BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2034
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
gi|289574713|ref|ZP_06454940.1| ArsR family transcriptional regu... 213 8e-54
gi|15841522|ref|NP_336559.1| ArsR family transcriptional regulat... 213 9e-54
gi|289554182|ref|ZP_06443392.1| arsR-type repressor protein [Myc... 212 1e-53
gi|15609171|ref|NP_216550.1| ArsR-type repressor protein [Mycoba... 211 2e-53
gi|240170473|ref|ZP_04749132.1| ArsR-type repressor protein [Myc... 172 2e-41
gi|296166920|ref|ZP_06849337.1| ArsR family transcriptional regu... 161 3e-38
gi|254822494|ref|ZP_05227495.1| ArsR-type repressor protein [Myc... 160 7e-38
gi|213864635|ref|ZP_03386754.1| ArsR-type repressor protein [Sal... 155 2e-36
gi|126436107|ref|YP_001071798.1| ArsR family transcriptional reg... 138 2e-31
gi|108800491|ref|YP_640688.1| ArsR family transcriptional regula... 138 3e-31
gi|119869630|ref|YP_939582.1| ArsR family transcriptional regula... 137 7e-31
gi|120406449|ref|YP_956278.1| regulatory protein ArsR [Mycobacte... 135 2e-30
gi|302865223|ref|YP_003833860.1| regulatory protein ArsR [Microm... 117 4e-25
gi|315501768|ref|YP_004080655.1| ArsR family transcriptional reg... 117 4e-25
gi|317123737|ref|YP_004097849.1| ArsR transcriptional regulator ... 114 4e-24
gi|300784590|ref|YP_003764881.1| ArsR family transcriptional reg... 112 2e-23
gi|312196876|ref|YP_004016937.1| regulatory protein ArsR [Franki... 112 3e-23
gi|15965744|ref|NP_386097.1| putative transcription regulator pr... 105 2e-21
gi|319777997|ref|YP_004134427.1| regulatory protein arsr [Mesorh... 103 9e-21
gi|337268968|ref|YP_004613023.1| ArsR family transcriptional reg... 101 3e-20
gi|126725842|ref|ZP_01741684.1| putative transcription regulator... 99.4 2e-19
gi|326334010|ref|ZP_08200239.1| toxin-antitoxin system, antitoxi... 99.0 2e-19
gi|255264143|ref|ZP_05343485.1| transcriptional regulator, ArsR ... 99.0 2e-19
gi|229822405|ref|YP_002883931.1| ArsR family transcriptional reg... 97.4 6e-19
gi|331698118|ref|YP_004334357.1| ArsR family transcriptional reg... 94.4 5e-18
gi|146339923|ref|YP_001204971.1| Ars family transcriptional regu... 91.3 4e-17
gi|110636384|ref|YP_676592.1| ArsR family transcriptional regula... 91.3 4e-17
gi|54024267|ref|YP_118509.1| putative transcriptional regulator ... 89.4 2e-16
gi|334336302|ref|YP_004541454.1| regulatory protein ArsR [Isopte... 89.0 2e-16
gi|316932262|ref|YP_004107244.1| regulatory protein ArsR [Rhodop... 88.2 3e-16
gi|54025079|ref|YP_119321.1| putative transcriptional regulator ... 87.4 6e-16
gi|319781113|ref|YP_004140589.1| ArsR family transcription regul... 85.9 2e-15
gi|148256558|ref|YP_001241143.1| ArsR family transcriptional reg... 85.1 3e-15
gi|317122571|ref|YP_004102574.1| ArsR family transcriptional reg... 83.6 9e-15
gi|154253112|ref|YP_001413936.1| regulatory protein ArsR [Parvib... 82.8 2e-14
gi|220919006|ref|YP_002494310.1| ArsR family transcriptional reg... 82.4 2e-14
gi|13473237|ref|NP_104804.1| transcriptional regulator [Mesorhiz... 81.6 4e-14
gi|89070382|ref|ZP_01157689.1| transcriptional regulator [Oceani... 81.3 5e-14
gi|337265922|ref|YP_004609977.1| ArsR family transcriptional reg... 80.9 5e-14
gi|171913579|ref|ZP_02929049.1| regulatory protein ArsR [Verruco... 80.5 8e-14
gi|296140680|ref|YP_003647923.1| ArsR family transcriptional reg... 79.7 1e-13
gi|116620694|ref|YP_822850.1| ArsR family transcriptional regula... 79.0 2e-13
gi|313903730|ref|ZP_07837119.1| transcriptional regulator, ArsR ... 78.6 3e-13
gi|336120029|ref|YP_004574807.1| ArsR family transcriptional reg... 77.0 9e-13
gi|153003358|ref|YP_001377683.1| regulatory protein ArsR [Anaero... 77.0 9e-13
gi|319783746|ref|YP_004143222.1| ArsR family transcription regul... 76.3 1e-12
gi|337268652|ref|YP_004612707.1| ArsR family transcriptional reg... 76.3 2e-12
gi|162449675|ref|YP_001612042.1| ArsR family transcriptional reg... 76.3 2e-12
gi|126733146|ref|ZP_01748893.1| putative transcription regulator... 75.9 2e-12
gi|254821863|ref|ZP_05226864.1| ArsR family protein transcriptio... 75.5 3e-12
>gi|289574713|ref|ZP_06454940.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
K85]
gi|289539144|gb|EFD43722.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
K85]
Length=156
Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV
Sbjct 50 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 109
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT
Sbjct 110 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 156
>gi|15841522|ref|NP_336559.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|148823250|ref|YP_001288004.1| ArsR-type repressor protein [Mycobacterium tuberculosis F11]
gi|253798909|ref|YP_003031910.1| arsR family transcriptional regulator [Mycobacterium tuberculosis
KZN 1435]
7 more sequence titles
Length=156
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV
Sbjct 50 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 109
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT
Sbjct 110 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 156
>gi|289554182|ref|ZP_06443392.1| arsR-type repressor protein [Mycobacterium tuberculosis KZN 605]
gi|289746013|ref|ZP_06505391.1| transcriptional regulator [Mycobacterium tuberculosis 02_1987]
gi|289438814|gb|EFD21307.1| arsR-type repressor protein [Mycobacterium tuberculosis KZN 605]
gi|289686541|gb|EFD54029.1| transcriptional regulator [Mycobacterium tuberculosis 02_1987]
gi|326903648|gb|EGE50581.1| arsR-type repressor protein [Mycobacterium tuberculosis W-148]
gi|328458666|gb|AEB04089.1| arsR-type repressor protein [Mycobacterium tuberculosis KZN 4207]
Length=135
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV
Sbjct 29 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 88
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT
Sbjct 89 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 135
>gi|15609171|ref|NP_216550.1| ArsR-type repressor protein [Mycobacterium tuberculosis H37Rv]
gi|31793217|ref|NP_855710.1| ArsR-type repressor protein [Mycobacterium bovis AF2122/97]
gi|121637920|ref|YP_978143.1| putative ArsR-type repressor protein [Mycobacterium bovis BCG
str. Pasteur 1173P2]
62 more sequence titles
Length=107
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/107 (99%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
+STYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV
Sbjct 1 MSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT
Sbjct 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
>gi|240170473|ref|ZP_04749132.1| ArsR-type repressor protein [Mycobacterium kansasii ATCC 12478]
Length=102
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/99 (87%), Positives = 89/99 (90%), Gaps = 0/99 (0%)
Query 9 RAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTR 68
+AWQALADGTRRAI+ERLAHGP AVGELARDLPVSRPAVSQHLKVLK A LVCDR AGTR
Sbjct 4 QAWQALADGTRRAIMERLAHGPSAVGELARDLPVSRPAVSQHLKVLKAAGLVCDRAAGTR 63
Query 69 RVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
RVYQLDPTGL ALR DLDRFWT+ALT YAQ ID EGDD
Sbjct 64 RVYQLDPTGLEALRADLDRFWTQALTNYAQTIDREGDDV 102
>gi|296166920|ref|ZP_06849337.1| ArsR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897797|gb|EFG77386.1| ArsR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=106
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/101 (84%), Positives = 89/101 (89%), Gaps = 1/101 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
++TY+S D W ALADGTRRAIVERLAHGP AVGELARDLPVSRPAVSQHLKVLK+A LV
Sbjct 1 MATYQSGD-VWGALADGTRRAIVERLAHGPSAVGELARDLPVSRPAVSQHLKVLKSAGLV 59
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLID 101
DR AGTRRVYQLDPTGL ALR DLDRFW +ALTGYAQ ID
Sbjct 60 RDRAAGTRRVYQLDPTGLQALRADLDRFWAQALTGYAQKID 100
>gi|254822494|ref|ZP_05227495.1| ArsR-type repressor protein [Mycobacterium intracellulare ATCC
13950]
Length=107
Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/107 (78%), Positives = 92/107 (86%), Gaps = 1/107 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
++TY++ D AW ALADGTRRAIVERLAHGP AVGELARDLPVSRPAVSQHLKVLK+A LV
Sbjct 1 MTTYQTAD-AWLALADGTRRAIVERLAHGPSAVGELARDLPVSRPAVSQHLKVLKSAGLV 59
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
DR AGTRRVYQLDPTGL ALR DLDRFWT+AL GYA+ ID + +
Sbjct 60 RDRAAGTRRVYQLDPTGLEALRADLDRFWTQALAGYARAIDETNEGS 106
>gi|213864635|ref|ZP_03386754.1| ArsR-type repressor protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length=79
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/79 (98%), Positives = 79/79 (100%), Gaps = 0/79 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
+STYRSPDRAWQ+LADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV
Sbjct 1 MSTYRSPDRAWQSLADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
Query 61 CDRPAGTRRVYQLDPTGLA 79
CDRPAGTRRVYQLDPTGLA
Sbjct 61 CDRPAGTRRVYQLDPTGLA 79
>gi|126436107|ref|YP_001071798.1| ArsR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126235907|gb|ABN99307.1| transcriptional regulator, ArsR family [Mycobacterium sp. JLS]
Length=121
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/106 (69%), Positives = 84/106 (80%), Gaps = 2/106 (1%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
V TY+ D AW A+AD TRR+IVERLA GP AVGELARDLPVSRPAVSQHLKVLK A LV
Sbjct 15 VVTYQQ-DEAWVAMADRTRRSIVERLARGPCAVGELARDLPVSRPAVSQHLKVLKRAGLV 73
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDS-EGD 105
D GTRRVYQL+P GLAA+R DLDRFW RAL + ++++ EG+
Sbjct 74 HDHADGTRRVYQLNPDGLAAMRADLDRFWARALADFKEIVEQREGE 119
>gi|108800491|ref|YP_640688.1| ArsR family transcriptional regulator [Mycobacterium sp. MCS]
gi|108770910|gb|ABG09632.1| transcriptional regulator, ArsR family [Mycobacterium sp. MCS]
Length=134
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/106 (69%), Positives = 84/106 (80%), Gaps = 2/106 (1%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
V TY+ D AW A+AD TRR+IVERLA GP AVGELARDLPVSRPAVSQHLKVLK A LV
Sbjct 28 VVTYQQ-DEAWVAMADRTRRSIVERLARGPCAVGELARDLPVSRPAVSQHLKVLKRAGLV 86
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDS-EGD 105
D GTRRVYQL+P GLAA+R DLDRFW RAL + ++++ EG+
Sbjct 87 HDHADGTRRVYQLNPDGLAAMRADLDRFWARALADFKEIVEQREGE 132
>gi|119869630|ref|YP_939582.1| ArsR family transcriptional regulator [Mycobacterium sp. KMS]
gi|119695719|gb|ABL92792.1| transcriptional regulator, ArsR family [Mycobacterium sp. KMS]
Length=107
Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/104 (70%), Positives = 83/104 (80%), Gaps = 2/104 (1%)
Query 3 TYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCD 62
TY+ D AW A+AD TRR+IVERLA GP AVGELARDLPVSRPAVSQHLKVLK A LV D
Sbjct 3 TYQQ-DEAWVAMADRTRRSIVERLARGPCAVGELARDLPVSRPAVSQHLKVLKRAGLVHD 61
Query 63 RPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDS-EGD 105
GTRRVYQL+P GLAA+R DLDRFW RAL + ++++ EG+
Sbjct 62 HADGTRRVYQLNPDGLAAMRADLDRFWARALADFKEIVEQREGE 105
>gi|120406449|ref|YP_956278.1| regulatory protein ArsR [Mycobacterium vanbaalenii PYR-1]
gi|119959267|gb|ABM16272.1| transcriptional regulator, ArsR family [Mycobacterium vanbaalenii
PYR-1]
Length=107
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/102 (65%), Positives = 82/102 (81%), Gaps = 1/102 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
++TY++ D W A+ADGTRR+I+ RLA GP AVGELARDLP+SRPAVSQHLKVLK+A LV
Sbjct 1 MTTYQAAD-PWHAIADGTRRSIMRRLATGPCAVGELARDLPISRPAVSQHLKVLKSAGLV 59
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDS 102
DR GTRRVYQL+P GL LR +LDRFWT+AL + +++
Sbjct 60 SDRAHGTRRVYQLNPEGLETLRAELDRFWTQALVDFKDIVEQ 101
>gi|302865223|ref|YP_003833860.1| regulatory protein ArsR [Micromonospora aurantiaca ATCC 27029]
gi|302568082|gb|ADL44284.1| regulatory protein ArsR [Micromonospora aurantiaca ATCC 27029]
Length=115
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/101 (63%), Positives = 75/101 (75%), Gaps = 1/101 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
V TYR+ D W AL D TRRAI+ LA P AVGELA LPVSRPAVSQHL+VLK A LV
Sbjct 9 VGTYRTED-GWDALGDPTRRAIIACLAEQPRAVGELAAVLPVSRPAVSQHLRVLKDAGLV 67
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLID 101
DR AGT+RVY+L+P G+AALR LD +W+RAL G+ + +
Sbjct 68 TDRTAGTKRVYRLNPAGVAALRDQLDTYWSRALDGFKDVAE 108
>gi|315501768|ref|YP_004080655.1| ArsR family transcriptional regulator [Micromonospora sp. L5]
gi|315408387|gb|ADU06504.1| transcriptional regulator, ArsR family [Micromonospora sp. L5]
Length=115
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/101 (63%), Positives = 75/101 (75%), Gaps = 1/101 (0%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
V TYR+ D W AL D TRRAI+ LA P AVGELA LPVSRPAVSQHL+VLK A LV
Sbjct 9 VGTYRTED-GWDALGDPTRRAIIACLAEQPRAVGELAAVLPVSRPAVSQHLRVLKDAGLV 67
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLID 101
DR AGT+RVY+L+P G+AALR LD +W+RAL G+ + +
Sbjct 68 TDRTAGTKRVYRLNPAGVAALRDQLDTYWSRALDGFKDVAE 108
>gi|317123737|ref|YP_004097849.1| ArsR transcriptional regulator [Intrasporangium calvum DSM 43043]
gi|315587825|gb|ADU47122.1| transcriptional regulator, ArsR family [Intrasporangium calvum
DSM 43043]
Length=112
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/90 (66%), Positives = 69/90 (77%), Gaps = 0/90 (0%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
W AL D TRRAIVE LA P AVGELA +LPVSRPAVSQ LKVL+ A LV +R AGTRR+
Sbjct 10 WTALGDPTRRAIVEFLAERPRAVGELAAELPVSRPAVSQALKVLRDAGLVTERVAGTRRI 69
Query 71 YQLDPTGLAALRTDLDRFWTRALTGYAQLI 100
Y+L+P +AALR LD FW+RALT Y + +
Sbjct 70 YRLNPVAVAALRDQLDTFWSRALTNYGEAV 99
>gi|300784590|ref|YP_003764881.1| ArsR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299794104|gb|ADJ44479.1| ArsR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340526012|gb|AEK41217.1| ArsR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=106
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/101 (61%), Positives = 74/101 (74%), Gaps = 2/101 (1%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
++TY S A ALAD +RRAI E L GP AVGELA DLP+SRPAVSQHLKVLK A LV
Sbjct 1 MATYGSDQLA--ALADPSRRAIFEALRDGPRAVGELAADLPISRPAVSQHLKVLKEAGLV 58
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLID 101
DR GT+R+Y+L+P G+AALR LD W+ AL +A+L +
Sbjct 59 TDRAVGTKRLYRLEPAGIAALRAYLDGMWSDALKAFAELAE 99
>gi|312196876|ref|YP_004016937.1| regulatory protein ArsR [Frankia sp. EuI1c]
gi|311228212|gb|ADP81067.1| regulatory protein ArsR [Frankia sp. EuI1c]
Length=104
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/106 (56%), Positives = 78/106 (74%), Gaps = 3/106 (2%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
++TY++ A+ ALAD TRRA+ ERLA P +VGELA++LPVSRPAVSQHL+VLK A LV
Sbjct 1 MATYQA---AFAALADPTRRAVFERLADRPSSVGELAQELPVSRPAVSQHLRVLKDAGLV 57
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDD 106
D+ AGTRR+Y+ +P G+A LR LDRFW R+L + + + D
Sbjct 58 VDQAAGTRRIYRANPDGVAMLRDYLDRFWRRSLDTFKSVAEESFHD 103
>gi|15965744|ref|NP_386097.1| putative transcription regulator protein [Sinorhizobium meliloti
1021]
gi|334316683|ref|YP_004549302.1| regulatory protein ArsR [Sinorhizobium meliloti AK83]
gi|15075013|emb|CAC46570.1| Putative transcription regulator [Sinorhizobium meliloti 1021]
gi|333812045|gb|AEG04714.1| regulatory protein ArsR [Sinorhizobium meliloti BL225C]
gi|334095677|gb|AEG53688.1| regulatory protein ArsR [Sinorhizobium meliloti AK83]
gi|336032682|gb|AEH78614.1| putative transcription regulator protein [Sinorhizobium meliloti
SM11]
Length=109
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/91 (58%), Positives = 65/91 (72%), Gaps = 0/91 (0%)
Query 8 DRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGT 67
DRA+ ALAD TRRAI E++A +V E+AR +PVS+PA+SQHLK+LK A LV D P+G
Sbjct 6 DRAFIALADPTRRAIFEKVAERRQSVAEIARAMPVSQPAISQHLKILKEAHLVRDVPSGA 65
Query 68 RRVYQLDPTGLAALRTDLDRFWTRALTGYAQ 98
RR+Y +DP GL LR LDRFW L + Q
Sbjct 66 RRIYSIDPNGLGPLRKWLDRFWDDQLAAFKQ 96
>gi|319777997|ref|YP_004134427.1| regulatory protein arsr [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171716|gb|ADV15253.1| regulatory protein ArsR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length=117
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/96 (53%), Positives = 64/96 (67%), Gaps = 0/96 (0%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
W AL D TRR I E L P +V LAR LPV+RPAVSQHLKVLK A LV D +G +
Sbjct 20 WTALGDSTRRTIFELLLEQPCSVSGLARALPVTRPAVSQHLKVLKEAGLVADTRSGKESI 79
Query 71 YQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDD 106
Y++DP GLA+LR ++D+FW++ L GY ++ D
Sbjct 80 YRIDPGGLASLRAEVDQFWSKTLAGYKLAVEPPKKD 115
>gi|337268968|ref|YP_004613023.1| ArsR family transcriptional regulator [Mesorhizobium opportunistum
WSM2075]
gi|336029278|gb|AEH88929.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum
WSM2075]
Length=105
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/97 (51%), Positives = 65/97 (68%), Gaps = 0/97 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
+W AL D TRR + E L P +V ELA LPV+R AVSQHLKVLK A LV D +G +R
Sbjct 7 SWTALGDPTRRTVFELLVEQPCSVTELAHALPVTRSAVSQHLKVLKDAGLVADTRSGKQR 66
Query 70 VYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDD 106
+Y++DP GLA LR +LDRFW++ L Y ++ ++
Sbjct 67 IYRVDPDGLARLRAELDRFWSKTLAAYKVAVERSSEE 103
>gi|126725842|ref|ZP_01741684.1| putative transcription regulator protein [Rhodobacterales bacterium
HTCC2150]
gi|126705046|gb|EBA04137.1| putative transcription regulator protein [Rhodobacterales bacterium
HTCC2150]
Length=108
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/95 (53%), Positives = 64/95 (68%), Gaps = 0/95 (0%)
Query 13 ALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRVYQ 72
ALAD RR + E LA P++V +LA+ P+SRPAVSQHLKVL+ A LV P GT+R+Y
Sbjct 9 ALADTRRRMLFETLAMNPMSVADLAQTQPISRPAVSQHLKVLENAGLVTASPQGTKRIYA 68
Query 73 LDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT 107
+DP GLA LR +D FW ALT +A I ++ T
Sbjct 69 VDPQGLAPLRRYIDGFWDDALTAFADHIQAQKTKT 103
>gi|326334010|ref|ZP_08200239.1| toxin-antitoxin system, antitoxin component, ArsR family [Nocardioidaceae
bacterium Broad-1]
gi|325948159|gb|EGD40270.1| toxin-antitoxin system, antitoxin component, ArsR family [Nocardioidaceae
bacterium Broad-1]
Length=105
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (54%), Positives = 64/91 (71%), Gaps = 0/91 (0%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
W A++D TRR ++ R+A GP +VGE+A LPVS AVSQHLKVL+ A LV PAG RR+
Sbjct 5 WYAVSDSTRRQVLARVAAGPCSVGEIADALPVSMAAVSQHLKVLREAGLVSMTPAGRRRI 64
Query 71 YQLDPTGLAALRTDLDRFWTRALTGYAQLID 101
YQ GLA LR +LD +WT+AL + Q+ +
Sbjct 65 YQARLEGLAELRAELDTYWTQALHSFKQVAE 95
>gi|255264143|ref|ZP_05343485.1| transcriptional regulator, ArsR family [Thalassiobium sp. R2A62]
gi|255106478|gb|EET49152.1| transcriptional regulator, ArsR family [Thalassiobium sp. R2A62]
Length=106
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/88 (60%), Positives = 62/88 (71%), Gaps = 0/88 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A ALAD TRRAI+ L GPLAV LA DLPV+RPAVSQHL+VL A L+ P GTRR
Sbjct 2 AITALADPTRRAIMNALREGPLAVSALANDLPVTRPAVSQHLRVLSDAGLLTVTPHGTRR 61
Query 70 VYQLDPTGLAALRTDLDRFWTRALTGYA 97
+Y + P G+AA+R+ LD WT AL +A
Sbjct 62 LYSIAPDGIAAIRSYLDSLWTDALDAFA 89
>gi|229822405|ref|YP_002883931.1| ArsR family transcriptional regulator [Beutenbergia cavernae
DSM 12333]
gi|229568318|gb|ACQ82169.1| transcriptional regulator, ArsR family [Beutenbergia cavernae
DSM 12333]
Length=107
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/92 (56%), Positives = 66/92 (72%), Gaps = 0/92 (0%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
W ALAD TRR I+ R+ P +V +LARD+PVSRPAVSQHL+VL ARLV RP G +R+
Sbjct 7 WTALADPTRRGILARVLARPTSVTDLARDVPVSRPAVSQHLQVLLEARLVEVRPQGRQRI 66
Query 71 YQLDPTGLAALRTDLDRFWTRALTGYAQLIDS 102
Y GLA LR +L++FWT+AL + Q+ +S
Sbjct 67 YSARLDGLADLRHELEQFWTQALATFKQVAES 98
>gi|331698118|ref|YP_004334357.1| ArsR family transcriptional regulator [Pseudonocardia dioxanivorans
CB1190]
gi|326952807|gb|AEA26504.1| transcriptional regulator, ArsR family [Pseudonocardia dioxanivorans
CB1190]
Length=120
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 58/85 (69%), Gaps = 0/85 (0%)
Query 14 LADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRVYQL 73
L D +RRAI E LA P +V EL LP+SRPAVSQHLKVLK LV R GTRR+YQL
Sbjct 12 LGDPSRRAIFELLARHPCSVQELTDLLPISRPAVSQHLKVLKDGGLVVSRAEGTRRIYQL 71
Query 74 DPTGLAALRTDLDRFWTRALTGYAQ 98
P G+ ALRT LD W ALTG+ +
Sbjct 72 RPDGVTALRTWLDGVWQDALTGFQK 96
>gi|146339923|ref|YP_001204971.1| Ars family transcriptional regulator [Bradyrhizobium sp. ORS
278]
gi|146192729|emb|CAL76734.1| putative transcriptional regulatory protein, Ars family [Bradyrhizobium
sp. ORS 278]
Length=111
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/87 (59%), Positives = 56/87 (65%), Gaps = 0/87 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A LAD TRR + ERL GP AV +A LPVSRPAVSQHLKVLK A LV +R G RR
Sbjct 6 ALTVLADQTRRQVFERLRSGPAAVNAIAAGLPVSRPAVSQHLKVLKDAGLVEERSEGVRR 65
Query 70 VYQLDPTGLAALRTDLDRFWTRALTGY 96
+Y L GLA LR LD FW AL +
Sbjct 66 IYSLRREGLAELRDWLDSFWDDALLAF 92
>gi|110636384|ref|YP_676592.1| ArsR family transcriptional regulator [Mesorhizobium sp. BNC1]
gi|110287368|gb|ABG65427.1| transcriptional regulator, ArsR family [Chelativorans sp. BNC1]
Length=104
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/94 (48%), Positives = 60/94 (64%), Gaps = 0/94 (0%)
Query 13 ALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRVYQ 72
ALAD TR A+ E +A P +V E+ R LPV++ AVSQHLKVL+ A+LV P G +Y
Sbjct 10 ALADPTRLAVFELVAEQPRSVAEITRSLPVTQSAVSQHLKVLREAQLVRSEPRGASNIYH 69
Query 73 LDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDD 106
+DP GL +R LDRFW AL + + ++ E D
Sbjct 70 VDPAGLVRMRAWLDRFWGSALQEFQKQVEQEWRD 103
>gi|54024267|ref|YP_118509.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54015775|dbj|BAD57145.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=111
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (48%), Positives = 64/98 (66%), Gaps = 2/98 (2%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
++ +R D A L D TRRAI ERLA P +VGELA LP++R AVSQHL+VL+ LV
Sbjct 1 MAAFRDVDLA--ILGDPTRRAIFERLARRPSSVGELAESLPITRQAVSQHLRVLRDGGLV 58
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQ 98
GTRR+Y+++P GLAA++ + W ALT + +
Sbjct 59 VATAQGTRRIYRINPEGLAAIQAYFQQIWDEALTAFQK 96
>gi|334336302|ref|YP_004541454.1| regulatory protein ArsR [Isoptericola variabilis 225]
gi|334106670|gb|AEG43560.1| regulatory protein ArsR [Isoptericola variabilis 225]
Length=107
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/107 (54%), Positives = 63/107 (59%), Gaps = 6/107 (5%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
+ TY+ A AL D TRRA+VERL GP V LA LPVSRPAVSQHL+VL+ A LV
Sbjct 1 MGTYQE---ALDALGDPTRRALVERLVRGPAPVSRLADGLPVSRPAVSQHLRVLRDAGLV 57
Query 61 CDRPAGTRRVYQLDPTGLAALRTDLDRFWT---RALTGYAQLIDSEG 104
GTR VY+LD G ALR LD FW A YA SEG
Sbjct 58 AYETVGTRHVYRLDRAGFDALRAWLDGFWNDVLEAFEDYAGRGPSEG 104
>gi|316932262|ref|YP_004107244.1| regulatory protein ArsR [Rhodopseudomonas palustris DX-1]
gi|315599976|gb|ADU42511.1| regulatory protein ArsR [Rhodopseudomonas palustris DX-1]
Length=105
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/84 (49%), Positives = 54/84 (65%), Gaps = 0/84 (0%)
Query 13 ALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRVYQ 72
AL D TRR I E +A P +V E+ R + VS+ AVSQHLKVL+ +RLV P G +Y
Sbjct 10 ALGDSTRRTIFELVAEQPRSVAEITRQVSVSQSAVSQHLKVLRESRLVRSEPKGASNIYY 69
Query 73 LDPTGLAALRTDLDRFWTRALTGY 96
+DP GL +R +DRFW++ L Y
Sbjct 70 VDPHGLGEMRAWIDRFWSKTLAAY 93
>gi|54025079|ref|YP_119321.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54016587|dbj|BAD57957.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=108
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/81 (61%), Positives = 56/81 (70%), Gaps = 0/81 (0%)
Query 9 RAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTR 68
RA +ALAD TRRAI E L P +VGELA + VS AVSQHLKVL+ ARLV RP G R
Sbjct 7 RALEALADPTRRAIFEALPATPRSVGELAAIVGVSSSAVSQHLKVLRAARLVMVRPRGNR 66
Query 69 RVYQLDPTGLAALRTDLDRFW 89
R+Y LDP GL R L++FW
Sbjct 67 RLYTLDPRGLGDARDYLEQFW 87
>gi|319781113|ref|YP_004140589.1| ArsR family transcription regulator [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167001|gb|ADV10539.1| regulatory protein ArsR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length=87
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/80 (58%), Positives = 53/80 (67%), Gaps = 0/80 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A+ A+AD RR ++E L GP V ELA LPVSRPAVSQHLKVL A LV +P GTRR
Sbjct 6 AFMAIADPNRRHLLEELRRGPKTVTELAAGLPVSRPAVSQHLKVLLDAGLVHAKPEGTRR 65
Query 70 VYQLDPTGLAALRTDLDRFW 89
VY + TG L LD+FW
Sbjct 66 VYTVSGTGFLKLNIWLDQFW 85
>gi|148256558|ref|YP_001241143.1| ArsR family transcriptional regulator [Bradyrhizobium sp. BTAi1]
gi|146408731|gb|ABQ37237.1| transcriptional regulator, ArsR family [Bradyrhizobium sp. BTAi1]
Length=109
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/87 (57%), Positives = 54/87 (63%), Gaps = 0/87 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A LAD TRR + ERL GP V +A LPVSRPAVSQHLKVLK A LV + G RR
Sbjct 6 ALTVLADPTRRQVFERLRDGPRPVNAIAAGLPVSRPAVSQHLKVLKDAGLVEEHSEGARR 65
Query 70 VYQLDPTGLAALRTDLDRFWTRALTGY 96
+Y L GLA LR LD FW AL +
Sbjct 66 IYALRREGLAELREWLDGFWDDALLAF 92
>gi|317122571|ref|YP_004102574.1| ArsR family transcriptional regulator [Thermaerobacter marianensis
DSM 12885]
gi|315592551|gb|ADU51847.1| transcriptional regulator, ArsR family [Thermaerobacter marianensis
DSM 12885]
Length=105
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/101 (51%), Positives = 64/101 (64%), Gaps = 3/101 (2%)
Query 8 DRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGT 67
DRA+ ALAD TRR IV L GP VG LAR LP+SRPAVS+HL VL A LV +G
Sbjct 4 DRAFAALADPTRRHIVTVLRSGPQDVGTLARPLPISRPAVSKHLAVLVAAGLVEVEKSGR 63
Query 68 RRVYQLDPTGLAALRTDLD---RFWTRALTGYAQLIDSEGD 105
RR+Y+L P G A +R LD R W AL + + ++ +G+
Sbjct 64 RRLYRLHPQGFAEVRRWLDQVARTWDVALEHFRRHVEGDGE 104
>gi|154253112|ref|YP_001413936.1| regulatory protein ArsR [Parvibaculum lavamentivorans DS-1]
gi|154157062|gb|ABS64279.1| regulatory protein ArsR [Parvibaculum lavamentivorans DS-1]
Length=106
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/82 (55%), Positives = 55/82 (68%), Gaps = 3/82 (3%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
+ ALAD TRR IVE LA G LA G++AR +S PAVSQHLK LK+ARLV R RR+
Sbjct 4 FTALADPTRRQIVEMLAAGELAAGDIARRFEMSAPAVSQHLKALKSARLVRVRVDAQRRI 63
Query 71 YQLDPTGLAALRT---DLDRFW 89
Y LDP G+ + T ++ RFW
Sbjct 64 YSLDPQGIEGIETWLANIRRFW 85
>gi|220919006|ref|YP_002494310.1| ArsR family transcriptional regulator [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956860|gb|ACL67244.1| transcriptional regulator, ArsR family [Anaeromyxobacter dehalogenans
2CP-1]
Length=105
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/98 (46%), Positives = 59/98 (61%), Gaps = 3/98 (3%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
+ ALA RR I+ +L GP AV ELAR V RPAVS+HL+VL+ ARLV + P G R
Sbjct 6 VFSALASPIRREILWQLRKGPRAVNELARAFEVGRPAVSEHLQVLRRARLVREEPRGRER 65
Query 70 VYQLDPTGLAALR---TDLDRFWTRALTGYAQLIDSEG 104
Y LDP L+ + +R+WT+ LT L+D +G
Sbjct 66 YYHLDPRPLSEVERWLETFERYWTQRLTALEDLLDEKG 103
>gi|13473237|ref|NP_104804.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
gi|14023985|dbj|BAB50590.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
Length=87
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 51/80 (64%), Gaps = 0/80 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A+ A+AD RR ++E L GP V ELA LPVSRPAVSQHLKVL A LV + GTRR
Sbjct 6 AFMAIADPNRRHLLEELRRGPKTVNELAAGLPVSRPAVSQHLKVLLDAGLVNAKAEGTRR 65
Query 70 VYQLDPTGLAALRTDLDRFW 89
VY + G L LD+FW
Sbjct 66 VYTVSNAGFLRLNIWLDQFW 85
>gi|89070382|ref|ZP_01157689.1| transcriptional regulator [Oceanicola granulosus HTCC2516]
gi|89044029|gb|EAR50204.1| transcriptional regulator [Oceanicola granulosus HTCC2516]
Length=113
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/88 (58%), Positives = 55/88 (63%), Gaps = 1/88 (1%)
Query 2 STYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVC 61
ST +PD + ALAD TRRAIVE L GP VG LA LPVSRPAVSQHLKVL A L
Sbjct 6 STPAAPD-IFAALADPTRRAIVEALRAGPQPVGVLAGGLPVSRPAVSQHLKVLTDAGLAR 64
Query 62 DRPAGTRRVYQLDPTGLAALRTDLDRFW 89
G RR Y L P G+ +LR LD W
Sbjct 65 ATARGNRRYYSLAPEGVESLRRYLDTLW 92
>gi|337265922|ref|YP_004609977.1| ArsR family transcriptional regulator [Mesorhizobium opportunistum
WSM2075]
gi|336026232|gb|AEH85883.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum
WSM2075]
Length=86
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 51/80 (64%), Gaps = 0/80 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A+ A+AD RR ++E L GP V ELA LPVSRPAVSQHLKVL A LV + GTRR
Sbjct 5 AFMAIADPNRRHLLEELRRGPKTVNELAAGLPVSRPAVSQHLKVLLDAGLVHAKAEGTRR 64
Query 70 VYQLDPTGLAALRTDLDRFW 89
VY + G L LD+FW
Sbjct 65 VYTVSNAGFLRLNIWLDQFW 84
>gi|171913579|ref|ZP_02929049.1| regulatory protein ArsR [Verrucomicrobium spinosum DSM 4136]
Length=109
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/96 (47%), Positives = 59/96 (62%), Gaps = 4/96 (4%)
Query 12 QALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRVY 71
+ALAD TRR IVE L+ G L G + +S PA+SQHLKVL+TA LV R G RR++
Sbjct 5 EALADPTRRRIVEILSEGELTAGAICSHFDMSAPAISQHLKVLRTAHLVTVRVEGQRRIH 64
Query 72 QLDPTGLAALRT---DLDRFWTRALTGY-AQLIDSE 103
LDP G+ + T + RFW R+L A+L+ E
Sbjct 65 GLDPAGIREIETWLAHMKRFWNRSLDALEAELLKPE 100
>gi|296140680|ref|YP_003647923.1| ArsR family transcriptional regulator [Tsukamurella paurometabola
DSM 20162]
gi|296028814|gb|ADG79584.1| transcriptional regulator, ArsR family [Tsukamurella paurometabola
DSM 20162]
Length=106
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/103 (44%), Positives = 63/103 (62%), Gaps = 3/103 (2%)
Query 3 TYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCD 62
T S DR + ALA+ RR +++ L GPLA GEL+ +SRPAV++HLKVL+ A LV D
Sbjct 2 TTESADRVFVALANPIRRELLQILRTGPLAAGELSERFTLSRPAVTEHLKVLREAGLVVD 61
Query 63 RPAGTRRVYQLDPTGLAALRTDL---DRFWTRALTGYAQLIDS 102
P+G RR+Y+L LA L L ++FW L+ A + +
Sbjct 62 EPSGRRRIYRLTAEPLAELEEWLHPFEKFWRARLSALATVAEE 104
>gi|116620694|ref|YP_822850.1| ArsR family transcriptional regulator [Candidatus Solibacter
usitatus Ellin6076]
gi|116223856|gb|ABJ82565.1| transcriptional regulator, ArsR family [Candidatus Solibacter
usitatus Ellin6076]
Length=108
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/98 (46%), Positives = 62/98 (64%), Gaps = 3/98 (3%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
+QA+AD TRRAI++RL +G AV E+A VSRPA+S+HL+VL ARLV + G R
Sbjct 8 VFQAIADPTRRAILDRLRNGGQAVNEIAGRFDVSRPAISKHLRVLHDARLVTEVRDGRNR 67
Query 70 VYQLDPTGLAALRTDLD---RFWTRALTGYAQLIDSEG 104
+Y+L+P L L LD RFW L + ++S+G
Sbjct 68 IYRLNPEPLRELDRWLDDYRRFWALNLLNLKKHVESKG 105
>gi|313903730|ref|ZP_07837119.1| transcriptional regulator, ArsR family [Thermaerobacter subterraneus
DSM 13965]
gi|313465918|gb|EFR61443.1| transcriptional regulator, ArsR family [Thermaerobacter subterraneus
DSM 13965]
Length=105
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/101 (49%), Positives = 63/101 (63%), Gaps = 3/101 (2%)
Query 8 DRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGT 67
DR + ALAD TRR I+ L GP V LAR LP+SRPAVS+HL VL A LV +G
Sbjct 4 DRKFAALADPTRRHIITVLRSGPKDVVTLARPLPISRPAVSKHLAVLTAAGLVEVEKSGR 63
Query 68 RRVYQLDPTGLAALRTDLD---RFWTRALTGYAQLIDSEGD 105
RR+Y+L P GLA +R LD R W AL + + ++ +G+
Sbjct 64 RRLYRLRPEGLAEVRDWLDQVARAWDVALERFRRHVEGDGE 104
>gi|336120029|ref|YP_004574807.1| ArsR family transcriptional regulator [Microlunatus phosphovorus
NM-1]
gi|334687819|dbj|BAK37404.1| ArsR family transcriptional regulator [Microlunatus phosphovorus
NM-1]
Length=103
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/92 (52%), Positives = 56/92 (61%), Gaps = 0/92 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A AL D TRR IVE L GP VG LA LPV RPAVS+HLKVL+ A LV R GTR
Sbjct 8 ALDALGDPTRRQIVEVLRDGPRPVGALADALPVGRPAVSKHLKVLEGAGLVEHRSIGTRN 67
Query 70 VYQLDPTGLAALRTDLDRFWTRALTGYAQLID 101
+Y L P GL ++ L W AL +A+ ++
Sbjct 68 LYALAPGGLDVVQRWLVTQWDTALGAFAEHVE 99
>gi|153003358|ref|YP_001377683.1| regulatory protein ArsR [Anaeromyxobacter sp. Fw109-5]
gi|152026931|gb|ABS24699.1| regulatory protein ArsR [Anaeromyxobacter sp. Fw109-5]
Length=109
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/101 (44%), Positives = 61/101 (61%), Gaps = 4/101 (3%)
Query 6 SPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPA 65
PD + ALA+ RR I+ +L GP AV +LA V RPA+S+HL+VL+ ARLV + P
Sbjct 7 QPD-VFSALANPVRRNILMQLRKGPRAVKDLAAGFDVGRPAISEHLQVLRQARLVREEPR 65
Query 66 GTRRVYQLDPTGLAALRTDLD---RFWTRALTGYAQLIDSE 103
G R Y LDP L+ + T L+ R+W R L +++D E
Sbjct 66 GRERYYHLDPRPLSEVDTWLEAFSRYWERRLVALGEVLDKE 106
>gi|319783746|ref|YP_004143222.1| ArsR family transcription regulator [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169634|gb|ADV13172.1| regulatory protein ArsR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length=104
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/80 (53%), Positives = 56/80 (70%), Gaps = 0/80 (0%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
++ALAD TRRA+ ERLA G ++V EL + VS+PAVSQHL VL+ A LV +R AG
Sbjct 7 FRALADPTRRAVFERLAAGEMSVSELRTGMTVSQPAVSQHLAVLRGAGLVVERRAGRNAY 66
Query 71 YQLDPTGLAALRTDLDRFWT 90
Y+ DP GLA L + ++R+ T
Sbjct 67 YRADPQGLAPLLSWIERYRT 86
>gi|337268652|ref|YP_004612707.1| ArsR family transcriptional regulator [Mesorhizobium opportunistum
WSM2075]
gi|336028962|gb|AEH88613.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum
WSM2075]
Length=104
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/80 (53%), Positives = 56/80 (70%), Gaps = 0/80 (0%)
Query 11 WQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRV 70
++ALAD TRRA+ ERLA ++V EL L VS+PAVSQHL VL++A LV +R AG
Sbjct 7 FRALADPTRRAVFERLATAEMSVSELRSGLTVSQPAVSQHLAVLRSAGLVVERRAGRNAY 66
Query 71 YQLDPTGLAALRTDLDRFWT 90
Y+ DP GLA L + ++R+ T
Sbjct 67 YRADPQGLAPLLSWIERYRT 86
>gi|162449675|ref|YP_001612042.1| ArsR family transcriptional regulator [Sorangium cellulosum 'So
ce 56']
gi|161160257|emb|CAN91562.1| transcriptional regulator, ArsR family [Sorangium cellulosum
'So ce 56']
Length=105
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (43%), Positives = 57/98 (59%), Gaps = 3/98 (3%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
+ ALA+ RR I+ +L GP AV +LAR + RPAVS+HL+VL+ ARLV + P G R
Sbjct 6 VFSALANPVRREILMQLRMGPRAVNDLARGFDLGRPAVSEHLQVLRKARLVREEPRGRER 65
Query 70 VYQLDPTGLAALR---TDLDRFWTRALTGYAQLIDSEG 104
Y LDP L+ + T R+W L L++ EG
Sbjct 66 YYHLDPRPLSEVDEWLTTFTRYWKTRLAALEDLLNEEG 103
>gi|126733146|ref|ZP_01748893.1| putative transcription regulator protein [Roseobacter sp. CCS2]
gi|126716012|gb|EBA12876.1| putative transcription regulator protein [Roseobacter sp. CCS2]
Length=109
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/80 (52%), Positives = 51/80 (64%), Gaps = 0/80 (0%)
Query 10 AWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRR 69
A ALAD TRR I++RL G L V +A+ + VSRPAVSQHL+VL A L+ P G RR
Sbjct 6 AITALADPTRRIIIDRLRGGSLPVAAIAKGMDVSRPAVSQHLRVLSDAGLLTVTPKGNRR 65
Query 70 VYQLDPTGLAALRTDLDRFW 89
+Y + P G+ LR LD W
Sbjct 66 LYAIAPDGVDGLRRYLDTLW 85
>gi|254821863|ref|ZP_05226864.1| ArsR family protein transcriptional regulator [Mycobacterium
intracellulare ATCC 13950]
Length=108
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/105 (42%), Positives = 61/105 (59%), Gaps = 3/105 (2%)
Query 1 VSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLV 60
+ST DR + ALA+ RR ++E L PL+ GEL+ +SRPAV++HLKVL+ ARLV
Sbjct 2 LSTVTGVDRVFLALANPVRRELLEILFRQPLSAGELSERFELSRPAVAEHLKVLRDARLV 61
Query 61 CDRPAGTRRVYQLDPTGLAALRTDL---DRFWTRALTGYAQLIDS 102
D P G R+Y L LA L L ++FW L A++ +
Sbjct 62 ADEPRGRHRIYHLTAEPLAELGEWLHPFEKFWRARLARLAEVAEE 106
Lambda K H
0.321 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130484177216
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40