BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2026c
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609163|ref|NP_216542.1| hypothetical protein Rv2026c [Mycob... 590 1e-166
gi|340627037|ref|YP_004745489.1| hypothetical protein MCAN_20491... 583 8e-165
gi|306793487|ref|ZP_07431789.1| hypothetical protein TMEG_01925 ... 520 1e-145
gi|240170463|ref|ZP_04749122.1| hypothetical protein MkanA1_1421... 439 3e-121
gi|296169097|ref|ZP_06850756.1| universal stress protein family ... 406 2e-111
gi|118617761|ref|YP_906093.1| hypothetical protein MUL_2236 [Myc... 405 4e-111
gi|183982997|ref|YP_001851288.1| hypothetical protein MMAR_2995 ... 390 1e-106
gi|118469207|ref|YP_888229.1| universal stress protein family pr... 351 6e-95
gi|118466893|ref|YP_881698.1| universal stress protein family pr... 347 1e-93
gi|108800377|ref|YP_640574.1| hypothetical protein Mmcs_3411 [My... 346 2e-93
gi|118471745|ref|YP_888239.1| universal stress protein family pr... 344 8e-93
gi|315445921|ref|YP_004078800.1| universal stress protein UspA-l... 342 4e-92
gi|126433730|ref|YP_001069421.1| UspA domain-containing protein ... 340 2e-91
gi|145225568|ref|YP_001136246.1| UspA domain-containing protein ... 339 3e-91
gi|108798069|ref|YP_638266.1| hypothetical protein Mmcs_1097 [My... 339 4e-91
gi|120402397|ref|YP_952226.1| UspA domain-containing protein [My... 338 5e-91
gi|41407840|ref|NP_960676.1| hypothetical protein MAP1742c [Myco... 338 7e-91
gi|333990935|ref|YP_004523549.1| hypothetical protein JDM601_229... 335 4e-90
gi|254775163|ref|ZP_05216679.1| hypothetical protein MaviaA2_109... 314 8e-84
gi|41407839|ref|NP_960675.1| hypothetical protein MAP1741c [Myco... 314 1e-83
gi|118466349|ref|YP_881699.1| universal stress protein family pr... 313 2e-83
gi|240171511|ref|ZP_04750170.1| hypothetical protein MkanA1_1951... 308 8e-82
gi|296169101|ref|ZP_06850760.1| universal stress protein family ... 306 3e-81
gi|240170461|ref|ZP_04749120.1| hypothetical protein MkanA1_1420... 303 3e-80
gi|118617760|ref|YP_906092.1| hypothetical protein MUL_2234 [Myc... 302 3e-80
gi|120402426|ref|YP_952255.1| UspA domain-containing protein [My... 301 7e-80
gi|183982995|ref|YP_001851286.1| hypothetical protein MMAR_2993 ... 301 9e-80
gi|183983460|ref|YP_001851751.1| hypothetical protein MMAR_3477 ... 300 2e-79
gi|340627015|ref|YP_004745467.1| hypothetical protein MCAN_20251... 300 2e-79
gi|15609142|ref|NP_216521.1| hypothetical protein Rv2005c [Mycob... 299 3e-79
gi|342859710|ref|ZP_08716363.1| hypothetical protein MCOL_12553 ... 296 3e-78
gi|183985380|ref|YP_001853671.1| hypothetical protein MMAR_5410 ... 291 6e-77
gi|118620046|ref|YP_908378.1| hypothetical protein MUL_5033 [Myc... 286 2e-75
gi|289754743|ref|ZP_06514121.1| universal stress protein family ... 285 7e-75
gi|340627643|ref|YP_004746095.1| hypothetical protein MCAN_26681... 285 9e-75
gi|15609760|ref|NP_217139.1| hypothetical protein Rv2623 [Mycoba... 284 1e-74
gi|225698003|pdb|3CIS|A Chain A, The Crystal Structure Of Rv2623... 280 1e-73
gi|162329900|pdb|2JAX|A Chain A, Universal Stress Protein Rv2623... 277 1e-72
gi|108798076|ref|YP_638273.1| hypothetical protein Mmcs_1104 [My... 275 7e-72
gi|145224961|ref|YP_001135639.1| UspA domain-containing protein ... 273 3e-71
gi|126437925|ref|YP_001073616.1| UspA domain-containing protein ... 272 4e-71
gi|108801944|ref|YP_642141.1| hypothetical protein Mmcs_4981 [My... 271 6e-71
gi|296169051|ref|ZP_06850712.1| universal stress protein [Mycoba... 269 4e-70
gi|183982091|ref|YP_001850382.1| hypothetical protein MMAR_2077 ... 268 1e-69
gi|118618611|ref|YP_906943.1| hypothetical protein MUL_3267 [Myc... 266 2e-69
gi|240170642|ref|ZP_04749301.1| hypothetical protein MkanA1_1511... 262 6e-68
gi|240172801|ref|ZP_04751460.1| hypothetical protein MkanA1_2604... 258 1e-66
gi|240168804|ref|ZP_04747463.1| hypothetical protein MkanA1_0579... 256 2e-66
gi|323719497|gb|EGB28624.1| hypothetical protein TMMG_01271 [Myc... 256 3e-66
gi|296169227|ref|ZP_06850880.1| universal stress protein family ... 254 1e-65
>gi|15609163|ref|NP_216542.1| hypothetical protein Rv2026c [Mycobacterium tuberculosis H37Rv]
gi|15841513|ref|NP_336550.1| universal stress protein [Mycobacterium tuberculosis CDC1551]
gi|31793208|ref|NP_855701.1| hypothetical protein Mb2051c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=294
Score = 590 bits (1520), Expect = 1e-166, Method: Compositional matrix adjust.
Identities = 294/294 (100%), Positives = 294/294 (100%), Gaps = 0/294 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM
Sbjct 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG
Sbjct 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD
Sbjct 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV
Sbjct 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS
Sbjct 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
>gi|340627037|ref|YP_004745489.1| hypothetical protein MCAN_20491 [Mycobacterium canettii CIPT
140010059]
gi|340005227|emb|CCC44381.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=294
Score = 583 bits (1504), Expect = 8e-165, Method: Compositional matrix adjust.
Identities = 291/294 (99%), Positives = 292/294 (99%), Gaps = 0/294 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MSAATAKYGILVGVDGSAQSNAAVAWAARE VMRQLPITLLHIVAPVVVGWPVGQLYANM
Sbjct 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREGVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG
Sbjct 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD DAPVLVGIDGSPASEAATALAFD
Sbjct 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDFDAPVLVGIDGSPASEAATALAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV
Sbjct 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
CDKPARWLLEHSE+AQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS
Sbjct 241 CDKPARWLLEHSERAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
>gi|306793487|ref|ZP_07431789.1| hypothetical protein TMEG_01925 [Mycobacterium tuberculosis SUMu005]
gi|308338161|gb|EFP27012.1| hypothetical protein TMEG_01925 [Mycobacterium tuberculosis SUMu005]
Length=275
Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 268/268 (100%), Positives = 268/268 (100%), Gaps = 0/268 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM
Sbjct 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG
Sbjct 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD
Sbjct 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV
Sbjct 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGF 268
CDKPARWLLEHSEQAQLVVVGSHGRGGF
Sbjct 241 CDKPARWLLEHSEQAQLVVVGSHGRGGF 268
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/139 (34%), Positives = 70/139 (51%), Gaps = 9/139 (6%)
Query 161 VLVGIDGSPASEAATALAFDEASRRRVDLVALH-------AWTDLGMFPVLGMDWREREK 213
+LVG+DGS S AA A A EA R++ + LH W +G +W++
Sbjct 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWP-VGQLYANMTEWQKDNA 68
Query 214 REA-EVLAERLAGWQEQYPDVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGML 272
++ E E L + +VH LV L++ S+QA L+VVGS G G +L
Sbjct 69 QQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLL 128
Query 273 LGSVSSAVAHSVRIPVIVV 291
LGS+S+A+ H R PV ++
Sbjct 129 LGSISTALLHHARCPVAII 147
>gi|240170463|ref|ZP_04749122.1| hypothetical protein MkanA1_14215 [Mycobacterium kansasii ATCC
12478]
Length=294
Score = 439 bits (1129), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 227/294 (78%), Positives = 255/294 (87%), Gaps = 0/294 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS T +YGILVGVDGSAQS+AAVAWAAREA + Q+P+TL+H VAPVVVGWPVGQLY M
Sbjct 1 MSRDTTQYGILVGVDGSAQSDAAVAWAAREASLHQMPVTLMHGVAPVVVGWPVGQLYTEM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
EWQKD AQ VIE+AR AL SLGES+ P V TE+V+SN+VP LIDAS+ AW+ VVGSQG
Sbjct 61 PEWQKDEAQTVIERARRALDESLGESRLPDVRTEVVYSNIVPALIDASKDAWMTVVGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGR LLGS+S+ALLHHA PVA+IHS +G PD+ APVLVGIDGSPASEAATALAFD
Sbjct 121 MGALGRALLGSVSSALLHHAHGPVAVIHSDDGVAPDTSAPVLVGIDGSPASEAATALAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR VDLVALHAW+D+G+FP+LGMDWR+RE + EVLAERLAGWQEQYPDVRV RSLV
Sbjct 181 EASRRGVDLVALHAWSDVGVFPILGMDWRDRESQGEEVLAERLAGWQEQYPDVRVQRSLV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
CDKPA WLLE ++ AQLVVVGS GRGGF GMLLGSV SAVAHS +IPVIVVRP+
Sbjct 241 CDKPAHWLLEGAQHAQLVVVGSRGRGGFPGMLLGSVGSAVAHSAKIPVIVVRPA 294
>gi|296169097|ref|ZP_06850756.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896217|gb|EFG75879.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=292
Score = 406 bits (1043), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 204/292 (70%), Positives = 245/292 (84%), Gaps = 0/292 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M+ + KYG+LV VDGSA S+AAVAW REA+MR LPITL+H V PVVVGWPVGQLYA+M
Sbjct 1 MAGSAKKYGVLVCVDGSAASDAAVAWGTREAIMRDLPITLMHAVPPVVVGWPVGQLYADM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
EWQ+D+A+ VI+QAR+AL SLG++KPP+ HTE V+S +VP LI+AS AW++V GSQG
Sbjct 61 PEWQRDSARHVIDQARKALNASLGDAKPPETHTETVYSAIVPALIEASDDAWVLVTGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
+GA+GRLLLGS++ L+H+A CPVA+IHS GA PD PV++GIDGSPASEAATALAFD
Sbjct 121 LGAMGRLLLGSVTAGLVHYAHCPVAVIHSDGGAAPDPGGPVVLGIDGSPASEAATALAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRRRV LVA+H W+D+G+FP+LGMDW +REK EVL ERLAGWQE+YPDV V R L
Sbjct 181 EASRRRVGLVAVHVWSDVGVFPILGMDWHDREKEAQEVLGERLAGWQERYPDVHVERKLF 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
CDKP+ WLL+ SE+AQLVVVGS GRGGF GMLLGSVSSAVA S R+PV+VVR
Sbjct 241 CDKPSDWLLKESERAQLVVVGSRGRGGFPGMLLGSVSSAVAQSARVPVLVVR 292
>gi|118617761|ref|YP_906093.1| hypothetical protein MUL_2236 [Mycobacterium ulcerans Agy99]
gi|118569871|gb|ABL04622.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans
Agy99]
Length=294
Score = 405 bits (1041), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 207/294 (71%), Positives = 250/294 (86%), Gaps = 0/294 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ KYGILV VDGSAQS+AAV WAAREA + + PITL+H VAPVVVGWPVGQLYA M
Sbjct 1 MSSGAKKYGILVAVDGSAQSDAAVPWAAREAGLHRTPITLMHGVAPVVVGWPVGQLYAEM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
+WQ+D A V+E+AR+ L+ +LG+S+ P V TE+V+SNVV LI+AS QA ++VVGSQG
Sbjct 61 PDWQRDEANSVMERARKVLSEALGDSESPDVRTEVVYSNVVAALIEASTQASMVVVGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGR+LLGS+ +ALLHHA CPVA++HS +GA PD A V+VGIDGSPA+EAATA+AF+
Sbjct 121 MGALGRMLLGSVCSALLHHAHCPVAVVHSDSGAAPDPGAAVVVGIDGSPAAEAATAMAFE 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR VDLVALHAW+D+G+FP+LGMDWRERE + E+LAERLA WQ+QYPDV V RSLV
Sbjct 181 EASRRGVDLVALHAWSDVGVFPILGMDWRERESQGEEILAERLASWQQQYPDVHVKRSLV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
CDKPA WLLE ++ AQLV+VG+ GRGGF GMLLGSVSS VAHS ++PVIVVRP+
Sbjct 241 CDKPAHWLLEEAQHAQLVIVGNRGRGGFPGMLLGSVSSTVAHSAKVPVIVVRPA 294
>gi|183982997|ref|YP_001851288.1| hypothetical protein MMAR_2995 [Mycobacterium marinum M]
gi|183176323|gb|ACC41433.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=294
Score = 390 bits (1003), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 210/294 (72%), Positives = 252/294 (86%), Gaps = 0/294 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ KYGILV VDGSAQS+AAVAWAAREA + + PITL+H VAPVVVGWPVGQLYA M
Sbjct 1 MSSGAKKYGILVAVDGSAQSDAAVAWAAREAGLHRTPITLMHGVAPVVVGWPVGQLYAEM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
+WQ+D A V+E+AR+ L+ +LG+S+ P V TE+V+SNVV LI+AS QA ++VVGSQG
Sbjct 61 PDWQRDEANSVMERARKVLSEALGDSESPDVRTEVVYSNVVAALIEASTQASMVVVGSQG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGR+LLGS+ +ALLHHA CPVA++HS +GA PD A V+VGIDGSPA+EAATA+AF+
Sbjct 121 MGALGRMLLGSVCSALLHHAHCPVAVVHSDSGAAPDPGAAVVVGIDGSPAAEAATAMAFE 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR VDLVALHAW+D+G+FP+LGMDWRERE + E+LAERLAGWQEQYPDV V RSLV
Sbjct 181 EASRRGVDLVALHAWSDVGVFPILGMDWRERESQGEEILAERLAGWQEQYPDVHVKRSLV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
CDKPA WLLE ++ AQLV+VG+ GRGGF GMLLGSVSS VAHS ++PVIVVRP+
Sbjct 241 CDKPAHWLLEEAQHAQLVIVGNRGRGGFPGMLLGSVSSTVAHSAKVPVIVVRPA 294
>gi|118469207|ref|YP_888229.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170494|gb|ABK71390.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
Length=293
Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 169/287 (59%), Positives = 221/287 (78%), Gaps = 1/287 (0%)
Query 6 AKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQK 65
A YG++V VDGSA+S+AAV WAAREA +R++P+T++H+V P++V WPV + ++TEWQ+
Sbjct 8 AGYGMVVAVDGSAESDAAVRWAAREATLRKIPVTVMHVVEPMIVNWPVPPVQGSVTEWQE 67
Query 66 DNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALG 125
NA+ VI+ A + ++ ES P + E+ ++ +V L+D S+ A +MVVGS+G+GA G
Sbjct 68 ANARNVIKHAHDTFV-AVEESAPDGIRHEIRYAGIVAELVDVSKNATMMVVGSRGLGAFG 126
Query 126 RLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFDEASRR 185
LLGS+S+ ++HHA CPVA+IH PD +PVLVGIDGSPASE ATA AFDEASRR
Sbjct 127 GALLGSVSSGVIHHAHCPVAVIHGDQIRRPDPRSPVLVGIDGSPASEDATAFAFDEASRR 186
Query 186 RVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPA 245
RVDL+ALHAW+D+G+F LGMDW E E + E+L ERLAGW+E+YPDVRV R +VCD+PA
Sbjct 187 RVDLIALHAWSDVGVFSALGMDWHEYEDQGRELLGERLAGWRERYPDVRVTRQIVCDQPA 246
Query 246 RWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
RWL++ S AQLVVVGSHGR GF+GMLLGSV S VA + PVIVVR
Sbjct 247 RWLIDGSRHAQLVVVGSHGRAGFAGMLLGSVGSKVARAAYSPVIVVR 293
>gi|118466893|ref|YP_881698.1| universal stress protein family protein [Mycobacterium avium
104]
gi|118168180|gb|ABK69077.1| universal stress protein family protein [Mycobacterium avium
104]
Length=293
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/284 (71%), Positives = 237/284 (84%), Gaps = 0/284 (0%)
Query 9 GILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNA 68
GILV VDGSA S+AAVAWAAREA MR LPIT++H VAPVVVGWPVGQLYA+M WQ+D A
Sbjct 8 GILVCVDGSAASDAAVAWAAREAAMRGLPITVIHAVAPVVVGWPVGQLYADMPAWQQDGA 67
Query 69 QQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLL 128
QQVI+QAR+ + + G PP++ TE+++S V PTLIDAS+ AW++V GSQG+GALGRLL
Sbjct 68 QQVIDQARKIVIANQGGGTPPEMRTEIIYSAVTPTLIDASRDAWMIVAGSQGLGALGRLL 127
Query 129 LGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFDEASRRRVD 188
LGS++ ALL HA CPVA++H+ + A +DAPVLVG DGSPASEAA ALAFDEASRR V
Sbjct 128 LGSVTAALLAHAHCPVAVVHTDDHAARAADAPVLVGTDGSPASEAAIALAFDEASRRGVG 187
Query 189 LVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWL 248
+VALHAW+D+G+FP+LGMDWR+ E + E+LAERLAGWQEQYPDV V R +VCDKP+RWL
Sbjct 188 VVALHAWSDVGVFPILGMDWRDSEAKGEELLAERLAGWQEQYPDVHVKRLVVCDKPSRWL 247
Query 249 LEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
+ +E+AQLVVVGSHGRGGF GMLLGSVSS VA S PVIVVR
Sbjct 248 VAEAERAQLVVVGSHGRGGFPGMLLGSVSSHVAQSATAPVIVVR 291
>gi|108800377|ref|YP_640574.1| hypothetical protein Mmcs_3411 [Mycobacterium sp. MCS]
gi|119869506|ref|YP_939458.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|126436000|ref|YP_001071691.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|108770796|gb|ABG09518.1| UspA [Mycobacterium sp. MCS]
gi|119695595|gb|ABL92668.1| UspA domain protein [Mycobacterium sp. KMS]
gi|126235800|gb|ABN99200.1| UspA domain protein [Mycobacterium sp. JLS]
Length=298
Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/284 (64%), Positives = 222/284 (79%), Gaps = 0/284 (0%)
Query 9 GILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNA 68
GILVGVDGSA+S+AA+ WA +EAVMR+ P+TL H+VA V P+G + A + EWQ+DNA
Sbjct 7 GILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINEWQQDNA 66
Query 69 QQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLL 128
+ V+EQA + ES P +HTE++ ++VVPTL+ S ++VVG++G GALGRLL
Sbjct 67 RHVLEQALKTAQACAPESHHPDIHTEVLGASVVPTLVRESADKQMIVVGNRGTGALGRLL 126
Query 129 LGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFDEASRRRVD 188
LGS+ST L+HHA CPVA+I G +PD+DAPVL+GIDGSPASEAATA+AFDEA+RR VD
Sbjct 127 LGSVSTGLVHHAHCPVAVIRPTRGGSPDADAPVLLGIDGSPASEAATAMAFDEAARRGVD 186
Query 189 LVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWL 248
LVALHAW+D+ +FP++G WRE E + EVL ERLAGWQEQYPDVRVHR LVCD+PARWL
Sbjct 187 LVALHAWSDVAVFPIVGPAWREYESQGEEVLGERLAGWQEQYPDVRVHRRLVCDQPARWL 246
Query 249 LEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
+ SE AQLVVVG GRGGF+ LGSVSSAVA S PV+VVR
Sbjct 247 IRESEHAQLVVVGVRGRGGFASTWLGSVSSAVAQSADTPVLVVR 290
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (32%), Positives = 69/143 (49%), Gaps = 11/143 (7%)
Query 161 VLVGIDGSPASEAATALAFDEASRRRVDLVALHA----WTDLGMFPVLG--MDWREREKR 214
+LVG+DGS S+AA A EA RR L H T + P+L +W++ R
Sbjct 8 ILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINEWQQDNAR 67
Query 215 ---EAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGM 271
E + + + +PD+ H ++ L+ S Q++VVG+ G G +
Sbjct 68 HVLEQALKTAQACAPESHHPDI--HTEVLGASVVPTLVRESADKQMIVVGNRGTGALGRL 125
Query 272 LLGSVSSAVAHSVRIPVIVVRPS 294
LLGSVS+ + H PV V+RP+
Sbjct 126 LLGSVSTGLVHHAHCPVAVIRPT 148
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/146 (33%), Positives = 66/146 (46%), Gaps = 15/146 (10%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQ 69
+L+G+DGS S AA A A EA R + + LH + V V VG + +
Sbjct 159 VLLGIDGSPASEAATAMAFDEAARRGVDLVALHAWSDVAVFPIVGPAW-----------R 207
Query 70 QVIEQAREALTNSLG---ESKPP-QVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALG 125
+ Q E L L E P +VH LV LI S+ A L+VVG +G G
Sbjct 208 EYESQGEEVLGERLAGWQEQYPDVRVHRRLVCDQPARWLIRESEHAQLVVVGVRGRGGFA 267
Query 126 RLLLGSISTALLHHARCPVAIIHSGN 151
LGS+S+A+ A PV ++ +
Sbjct 268 STWLGSVSSAVAQSADTPVLVVRDAS 293
>gi|118471745|ref|YP_888239.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
gi|302595995|sp|A0QZA1.1|Y3950_MYCS2 RecName: Full=Universal stress protein MSMEG_3950; Short=USP
MSMEG_3950
gi|118173032|gb|ABK73928.1| universal stress protein family protein [Mycobacterium smegmatis
str. MC2 155]
Length=294
Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 176/293 (61%), Positives = 221/293 (76%), Gaps = 0/293 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M + +YGILVGVD SA+S+AAV WAAREA + PITL+H++APVVV WP G A +
Sbjct 1 MVQSATEYGILVGVDSSAESDAAVRWAAREASLHDAPITLMHVIAPVVVSWPAGPYMATV 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
E Q++NA+ IEQA++ + + LGE+ V TE+ +V TLIDAS+ A ++VVG++G
Sbjct 61 LECQEENARHAIEQAQKVVADCLGETHGLTVQTEIRKESVARTLIDASKSAQMVVVGNRG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
MGALGR+LLGS ST+LLH+A PV ++H + A DS PVL+GIDGSPASE AT+ AFD
Sbjct 121 MGALGRVLLGSTSTSLLHYASGPVVVVHGDDQAAHDSRLPVLLGIDGSPASEVATSHAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR VDLVALH W D+G P +G W E+E+ +LAERLAGWQE+YPDV+VHR +
Sbjct 181 EASRRGVDLVALHVWIDVGDIPPIGPTWEEQEETGRALLAERLAGWQERYPDVKVHRRVE 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRP 293
+PA WLLE ++QAQLVVVGSHGRGGF+GMLLGSVSS VA S PV+VVRP
Sbjct 241 RAQPAYWLLEEAKQAQLVVVGSHGRGGFTGMLLGSVSSRVAQSATTPVMVVRP 293
>gi|315445921|ref|YP_004078800.1| universal stress protein UspA-like protein [Mycobacterium sp.
Spyr1]
gi|315264224|gb|ADU00966.1| universal stress protein UspA-like protein [Mycobacterium sp.
Spyr1]
Length=293
Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/292 (58%), Positives = 217/292 (75%), Gaps = 0/292 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS ++ GILVGVDGS +S+AAV WAA+EAV+R+ P+TL+H+V P+VV WP+ + AN
Sbjct 1 MSDSSPDLGILVGVDGSPESHAAVRWAAQEAVLRRRPVTLMHVVTPIVVTWPIDTVVANF 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
EWQ+DNAQ+V++Q++E L ++ +S P V+ EL +VP +AS+ A L+V+GS+G
Sbjct 61 YEWQEDNAQRVLKQSQETLAAAVSDSTAPTVNVELRHDGIVPEFTEASKHADLLVLGSRG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
+G +G +LGS+S ALLHHA CP I G PVL+GIDGSPASE ATA AFD
Sbjct 121 LGPVGGAVLGSVSRALLHHAHCPTVIAKEGVVPRDAGALPVLLGIDGSPASENATAFAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR DLVALHAW+D+ +FP+LGMDW + E+ E+LAERLAGWQE+YPDV + R +V
Sbjct 181 EASRRGADLVALHAWSDVAVFPILGMDWHQYEQEGHEILAERLAGWQERYPDVHIRRRIV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
CD PARWL++ S +QLVVVGS GRGG +G+LLGSVS+ VA S PV VVR
Sbjct 241 CDTPARWLIDESRHSQLVVVGSRGRGGIAGLLLGSVSTTVAESALAPVAVVR 292
>gi|126433730|ref|YP_001069421.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|126233530|gb|ABN96930.1| UspA domain protein [Mycobacterium sp. JLS]
Length=294
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/293 (57%), Positives = 220/293 (76%), Gaps = 0/293 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS +T +YGI+VGVDGS +S A+ WAA EA P+TL+++V P+ + WP L +
Sbjct 1 MSGSTPRYGIVVGVDGSPESQVALRWAATEAQTSGRPVTLINVVTPIAISWPTIMLQEQI 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
+ ++K NA++V+ AR+ L + LG P VH+E++ + +V L++AS+ A ++VVG++G
Sbjct 61 STYEKQNAEEVLGHARQTLLDGLGPGPQPAVHSEVLMAGIVEALVEASKDAHMVVVGARG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
GA+ R+LLGS+S L+HHA CPVA+IHS +G P +DAPV+VGIDGSPASEAATALAF+
Sbjct 121 RGAVRRVLLGSVSAGLIHHAHCPVAVIHSRDGRLPTADAPVVVGIDGSPASEAATALAFE 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR +LVA+H W+D+ P D + E+R E LAERLAGWQE+YPDVR R +
Sbjct 181 EASRRGAELVAVHVWSDMAPIPGAATDRHQCEQRAEETLAERLAGWQERYPDVRTRRVVE 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRP 293
D+PARWL+EHS AQLVV+GSHGRGGF+GMLLGSVS+AVA SV +PVIVVRP
Sbjct 241 SDRPARWLVEHSADAQLVVLGSHGRGGFAGMLLGSVSAAVAQSVDVPVIVVRP 293
>gi|145225568|ref|YP_001136246.1| UspA domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|145218054|gb|ABP47458.1| UspA domain protein [Mycobacterium gilvum PYR-GCK]
Length=293
Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 165/292 (57%), Positives = 217/292 (75%), Gaps = 0/292 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS + GILVGVDGS +S+AAV WAA+EAV+R+ P+TL+H+V+P+VV WP+ + AN
Sbjct 1 MSDPSTDLGILVGVDGSPESHAAVRWAAQEAVLRRRPVTLMHVVSPIVVTWPIDTVVANF 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
EWQ+DNA +V++Q++E L ++ ++ P V E+ +VP +ASQ A L+V+GS+G
Sbjct 61 YEWQEDNAARVLKQSQETLAAAVSDTTAPTVEVEVRHDGIVPEFTEASQHADLLVLGSRG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
+G +G +LGS+S ALLHHA+CPV I G PVL+GIDGSPASE AT AFD
Sbjct 121 LGPVGGAVLGSVSRALLHHAQCPVVIAKEGVVPRDAGALPVLLGIDGSPASENATTFAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR DLVALHAW+D+ +FP+LGMDW + E++ E+LAERLAGWQE+YPDV + R +V
Sbjct 181 EASRRGADLVALHAWSDVAVFPILGMDWHQYEQQGHEILAERLAGWQERYPDVHIRRRIV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
CD PARWL++ S +QLVVVGS GRGG +G+LLGSVS+ VA S PV VVR
Sbjct 241 CDTPARWLIDESRHSQLVVVGSRGRGGIAGLLLGSVSTTVAESALAPVAVVR 292
>gi|108798069|ref|YP_638266.1| hypothetical protein Mmcs_1097 [Mycobacterium sp. MCS]
gi|119867165|ref|YP_937117.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|108768488|gb|ABG07210.1| UspA [Mycobacterium sp. MCS]
gi|119693254|gb|ABL90327.1| UspA domain protein [Mycobacterium sp. KMS]
Length=294
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/292 (57%), Positives = 219/292 (75%), Gaps = 0/292 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS +T +YGI+VGVDGS +S A+ WAA EA P+TL+++V P+ + WP L +
Sbjct 1 MSGSTPRYGIVVGVDGSPESQVALRWAATEAQTSGRPVTLINVVTPIAISWPTIMLQEQI 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
+ ++K NA++V+ AR+ L + LG P VH+E++ + +V L++AS+ A ++VVG++G
Sbjct 61 SAYEKQNAEEVLGHARQTLLDGLGPGPQPAVHSEVLMAGIVEALVEASKDAHMVVVGARG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
GA+ R+LLGS+S L+HHA CPVA+IHS +G P +DAPV+VGIDGSPASEAATALAFD
Sbjct 121 RGAVRRVLLGSVSAGLIHHAHCPVAVIHSRDGRLPTADAPVVVGIDGSPASEAATALAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR +LVA+H W+D+ P D + E+R E LAERLAGWQE+YPDVR R +
Sbjct 181 EASRRGAELVAVHVWSDMAPIPGAATDRHQCEQRAEETLAERLAGWQERYPDVRTRRVVE 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
D+PARWL+EHS AQLVV+GSHGRGGF+GMLLGSVS+AVA SV +PVIVVR
Sbjct 241 SDRPARWLVEHSADAQLVVLGSHGRGGFAGMLLGSVSAAVAQSVDVPVIVVR 292
>gi|120402397|ref|YP_952226.1| UspA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119955215|gb|ABM12220.1| UspA domain protein [Mycobacterium vanbaalenii PYR-1]
Length=293
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/292 (59%), Positives = 217/292 (75%), Gaps = 0/292 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS +++++GILVGVDGS ++++AV WA +EA +R PITL+H+VAPVVV WP+ + +
Sbjct 1 MSESSSEFGILVGVDGSPEAHSAVRWAVQEAALRHRPITLMHVVAPVVVTWPIEAVVTSF 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
EWQ+DNA+ VIEQ++E + + + PP+V E+ V DAS A LMVVGS+G
Sbjct 61 YEWQEDNAKSVIEQSQETVAAATAGAPPPEVRVEVRHGGAVTEFADASAHADLMVVGSRG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFD 180
+G +G +LGS+S ALLHHA+CPV + G P PVL+GIDGSPASE ATA AFD
Sbjct 121 LGPVGGAVLGSVSRALLHHAKCPVVVTREGVVGKPHDTLPVLLGIDGSPASENATAFAFD 180
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR V+LV LHAW+D+ +FP+LGMDW + E++ EVL ERLAGWQE+YPDV + R +V
Sbjct 181 EASRRGVELVVLHAWSDVAVFPILGMDWHQYEQQGHEVLGERLAGWQERYPDVAIRRRIV 240
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
CDKPARWL++ S QAQLVVVGS GRGG S MLLGSVS+AVA S PV VVR
Sbjct 241 CDKPARWLIDESRQAQLVVVGSRGRGGISSMLLGSVSTAVAESALAPVAVVR 292
>gi|41407840|ref|NP_960676.1| hypothetical protein MAP1742c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396194|gb|AAS04059.1| hypothetical protein MAP_1742c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=293
Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/284 (70%), Positives = 235/284 (83%), Gaps = 0/284 (0%)
Query 9 GILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNA 68
GILV V GSA S+AAVAWAAREA MR LPIT++H VAPVVVGWPVGQLYA+M WQ+D A
Sbjct 8 GILVCVHGSAASDAAVAWAAREAAMRGLPITVIHAVAPVVVGWPVGQLYADMPAWQQDGA 67
Query 69 QQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLL 128
QQVI+QAR+ + + G PP++ TE+++S V PTLIDAS+ AW++V GSQG+GALGRLL
Sbjct 68 QQVIDQARKIVIANQGGGTPPEMRTEIIYSAVTPTLIDASRDAWMIVAGSQGLGALGRLL 127
Query 129 LGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFDEASRRRVD 188
LGS++ ALL HA CPVA++H+ + A +DAPVLVG DGSPASEAA ALAFDEASRR V
Sbjct 128 LGSVTAALLAHAHCPVAVVHADDHAARAADAPVLVGTDGSPASEAAIALAFDEASRRGVG 187
Query 189 LVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWL 248
+VALHAW+D+G+FP+LGMDWR+ E + E+LAERLAGWQEQYPDV V R +VCD P+RWL
Sbjct 188 VVALHAWSDVGVFPILGMDWRDSEAKGEELLAERLAGWQEQYPDVHVKRLVVCDTPSRWL 247
Query 249 LEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
+ +E+AQLVVVGSHGRGGF GMLLGSVSS VA S PVIVVR
Sbjct 248 VAEAERAQLVVVGSHGRGGFPGMLLGSVSSHVAQSATAPVIVVR 291
>gi|333990935|ref|YP_004523549.1| hypothetical protein JDM601_2295 [Mycobacterium sp. JDM601]
gi|333486903|gb|AEF36295.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=284
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/283 (62%), Positives = 216/283 (77%), Gaps = 4/283 (1%)
Query 11 LVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQQ 70
+VGVDGSA+S+AAVAWA EA MR LP+TLLH+V P+ GWP M WQ D A+
Sbjct 1 MVGVDGSAESDAAVAWATHEAAMRNLPLTLLHVVTPLETGWPPDPRSDGMPSWQADAARG 60
Query 71 VIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLLLG 130
V+E+AR ++ S G S P+VHTE+ +S V+ TLI A++ +W+ VVGS G+GA+GRLLLG
Sbjct 61 VLERAR-SVVESRG-SAAPRVHTEIAYSQVIATLIGATKGSWMTVVGSTGLGAIGRLLLG 118
Query 131 SISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALAFDEASRRRVDLV 190
S+ST+L+HH PVA+I + DAPV+VGIDGSPASE A ALAFDEASRR V LV
Sbjct 119 SVSTSLIHHGHGPVAVIRTDRAVA--EDAPVVVGIDGSPASETAAALAFDEASRRGVPLV 176
Query 191 ALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWLLE 250
ALHAW+D+G+ P+L +D + E++ E+LAERLAG+QEQYPDV VHR +V D+PARWL+
Sbjct 177 ALHAWSDVGVMPLLNIDRSDYEEQAHEILAERLAGYQEQYPDVTVHRKVVSDQPARWLIH 236
Query 251 HSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRP 293
+EQAQLVVVGS GRGGF+ LLGSVSSAVA + IPVIVVRP
Sbjct 237 AAEQAQLVVVGSRGRGGFASQLLGSVSSAVAQAAGIPVIVVRP 279
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/142 (36%), Positives = 73/142 (52%), Gaps = 15/142 (10%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQ 69
++VG+DGS S A A A EA R +P+ LH + V V + L + ++++
Sbjct 147 VVVGIDGSPASETAAALAFDEASRRGVPLVALHAWSDVGV---MPLLNIDRSDYE----- 198
Query 70 QVIEQAREALTNSLG---ESKPP-QVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALG 125
EQA E L L E P VH ++V LI A++QA L+VVGS+G G
Sbjct 199 ---EQAHEILAERLAGYQEQYPDVTVHRKVVSDQPARWLIHAAEQAQLVVVGSRGRGGFA 255
Query 126 RLLLGSISTALLHHARCPVAII 147
LLGS+S+A+ A PV ++
Sbjct 256 SQLLGSVSSAVAQAAGIPVIVV 277
>gi|254775163|ref|ZP_05216679.1| hypothetical protein MaviaA2_10906 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=294
Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/295 (56%), Positives = 211/295 (72%), Gaps = 2/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M+A++ + G+LVGVDGS SN AV WAAR+A MR +P+TL+H+V V WP + A
Sbjct 1 MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNAATV-WPQVPMAAEA 59
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ ++V+++A + ++ + + TEL + PTL S++A L+VVGS G
Sbjct 60 VAWQEDDGRRVLQEAVKIAEDATRNGRKLAITTELWHAPPAPTLAQLSEEAELVVVGSTG 119
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATP-DSDAPVLVGIDGSPASEAATALAF 179
GA+GR+LLGS+S+ L+ ARCPVA+IH + P APVLVGIDGSPASE ATA+AF
Sbjct 120 RGAIGRVLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAF 179
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR VDL A+HAW+D +F + GMDW LAERLAGWQE+YPDV VHR +
Sbjct 180 DEASRRGVDLNAVHAWSDTQVFGLPGMDWPAVRSEAERSLAERLAGWQERYPDVTVHRMV 239
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PAR L+E SE AQL VVGSHGRGG +G LLGSVS+AV HSVR+PVIV RPS
Sbjct 240 VCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLGSVSNAVVHSVRMPVIVARPS 294
>gi|41407839|ref|NP_960675.1| hypothetical protein MAP1741c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396193|gb|AAS04058.1| hypothetical protein MAP_1741c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=294
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/295 (56%), Positives = 211/295 (72%), Gaps = 2/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M+A++ + G+LVGVDGS SN AV WAAR+A MR +P+TL+H+V V WP + A
Sbjct 1 MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNAATV-WPQVPMAAEA 59
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ ++V+++A + ++ + + TEL + PTL S++A L+VVGS G
Sbjct 60 VAWQEDDGRRVLQEAVKIAEDATRNGRKLAITTELWHAPPAPTLAQLSEEAELVVVGSTG 119
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATP-DSDAPVLVGIDGSPASEAATALAF 179
GA+GRLLLGS+S+ L+ ARCPVA+IH + P APVLVGIDGSPASE ATA+AF
Sbjct 120 RGAIGRLLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAF 179
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR VDL A+HAW+D +F + G+DW LAERLAGWQE+YPDV VHR +
Sbjct 180 DEASRRGVDLNAVHAWSDTQVFGLPGIDWPAVRSEAERSLAERLAGWQERYPDVTVHRMV 239
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PAR L+E SE AQL VVGSHGRGG +G LLGSVS+AV HSVR+PVIV RPS
Sbjct 240 VCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLGSVSNAVVHSVRMPVIVARPS 294
>gi|118466349|ref|YP_881699.1| universal stress protein family protein [Mycobacterium avium
104]
gi|118167636|gb|ABK68533.1| universal stress protein family protein [Mycobacterium avium
104]
Length=294
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/295 (56%), Positives = 211/295 (72%), Gaps = 2/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M+A++ + G+LVGVDGS SN AV WAAR+A MR +P+TL+H+V V WP + A
Sbjct 1 MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNAATV-WPQVPMAAEA 59
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ ++V+++A + ++ + + TEL + PTL S++A L+VVGS G
Sbjct 60 VAWQEDDGRRVLQEAVKIAEDATRNGRNLAITTELWHAPPAPTLAQLSEEAELVVVGSTG 119
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATP-DSDAPVLVGIDGSPASEAATALAF 179
GA+GRLLLGS+S+ L+ ARCPVA+IH + P APVLVGIDGSPASE ATA+AF
Sbjct 120 RGAIGRLLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAF 179
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEA RR VDL A+HAW+D +F + GMDW + LAERLAGWQE+YPDV VHR +
Sbjct 180 DEALRRGVDLNAVHAWSDTQVFGLPGMDWPAVRSQAERSLAERLAGWQERYPDVTVHRMV 239
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PAR L+E SE AQL VVGSHGRGG +G LLGSVS+AV HSVR+PVIV RPS
Sbjct 240 VCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLGSVSNAVVHSVRMPVIVARPS 294
>gi|240171511|ref|ZP_04750170.1| hypothetical protein MkanA1_19511 [Mycobacterium kansasii ATCC
12478]
Length=296
Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/294 (55%), Positives = 213/294 (73%), Gaps = 6/294 (2%)
Query 7 KYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKD 66
+ GI+VGVDGSA SNAAV+WAA++A +R LP+TL+H+V V WP + M WQ++
Sbjct 3 RLGIVVGVDGSAASNAAVSWAAQDATLRHLPLTLVHMVNAAVPMWPEMPMSMGMAAWQEE 62
Query 67 NAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGR 126
+ +QV+EQA + ++ + +HTEL +S VPTL++ S +A L+VVGS G GA+ R
Sbjct 63 DGRQVLEQAVKIAEQAVQAHREITIHTELRWSPPVPTLVELSAEAELVVVGSYGRGAVAR 122
Query 127 LLLGSISTALLHHARCPVAIIHSGNGATPDS------DAPVLVGIDGSPASEAATALAFD 180
+LGS+ +ALL A CPVA++ + A + APV+VGIDGSP SE ATA+AFD
Sbjct 123 AVLGSVGSALLRRATCPVAVVRDPDPAADPAHPAQLPQAPVVVGIDGSPVSELATAIAFD 182
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR V+L A+HAW+DL + + G+DW + + +AERLAGWQE+YPDV VHR +V
Sbjct 183 EASRRGVELKAVHAWSDLEVVDLPGLDWSTVKAEAEQTVAERLAGWQERYPDVTVHRLVV 242
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
CD+PAR L++ ++ AQLVV+GSHGRGGF+GMLLGSVS+AV HSVR PVIV RPS
Sbjct 243 CDRPARELIDQAQTAQLVVLGSHGRGGFTGMLLGSVSNAVVHSVRTPVIVARPS 296
>gi|296169101|ref|ZP_06850760.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896221|gb|EFG75883.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=313
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/295 (55%), Positives = 214/295 (73%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MSA ++GI+VGVDGS SNAAV WAAR+A +R +P+T++H+V +V +P L +
Sbjct 19 MSALANRHGIVVGVDGSPASNAAVCWAARDAALRHVPLTVVHMVNAMVPMYPALPLSTGV 78
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ++ +V+EQA + +++ + V +EL + VPTL++ S++A ++VVGS G
Sbjct 79 AVWQEEQGGEVLEQAVKIAADAVTTDRKIDVRSELRCAPPVPTLVEMSKEAEMVVVGSNG 138
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAF 179
GALGRLLLGS+S++++ ARCPVA++ + APVLVG+DGSPASEAA A+AF
Sbjct 139 RGALGRLLLGSVSSSVVRGARCPVAVVRDEDPLMEHPQQAPVLVGVDGSPASEAAVAVAF 198
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR V L ALHAW+D+ +F + G+DW + LAE+LAGWQE+YPDV V R +
Sbjct 199 DEASRRGVGLTALHAWSDVDVFELPGVDWSAVKAEAERSLAEQLAGWQERYPDVTVQRVV 258
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
V D+PAR L+E SE AQLVVVGSHGRGG SG+LLGSVS+AV HSVR+PVIV RPS
Sbjct 259 VSDRPARQLIEQSEAAQLVVVGSHGRGGLSGVLLGSVSNAVVHSVRMPVIVARPS 313
>gi|240170461|ref|ZP_04749120.1| hypothetical protein MkanA1_14205 [Mycobacterium kansasii ATCC
12478]
Length=295
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/295 (53%), Positives = 210/295 (72%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS + G++VG DGS SNAAV WAAR+A MR + +T++H+V+ V WP
Sbjct 1 MSILEKRLGVVVGADGSPASNAAVCWAARDAAMRNVQLTIVHVVSTDVATWPPMPYPDTW 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D ++++ A + S+ + V +E+VFS VPT+++ S +A ++VVGS G
Sbjct 61 AVWQEDEGRKILAAAHKIADESVTGERKLTVKSEIVFSTPVPTMVEMSAEAEMIVVGSSG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDS-DAPVLVGIDGSPASEAATALAF 179
GAL R+LLGS+S++L+ ARCPVAII + PD APVL+GIDGSPASEAA A+AF
Sbjct 121 RGALARVLLGSVSSSLVRRARCPVAIIRDEDPLMPDPLHAPVLLGIDGSPASEAAVAVAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR V+L+ALHAW+DL + + G++W E +LAERLAGWQE+YPDV V R +
Sbjct 181 DEASRRGVELIALHAWSDLEVVELPGLNWSAVEAEAQVLLAERLAGWQERYPDVTVRRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PAR L+E S+ AQLVVVGSHGRGG +G+LLGSVS+A+ H+VR+P+IV R S
Sbjct 241 VCDRPARQLVERSQTAQLVVVGSHGRGGVTGVLLGSVSNALVHAVRMPLIVARSS 295
>gi|118617760|ref|YP_906092.1| hypothetical protein MUL_2234 [Mycobacterium ulcerans Agy99]
gi|118569870|gb|ABL04621.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=295
Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/295 (54%), Positives = 208/295 (71%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS + G++VGVDGS SNAAV WAAR+A MR LP+T++H+V V WP
Sbjct 1 MSTLGKRLGVVVGVDGSPASNAAVCWAARDAAMRNLPLTVVHVVNTDVATWPPMPYPDTW 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D ++VI A + +S+ + + +E+VFS VPT+++ S +A LMVVGS G
Sbjct 61 AVWQEDEGRKVIAGAVKIAEDSVAGDRELTIKSEIVFSLPVPTMVEMSAEAELMVVGSSG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDS-DAPVLVGIDGSPASEAATALAF 179
GAL R+LLGS+S++L+ A CPVA+I + PD APVLVGIDGSPASE ATA+AF
Sbjct 121 HGALARVLLGSVSSSLVRRASCPVAVIRDEDPMIPDPLHAPVLVGIDGSPASELATAVAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR V+L+A+HAW+D G+ + G++W E LAERLAGW+E+YPDV V R +
Sbjct 181 DEASRRGVELIAVHAWSDQGVVELPGLNWSTMEAEARLSLAERLAGWEERYPDVTVRRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PA L+E S+ QLVVVGSHGRGG +G+LLGSVS+AV H+VR+PVIV R S
Sbjct 241 VCDEPAHQLVEMSQTVQLVVVGSHGRGGITGVLLGSVSNAVVHAVRMPVIVARSS 295
>gi|120402426|ref|YP_952255.1| UspA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119955244|gb|ABM12249.1| UspA domain protein [Mycobacterium vanbaalenii PYR-1]
Length=295
Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/295 (54%), Positives = 211/295 (72%), Gaps = 3/295 (1%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M T +YGI+VGVDGS +S+AA+ WA EA++ + P+TL++ VAP VV WP+ L +
Sbjct 1 MPGETTRYGIVVGVDGSPESSAALQWAGGEALLFREPVTLIYAVAPTVVSWPMAPLQDTV 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGES--KPPQVHTELVFSNVVPTLIDASQQAWLMVVGS 118
E ++ NA++ ++ AR A+ S+ ES + + TE+ + V L+DAS+QA ++VVG+
Sbjct 61 VECERQNAEEALQYARNAVA-SVAESCGQDIDIRTEVRYGPPVQVLVDASRQARMVVVGN 119
Query 119 QGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATALA 178
+G GALGRL LGS+S L+HHA V ++H+ G PD A VL+G+DGSPASE ATALA
Sbjct 120 RGRGALGRLALGSVSDGLIHHAHGAVTVVHTRRGHLPDPAASVLLGVDGSPASEDATALA 179
Query 179 FDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRS 238
F+EA RR VDLVA+H W D+G P+ G +WR ++ EVLAERLAGWQE++PDVRV R
Sbjct 180 FEEAERRGVDLVAVHVWGDVGGLPLQGDEWRGHRQQAEEVLAERLAGWQERHPDVRVSRH 239
Query 239 LVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRP 293
+ D PA L++ + AQLVV+GSHGRGGF+GMLLGSVSS VA SV IPV V RP
Sbjct 240 VEFDDPAHHLVDRARTAQLVVLGSHGRGGFAGMLLGSVSSTVARSVDIPVTVARP 294
>gi|183982995|ref|YP_001851286.1| hypothetical protein MMAR_2993 [Mycobacterium marinum M]
gi|183176321|gb|ACC41431.1| conserved membrane protein [Mycobacterium marinum M]
Length=295
Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 159/295 (54%), Positives = 206/295 (70%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS + G++VGVDGS SNAAV WAAR+A MR LP+T++H+V V WP
Sbjct 1 MSTLGKRLGVVVGVDGSPASNAAVCWAARDAAMRNLPLTVVHVVNTDVATWPPMPYPDTW 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D ++VI A + S+ + + +E+VFS VPT+++ S +A LMVVGS G
Sbjct 61 AVWQEDEGRKVIAGAVKIAEESVAGDRELTIKSEIVFSLPVPTMVEMSAEAELMVVGSSG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDS-DAPVLVGIDGSPASEAATALAF 179
GAL R+LLGS+S++L+ A CPVA+I + PD APVLVGIDGSPASE ATA+AF
Sbjct 121 HGALARVLLGSVSSSLVRRASCPVAVIRDEDPMIPDPLHAPVLVGIDGSPASELATAVAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR V+L+A+HAW+D + + G++W E LAERLAGW+E+YPDV V R +
Sbjct 181 DEASRRGVELIAVHAWSDQDVVELPGLNWSTMEAEARLSLAERLAGWEERYPDVTVRRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCDKPA L+E S+ QLVVVGSHGRGG +G+LLGSVS+AV H+VR+PVIV R S
Sbjct 241 VCDKPAHQLVEMSQTVQLVVVGSHGRGGITGVLLGSVSNAVVHAVRMPVIVARSS 295
>gi|183983460|ref|YP_001851751.1| hypothetical protein MMAR_3477 [Mycobacterium marinum M]
gi|183176786|gb|ACC41896.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=298
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/296 (54%), Positives = 211/296 (72%), Gaps = 4/296 (1%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MSA GI+VGVDGSA S AAV+WAAR+A +R +P+TL+H+V V WP + +M
Sbjct 1 MSAPMKHLGIVVGVDGSAASYAAVSWAARDATLRHVPLTLVHMVNQAVPMWPEMPMMTSM 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
+ WQ+++ +QV+EQA + + + Q+ +EL +S VPT ++ SQ+A L+VVGS G
Sbjct 61 SAWQEEDGRQVLEQAGKIAQEVTQQGRDTQIKSELRWSAPVPTFVELSQEADLVVVGSHG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATP---DSD-APVLVGIDGSPASEAATA 176
GA+ R LLGS+S+ ++H A CPVA+I + P D D APV+VGIDGS ASE ATA
Sbjct 121 RGAVARGLLGSVSSGVVHRAHCPVAVIRDEDPEAPQPEDRDRAPVVVGIDGSSASELATA 180
Query 177 LAFDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVH 236
+AFDEASRR V+L A+HAW+DL + + G+DW + E LAERLAGWQE+YPDV V
Sbjct 181 IAFDEASRRGVELKAVHAWSDLEVVDLPGLDWSTVKGEAEETLAERLAGWQERYPDVTVD 240
Query 237 RSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
R +VCD+PAR L++ ++ AQLVV+GSHGRGGF+ ML+GS S+AV H+V PVIV R
Sbjct 241 RVVVCDRPARQLIDQAQTAQLVVLGSHGRGGFTSMLVGSTSNAVLHAVHTPVIVAR 296
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/145 (33%), Positives = 68/145 (47%), Gaps = 17/145 (11%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPV-VVGWPVGQLYANMTEWQKDNA 68
++VG+DGS+ S A A A EA R + + +H + + VV P +W
Sbjct 165 VVVGIDGSSASELATAIAFDEASRRGVELKAVHAWSDLEVVDLP-------GLDWST--- 214
Query 69 QQVIEQAREALTNSLG--ESKPPQVHTELVFSNVVPT--LIDASQQAWLMVVGSQGMGAL 124
V +A E L L + + P V + V P LID +Q A L+V+GS G G
Sbjct 215 --VKGEAEETLAERLAGWQERYPDVTVDRVVVCDRPARQLIDQAQTAQLVVLGSHGRGGF 272
Query 125 GRLLLGSISTALLHHARCPVAIIHS 149
+L+GS S A+LH PV + S
Sbjct 273 TSMLVGSTSNAVLHAVHTPVIVARS 297
>gi|340627015|ref|YP_004745467.1| hypothetical protein MCAN_20251 [Mycobacterium canettii CIPT
140010059]
gi|340005205|emb|CCC44357.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=295
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/295 (53%), Positives = 208/295 (71%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS ++G++VGVDGS +S+AAV W A +A MR +P+T++H+V V WP
Sbjct 1 MSKPRKQHGLVVGVDGSLESDAAVCWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D +Q++ A + ++G + V +ELVFS VPT+++ S +A ++V+GS G
Sbjct 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSD-APVLVGIDGSPASEAATALAF 179
GAL R LLGS+S++L+ A CPVA+IHS PD APVLVGIDGSP SE ATA+AF
Sbjct 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDGAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR V+L+A+HAW+D+ + + G+D+ ++ LAERLAGWQE+YPDV V R +
Sbjct 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PAR L++ S AQLVVVGSHGRGG +GMLLGSVS+AV H+ R+PVIV R S
Sbjct 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
>gi|15609142|ref|NP_216521.1| hypothetical protein Rv2005c [Mycobacterium tuberculosis H37Rv]
gi|15841487|ref|NP_336524.1| universal stress protein [Mycobacterium tuberculosis CDC1551]
gi|31793185|ref|NP_855678.1| hypothetical protein Mb2028c [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=295
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/295 (52%), Positives = 208/295 (71%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS ++G++VGVDGS +S+AA W A +A MR +P+T++H+V V WP
Sbjct 1 MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVNADVATWPPMPYPETW 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D +Q++ A + ++G + V +ELVFS VPT+++ S +A ++V+GS G
Sbjct 61 GVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSD-APVLVGIDGSPASEAATALAF 179
GAL R LLGS+S++L+ A CPVA+IHS + PD APVLVGIDGSP SE ATA+AF
Sbjct 121 RGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR V+L+A+HAW+D+ + + G+D+ ++ LAERLAGWQE+YPDV V R +
Sbjct 181 DEASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
VCD+PAR L++ S AQLVVVGSHGRGG +GMLLGSVS+AV H+ R+PVIV R S
Sbjct 241 VCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
>gi|342859710|ref|ZP_08716363.1| hypothetical protein MCOL_12553 [Mycobacterium colombiense CECT
3035]
gi|342132842|gb|EGT86062.1| hypothetical protein MCOL_12553 [Mycobacterium colombiense CECT
3035]
Length=294
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/296 (54%), Positives = 213/296 (72%), Gaps = 4/296 (1%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
M+A+T ++G++VGVDGS SN AV WAAR+A +R +P+TL+H+V V WP + A
Sbjct 1 MTASTKRHGVVVGVDGSPASNFAVCWAARDAALRNVPLTLVHMVNATTV-WPQVPMAAEA 59
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ ++++++A + ++ S+ + +EL + PTL S++A ++VVGS G
Sbjct 60 LAWQEDDGRRLLQEAVKIAEDATRTSRNVDIASELWHAPPAPTLARMSEEAVMVVVGSYG 119
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATP-DSDAPVLVGIDGSPASEAATALAF 179
GA+GR LLGS+S+ ++ A CPVA+IH + P APVLVGIDGSPASE AT +AF
Sbjct 120 RGAIGRALLGSVSSGIVRRASCPVAVIHDEDPLMPYPQQAPVLVGIDGSPASELATTIAF 179
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAE-VLAERLAGWQEQYPDVRVHRS 238
DEASRR V+L A+HAW+D G+F + G+D R K EAE L+ERLAGWQE+YPDV VHR
Sbjct 180 DEASRRGVELNAVHAWSDTGIFELPGVD-RAAVKSEAERSLSERLAGWQERYPDVTVHRI 238
Query 239 LVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
+V D+PAR L+E SE AQL VVGSHGRG +G LLGSVS+AV HSVR+PVIV RPS
Sbjct 239 VVSDRPARQLVEQSETAQLTVVGSHGRGCLTGALLGSVSNAVVHSVRMPVIVARPS 294
>gi|183985380|ref|YP_001853671.1| hypothetical protein MMAR_5410 [Mycobacterium marinum M]
gi|183178706|gb|ACC43816.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=306
Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/301 (52%), Positives = 204/301 (68%), Gaps = 9/301 (2%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVV---GWPVGQLY 57
MS + I+VGVDGS S AV WAAR+A MR +P+ ++H+ AP+V GW +
Sbjct 1 MSTESTSPAIVVGVDGSPASTLAVEWAARDAEMRNVPLKVVHVFAPMVTPANGWADVAMP 60
Query 58 ANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVG 117
A+ W++D A Q+++QA ++ + V +E+ ++ +VP +++ SQQA ++VVG
Sbjct 61 ADYARWREDQAHQIVQQAHAVAVDAAAPGRAAHVTSEVRYAAIVPAMVELSQQAEMVVVG 120
Query 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDS-DAPVLVGIDGSPASEAATA 176
+G G + LLGS+S+ L HHA CPVAIIH P S APVLVG+DGSP SE AT
Sbjct 121 CRGQGGVASALLGSVSSGLAHHAHCPVAIIHDDEALPPRSAQAPVLVGVDGSPTSELATE 180
Query 177 LAFDEASRRRVDLVALHAWTDLGM--FPVLG---MDWREREKREAEVLAERLAGWQEQYP 231
+AFDEASRR +LVALHAWTD+G FP + ++W + +E EVLAERL GWQE+YP
Sbjct 181 IAFDEASRRGAELVALHAWTDMGPLDFPSINWAPIEWSNIKDQEEEVLAERLCGWQERYP 240
Query 232 DVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVV 291
DV H+ +V D+PA LLEH+ AQLVVVGSHGRGGF GMLLGSVS AV +S RIPVI+
Sbjct 241 DVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFPGMLLGSVSRAVINSARIPVIIA 300
Query 292 R 292
R
Sbjct 301 R 301
>gi|118620046|ref|YP_908378.1| hypothetical protein MUL_5033 [Mycobacterium ulcerans Agy99]
gi|118572156|gb|ABL06907.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=306
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/301 (51%), Positives = 202/301 (68%), Gaps = 9/301 (2%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVV---GWPVGQLY 57
MS + I+VGVDGS S AV WAAR+A MR +P+ ++H+ AP+V GW +
Sbjct 1 MSTESTSPAIVVGVDGSPASTLAVDWAARDAEMRNVPLKVVHVFAPMVAPANGWADVAMP 60
Query 58 ANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVG 117
A+ W++D A Q+++QA ++ + V +E+ ++ +VP +++ S QA ++VVG
Sbjct 61 ADYARWREDQAHQIVQQAHAVAVDAAAPGRAAHVTSEVRYAAIVPAMVELSLQAEMVVVG 120
Query 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDS-DAPVLVGIDGSPASEAATA 176
+G G + LLGS+S+ L HHA CPVAIIH P S APVLVG+DGSP SE AT
Sbjct 121 CRGQGGVASALLGSVSSGLAHHAHCPVAIIHDDEPLPPRSAQAPVLVGVDGSPTSELATE 180
Query 177 LAFDEASRRRVDLVALHAWTDLGM--FPVLG---MDWREREKREAEVLAERLAGWQEQYP 231
+ FDEASRR +LVALHAWTD+G FP + ++W + +E EVLAERL GWQE+YP
Sbjct 181 IGFDEASRRGAELVALHAWTDMGPLDFPSINWAPIEWSNIKDQEEEVLAERLCGWQERYP 240
Query 232 DVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVV 291
DV H+ +V D+PA LLEH+ AQLVVVGSHGRGGF GMLLGSVS AV +S RIPVI+
Sbjct 241 DVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFPGMLLGSVSRAVVNSARIPVIIA 300
Query 292 R 292
R
Sbjct 301 R 301
>gi|289754743|ref|ZP_06514121.1| universal stress protein family [Mycobacterium tuberculosis EAS054]
gi|289695330|gb|EFD62759.1| universal stress protein family [Mycobacterium tuberculosis EAS054]
Length=297
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/295 (52%), Positives = 201/295 (69%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ + GI+VG+D S + AV WAAR+A +R++P+TL+H V+P V W L +
Sbjct 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHTVSPEVATWLEVPLPPGV 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ + +I+ A + + + + PP VH+E+V + VPTL+D S+ A LMVVG G
Sbjct 61 LRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAF 179
G LLGS+S+ LL HA CPV IIH + P APVLVG+DGS ASE ATA+AF
Sbjct 121 SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR VDLVALHAW+D+ + G+DW + +VLAERLAGWQE+YP+V + R +
Sbjct 181 DEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
V D+PAR L++ SE+AQLVVVGS GRGG++GML+GSV VA R PVIV R S
Sbjct 241 VRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 295
>gi|340627643|ref|YP_004746095.1| hypothetical protein MCAN_26681 [Mycobacterium canettii CIPT
140010059]
gi|340005833|emb|CCC44999.1| conserved hypothetical protein TB31.7 [Mycobacterium canettii
CIPT 140010059]
Length=297
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/295 (52%), Positives = 202/295 (69%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ + GI+VG+D S + AV WAAR+A +R++P+TL+H V+P V W L +
Sbjct 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGV 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ +++I+ A + + + + PP VH+E+V + VPTL+D S+ A LMVVG G
Sbjct 61 LRWQQDHGRRLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAF 179
G LLGS+S+ LL HA CPV IIH + P APVLVG+DGS ASE ATA+AF
Sbjct 121 SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR VDLVALHAW+D+ + G+DW + +VLAERLAGWQE+YP+V + R +
Sbjct 181 DEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
V D+PAR L++ SE+AQLVVVGS GRGG++GML+GSV VA R PVIV R S
Sbjct 241 VRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 295
>gi|15609760|ref|NP_217139.1| hypothetical protein Rv2623 [Mycobacterium tuberculosis H37Rv]
gi|15842163|ref|NP_337200.1| universal stress protein [Mycobacterium tuberculosis CDC1551]
gi|31793809|ref|NP_856302.1| hypothetical protein Mb2656 [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=297
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/295 (52%), Positives = 201/295 (69%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ + GI+VG+D S + AV WAAR+A +R++P+TL+H V+P V W L +
Sbjct 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGV 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ + +I+ A + + + + PP VH+E+V + VPTL+D S+ A LMVVG G
Sbjct 61 LRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAF 179
G LLGS+S+ LL HA CPV IIH + P APVLVG+DGS ASE ATA+AF
Sbjct 121 SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR VDLVALHAW+D+ + G+DW + +VLAERLAGWQE+YP+V + R +
Sbjct 181 DEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
V D+PAR L++ SE+AQLVVVGS GRGG++GML+GSV VA R PVIV R S
Sbjct 241 VRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 295
>gi|225698003|pdb|3CIS|A Chain A, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698004|pdb|3CIS|B Chain B, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698005|pdb|3CIS|C Chain C, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698006|pdb|3CIS|D Chain D, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698007|pdb|3CIS|E Chain E, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698008|pdb|3CIS|F Chain F, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698009|pdb|3CIS|G Chain G, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
gi|225698010|pdb|3CIS|H Chain H, The Crystal Structure Of Rv2623 From Mycobacterium Tuberculosis
Length=309
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/291 (52%), Positives = 198/291 (69%), Gaps = 1/291 (0%)
Query 5 TAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQ 64
+ GI+VG+D S + AV WAAR+A +R++P+TL+H V+P V W L + WQ
Sbjct 17 NSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGVLRWQ 76
Query 65 KDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGAL 124
+D+ + +I+ A + + + + PP VH+E+V + VPTL+D S+ A LMVVG G G
Sbjct 77 QDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGSGRW 136
Query 125 GRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAFDEAS 183
LLGS+S+ LL HA CPV IIH + P APVLVG+DGS ASE ATA+AFDEAS
Sbjct 137 PGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAFDEAS 196
Query 184 RRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDK 243
RR VDLVALHAW+D+ + G+DW + +VLAERLAGWQE+YP+V + R +V D+
Sbjct 197 RRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVRDQ 256
Query 244 PARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
PAR L++ SE+AQLVVVGS GRGG++GML+GSV VA R PVIV R S
Sbjct 257 PARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 307
>gi|162329900|pdb|2JAX|A Chain A, Universal Stress Protein Rv2623 From Mycobaterium Tuberculosis
Length=305
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/294 (51%), Positives = 198/294 (68%), Gaps = 1/294 (0%)
Query 2 SAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMT 61
S+ + GI+VG+D S + AV WAAR+A +R++P+TL+H V+P V W L +
Sbjct 2 SSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGVL 61
Query 62 EWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGM 121
WQ+D+ + +I+ A + + + + PP VH+E+V + VPTL+D S+ A L VVG G
Sbjct 62 RWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDXSKDAVLXVVGCLGS 121
Query 122 GALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAFD 180
G LLGS+S+ LL HA CPV IIH + P APVLVG+DGS ASE ATA+AFD
Sbjct 122 GRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVXPHPQQAPVLVGVDGSSASELATAIAFD 181
Query 181 EASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
EASRR VDLVALHAW+D+ + G+DW + +VLAERLAGWQE+YP+V + R +V
Sbjct 182 EASRRNVDLVALHAWSDVDVSEWPGIDWPATQSXAEQVLAERLAGWQERYPNVAITRVVV 241
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
D+PAR L++ SE+AQLVVVGS GRGG++G L+GSV VA R PVIV R S
Sbjct 242 RDQPARQLVQRSEEAQLVVVGSRGRGGYAGXLVGSVGETVAQLARTPVIVARES 295
>gi|108798076|ref|YP_638273.1| hypothetical protein Mmcs_1104 [Mycobacterium sp. MCS]
gi|119867172|ref|YP_937124.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|126433736|ref|YP_001069427.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|108768495|gb|ABG07217.1| UspA [Mycobacterium sp. MCS]
gi|119693261|gb|ABL90334.1| UspA domain protein [Mycobacterium sp. KMS]
gi|126233536|gb|ABN96936.1| UspA domain protein [Mycobacterium sp. JLS]
Length=295
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 153/298 (52%), Positives = 201/298 (68%), Gaps = 14/298 (4%)
Query 5 TAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVG-W----PVGQLYAN 59
+A GI+VGVDGS Q AV WAAREA R +P+TL+H++ V W P + +
Sbjct 4 SANQGIVVGVDGSPQGMRAVTWAAREAAGRDVPLTLVHVLPDTEVRMWLDVPPTDEFWRT 63
Query 60 MTEWQKDNAQQVIEQAREAL--TNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVG 117
+ ++ + ++ A A+ T SL V V N VPTL+D S+ A ++VVG
Sbjct 64 VEHQNREIQSEAVKTAEAAVAGTGSL------TVRQRSVSGNAVPTLVDLSKDAEMVVVG 117
Query 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSD-APVLVGIDGSPASEAATA 176
S+G+GA+G+ +LGS+S L+HHA CPVA+IH P+ D APV+VGIDGSPASE ATA
Sbjct 118 SRGLGAIGQRILGSVSRGLVHHAHCPVAVIHDDEPDAPERDRAPVVVGIDGSPASELATA 177
Query 177 LAFDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVH 236
+AFD+ASRR+V+L+A+HAW+D ++ +W + + EVLAERLAGW ++YPDV V
Sbjct 178 IAFDQASRRKVELIAVHAWSDPTIYAFPNEEWMTFKPQADEVLAERLAGWADRYPDVPVQ 237
Query 237 RSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
R +V DK LLE SE AQLVVVGSHGRGGF+GMLLGSVSSAVA + R+PVIV R S
Sbjct 238 RVVVRDKAVHQLLEQSEHAQLVVVGSHGRGGFAGMLLGSVSSAVAQAARVPVIVARQS 295
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/146 (30%), Positives = 66/146 (46%), Gaps = 8/146 (5%)
Query 154 TPDSDAPVLVGIDGSPASEAATALAFDEASRRRVDLVALHAWTDLGM-----FPVLGMDW 208
T ++ ++VG+DGSP A A EA+ R V L +H D + P W
Sbjct 2 TTSANQGIVVGVDGSPQGMRAVTWAAREAAGRDVPLTLVHVLPDTEVRMWLDVPPTDEFW 61
Query 209 REREKREAEVLAERLAGWQEQYP---DVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHGR 265
R E + E+ +E + + + V + V L++ S+ A++VVVGS G
Sbjct 62 RTVEHQNREIQSEAVKTAEAAVAGTGSLTVRQRSVSGNAVPTLVDLSKDAEMVVVGSRGL 121
Query 266 GGFSGMLLGSVSSAVAHSVRIPVIVV 291
G +LGSVS + H PV V+
Sbjct 122 GAIGQRILGSVSRGLVHHAHCPVAVI 147
>gi|145224961|ref|YP_001135639.1| UspA domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|315445292|ref|YP_004078171.1| universal stress protein UspA-like protein [Mycobacterium sp.
Spyr1]
gi|145217447|gb|ABP46851.1| UspA domain protein [Mycobacterium gilvum PYR-GCK]
gi|315263595|gb|ADU00337.1| universal stress protein UspA-like protein [Mycobacterium sp.
Spyr1]
Length=295
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/294 (53%), Positives = 202/294 (69%), Gaps = 3/294 (1%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVV-GWPVGQLYAN 59
MS A GI+VGVDGSA S AV WAAR+A +RQ+P+TL +++ V W L A+
Sbjct 1 MSTQPAPLGIVVGVDGSAASRVAVDWAARDAALRQVPLTLAYVLPGAAVQSWIQVPLPAS 60
Query 60 MTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQ 119
E +K A +V+ AR + + P V +++ VPTL D S+ A ++VVGS+
Sbjct 61 FYEDEKAEATRVLADARAVVDAATQAHPLPAVTEKVLSGQPVPTLADLSRDADMIVVGSR 120
Query 120 GMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALA 178
GMG R +LGS+S+ L+HHARCPVA+I+ + P + APV+VGIDGSPASE ATA+A
Sbjct 121 GMGKWERRVLGSVSSGLVHHARCPVAVIYDEDPLIPHPAQAPVVVGIDGSPASERATAIA 180
Query 179 FDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRS 238
FDEA RR VDLVA+H W+D G + + G++W E + E +L+ERLAGW E+YPDV VHR
Sbjct 181 FDEACRRGVDLVAVHTWSDAG-YELPGVEWTEVQPEEEMLLSERLAGWHERYPDVTVHRV 239
Query 239 LVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
+ D+PAR LLE +E+AQL+VVGSHGRGGF+GMLLGSV S + S R PVIV R
Sbjct 240 VRRDQPARRLLEEAEKAQLLVVGSHGRGGFTGMLLGSVGSQIVQSSRTPVIVAR 293
>gi|126437925|ref|YP_001073616.1| UspA domain-containing protein [Mycobacterium sp. JLS]
gi|126237725|gb|ABO01126.1| UspA domain protein [Mycobacterium sp. JLS]
Length=341
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/295 (51%), Positives = 203/295 (69%), Gaps = 6/295 (2%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVA---PVVVGWPVGQLY 57
MSA+ K GILVGVDGSA S+ AV WA REAVMRQ +T++ + P++V + ++
Sbjct 27 MSASPDKSGILVGVDGSAFSDVAVRWAVREAVMRQEELTVMAVAQRHMPLLVTYDNEKIL 86
Query 58 ANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVG 117
N + Q QV+ A + + LGES+P +V +F++ + LI+AS++ L+VVG
Sbjct 87 -NSRQSQHSEIDQVLADACRIVDDMLGESRPVRVEIAFMFAHPLGGLIEASEEMRLVVVG 145
Query 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATAL 177
+GMGA RL LGS+S+ L+ HA CPVA+IH A D+ AP+L+GIDGSPASE+ATA+
Sbjct 146 CRGMGAWDRLTLGSVSSGLVRHAHCPVAVIHKERPAL-DAHAPILLGIDGSPASESATAM 204
Query 178 AFDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHR 237
AF+EAS R L+A+HAW D M +D +++ AE+L+ERLAGWQE YPDV+V
Sbjct 205 AFEEASLRGAPLIAVHAWADHSM-SAADLDGAMDQQKGAEILSERLAGWQEDYPDVQVKP 263
Query 238 SLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
+L+ RWL+ HS+ AQL+VVGSHGRGGF+GMLLGSVSS V H+ +PVIV R
Sbjct 264 TLIDQDAGRWLVNHSDTAQLIVVGSHGRGGFAGMLLGSVSSTVVHAAEVPVIVAR 318
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQ 69
IL+G+DGS S +A A A EA +R P+ +H W + A + D Q
Sbjct 188 ILLGIDGSPASESATAMAFEEASLRGAPLIAVH-------AWADHSMSAADLDGAMDQ-Q 239
Query 70 QVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLLL 129
+ E E L + QV L+ + L++ S A L+VVGS G G +LL
Sbjct 240 KGAEILSERLAGWQEDYPDVQVKPTLIDQDAGRWLVNHSDTAQLIVVGSHGRGGFAGMLL 299
Query 130 GSISTALLHHARCPVAIIHSGNGATPDSDA 159
GS+S+ ++H A PV + + +G T SD+
Sbjct 300 GSVSSTVVHAAEVPVIVARTPDGPTQPSDS 329
>gi|108801944|ref|YP_642141.1| hypothetical protein Mmcs_4981 [Mycobacterium sp. MCS]
gi|119871096|ref|YP_941048.1| UspA domain-containing protein [Mycobacterium sp. KMS]
gi|108772363|gb|ABG11085.1| UspA [Mycobacterium sp. MCS]
gi|119697185|gb|ABL94258.1| UspA domain protein [Mycobacterium sp. KMS]
Length=341
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/295 (51%), Positives = 203/295 (69%), Gaps = 6/295 (2%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVA---PVVVGWPVGQLY 57
MSA+ K GILVGVDGSA S+ AV WA REAVMRQ +T++ + P++V + ++
Sbjct 27 MSASPDKSGILVGVDGSAFSDVAVRWAVREAVMRQEELTVMAVAQRHMPLLVTYDNEKIL 86
Query 58 ANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVG 117
N + Q QV+ A + + LGES+P +V +F++ + LI+AS++ L+VVG
Sbjct 87 -NSRQSQHSEIDQVLADACRIVDDMLGESRPVRVEIAFMFAHPLGGLIEASEEMRLVVVG 145
Query 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATAL 177
+GMGA RL LGS+S+ L+ HA CPVA+IH A D+ AP+L+GIDGSPASE+ATA+
Sbjct 146 CRGMGAWDRLTLGSVSSGLVRHAHCPVAVIHKERPAL-DAHAPILLGIDGSPASESATAM 204
Query 178 AFDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHR 237
AF+EAS R L+A+HAW D M +D +++ AE+L+ERLAGWQE YPDV+V
Sbjct 205 AFEEASLRGAPLIAVHAWADHSM-SAADLDGAMDQQKGAEILSERLAGWQEDYPDVQVKP 263
Query 238 SLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
+L+ RW++ HS+ AQL+VVGSHGRGGF+GMLLGSVSS V H+ +PVIV R
Sbjct 264 TLIDQDAGRWMVNHSDTAQLIVVGSHGRGGFAGMLLGSVSSTVVHAAEVPVIVAR 318
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (31%), Positives = 71/150 (48%), Gaps = 8/150 (5%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQ 69
IL+G+DGS S +A A A EA +R P+ +H W + A + D Q
Sbjct 188 ILLGIDGSPASESATAMAFEEASLRGAPLIAVH-------AWADHSMSAADLDGAMDQ-Q 239
Query 70 QVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLLL 129
+ E E L + QV L+ + +++ S A L+VVGS G G +LL
Sbjct 240 KGAEILSERLAGWQEDYPDVQVKPTLIDQDAGRWMVNHSDTAQLIVVGSHGRGGFAGMLL 299
Query 130 GSISTALLHHARCPVAIIHSGNGATPDSDA 159
GS+S+ ++H A PV + + G T S++
Sbjct 300 GSVSSTVVHAAEVPVIVARTPVGPTQPSNS 329
>gi|296169051|ref|ZP_06850712.1| universal stress protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896279|gb|EFG75939.1| universal stress protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=295
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/297 (54%), Positives = 207/297 (70%), Gaps = 5/297 (1%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVG---WPVGQLY 57
MS GI+VGVD SA S AAVAWAAR+A +R +P+TL+H++APVV WP +
Sbjct 1 MSERETHRGIMVGVDRSASSMAAVAWAARDAAIRNVPLTLMHVIAPVVPAVAPWPAIPIP 60
Query 58 ANMTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVG 117
+ E Q + A+Q++E AR+ + +S + PP V++ +V V TL++ S+ A +MVVG
Sbjct 61 QDYFERQDEKARQILEDARQVVADSTADHGPPFVYSVVVRGPTVSTLVNESKIADMMVVG 120
Query 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGSPASEAATAL 177
+G GA R+ GS ST L+++A CPVA++H + A P APVLVGIDGS AS+ +
Sbjct 121 YRGEGAFSRVPFGSASTGLVNYAHCPVAVVH--DEAPPRPQAPVLVGIDGSAASKRVAEI 178
Query 178 AFDEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHR 237
AF+EASRR V+LVALHAW+D+ + V G+D E R E LAE LAG QE+YPDV V
Sbjct 179 AFEEASRRGVELVALHAWSDVSVSEVPGLDLEMMEVRARESLAEWLAGLQERYPDVGVRP 238
Query 238 SLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
+VCD+PAR L+EHSE AQLVVVGSHGRGGF+GMLLGSVS+AVAH+ + VIV R S
Sbjct 239 VVVCDQPARQLIEHSESAQLVVVGSHGRGGFAGMLLGSVSTAVAHAAQSVVIVSRES 295
>gi|183982091|ref|YP_001850382.1| hypothetical protein MMAR_2077 [Mycobacterium marinum M]
gi|183175417|gb|ACC40527.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=297
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/295 (49%), Positives = 193/295 (66%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ + GI+VG+D S + A+ WA REA +R P+TL+H ++P V W L +
Sbjct 1 MSSQNQRLGIIVGIDDSPAAKEAIQWATREAELRNAPLTLVHAISPDVATWLNKPLPPGL 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ Q++E A + + + P + +E+V S VP L+D S+ A ++V G G
Sbjct 61 ARWQRDHGHQLVEDALKVIEEAAERGGPAGLGSEIVPSAAVPALVDMSKDAEMVVTGCHG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAF 179
G LGS+S+ LL +A CPVAI+H + + PD + APVLVGIDGS ASE AT LAF
Sbjct 121 SGRWPGRPLGSVSSGLLRYAHCPVAIVHDEDASAPDRAAAPVLVGIDGSRASEFATGLAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR LVA H+W+D+ + G+DW + +VLAERLAGWQEQYPDV V R +
Sbjct 181 DEASRRHTGLVAAHSWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQEQYPDVSVSRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
D+PAR L++ S +AQLVVVGS GRGGF+GM++GSV+ +VA R+PVIV R S
Sbjct 241 ARDQPARQLVQRSGEAQLVVVGSRGRGGFAGMVVGSVAESVAQLARVPVIVARES 295
>gi|118618611|ref|YP_906943.1| hypothetical protein MUL_3267 [Mycobacterium ulcerans Agy99]
gi|118570721|gb|ABL05472.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=297
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/295 (48%), Positives = 192/295 (66%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ + GI+VG+D S + A+ WA REA +R P+TL+H ++P V W L +
Sbjct 1 MSSQNQRLGIIVGIDDSPAAKVAIQWATREAELRNAPLTLVHAISPDVATWLNKPLPPGL 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D+ Q++E A + + + P + +E+V VP L+D S+ A ++V G G
Sbjct 61 ARWQRDHGHQLVEDALKVIEEAAERGGPAGLGSEIVPPAAVPALVDMSKDAEMVVTGCHG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGNGATPD-SDAPVLVGIDGSPASEAATALAF 179
G LGS+S+ LL +A CPVAI+H + + PD + APVLVGIDGS ASE AT LAF
Sbjct 121 SGRWPDRPLGSVSSGLLRYAHCPVAIVHDEDASAPDRAAAPVLVGIDGSRASEFATGLAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEASRR LVA H+W+D+ + G+DW + +VLAERLAGWQEQYPDV V R +
Sbjct 181 DEASRRHTGLVAAHSWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQEQYPDVSVSRVV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
D+PAR L++ S +AQLVVVGS GRGGF+GM++GSV+ +VA R+PVIV R S
Sbjct 241 ARDQPARQLVQRSGEAQLVVVGSRGRGGFAGMVVGSVAESVAQLARVPVIVARES 295
>gi|240170642|ref|ZP_04749301.1| hypothetical protein MkanA1_15110 [Mycobacterium kansasii ATCC
12478]
Length=297
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/295 (50%), Positives = 194/295 (66%), Gaps = 1/295 (0%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ A GI+VG+D S + AV WAA +A +R +P+TL+H V+P V + A +
Sbjct 1 MSSRNAPLGIVVGIDESPSARLAVQWAAHDAELRNIPLTLVHAVSPEVSSRLKMPMPAGL 60
Query 61 TEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQG 120
WQ+D ++++++A + + + P VHTE++ S VP L+D S+ A ++V G G
Sbjct 61 ARWQQDRGRRLVDEALKVVDEAAQGGGPAGVHTEILGSPAVPALVDLSKDAEMVVTGCLG 120
Query 121 MGALGRLLLGSISTALLHHARCPVAIIHSGN-GATPDSDAPVLVGIDGSPASEAATALAF 179
G LGS+S+A+L +A CPV I+H + A APVLVGIDGS ASE ATA AF
Sbjct 121 SGRWPGRQLGSVSSAVLRYAHCPVVIVHDEDPSAAQRGQAPVLVGIDGSSASELATAFAF 180
Query 180 DEASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSL 239
DEA+RRRV LV LHAW+D+ + G+DW + +VLAERLAGWQEQYPDV V R +
Sbjct 181 DEAARRRVGLVGLHAWSDIDVSEWPGIDWPATQSMAEQVLAERLAGWQEQYPDVAVTRIV 240
Query 240 VCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
V D+PAR L++ S QAQLVVVGS GRGGF+GM +GSV AVA ++PVIV R S
Sbjct 241 VQDQPARQLVDKSGQAQLVVVGSRGRGGFAGMSVGSVGEAVAQLAQVPVIVARES 295
>gi|240172801|ref|ZP_04751460.1| hypothetical protein MkanA1_26047 [Mycobacterium kansasii ATCC
12478]
Length=304
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/312 (51%), Positives = 201/312 (65%), Gaps = 30/312 (9%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANM 60
MS+ GI+VGVDGS SNAA WA REA MR L +TL+H APV G P +
Sbjct 1 MSSEITDPGIVVGVDGSTFSNAAARWAVREATMRNLAVTLVHAAAPVPGGSP-------L 53
Query 61 TEWQKDN-----AQQVIEQAREALTNSL-------GESKPPQVHTELVFSNVVPTLIDAS 108
EW D QQ+ AR L +++ G+ +P ++++EL VP L+D S
Sbjct 54 LEWSGDPIPDELMQQLDGSARRVLADTIKLVENITGDRRP-RINSELTSLAPVPALVDLS 112
Query 109 QQAWLMVVGSQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSDAPVLVGIDGS 168
+A ++VVGS+G G + R+LLGS+ST L+HHA CPVA+IH N + PVLVGIDGS
Sbjct 113 TKADMVVVGSRGQGTVKRMLLGSVSTGLVHHAHCPVAVIH--NDIPAPREGPVLVGIDGS 170
Query 169 PASEAATALAFDEASRRRVDLVALHAWTDLGM--------FPVLGMDWREREKREAEVLA 220
PASE ATA+AF+EAS R +LVALHAWTD + + W + E LA
Sbjct 171 PASERATAIAFEEASWRGAELVALHAWTDAEVPGTPSREWTGLTRTSWSTLQSEADETLA 230
Query 221 ERLAGWQEQYPDVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAV 280
ERLAGW+++YPDV V R +V ++PA+ L+E SE AQLVVVGSHGRGGF+GMLLGSVS+AV
Sbjct 231 ERLAGWRDRYPDVDVERVVVVNRPAQHLVERSESAQLVVVGSHGRGGFAGMLLGSVSTAV 290
Query 281 AHSVRIPVIVVR 292
H+VR PVIV R
Sbjct 291 VHAVRTPVIVAR 302
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/145 (34%), Positives = 66/145 (46%), Gaps = 7/145 (4%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQ 69
+LVG+DGS S A A A EA R + LH V + + +T Q
Sbjct 163 VLVGIDGSPASERATAIAFEEASWRGAELVALHAWTDAEVPGTPSREWTGLTRTSWSTLQ 222
Query 70 QVIEQAREALTNSLG--ESKPPQVHTELVFSNVVPT--LIDASQQAWLMVVGSQGMGALG 125
+A E L L + P V E V P L++ S+ A L+VVGS G G
Sbjct 223 S---EADETLAERLAGWRDRYPDVDVERVVVVNRPAQHLVERSESAQLVVVGSHGRGGFA 279
Query 126 RLLLGSISTALLHHARCPVAIIHSG 150
+LLGS+STA++H R PV + G
Sbjct 280 GMLLGSVSTAVVHAVRTPVIVARGG 304
>gi|240168804|ref|ZP_04747463.1| hypothetical protein MkanA1_05795 [Mycobacterium kansasii ATCC
12478]
Length=273
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/268 (52%), Positives = 189/268 (71%), Gaps = 8/268 (2%)
Query 33 MRQLPITLLHIVAPVVV--GWPVGQLYANMTEWQKDNAQQVIEQAREALTNSLGESKPPQ 90
MR +PI L+H++AP+ GW + AN +WQ++ A+++IEQA + + + S+ P
Sbjct 1 MRNVPIHLVHVIAPMATSEGWSGLPIIANYADWQEERAREIIEQAGKVVAEATSTSRAPH 60
Query 91 VHTELVFSNVVPTLIDASQQAWLMVVGSQGMGALGRLLLGSISTALLHHARCPVAIIHSG 150
V +E++ + +VP L+D S+ A ++VVG +G + LLGS+S+ L HHA CPVA+IH
Sbjct 61 VTSEVLHAAIVPALVDLSKSADMVVVGCRGHDGVAGALLGSVSSGLAHHAHCPVAVIHDE 120
Query 151 NGATPDS-DAPVLVGIDGSPASEAATALAFDEASRRRVDLVALHAWTDLGM--FPVLG-- 205
+ S A V+VGIDGSP SE AT +AFDEASRR V+LVALHAW+D+G FP
Sbjct 121 DVLEARSPQAAVVVGIDGSPTSELATDIAFDEASRRGVELVALHAWSDMGPLDFPSTNWA 180
Query 206 -MDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWLLEHSEQAQLVVVGSHG 264
++WR E +E EVLAERL+GWQE+YPDV V + +VCD+PA LLE ++ AQL+VVGSHG
Sbjct 181 PIEWRNIEDQEKEVLAERLSGWQERYPDVVVRKVVVCDRPAPRLLEQAKTAQLLVVGSHG 240
Query 265 RGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
RGGF GMLLGSVS AV +S +IPVI+ R
Sbjct 241 RGGFPGMLLGSVSRAVVNSAQIPVIIAR 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/151 (32%), Positives = 74/151 (50%), Gaps = 12/151 (7%)
Query 1 MSAATAKYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWP-VGQLYAN 59
+ A + + ++VG+DGS S A A EA R + + LH W +G L
Sbjct 123 LEARSPQAAVVVGIDGSPTSELATDIAFDEASRRGVELVALH-------AWSDMGPLDFP 175
Query 60 MTEWQKDNAQQVIEQAREALTNSLG---ESKPPQVHTELVFSN-VVPTLIDASQQAWLMV 115
T W + + +Q +E L L E P V ++V + P L++ ++ A L+V
Sbjct 176 STNWAPIEWRNIEDQEKEVLAERLSGWQERYPDVVVRKVVVCDRPAPRLLEQAKTAQLLV 235
Query 116 VGSQGMGALGRLLLGSISTALLHHARCPVAI 146
VGS G G +LLGS+S A+++ A+ PV I
Sbjct 236 VGSHGRGGFPGMLLGSVSRAVVNSAQIPVII 266
>gi|323719497|gb|EGB28624.1| hypothetical protein TMMG_01271 [Mycobacterium tuberculosis CDC1551A]
Length=242
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/233 (56%), Positives = 172/233 (74%), Gaps = 1/233 (0%)
Query 63 WQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMG 122
WQ+D +Q++ A + ++G + V +ELVFS VPT+++ S +A ++V+GS G G
Sbjct 10 WQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEISNEAEMVVLGSSGRG 69
Query 123 ALGRLLLGSISTALLHHARCPVAIIHSGNGATPDSD-APVLVGIDGSPASEAATALAFDE 181
AL R LLGS+S++L+ A CPVA+IHS + PD APVLVGIDGSP SE ATA+AFDE
Sbjct 70 ALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDE 129
Query 182 ASRRRVDLVALHAWTDLGMFPVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLVC 241
ASRR V+L+A+HAW+D+ + + G+D+ ++ LAERLAGWQE+YPDV V R +VC
Sbjct 130 ASRRGVELIAVHAWSDVEVVELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRVVVC 189
Query 242 DKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
D+PAR L++ S AQLVVVGSHGRGG +GMLLGSVS+AV H+ R+PVIV R S
Sbjct 190 DRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 242
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/141 (34%), Positives = 66/141 (47%), Gaps = 15/141 (10%)
Query 10 ILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKDNAQ 69
+LVG+DGS S A A A EA R + + +H + V + E +
Sbjct 109 VLVGIDGSPVSELATAVAFDEASRRGVELIAVHAWSDV-----------EVVELPGLDFS 157
Query 70 QVIEQAREALTNSLG--ESKPPQVHTELVFSNVVP--TLIDASQQAWLMVVGSQGMGALG 125
V ++A +L L + + P V V P L+ S A L+VVGS G G L
Sbjct 158 AVQQEAELSLAERLAGWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLT 217
Query 126 RLLLGSISTALLHHARCPVAI 146
+LLGS+S A+LH AR PV +
Sbjct 218 GMLLGSVSNAVLHAARVPVIV 238
>gi|296169227|ref|ZP_06850880.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896125|gb|EFG75792.1| universal stress protein family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=305
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/294 (51%), Positives = 192/294 (66%), Gaps = 6/294 (2%)
Query 7 KYGILVGVDGSAQSNAAVAWAAREAVMRQLPITLLHIVAPVVVGWPVGQLYANMTEWQKD 66
+ +LVGVDGS + AV WAAR A +R P+ L+H+V + GW A +EWQ
Sbjct 6 RNAVLVGVDGSKAALGAVRWAARNAALRNAPLALVHVVDAPMPGWFQVTALAEFSEWQDR 65
Query 67 NAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWLMVVGSQGMGAL-G 125
A++ +E A S GE P + E+V+S VPTL+D S++ L+VVG +G G +
Sbjct 66 RAREFVELAVRVAEESAGEGGPGHIEGEVVYSATVPTLVDLSKEVELVVVGHRGHGGVSA 125
Query 126 RLLLGSISTALLHHARCPVAIIHSGNG-ATPDSDAPVLVGIDGSPASEAATALAFDEASR 184
R +LGS+S+AL++HA CPVA+I G A + APVLVGIDGSPASE ATA+AFDEASR
Sbjct 126 RGVLGSVSSALVYHAHCPVAVIRDGQEPARNAARAPVLVGIDGSPASELATAIAFDEASR 185
Query 185 RRVDLVALHAWTDLGMF----PVLGMDWREREKREAEVLAERLAGWQEQYPDVRVHRSLV 240
R V +VALHAW DL + P +W + E E LAERLAGWQ +Y DV +HR +
Sbjct 186 RGVGVVALHAWMDLRVADVKEPFQDGNWDAQLSEEEETLAERLAGWQGRYRDVDIHRRIE 245
Query 241 CDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVRPS 294
PARWL+E SE+AQLVVVG+HGRG +G LLGSV +AV + +PVIV RPS
Sbjct 246 IGDPARWLVEASERAQLVVVGNHGRGRLAGRLLGSVGAAVVNRAEVPVIVARPS 299
Lambda K H
0.318 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 486436626624
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40