis SUMu007]
 gi|306969270|ref|ZP_07481931.1| hypothetical protein TMIG_02693 [Mycobacterium tuberculosis SUMu009]
 gi|306973618|ref|ZP_07486279.1| hypothetical protein TMJG_03359 [Mycobacterium tuberculosis SUMu010]
 gi|307081328|ref|ZP_07490498.1| hypothetical protein TMKG_02434 [Mycobacterium tuberculosis SUMu011]
 gi|307085930|ref|ZP_07495043.1| hypothetical protein TMLG_03533 [Mycobacterium tuberculosis SUMu012]
 gi|313660156|ref|ZP_07817036.1| hypothetical protein MtubKV_17122 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633190|ref|YP_004724832.1| hypothetical protein MAF_31910 [Mycobacterium africanum GM041182]
 gi|2827592|emb|CAA16647.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31619956|emb|CAD95300.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494716|emb|CAL73197.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124599324|gb|EAY58428.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148507190|gb|ABQ74999.1| hypothetical protein MRA_3216 [Mycobacterium tuberculosis H37Ra]
 gi|148722904|gb|ABR07529.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774675|dbj|BAH27481.1| hypothetical protein JTY_3203 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253321720|gb|ACT26323.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289417668|gb|EFD14908.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421822|gb|EFD19023.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440088|gb|EFD22581.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289540327|gb|EFD44905.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289545152|gb|EFD48800.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687524|gb|EFD55012.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692450|gb|EFD59879.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695889|gb|EFD63318.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710872|gb|EFD74888.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289714881|gb|EFD78893.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496451|gb|EFI31745.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214210|gb|EFO73609.1| hypothetical protein TMAG_03644 [Mycobacterium tuberculosis SUMu001]
 gi|308324984|gb|EFP13835.1| hypothetical protein TMBG_01875 [Mycobacterium tuberculosis SUMu002]
 gi|308329203|gb|EFP18054.1| hypothetical protein TMCG_01601 [Mycobacterium tuberculosis SUMu003]
 gi|308333035|gb|EFP21886.1| hypothetical protein TMDG_02014 [Mycobacterium tuberculosis SUMu004]
 gi|308336721|gb|EFP25572.1| hypothetical protein TMEG_03574 [Mycobacterium tuberculosis SUMu005]
 gi|308340561|gb|EFP29412.1| hypothetical protein TMFG_00388 [Mycobacterium tuberculosis SUMu006]
 gi|308344498|gb|EFP33349.1| hypothetical protein TMGG_02725 [Mycobacterium tuberculosis SUMu007]
 gi|308348496|gb|EFP37347.1| hypothetical protein TMHG_02397 [Mycobacterium tuberculosis SUMu008]
 gi|308353126|gb|EFP41977.1| hypothetical protein TMIG_02693 [Mycobacterium tuberculosis SUMu009]
 gi|308357038|gb|EFP45889.1| hypothetical protein TMJG_03359 [Mycobacterium tuberculosis SUMu010]
 gi|308360993|gb|EFP49844.1| hypothetical protein TMKG_02434 [Mycobacterium tuberculosis SUMu011]
 gi|308364597|gb|EFP53448.1| hypothetical protein TMLG_03533 [Mycobacterium tuberculosis SUMu012]
 gi|323718044|gb|EGB27226.1| hypothetical protein TMMG_02323 [Mycobacterium tuberculosis CDC1551A]
 gi|326902590|gb|EGE49523.1| hypothetical protein TBPG_00439 [Mycobacterium tuberculosis W-148]
 gi|328459954|gb|AEB05377.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339332546|emb|CCC28261.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341603107|emb|CCC65785.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221015|gb|AEN01646.1| hypothetical protein MTCTRI2_3245 [Mycobacterium tuberculosis 
CTRI-2]
Length=114

 Score =  103 bits (256),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 50/99 (51%), Positives = 64/99 (65%), Gaps = 3/99 (3%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            + ++  W   L+R+    V  AI++LE EGP LG P+VD V  S   NMKELRP     +
Sbjct  6    LPQVERWFFALNRDAMASVTGAIDLLEMEGPTLGRPVVDKVNDSTFHNMKELRPAG---T  62

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADE  179
             +RILFAFDPARQAI+L  G+KAG W +WYD  I  AD+
Sbjct  63   SIRILFAFDPARQAILLLGGDKAGNWKRWYDNNIPIADQ  101


>gi|167970149|ref|ZP_02552426.1| hypothetical protein MtubH3_19798 [Mycobacterium tuberculosis 
H37Ra]
 gi|254365807|ref|ZP_04981852.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552275|ref|ZP_05142722.1| hypothetical protein Mtube_17793 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|134151320|gb|EBA43365.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|339296016|gb|AEJ48127.1| hypothetical protein CCDC5079_2937 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299627|gb|AEJ51737.1| hypothetical protein CCDC5180_2900 [Mycobacterium tuberculosis 
CCDC5180]
Length=112

 Score =  103 bits (256),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 50/99 (51%), Positives = 64/99 (65%), Gaps = 3/99 (3%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            + ++  W   L+R+    V  AI++LE EGP LG P+VD V  S   NMKELRP     +
Sbjct  4    LPQVERWFFALNRDAMASVTGAIDLLEMEGPTLGRPVVDKVNDSTFHNMKELRPAG---T  60

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADE  179
             +RILFAFDPARQAI+L  G+KAG W +WYD  I  AD+
Sbjct  61   SIRILFAFDPARQAILLLGGDKAGNWKRWYDNNIPIADQ  99


>gi|145593885|ref|YP_001158182.1| helix-turn-helix domain-containing protein [Salinispora tropica 
CNB-440]
 gi|145594207|ref|YP_001158504.1| helix-turn-helix domain-containing protein [Salinispora tropica 
CNB-440]
 gi|145303222|gb|ABP53804.1| helix-turn-helix domain protein [Salinispora tropica CNB-440]
 gi|145303544|gb|ABP54126.1| helix-turn-helix domain protein [Salinispora tropica CNB-440]
Length=225

 Score =  102 bits (255),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 50/90 (56%), Positives = 62/90 (69%), Gaps = 5/90 (5%)

Query  81   VERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            V  +  W++GLD  T+  V  AI++L E GP LG PLVDT+ GS   N+KELRP +    
Sbjct  11   VNEVQEWMDGLDPLTHARVVQAIDLLAEAGPGLGRPLVDTIHGSALANLKELRPAT----  66

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWY  170
             VRILFAFDP R +I+L AG+KAGRW QWY
Sbjct  67   -VRILFAFDPWRSSILLVAGDKAGRWQQWY  95


>gi|312195718|ref|YP_004015779.1| hypothetical protein FraEuI1c_1853 [Frankia sp. EuI1c]
 gi|311227054|gb|ADP79909.1| protein of unknown function DUF891 [Frankia sp. EuI1c]
Length=140

 Score =  102 bits (254),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 60/129 (47%), Positives = 74/129 (58%), Gaps = 11/129 (8%)

Query  77   WTADVER-ISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKEL  132
            WT    R +  WL  L   D  TY  V  AI++L + GPALG P+VDT+ GS  KN+KEL
Sbjct  18   WTIKTTREVRDWLRALRQADPVTYRSVNVAIDMLADAGPALGRPVVDTLAGSEIKNLKEL  77

Query  133  RPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTK  192
            RP S     +RILF FDP  QA++L AGNKAG WT WY+  I  A+  +   LA      
Sbjct  78   RPRSGRTVAIRILFVFDPWSQAVLLIAGNKAGDWTGWYETAIPVAEAAYDGWLAA-----  132

Query  193  PKRRKRKKG  201
               RKR+ G
Sbjct  133  --ERKRRGG  139


>gi|302865474|ref|YP_003834111.1| hypothetical protein Micau_0971 [Micromonospora aurantiaca ATCC 
27029]
 gi|302568333|gb|ADL44535.1| protein of unknown function DUF891 [Micromonospora aurantiaca 
ATCC 27029]
Length=139

 Score =  101 bits (251),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 58/129 (45%), Positives = 77/129 (60%), Gaps = 8/129 (6%)

Query  72   CDSVGWTADVE-RISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHK  127
             D   W+  V   +  WL  L   D  +YE V  A++ L E GP LG PLVDT+RGS  +
Sbjct  12   ADGKRWSVRVTGEVRHWLRDLRDHDPSSYESVRVAVDKLAEVGPGLGRPLVDTLRGSSLR  71

Query  128  NMKELRPGSQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
            N+KELRP S     +R+LF FDP  QA++L AGNKAG WT+WY + I AA+  +   L  
Sbjct  72   NLKELRPRSGRDVAIRVLFVFDPWSQAVLLVAGNKAGNWTRWYRQHIPAAEVAYKAWL--  129

Query  188  FEDTKPKRR  196
              D++ +RR
Sbjct  130  --DSERERR  136


>gi|158317563|ref|YP_001510071.1| helix-turn-helix domain-containing protein [Frankia sp. EAN1pec]
 gi|158112968|gb|ABW15165.1| helix-turn-helix domain protein [Frankia sp. EAN1pec]
Length=115

 Score = 99.8 bits (247),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 52/103 (51%), Positives = 67/103 (66%), Gaps = 3/103 (2%)

Query  87   WLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVR  143
            WL+ L   D  TY  V  AI++L E GP LG PLVDT++GS  KN+KELRP S     +R
Sbjct  4    WLHVLRQSDPATYRSVNIAIDMLAEIGPGLGRPLVDTLQGSTIKNLKELRPRSGRDVAIR  63

Query  144  ILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLA  186
            ++F FDP  QA++L AGNKAG W++WY   I  A+  + E LA
Sbjct  64   VIFVFDPWSQAVLLVAGNKAGDWSRWYRTAIPTAEVAYGEWLA  106


>gi|291298157|ref|YP_003509435.1| hypothetical protein Snas_0628 [Stackebrandtia nassauensis DSM 
44728]
 gi|290567377|gb|ADD40342.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM 
44728]
Length=127

 Score = 98.2 bits (243),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 50/104 (49%), Positives = 70/104 (68%), Gaps = 5/104 (4%)

Query  87   WLNGLDRE---TYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVR  143
            W+  L +E   ++E V AA+E L+E GPAL  P V  + GS +++M+ELR  +  R  +R
Sbjct  16   WIQQLQKEDPDSFEHVIAALERLQEHGPALRRPTVGAIEGSAYRHMRELRARNGSRVSIR  75

Query  144  ILFAFDPARQAIMLAAGNKAG--RWTQWYDEKIKAADEMFAEHL  185
            +LFAFDP R+AI L AGNKAG  +WT WYD+ +K AD  +A +L
Sbjct  76   LLFAFDPERRAIFLVAGNKAGQRQWTVWYDKAVKEADARYAAYL  119


>gi|288919656|ref|ZP_06413984.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288348945|gb|EFC83194.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length=140

 Score = 97.8 bits (242),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 51/106 (49%), Positives = 66/106 (63%), Gaps = 3/106 (2%)

Query  84   ISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +  WL  L   D  TY  V  AI++L E GP LG PLVDT++GS  KN+KELRP S    
Sbjct  26   VREWLYVLRQSDPATYRSVNIAIDMLAEIGPGLGRPLVDTLQGSTIKNLKELRPRSGRDV  85

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLA  186
             +R++F FDP  QA++L AGNKAG W +WY   I  A+  + + LA
Sbjct  86   AIRVIFVFDPWSQAVLLVAGNKAGDWARWYRTAIPMAETAYGDWLA  131


>gi|15842763|ref|NP_337800.1| hypothetical protein MT3274 [Mycobacterium tuberculosis CDC1551]
 gi|13883087|gb|AAK47614.1| hypothetical protein MT3274 [Mycobacterium tuberculosis CDC1551]
Length=94

 Score = 96.7 bits (239),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 49/89 (56%), Positives = 58/89 (66%), Gaps = 3/89 (3%)

Query  99   VFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRSEVRILFAFDPARQAIMLA  158
            V  AI++LE EGP LG P+VD V  S   NMKELRP     + +RILFAFDPARQAI+L 
Sbjct  4    VTGAIDLLEMEGPTLGRPVVDKVNDSTFHNMKELRPAG---TSIRILFAFDPARQAILLL  60

Query  159  AGNKAGRWTQWYDEKIKAADEMFAEHLAQ  187
             G+KAG W +WYD  I  AD+     LA 
Sbjct  61   GGDKAGNWKRWYDNNIPIADQRSENWLAS  89


>gi|336176260|ref|YP_004581635.1| hypothetical protein FsymDg_0134 [Frankia symbiont of Datisca 
glomerata]
 gi|334857240|gb|AEH07714.1| Protein of unknown function DUF2137 [Frankia symbiont of Datisca 
glomerata]
Length=131

 Score = 96.3 bits (238),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 54/121 (45%), Positives = 72/121 (60%), Gaps = 10/121 (8%)

Query  84   ISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQGRS  140
            +  WL  L   D   Y  V  AI++L E GP LG PLVDT++GS  KN+KELRP S    
Sbjct  17   VREWLRALRQTDPGAYRSVNVAIDMLAEIGPGLGRPLVDTLQGSTVKNLKELRPRSGRDV  76

Query  141  EVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFEDTKPKRRKRKK  200
             ++++F FDP  QA++L AGNKAG W++WY   I AA+  +   LA         RKR++
Sbjct  77   AIQVIFVFDPWSQAVLLVAGNKAGDWSRWYRTAIPAAEVAYGGWLAV-------ERKRRE  129

Query  201  G  201
            G
Sbjct  130  G  130


>gi|260554033|ref|ZP_05826297.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624]
 gi|260404847|gb|EEW98353.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624]
Length=118

 Score = 95.1 bits (235),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 51/115 (45%), Positives = 73/115 (64%), Gaps = 3/115 (2%)

Query  77   WTA-DVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPG  135
            WT    +  + WL   D+ T E V AA+ VL+++GP+LG PLVDTV  S+  NMK+LR  
Sbjct  2    WTVITTDLFNEWLAQQDQSTQEKVLAALVVLQQQGPSLGRPLVDTVYDSKFTNMKDLRVQ  61

Query  136  SQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFED  190
             +G+S +R  FAFDP RQAI+L  G+K G+  ++Y E +  AD+ +  HL+   D
Sbjct  62   HRGKS-LRAFFAFDPLRQAIVLCIGDKGGK-KRFYKEMLDIADQQYEIHLSTLGD  114


>gi|61199614|ref|YP_213949.1| hypothetical protein pMAC_04 [Acinetobacter baumannii]
 gi|260554296|ref|ZP_05826544.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624]
 gi|260558162|ref|ZP_05830368.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606]
 gi|47060067|gb|AAT09652.1| hypothetical protein [Acinetobacter baumannii]
 gi|260404569|gb|EEW98091.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624]
 gi|260408349|gb|EEX01661.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606]
Length=118

 Score = 94.7 bits (234),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 52/115 (46%), Positives = 72/115 (63%), Gaps = 3/115 (2%)

Query  77   WTA-DVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPG  135
            WT    +  + WL   D  T E V AA+ VL+++GP+LG PLVDTV  S+  NMKELR  
Sbjct  2    WTVITTDLFNEWLEQQDEATQEKVLAALVVLQQQGPSLGRPLVDTVYDSKFTNMKELRVQ  61

Query  136  SQGRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFED  190
             +G+  +R  FAFDP RQAI+L  G+K+ +  ++Y E +  ADE +A HL+   D
Sbjct  62   HRGKP-LRAFFAFDPLRQAIVLCIGDKSNK-KRFYTEMLAIADEQYALHLSTLGD  114


>gi|302560055|ref|ZP_07312397.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302477673|gb|EFL40766.1| RelE family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=157

 Score = 94.7 bits (234),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 52/116 (45%), Positives = 68/116 (59%), Gaps = 5/116 (4%)

Query  82   ERISAWLNGL---DRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQG  138
            E +  W+  L   D E++  V AA+E L+E GPAL  P V  +  SR +NM+ELRP + G
Sbjct  36   EDVLDWIKTLAKEDPESHLHVIAALERLQEVGPALRRPTVGAIERSRFRNMRELRPRNGG  95

Query  139  RSEVRILFAFDPARQAIMLAAGNKAG--RWTQWYDEKIKAADEMFAEHLAQFEDTK  192
               +R+LF FDP R+AI L AGNKA   RW  WY   IK AD+ +  +L   E  K
Sbjct  96   TVSIRMLFVFDPERRAIFLVAGNKATGRRWASWYPRAIKEADDKYTAYLEALEQEK  151


>gi|227114558|ref|ZP_03828214.1| hypothetical protein PcarbP_16433 [Pectobacterium carotovorum 
subsp. brasiliensis PBR1692]
Length=117

 Score = 94.0 bits (232),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 52/112 (47%), Positives = 66/112 (59%), Gaps = 3/112 (2%)

Query  78   TADVERISAWLNGLDRETYELVFAAIEVLEEEGPALGCPLVDTVRGSRHKNMKELRPGSQ  137
            T DV    +W + L+      V AA+ VL E+GP L  P  DTV+GSR+ NMKELR  S 
Sbjct  6    TTDV--FDSWFSTLNDRDRAYVLAALIVLREKGPMLSRPYADTVKGSRYSNMKELRIQSG  63

Query  138  GRSEVRILFAFDPARQAIMLAAGNKAGRWTQWYDEKIKAADEMFAEHLAQFE  189
            G   +R  FAFDP R  I+L AGNK+G   ++YDE I  AD  F  +L + E
Sbjct  64   GMP-IRAFFAFDPHRTGILLCAGNKSGNEKRFYDEMIPLADREFTTYLKKSE  114



Lambda     K      H
   0.322    0.137    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 217214446392


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40