BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2036
Length=213
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609173|ref|NP_216552.1| hypothetical protein Rv2036 [Mycoba... 427 5e-118
gi|15841524|ref|NP_336561.1| hypothetical protein MT2096 [Mycoba... 427 6e-118
gi|289554180|ref|ZP_06443390.1| conserved hypothetical protein [... 427 7e-118
gi|31793219|ref|NP_855712.1| hypothetical protein Mb2062 [Mycoba... 426 1e-117
gi|289443534|ref|ZP_06433278.1| conserved hypothetical protein [... 424 5e-117
gi|340627047|ref|YP_004745499.1| hypothetical protein MCAN_20591... 420 9e-116
gi|240170475|ref|ZP_04749134.1| hypothetical protein MkanA1_1427... 328 5e-88
gi|296166922|ref|ZP_06849339.1| conserved hypothetical protein [... 283 1e-74
gi|118463200|ref|YP_879520.1| hypothetical protein MAV_0227 [Myc... 282 3e-74
gi|41406329|ref|NP_959165.1| hypothetical protein MAP0231c [Myco... 280 7e-74
gi|342860049|ref|ZP_08716701.1| hypothetical protein MCOL_14260 ... 271 4e-71
gi|126436105|ref|YP_001071796.1| hypothetical protein Mjls_3528 ... 263 9e-69
gi|108800489|ref|YP_640686.1| hypothetical protein Mmcs_3523 [My... 263 1e-68
gi|291298889|ref|YP_003510167.1| hypothetical protein Snas_1367 ... 227 1e-57
gi|331696945|ref|YP_004333184.1| hypothetical protein Psed_3135 ... 222 3e-56
gi|331698120|ref|YP_004334359.1| hypothetical protein Psed_4347 ... 220 8e-56
gi|226360345|ref|YP_002778123.1| hypothetical protein ROP_09310 ... 212 2e-53
gi|317506146|ref|ZP_07963969.1| hypothetical protein HMPREF9336_... 202 4e-50
gi|118615988|ref|YP_904320.1| hypothetical protein MUL_0076 [Myc... 199 2e-49
gi|326334012|ref|ZP_08200241.1| hypothetical protein NBCG_05443 ... 198 5e-49
gi|169628674|ref|YP_001702323.1| hypothetical protein MAB_1584 [... 188 4e-46
gi|302528963|ref|ZP_07281305.1| predicted protein [Streptomyces ... 184 7e-45
gi|326382733|ref|ZP_08204423.1| hypothetical protein SCNU_07338 ... 176 2e-42
gi|169631861|ref|YP_001705510.1| hypothetical protein MAB_4788c ... 144 8e-33
gi|326778379|ref|ZP_08237644.1| hypothetical protein CHP03083 [S... 124 1e-26
gi|182437745|ref|YP_001825464.1| hypothetical protein SGR_3952 [... 120 2e-25
gi|226366110|ref|YP_002783893.1| hypothetical protein ROP_67010 ... 119 2e-25
gi|111017805|ref|YP_700777.1| hypothetical protein RHA1_ro00784 ... 117 1e-24
gi|120406339|ref|YP_956168.1| hypothetical protein Mvan_5391 [My... 117 1e-24
gi|315506267|ref|YP_004085154.1| hypothetical protein ML5_5542 [... 114 1e-23
gi|240169227|ref|ZP_04747886.1| hypothetical protein MkanA1_0793... 113 2e-23
gi|302867327|ref|YP_003835964.1| hypothetical protein Micau_2854... 113 2e-23
gi|291301966|ref|YP_003513244.1| hypothetical protein Snas_4506 ... 113 2e-23
gi|239988866|ref|ZP_04709530.1| hypothetical protein SrosN1_1626... 112 3e-23
gi|320007365|gb|ADW02215.1| hypothetical protein Sfla_0753 [Stre... 111 6e-23
gi|111023676|ref|YP_706648.1| hypothetical protein RHA1_ro06718 ... 110 1e-22
gi|284033136|ref|YP_003383067.1| hypothetical protein Kfla_5254 ... 110 1e-22
gi|296140772|ref|YP_003648015.1| hypothetical protein Tpau_3084 ... 110 2e-22
gi|148271498|ref|YP_001221059.1| hypothetical protein CMM_0319 [... 109 3e-22
gi|309813026|ref|ZP_07706754.1| conserved hypothetical protein [... 108 4e-22
gi|226363411|ref|YP_002781193.1| hypothetical protein ROP_40010 ... 108 6e-22
gi|84494513|ref|ZP_00993632.1| hypothetical protein JNB_06944 [J... 106 2e-21
gi|111021107|ref|YP_704079.1| hypothetical protein RHA1_ro04125 ... 105 3e-21
gi|330468422|ref|YP_004406165.1| hypothetical protein VAB18032_2... 105 5e-21
gi|183980914|ref|YP_001849205.1| hypothetical protein MMAR_0893 ... 104 7e-21
gi|326330608|ref|ZP_08196913.1| hypothetical protein NBCG_02041 ... 104 7e-21
gi|260904645|ref|ZP_05912967.1| hypothetical protein BlinB_04889... 103 2e-20
gi|54026754|ref|YP_120996.1| hypothetical protein nfa47800 [Noca... 103 2e-20
gi|332668912|ref|YP_004451920.1| hypothetical protein Celf_0390 ... 103 2e-20
gi|226361786|ref|YP_002779564.1| hypothetical protein ROP_23720 ... 102 3e-20
>gi|15609173|ref|NP_216552.1| hypothetical protein Rv2036 [Mycobacterium tuberculosis H37Rv]
gi|148661850|ref|YP_001283373.1| hypothetical protein MRA_2051 [Mycobacterium tuberculosis H37Ra]
gi|148823252|ref|YP_001288006.1| hypothetical protein TBFG_12073 [Mycobacterium tuberculosis F11]
53 more sequence titles
Length=213
Score = 427 bits (1098), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG
Sbjct 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI
Sbjct 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT
Sbjct 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG
Sbjct 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
>gi|15841524|ref|NP_336561.1| hypothetical protein MT2096 [Mycobacterium tuberculosis CDC1551]
gi|13881768|gb|AAK46375.1| hypothetical protein MT2096 [Mycobacterium tuberculosis CDC1551]
Length=231
Score = 427 bits (1097), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG
Sbjct 19 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 78
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI
Sbjct 79 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 138
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT
Sbjct 139 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 198
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG
Sbjct 199 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 231
>gi|289554180|ref|ZP_06443390.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|289438812|gb|EFD21305.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
Length=219
Score = 427 bits (1097), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG
Sbjct 7 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 66
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI
Sbjct 67 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 126
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT
Sbjct 127 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 186
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG
Sbjct 187 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 219
>gi|31793219|ref|NP_855712.1| hypothetical protein Mb2062 [Mycobacterium bovis AF2122/97]
gi|121637922|ref|YP_978145.1| hypothetical protein BCG_2055 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990416|ref|YP_002645103.1| hypothetical protein JTY_2050 [Mycobacterium bovis BCG str. Tokyo
172]
12 more sequence titles
Length=213
Score = 426 bits (1094), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 212/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG
Sbjct 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
VFGLLKRFAKGRIVRANEVGVDEFAGLSPQEL DYVGRHLQPRGLTAGFGGMIALVDGMI
Sbjct 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELVDYVGRHLQPRGLTAGFGGMIALVDGMI 120
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT
Sbjct 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG
Sbjct 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
>gi|289443534|ref|ZP_06433278.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289570145|ref|ZP_06450372.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750624|ref|ZP_06510002.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289416453|gb|EFD13693.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289543899|gb|EFD47547.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289691211|gb|EFD58640.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=213
Score = 424 bits (1089), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 211/213 (99%), Positives = 211/213 (99%), Gaps = 0/213 (0%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
MIAADDDTEK MMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG
Sbjct 1 MIAADDDTEKYMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
VFGLLKRFAKGRIVRANEVGVDEFAGLSPQEL DYVGRHLQPRGLTAGFGGMIALVDGMI
Sbjct 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELVDYVGRHLQPRGLTAGFGGMIALVDGMI 120
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT
Sbjct 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG
Sbjct 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
>gi|340627047|ref|YP_004745499.1| hypothetical protein MCAN_20591 [Mycobacterium canettii CIPT
140010059]
gi|340005237|emb|CCC44391.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=213
Score = 420 bits (1079), Expect = 9e-116, Method: Compositional matrix adjust.
Identities = 209/213 (99%), Positives = 210/213 (99%), Gaps = 0/213 (0%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
MIAADD+TE SMMDMARAER ELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG
Sbjct 1 MIAADDETEMSMMDMARAERGELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
VFGLLKRFAKGRIVRANEVGVDEFAGLSPQEL DYVGRHLQPRGLTAGFGGMIALVDGMI
Sbjct 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELVDYVGRHLQPRGLTAGFGGMIALVDGMI 120
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT
Sbjct 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG
Sbjct 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
>gi|240170475|ref|ZP_04749134.1| hypothetical protein MkanA1_14275 [Mycobacterium kansasii ATCC
12478]
Length=213
Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/207 (79%), Positives = 180/207 (87%), Gaps = 0/207 (0%)
Query 6 DDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLL 65
+ T+ +MM MARAERAELA FL TLT QQW TPSLCAGWSVK+VVAHM SYE+L GLL
Sbjct 6 EGTQATMMSMARAERAELAEFLATLTPQQWATPSLCAGWSVKDVVAHMFSYEELSALGLL 65
Query 66 KRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDI 125
KRF KGR+VRANEVGV EF+ L+P EL ++VG+HLQPRGLTA F GMIALVDG IHHQDI
Sbjct 66 KRFVKGRVVRANEVGVQEFSALTPPELLEFVGQHLQPRGLTARFDGMIALVDGTIHHQDI 125
Query 126 RRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEA 185
RRPLGQPRTI A+RL RVL+L+PKNPRL ARPRIKGLRLRATD+DWT G+GPEVTGPGEA
Sbjct 126 RRPLGQPRTIAAERLIRVLQLVPKNPRLGARPRIKGLRLRATDVDWTHGSGPEVTGPGEA 185
Query 186 LLMAMAGRPAAVSDLSGPGKPTLAGRL 212
LLMAMAGR AAV+DL GPG+ TLA RL
Sbjct 186 LLMAMAGRTAAVADLGGPGQRTLAQRL 212
>gi|296166922|ref|ZP_06849339.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897799|gb|EFG77388.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=207
Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/202 (75%), Positives = 171/202 (85%), Gaps = 0/202 (0%)
Query 11 SMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAK 70
++M MAR ERAELA FL TLT QQW+ PSLC+GW+VK+VVAHM+SYE+LG GLL+RFAK
Sbjct 4 TLMSMARDERAELAEFLATLTPQQWDEPSLCSGWTVKDVVAHMVSYEELGTLGLLRRFAK 63
Query 71 GRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLG 130
G IVRAN+VGVDEFAGLS Q+L D++ HLQPRGLTAGFGGMIALVDG IHHQDIRR LG
Sbjct 64 GWIVRANQVGVDEFAGLSGQQLLDFLRAHLQPRGLTAGFGGMIALVDGTIHHQDIRRALG 123
Query 131 QPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
+PR +PA RL RVL L+P NPR+ A RI+GLRLRATD+DW G GP VTGPGEALLMAM
Sbjct 124 RPRRVPADRLVRVLGLLPGNPRIGAGRRIRGLRLRATDVDWEHGRGPGVTGPGEALLMAM 183
Query 191 AGRPAAVSDLSGPGKPTLAGRL 212
AGRPAA++DL GPG TLA RL
Sbjct 184 AGRPAALADLDGPGLDTLAARL 205
>gi|118463200|ref|YP_879520.1| hypothetical protein MAV_0227 [Mycobacterium avium 104]
gi|254773285|ref|ZP_05214801.1| hypothetical protein MaviaA2_01186 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164487|gb|ABK65384.1| conserved hypothetical protein, putative [Mycobacterium avium
104]
gi|336461581|gb|EGO40447.1| hypothetical protein MAPs_29220 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=207
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/204 (72%), Positives = 172/204 (85%), Gaps = 0/204 (0%)
Query 10 KSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFA 69
+M MARAERA+LA FL TL + WE PSLC+ WSVK+VVAH+ISYE+LG FGLLKRFA
Sbjct 3 SELMAMARAERADLAEFLATLGPRDWEAPSLCSRWSVKDVVAHVISYEELGAFGLLKRFA 62
Query 70 KGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPL 129
KG +VRAN+VGVDEFA L+PQ+L +++ HL+PRGLTAGFGGMIALVDG IHHQDIRR L
Sbjct 63 KGWVVRANQVGVDEFADLTPQQLLEFLREHLEPRGLTAGFGGMIALVDGTIHHQDIRRAL 122
Query 130 GQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMA 189
G+PR +P RL RVL L+P NPRL A RI+GLRLRATD+DWT G GP+V+GPGEALLMA
Sbjct 123 GRPRVVPPDRLQRVLSLVPGNPRLGAGRRIRGLRLRATDIDWTHGDGPQVSGPGEALLMA 182
Query 190 MAGRPAAVSDLSGPGKPTLAGRLG 213
M+GRPAA++DL GPG+ TLA RLG
Sbjct 183 MSGRPAALADLDGPGRATLAARLG 206
>gi|41406329|ref|NP_959165.1| hypothetical protein MAP0231c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394677|gb|AAS02548.1| hypothetical protein MAP_0231c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=226
Score = 280 bits (717), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 146/204 (72%), Positives = 172/204 (85%), Gaps = 0/204 (0%)
Query 10 KSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFA 69
+M MARAERA+LA FL TL + WE PSLC+ WSVK+VVAH+ISYE+LG FGLLKRFA
Sbjct 22 SELMAMARAERADLAEFLATLGPRDWEAPSLCSRWSVKDVVAHVISYEELGAFGLLKRFA 81
Query 70 KGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPL 129
KG +VRAN+VGVDEFA L+PQ+L +++ HL+PRGLTAGFGGMIALVDG IHHQDIRR L
Sbjct 82 KGWVVRANQVGVDEFADLTPQQLLEFLREHLEPRGLTAGFGGMIALVDGTIHHQDIRRAL 141
Query 130 GQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMA 189
G+PR +P RL RVL L+P NPRL A RI+GLRLRATD+DWT G GP+V+GPGEALLMA
Sbjct 142 GRPRVVPPDRLQRVLSLVPGNPRLGAGRRIRGLRLRATDIDWTHGDGPQVSGPGEALLMA 201
Query 190 MAGRPAAVSDLSGPGKPTLAGRLG 213
M+GRPAA++DL GPG+ TLA RLG
Sbjct 202 MSGRPAALADLDGPGRATLAARLG 225
>gi|342860049|ref|ZP_08716701.1| hypothetical protein MCOL_14260 [Mycobacterium colombiense CECT
3035]
gi|342132427|gb|EGT85656.1| hypothetical protein MCOL_14260 [Mycobacterium colombiense CECT
3035]
Length=206
Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/202 (67%), Positives = 162/202 (81%), Gaps = 0/202 (0%)
Query 11 SMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAK 70
+MDMARAERA+LA FL TLT Q WE P+LC W+VK+VVAH+ISY++LG GLL+RFAK
Sbjct 3 DLMDMARAERADLAEFLATLTPQDWEAPTLCTRWNVKDVVAHVISYDELGALGLLRRFAK 62
Query 71 GRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLG 130
G IVRAN+VGVDEF +PQ+L +++ HL+P GL AGFGGMIALVDG +HHQDIRR LG
Sbjct 63 GWIVRANQVGVDEFGTRTPQQLLEFLRNHLEPHGLPAGFGGMIALVDGTVHHQDIRRSLG 122
Query 131 QPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
+PR +P RL+R+L L+P NPRL A RI+GL LRATD+ W G GP VTGPGEALL+AM
Sbjct 123 RPRAVPPDRLERILPLVPGNPRLGAGRRIRGLGLRATDVSWAHGDGPGVTGPGEALLLAM 182
Query 191 AGRPAAVSDLSGPGKPTLAGRL 212
GRPAA++DL GPG TLA R+
Sbjct 183 TGRPAALADLEGPGLATLADRV 204
>gi|126436105|ref|YP_001071796.1| hypothetical protein Mjls_3528 [Mycobacterium sp. JLS]
gi|126235905|gb|ABN99305.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=212
Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/204 (68%), Positives = 160/204 (79%), Gaps = 0/204 (0%)
Query 9 EKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRF 68
+ + ++ RAERA+LA FL TLT ++W PSLCAGW+VK+VVAH+ISYEDLGV G L R
Sbjct 4 QAPLTELTRAERADLAEFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFLGRL 63
Query 69 AKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRP 128
KGRI AN+VGV+EF+ LSP EL D++ RHL P GLTA FGGMI VDG IHHQDIRR
Sbjct 64 VKGRITHANQVGVNEFSHLSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDIRRA 123
Query 129 LGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLM 188
L +PRTIPA RL R+L L+P NPRL A RI+GLRLRATD+DWT G GPEV GPGEALLM
Sbjct 124 LDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLRATDVDWTHGDGPEVVGPGEALLM 183
Query 189 AMAGRPAAVSDLSGPGKPTLAGRL 212
AM GRPAA++DL GP K LA RL
Sbjct 184 AMTGRPAALADLDGPAKALLAQRL 207
>gi|108800489|ref|YP_640686.1| hypothetical protein Mmcs_3523 [Mycobacterium sp. MCS]
gi|119869628|ref|YP_939580.1| hypothetical protein Mkms_3596 [Mycobacterium sp. KMS]
gi|108770908|gb|ABG09630.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695717|gb|ABL92790.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=215
Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/204 (68%), Positives = 160/204 (79%), Gaps = 0/204 (0%)
Query 9 EKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRF 68
+ + ++ RAERA+LA FL TLT ++W PSLCAGW+VK+VVAH+ISYEDLGV G L R
Sbjct 4 QAPLTELTRAERADLAGFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFLGRL 63
Query 69 AKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRP 128
KGRI AN+VGV+EF+ LSP EL D++ RHL P GLTA FGGMI VDG IHHQDIRR
Sbjct 64 VKGRITDANQVGVNEFSHLSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDIRRA 123
Query 129 LGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLM 188
L +PRTIPA RL R+L L+P NPRL A RI+GLRLRATD+DWT G GPEV GPGEALLM
Sbjct 124 LDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLRATDVDWTHGDGPEVVGPGEALLM 183
Query 189 AMAGRPAAVSDLSGPGKPTLAGRL 212
AM GRPAA++DL GP K LA RL
Sbjct 184 AMTGRPAALADLDGPAKALLAQRL 207
>gi|291298889|ref|YP_003510167.1| hypothetical protein Snas_1367 [Stackebrandtia nassauensis DSM
44728]
gi|290568109|gb|ADD41074.1| hypothetical protein Snas_1367 [Stackebrandtia nassauensis DSM
44728]
Length=224
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/209 (55%), Positives = 145/209 (70%), Gaps = 2/209 (0%)
Query 6 DDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLL 65
D S M++AR ER ELA FL L+ +QW+ PSLC GW V++VVAH+ISY++L +
Sbjct 7 DAATASRMELARRERTELAGFLAELSDEQWQAPSLCEGWRVRDVVAHVISYDELSRWATA 66
Query 66 KRFAKG--RIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQ 123
+R + + R N +G+ + +P++L D + HL PRGLT FGGM+ALVDG IHHQ
Sbjct 67 RRLLRAGFSLKRGNTIGLAHYESHTPRQLLDALNAHLTPRGLTTAFGGMVALVDGTIHHQ 126
Query 124 DIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPG 183
DIRRPLG PR IP +RL VLRL P ++AR R KGLRL ATD D+ GTGPEV GPG
Sbjct 127 DIRRPLGMPRRIPPERLAVVLRLALGAPPIKARQRAKGLRLVATDCDFVTGTGPEVRGPG 186
Query 184 EALLMAMAGRPAAVSDLSGPGKPTLAGRL 212
EALLM +AGRP S+L+G G+P LAGR+
Sbjct 187 EALLMTLAGRPGVASELAGDGQPILAGRV 215
>gi|331696945|ref|YP_004333184.1| hypothetical protein Psed_3135 [Pseudonocardia dioxanivorans
CB1190]
gi|326951634|gb|AEA25331.1| Conserved hypothetical protein CHP03083 [Pseudonocardia dioxanivorans
CB1190]
Length=207
Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/206 (56%), Positives = 143/206 (70%), Gaps = 1/206 (0%)
Query 8 TEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKR 67
TE + MARAERA+LA FL TLT ++W+ P+LC W+V++VVAHM SY++L +FGL++R
Sbjct 2 TEPDVRTMARAERADLADFLATLTPEEWDAPTLCERWTVRDVVAHMFSYDELSMFGLVRR 61
Query 68 FAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRR 127
A G RAN++GV + SP++L V HL PRGL A FGG IAL D IHHQDIRR
Sbjct 62 LANG-PGRANDIGVAAYRDRSPEQLVALVRDHLDPRGLPAAFGGRIALTDCTIHHQDIRR 120
Query 128 PLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALL 187
PLG+PR IP RL L P ++ARPR++GL L+ATDL+W G GP V GP E+LL
Sbjct 121 PLGRPREIPPDRLRVALDYALFAPPIKARPRVRGLTLQATDLEWRSGAGPLVEGPAESLL 180
Query 188 MAMAGRPAAVSDLSGPGKPTLAGRLG 213
MA AGR +LSGPG PTLA R+
Sbjct 181 MAAAGRAGVTDELSGPGVPTLAERIA 206
>gi|331698120|ref|YP_004334359.1| hypothetical protein Psed_4347 [Pseudonocardia dioxanivorans
CB1190]
gi|326952809|gb|AEA26506.1| Conserved hypothetical protein CHP03083 [Pseudonocardia dioxanivorans
CB1190]
Length=208
Score = 220 bits (561), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/212 (57%), Positives = 144/212 (68%), Gaps = 6/212 (2%)
Query 1 MIAADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG 60
M A DT+ MARAER +LAAFL TLT ++W+ P+LC W V++VVAHM SY+DL
Sbjct 1 MTATKPDTKA----MARAEREDLAAFLATLTPEEWDAPTLCTRWRVRDVVAHMFSYDDLR 56
Query 61 VFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
L+ R AKG AN++GVD+ SP EL V HL PRGLTAGFG IAL DG I
Sbjct 57 PLALVGRLAKGSGA-ANDIGVDQLGDRSPDELLALVRTHLTPRGLTAGFGARIALTDGTI 115
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVT 180
HHQDIRRPLG+PR IP RL L P ++A+ R++GL L+ATDLDW G GP V
Sbjct 116 HHQDIRRPLGRPREIPNDRLRVALDYARTAPPIKAKARVRGLTLQATDLDWRCGDGPVVE 175
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRL 212
GPGE+LLMAMAGRP A +L+GPG+ LA R+
Sbjct 176 GPGESLLMAMAGRPVA-DELTGPGRTMLAERI 206
>gi|226360345|ref|YP_002778123.1| hypothetical protein ROP_09310 [Rhodococcus opacus B4]
gi|226238830|dbj|BAH49178.1| hypothetical protein [Rhodococcus opacus B4]
Length=207
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/203 (57%), Positives = 137/203 (68%), Gaps = 2/203 (0%)
Query 13 MDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGR 72
M +ARAER E A L L+ QQWE+PSLC W V++V AH+ISY++L + GLL RF KG
Sbjct 4 MTLARAEREEFAELLAGLSPQQWESPSLCERWRVRDVAAHVISYDELDLRGLLLRFGKGW 63
Query 73 IV--RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLG 130
+ RAN +GV + A + EL D + H +P GL AGFGGMI LVDGMIH QDIRRPL
Sbjct 64 FLQDRANALGVADLADRTTDELVDSMRLHAEPSGLPAGFGGMIGLVDGMIHQQDIRRPLA 123
Query 131 QPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
PRTIP RL L P +R R +G+RL ATDLDW+ G GP+V G GEALLMAM
Sbjct 124 IPRTIPQDRLRAALDFARFAPLIRGAWRARGVRLVATDLDWSHGRGPQVRGSGEALLMAM 183
Query 191 AGRPAAVSDLSGPGKPTLAGRLG 213
AGR A+ DL+GPG+ T A LG
Sbjct 184 AGRRDALGDLAGPGRSTFAAHLG 206
>gi|317506146|ref|ZP_07963969.1| hypothetical protein HMPREF9336_00338 [Segniliparus rugosus ATCC
BAA-974]
gi|316255568|gb|EFV14815.1| hypothetical protein HMPREF9336_00338 [Segniliparus rugosus ATCC
BAA-974]
Length=205
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/203 (55%), Positives = 131/203 (65%), Gaps = 2/203 (0%)
Query 11 SMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAK 70
+ MD A AERA+ AAFL TLT +QWE P+LC W V++VVAH+ISYE LG L KRF
Sbjct 2 TAMDFAEAERADFAAFLGTLTPEQWEAPTLCGKWRVRDVVAHVISYEGLGASELAKRFLA 61
Query 71 G--RIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRP 128
G + R NE V G S +EL G L+P G+ +GG AL DGMIHHQDIRR
Sbjct 62 GGLSVDRINEAEVARARGQSTRELLARFGASLRPNGMMTLYGGRAALHDGMIHHQDIRRS 121
Query 129 LGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLM 188
LG R IPA RL L +P LR R++G+RL ATDLDW+ G GPE G GEALLM
Sbjct 122 LGLRREIPADRLRATLNFTLVSPTLRGAWRVRGVRLVATDLDWSWGRGPEARGAGEALLM 181
Query 189 AMAGRPAAVSDLSGPGKPTLAGR 211
AMAGR +A+ +LSGPG L+ R
Sbjct 182 AMAGRSSALGELSGPGAAKLSAR 204
>gi|118615988|ref|YP_904320.1| hypothetical protein MUL_0076 [Mycobacterium ulcerans Agy99]
gi|118568098|gb|ABL02849.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=219
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/193 (52%), Positives = 137/193 (71%), Gaps = 0/193 (0%)
Query 13 MDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGR 72
++MA AER ELA L TLT +QWE SLC W V++VVAH++S++D + G+ R +GR
Sbjct 4 LEMATAERTELADLLATLTPEQWEAQSLCERWRVRDVVAHVMSFDDASLLGMFGRVIRGR 63
Query 73 IVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
I+ AN+V VDE A LS ++L D + L+PRGL FGG +AL+D +HHQDIRRPLG P
Sbjct 64 IIDANQVWVDELASLSTEQLLDQLRARLRPRGLATTFGGRLALLDVTMHHQDIRRPLGLP 123
Query 133 RTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAG 192
R IPA+RL VL ++P L +G+RL +DLDW+ G+GPE+TG EA+LMA++G
Sbjct 124 RQIPAERLRCVLGDSLRSPELPGWHLARGVRLTTSDLDWSHGSGPELTGSAEAVLMAVSG 183
Query 193 RPAAVSDLSGPGK 205
R +A+ +L+GPG+
Sbjct 184 RHSAIGELAGPGQ 196
>gi|326334012|ref|ZP_08200241.1| hypothetical protein NBCG_05443 [Nocardioidaceae bacterium Broad-1]
gi|325948161|gb|EGD40272.1| hypothetical protein NBCG_05443 [Nocardioidaceae bacterium Broad-1]
Length=211
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 138/200 (69%), Gaps = 2/200 (1%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIV 74
+A AER +LA FL TLT +QW+ PSLC+GW+V++VVAH+ISYE++G+ G + RFA+
Sbjct 8 LATAERRDLADFLETLTPEQWDQPSLCSGWTVRDVVAHLISYEEVGLAGFIGRFARQGFS 67
Query 75 RA--NEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
N+ ++EF +P EL YV H +P G TA I L DG+IHHQDIRR LG+P
Sbjct 68 FGTMNQRRLEEFGSRTPDELVAYVRAHAKPSGPTAVADARIGLTDGLIHHQDIRRALGRP 127
Query 133 RTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAG 192
R +P +RL VL P L A+ +GLRL ATDLDW+ G+G EVTGPGEALLMA+ G
Sbjct 128 RQVPTERLVPVLGFAMIAPPLPAKRNGQGLRLVATDLDWSRGSGEEVTGPGEALLMAVCG 187
Query 193 RPAAVSDLSGPGKPTLAGRL 212
R A+ +L+GPG TLAGR+
Sbjct 188 RADALPELTGPGLGTLAGRV 207
>gi|169628674|ref|YP_001702323.1| hypothetical protein MAB_1584 [Mycobacterium abscessus ATCC 19977]
gi|169240641|emb|CAM61669.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=207
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/202 (55%), Positives = 133/202 (66%), Gaps = 2/202 (0%)
Query 10 KSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFA 69
+S M++ARAER +LA FL LT +QW+ PSLC W V++VV HMI YEDL R A
Sbjct 2 QSAMELARAERIDLADFLAGLTAEQWDAPSLCTQWRVRDVVTHMIGYEDLSRAEFYSRVA 61
Query 70 KGRIV--RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRR 127
K +AN V E AG +PQEL V P LT+GFGG IAL+DG+IH QDIRR
Sbjct 62 KAGFNPNKANANRVAELAGRTPQELLAMVRAAQTPGVLTSGFGGRIALLDGIIHQQDIRR 121
Query 128 PLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALL 187
PLG PR IP RL + P +R R +G+RL ATDLDW+ G+GPEVTGP EALL
Sbjct 122 PLGMPRQIPGDRLTVAMDFARWAPPVRGALRARGVRLVATDLDWSRGSGPEVTGPAEALL 181
Query 188 MAMAGRPAAVSDLSGPGKPTLA 209
MAMA RP A+++L GPGK TLA
Sbjct 182 MAMAARPCALAELEGPGKSTLA 203
>gi|302528963|ref|ZP_07281305.1| predicted protein [Streptomyces sp. AA4]
gi|302437858|gb|EFL09674.1| predicted protein [Streptomyces sp. AA4]
Length=212
Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/199 (54%), Positives = 135/199 (68%), Gaps = 2/199 (1%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKG--R 72
+AR ERA+ A FL TLT QW+ P+LCAGW+V+ VVAH++SY++L L +RF +
Sbjct 10 LAREERADFADFLETLTPDQWDRPTLCAGWNVRSVVAHVVSYDELSGRQLAQRFVRAGLS 69
Query 73 IVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
+ R NE+G+ E+ G +P+EL + RH QP + FGGMI +DG+IH QDIRRPLG P
Sbjct 70 LRRCNEIGLAEYRGRAPEELIGVLRRHPQPGRILGRFGGMIGFLDGLIHQQDIRRPLGLP 129
Query 133 RTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAG 192
RTIPA RL R L L + P + R+ GLR ATDLDWT G G EV GPGEALL+A+AG
Sbjct 130 RTIPAVRLRRALELSLRAPPIGVSRRLTGLRAVATDLDWTSGNGIEVRGPGEALLLALAG 189
Query 193 RPAAVSDLSGPGKPTLAGR 211
R AA DL+GPG L R
Sbjct 190 RRAAADDLTGPGLDVLISR 208
>gi|326382733|ref|ZP_08204423.1| hypothetical protein SCNU_07338 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198323|gb|EGD55507.1| hypothetical protein SCNU_07338 [Gordonia neofelifaecis NRRL
B-59395]
Length=204
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/203 (49%), Positives = 119/203 (59%), Gaps = 2/203 (0%)
Query 13 MDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGR 72
M MA+ ER ELA+FL+TLT WE PSLC GW V++V AH++SY+ L L R +G
Sbjct 1 MTMAQVEREELASFLSTLTPDDWEQPSLCDGWRVRDVAAHIVSYDTLDAQSLATRLRRGH 60
Query 73 IVR--ANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLG 130
+N GVD GL+P E+ + R +PRGLTA FGG +AL+D MIH QDIRR L
Sbjct 61 FTLDGSNAAGVDASQGLTPPEILETFSRSTRPRGLTAAFGGRVALLDTMIHQQDIRRALA 120
Query 131 QPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
PRTIP RL L L R +GL L TDLDW G G EV GP E LLM +
Sbjct 121 CPRTIPTDRLRAALSFSRIALALGQPWRTRGLSLITTDLDWRSGFGKEVRGPAEPLLMTI 180
Query 191 AGRPAAVSDLSGPGKPTLAGRLG 213
AGR +L+G G L R+G
Sbjct 181 AGRRGCARELTGVGVGVLRRRIG 203
>gi|169631861|ref|YP_001705510.1| hypothetical protein MAB_4788c [Mycobacterium abscessus ATCC
19977]
gi|169243828|emb|CAM64856.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=207
Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/200 (45%), Positives = 120/200 (60%), Gaps = 6/200 (3%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYED--LGVFGLLKRFAKGR 72
M + E+ +LAA L LT Q+WE+PSLCAGW V++VVAH++ Y+ L +G +G
Sbjct 9 MVQQEKRDLAALLRELTPQEWESPSLCAGWRVRDVVAHVL-YDGTPLLRYGSEVIRVRGS 67
Query 73 IVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
R N + +D G S +EL + R +A + L D +IH QDIRRPL +
Sbjct 68 ADRLNRLYLDRARGWSTEELLAAFEATIA-RSYSARIQPKLVLADLLIHQQDIRRPLNRL 126
Query 133 RTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAG 192
RT+P L VL +P + + R+KGLR ATD+ WT GTGPEV GPGEA++MA+ G
Sbjct 127 RTVPEGTLRMVLD--NPDPFINPKRRLKGLRWTATDIQWTDGTGPEVHGPGEAIVMAVGG 184
Query 193 RPAAVSDLSGPGKPTLAGRL 212
RPAA++ L GPG L RL
Sbjct 185 RPAALAQLDGPGVEILRTRL 204
>gi|326778379|ref|ZP_08237644.1| hypothetical protein CHP03083 [Streptomyces cf. griseus XylebKG-1]
gi|326658712|gb|EGE43558.1| hypothetical protein CHP03083 [Streptomyces griseus XylebKG-1]
Length=212
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/208 (39%), Positives = 114/208 (55%), Gaps = 5/208 (2%)
Query 7 DTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLK 66
+ ++ + M AERA L L L QWETPSLCAGW+V +V AH++ G +
Sbjct 4 EAKRGIWRMVHAERAALIEDLARLEPGQWETPSLCAGWTVHDVAAHLVDTALTTRIGFVV 63
Query 67 RFAKGRIV--RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQD 124
A+ R N GV+ G SPQE + + R + R T LV+ ++H +D
Sbjct 64 GLARARFDFDLQNARGVERERGASPQETLERL-RRVASRTTTPPAPLDTRLVEEVVHGED 122
Query 125 IRRPLGQPRTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGP 182
IRR +G R+ P + + R LRL + P A+ + +RL ATD D +IG GP+ TGP
Sbjct 123 IRRAVGPVRSYPLEAVVRALRLQARTPESFGGAKETVATVRLTATDADLSIGEGPDATGP 182
Query 183 GEALLMAMAGRPAAVSDLSGPGKPTLAG 210
+LL+A++GR AV +LSGPG LAG
Sbjct 183 ALSLLLAVSGRRQAVEELSGPGVGLLAG 210
>gi|182437745|ref|YP_001825464.1| hypothetical protein SGR_3952 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466261|dbj|BAG20781.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length=230
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/212 (38%), Positives = 115/212 (55%), Gaps = 5/212 (2%)
Query 3 AADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVF 62
A + ++ + M AERA L L L QWETPSLCAGW+V +V AH++
Sbjct 18 AVKIEAKRGIWRMVHAERAALIEDLARLEPGQWETPSLCAGWTVHDVAAHLVDTALTTRI 77
Query 63 GLLKRFAKGRIV--RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
G + A+ R N GV+ G SPQE + + R + R LV+ ++
Sbjct 78 GFVVGLARARFDFDLQNARGVERERGASPQETLERL-RRVASRTTAPPAPLDTRLVEEVV 136
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPE 178
H +DIRR +G R+ P + + R LRL + P A+ + +RL ATD D +IG GP+
Sbjct 137 HGEDIRRAVGLVRSYPLEAVVRALRLQARTPESFGGAKETVATVRLTATDADLSIGEGPD 196
Query 179 VTGPGEALLMAMAGRPAAVSDLSGPGKPTLAG 210
TGP +LL+A++GR AV++L+GPG LAG
Sbjct 197 ATGPVLSLLLAVSGRRQAVAELTGPGVGLLAG 228
>gi|226366110|ref|YP_002783893.1| hypothetical protein ROP_67010 [Rhodococcus opacus B4]
gi|226244600|dbj|BAH54948.1| hypothetical protein [Rhodococcus opacus B4]
Length=207
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/202 (39%), Positives = 107/202 (53%), Gaps = 5/202 (2%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIV 74
M ERA L L L +W+ PSLC W+V +VVAH++ G + A+ R
Sbjct 7 MVHVERAALIDDLENLDAGRWDEPSLCGDWTVHDVVAHLVDTARTTRLGFVVGLARARFD 66
Query 75 --RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
R N GV+ G SPQE + + R R T LV+ ++H +DIRRPLG
Sbjct 67 FDRQNARGVERQRGASPQETLERL-RRAASRTSTPSAPLDSRLVEEVVHGEDIRRPLGLT 125
Query 133 RTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
R+ PA+ + R LRL + P A+ + +RL A D D +IG GPEV+G +LL+A+
Sbjct 126 RSYPAEAVVRSLRLQTRTPASMGGAKELVARVRLTAVDADVSIGDGPEVSGTALSLLLAV 185
Query 191 AGRPAAVSDLSGPGKPTLAGRL 212
+GR A+ DL GPG LA L
Sbjct 186 SGRTVALDDLDGPGVDALAAAL 207
>gi|111017805|ref|YP_700777.1| hypothetical protein RHA1_ro00784 [Rhodococcus jostii RHA1]
gi|110817335|gb|ABG92619.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=214
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/198 (39%), Positives = 111/198 (57%), Gaps = 5/198 (2%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIV 74
+ AERA L LT LT QW+ PSLC W+V +V AH+I+ G+++ A+ R
Sbjct 17 IVHAERAALIDDLTDLTDDQWDHPSLCGDWTVHDVAAHLINNAKTTRLGIVRNMARARFN 76
Query 75 --RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
R N GV+ G +P++ + + + R T LV+ ++H +DIRRPLG
Sbjct 77 FDRQNAQGVERERGATPRQTLARL-QQVATRTSTPPAPLDSRLVEEVVHGEDIRRPLGIN 135
Query 133 RTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
R P++ + R LR + P A+ I ++LRATD D +IG GPEV GP +LLMA+
Sbjct 136 RIYPSEAVVRSLRYQARTPVSLGGAKQLIDSVQLRATDADVSIGDGPEVCGPALSLLMAI 195
Query 191 AGRPAAVSDLSGPGKPTL 208
+GR +A+ DL GPG L
Sbjct 196 SGRKSALGDLDGPGVSAL 213
>gi|120406339|ref|YP_956168.1| hypothetical protein Mvan_5391 [Mycobacterium vanbaalenii PYR-1]
gi|119959157|gb|ABM16162.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=167
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/166 (43%), Positives = 96/166 (58%), Gaps = 3/166 (1%)
Query 46 VKEVVAHMISYEDLGVFGLLKRFAKGR--IVRANEVGVDEFAGLSPQELADYVGRHLQPR 103
+++V AH + Y V GL++ + R + R N + A L+P EL + +GR P
Sbjct 1 MRDVAAHTVGYLGQSVPGLIRNMIRDRGDVDRLNARMLPAVAALTPAELVELMGRDSTPT 60
Query 104 GLTAGFGGMIALVDGMIHHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLR 163
G +GG +AL++ +IH QDIRRPLG +P L L +P + R +GLR
Sbjct 61 GAAGLYGGRVALIECVIHQQDIRRPLGLDFDVPEDSLRVSLDYARISPVIGGTRRTRGLR 120
Query 164 LRATDLDWTIGTGPEVTGPGEALLMAMAGRPAAV-SDLSGPGKPTL 208
L ATD+DW+ GTGPEV G EALL+AM GR AV ++LSG G P L
Sbjct 121 LVATDMDWSAGTGPEVCGTAEALLLAMTGRADAVRAELSGEGIPHL 166
>gi|315506267|ref|YP_004085154.1| hypothetical protein ML5_5542 [Micromonospora sp. L5]
gi|315412886|gb|ADU11003.1| hypothetical protein ML5_5542 [Micromonospora sp. L5]
Length=215
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/214 (39%), Positives = 109/214 (51%), Gaps = 6/214 (2%)
Query 4 ADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFG 63
+D T + +A AERA LA L L QW PSLC+ W+V+E +AHM + +G
Sbjct 2 SDTLTRSELWALAHAERAALADDLAGLDAAQWARPSLCSRWTVEETLAHMTAAASIGRVR 61
Query 64 LLKRFAKGRIVR--ANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIA-LVDGMI 120
L R N+ + E G P E D R + R T+ FG A L + ++
Sbjct 62 WLASVLGARFDFDLHNDRRLAEHQGADPGERLDRFRRII--RSTTSTFGPTEAWLGEVVV 119
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMP-KNPRLRARPRIKGLRLRATDLDWTIGTGPEV 179
H QDIRRPLG RT + + V R ++ + R I GLR+ ATD +T G GP V
Sbjct 120 HAQDIRRPLGLTRTPSVEAVTPVARFYAGRDFTVAGRSAIDGLRVEATDGPFTAGAGPLV 179
Query 180 TGPGEALLMAMAGRPAAVSDLSGPGKPTLAGRLG 213
+G AL+MAMAGR A DL+GPG P L R
Sbjct 180 SGTTLALMMAMAGRAAYCDDLTGPGVPALRERCA 213
>gi|240169227|ref|ZP_04747886.1| hypothetical protein MkanA1_07934 [Mycobacterium kansasii ATCC
12478]
Length=209
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/205 (40%), Positives = 103/205 (51%), Gaps = 20/205 (9%)
Query 19 ERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG--VFGL--------LKRF 68
ER LA L TLT QW+TPSLC GW+V++VVAH+ + L F L +F
Sbjct 11 ERGALADALATLTPSQWDTPSLCTGWTVRDVVAHLSATASLNPATFFLALARAGFNFDKF 70
Query 69 AKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRP 128
A G+I A G D A L +E P G + G I ++H +DIRRP
Sbjct 71 ADGQI--AKRRGPDAAATL--EEFRRLQHSTSAPPGPKTSWLGEI-----VVHGEDIRRP 121
Query 129 LGQPRTIPAQRLDRVLRLMP-KNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALL 187
LG P + +V+ N + ++ RI GL LRATD DW G G V GP +LL
Sbjct 122 LGISHAYPPDAVAQVIDFYKGSNMLIGSKSRISGLALRATDHDWHHGQGDRVEGPLLSLL 181
Query 188 MAMAGRPAAVSDLSGPGKPTLAGRL 212
+A GR A DL+GPG PTL R
Sbjct 182 LATTGRVAGCDDLTGPGVPTLRSRC 206
>gi|302867327|ref|YP_003835964.1| hypothetical protein Micau_2854 [Micromonospora aurantiaca ATCC
27029]
gi|302570186|gb|ADL46388.1| hypothetical protein Micau_2854 [Micromonospora aurantiaca ATCC
27029]
Length=215
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/213 (39%), Positives = 109/213 (52%), Gaps = 6/213 (2%)
Query 4 ADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFG 63
+D T + +A AERA LA L L QW PSLC+ W+V+E +AHM + +G
Sbjct 2 SDTLTRSELWALAHAERAALADDLAGLDAAQWARPSLCSRWTVEETLAHMTAAASIGRVR 61
Query 64 LLKRFAKGRIVR--ANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIA-LVDGMI 120
L R N+ + E G P E D R + T+ FG A L + ++
Sbjct 62 WLASVLGARFDFDLHNDRRLAEHRGADPGETLDRFRRIIG--STTSTFGPTEAWLGEVVV 119
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMP-KNPRLRARPRIKGLRLRATDLDWTIGTGPEV 179
H QDIRRPLG RT + + V R ++ + R I GLR+ ATD +T GTGP V
Sbjct 120 HAQDIRRPLGLTRTPSVEAVTPVARFYAGRDFTVAGRSAIDGLRVEATDGPFTAGTGPLV 179
Query 180 TGPGEALLMAMAGRPAAVSDLSGPGKPTLAGRL 212
+G AL+MAMAGR A DL+GPG P L R
Sbjct 180 SGTTLALMMAMAGRAAYCDDLTGPGVPALRERC 212
>gi|291301966|ref|YP_003513244.1| hypothetical protein Snas_4506 [Stackebrandtia nassauensis DSM
44728]
gi|290571186|gb|ADD44151.1| hypothetical protein Snas_4506 [Stackebrandtia nassauensis DSM
44728]
Length=219
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/204 (38%), Positives = 103/204 (51%), Gaps = 4/204 (1%)
Query 12 MMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKG 71
+ D+A AER +LA +L TL QW T +LC W+V +++AH+ V L K
Sbjct 17 LADLA-AERLDLADYLETLDDSQWRTTTLCPAWNVHQMLAHLTLSNRTKVLPTLWHVVKA 75
Query 72 R--IVRAN-EVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRP 128
R R E+ A S EL + A G + LVD ++H QDI RP
Sbjct 76 RGDFDRVEAELADTRAATYSRAELLAQLRETAAADRRLALAGKLDPLVDILVHGQDITRP 135
Query 129 LGQPRTIPAQRLDRVLRLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLM 188
LG R +P R+ L + + +R R KGLR ATD DW+ G GPEV GP +L+
Sbjct 136 LGHHRPMPVHRVVPALEHVWGSVFYGSRKRFKGLRFVATDADWSAGEGPEVRGPVGDILL 195
Query 189 AMAGRPAAVSDLSGPGKPTLAGRL 212
A GR A + LSGPG+ AGR+
Sbjct 196 AATGRAAGLDALSGPGRTEAAGRM 219
>gi|239988866|ref|ZP_04709530.1| hypothetical protein SrosN1_16262 [Streptomyces roseosporus NRRL
11379]
gi|291445858|ref|ZP_06585248.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291348805|gb|EFE75709.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=213
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/210 (36%), Positives = 110/210 (53%), Gaps = 5/210 (2%)
Query 5 DDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGL 64
+ D ++ + M AERA L L L QW T SLCAGW+V +V AH++ G
Sbjct 2 NSDAKRGIWSMVHAERAALVDDLAGLDAGQWATLSLCAGWTVHDVAAHLVDTALTTRIGF 61
Query 65 LKRFAKGRIV--RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHH 122
+ + R N GV+ G +P + + + R + R T LV+ ++H
Sbjct 62 VAGLVRARFDFDLQNARGVELRRGATPAQTLERL-RRVVSRTTTPPASLDTRLVEEVVHG 120
Query 123 QDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVT 180
+DIRR +G RT P + + R LRL + P A+ + +RL ATD D +IG G EV
Sbjct 121 EDIRRAVGLARTYPREAVVRALRLQVRTPASFGGAKEAVASVRLTATDADLSIGEGAEVA 180
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAG 210
GP +LL+A++GR A+ +L GPG ++AG
Sbjct 181 GPALSLLLAVSGRRVALDELDGPGVGSIAG 210
>gi|320007365|gb|ADW02215.1| hypothetical protein Sfla_0753 [Streptomyces flavogriseus ATCC
33331]
Length=228
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/211 (37%), Positives = 110/211 (53%), Gaps = 5/211 (2%)
Query 3 AADDDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVF 62
+A++ + + AERA L L +L QWE PSLC+GW+V +VVAH++
Sbjct 16 SAEEVAVNDVWPLVHAERAALVGDLESLDDGQWEEPSLCSGWTVHDVVAHLVDTARTTRL 75
Query 63 GLLKRFAKGR--IVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMI 120
G L A R R N GV+ SP++ + + R R T LV+ ++
Sbjct 76 GFLLGLAGARFDFDRQNARGVERERCASPRDTLERL-RQAAARTSTPPAPLDSRLVEEIV 134
Query 121 HHQDIRRPLGQPRTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPE 178
H +DIRRPLG R+ P + + R LRL + P AR + RL A+D +IG GPE
Sbjct 135 HGEDIRRPLGIARSYPREAVVRSLRLQVRTPASFGGARELVARTRLTASDAGLSIGEGPE 194
Query 179 VTGPGEALLMAMAGRPAAVSDLSGPGKPTLA 209
V GP +LL+A++ R A+ DL GPG LA
Sbjct 195 VCGPALSLLLAVSRRRVALDDLGGPGLSALA 225
>gi|111023676|ref|YP_706648.1| hypothetical protein RHA1_ro06718 [Rhodococcus jostii RHA1]
gi|110823206|gb|ABG98490.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=207
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/194 (39%), Positives = 104/194 (54%), Gaps = 5/194 (2%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIV 74
M AER L +L +W+ PSL W+V +VVAH++ G + A+ R
Sbjct 7 MVHAERVALVDDRGSLDAARWDEPSLGGEWTVHDVVAHLVDTARTTRLGFMVGLARARFD 66
Query 75 --RANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
R N GV+ G SPQE + R + R T LV+ ++H +DIRRPLG
Sbjct 67 FDRQNARGVERERGASPQETLARL-RRVASRTSTPPAPLDSRLVEEIVHGEDIRRPLGLT 125
Query 133 RTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
R+ PA+ +DR LRL + P AR + +RL A D + +IG GPEV+G +LL+A+
Sbjct 126 RSYPAEAVDRSLRLQTRTPASFGGARELVARVRLTAADTEVSIGEGPEVSGTALSLLLAV 185
Query 191 AGRPAAVSDLSGPG 204
+GR A+ DL GPG
Sbjct 186 SGRRVALDDLDGPG 199
>gi|284033136|ref|YP_003383067.1| hypothetical protein Kfla_5254 [Kribbella flavida DSM 17836]
gi|283812429|gb|ADB34268.1| hypothetical protein Kfla_5254 [Kribbella flavida DSM 17836]
Length=209
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/207 (38%), Positives = 103/207 (50%), Gaps = 6/207 (2%)
Query 10 KSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFA 69
+ + AER LA L LT +QW TPSLC GWSV++V AH+IS V ++
Sbjct 4 EEIWTYVEAERVSLAELLAGLTAEQWRTPSLCPGWSVQDVAAHVISSPQARVLPVVAGMV 63
Query 70 KGRIVRANEVGVDEF----AGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDI 125
+ R N DE A SP E+ R+ R G M L+D +IH QDI
Sbjct 64 RAR-GDFNRFVFDEARRAGATYSPGEILAQYDRYAGSRRRPVGTVPMDPLLDVLIHGQDI 122
Query 126 RRPLGQPRTIPAQRLDRVL-RLMPKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGE 184
PLG R +P + R+ K+ +AR R G+RL ATD+DW+ G+G E+ GP
Sbjct 123 AVPLGIRRLMPPEAARAAADRIWVKSFPFKARRRFAGVRLVATDVDWSAGSGAELRGPIA 182
Query 185 ALLMAMAGRPAAVSDLSGPGKPTLAGR 211
ALL ++GR L+G G L R
Sbjct 183 ALLQLLSGRTHVTPQLTGSGVSHLTDR 209
>gi|296140772|ref|YP_003648015.1| hypothetical protein Tpau_3084 [Tsukamurella paurometabola DSM
20162]
gi|296028906|gb|ADG79676.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=209
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/203 (38%), Positives = 105/203 (52%), Gaps = 6/203 (2%)
Query 15 MARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGR-- 72
M AER L FL+T+ +W+TPSLC GWSV++V AH IS G ++ R
Sbjct 7 MVHAERRALIDFLSTVDESRWDTPSLCPGWSVRDVTAHQISTAKTTRLGFVRGMITARFD 66
Query 73 IVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP 132
R N GV+ G + Q LA + R + T LV+ ++H +DIRRPLG
Sbjct 67 FDRDNLNGVERERGTAAQMLAAF--RAVADATATPPAPLDTRLVEAIVHGEDIRRPLGAI 124
Query 133 RTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
P + R LRL + A+ + GLRL A D D G G EV G ALL+A+
Sbjct 125 GDYPLWAVIRALRLQARTSTAMGGAKQHLTGLRLVADDSDLVFGDGAEVAGHTLALLLAV 184
Query 191 AGRPAAVSDLSGPGKPTLAGRLG 213
+GR A+++L+G G L+ R+G
Sbjct 185 SGRTIALAELTGSGLAELSSRVG 207
>gi|148271498|ref|YP_001221059.1| hypothetical protein CMM_0319 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829428|emb|CAN00341.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length=221
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/202 (40%), Positives = 105/202 (52%), Gaps = 13/202 (6%)
Query 19 ERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIV--RA 76
ER L+A L+T+ + W SLCAGW V +VVAH+I +G +R R R
Sbjct 21 ERRSLSADLSTIPAEGWAVGSLCAGWDVHDVVAHLIDSAATTRWGFARRMVAARFDFDRD 80
Query 77 NEVGVDEFAGLSP-QELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQPRTI 135
N VGV+ +SP + LA++ + P T LV+ ++H +D+RRPLG R
Sbjct 81 NAVGVERERRMSPAKTLAEF--DRVAPWTRTPPAALASRLVEAVVHAEDVRRPLGVRRDY 138
Query 136 PAQRLDRVLRLMPKNPRLRA-----RPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
P L VL + R R R GLRL A D D + G GPEV G ALLMA+
Sbjct 139 P---LGHVLPALTHQLRTSGAMGGGRDRAAGLRLIADDADLSWGGGPEVHGSALALLMAV 195
Query 191 AGRPAAVSDLSGPGKPTLAGRL 212
+GRP A +LSGPG LA R+
Sbjct 196 SGRPVAPGELSGPGARDLAQRV 217
>gi|309813026|ref|ZP_07706754.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
gi|308433098|gb|EFP57002.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
Length=209
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/209 (40%), Positives = 103/209 (50%), Gaps = 11/209 (5%)
Query 8 TEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKR 67
T KS+ D ER L L L+ QW PSLC WSV++VVAH+ S K+
Sbjct 6 TWKSVHD----ERESLLEDLAGLSDAQWRAPSLCEDWSVQQVVAHLASSARTSKASAAKQ 61
Query 68 F--AKGRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDI 125
KG + + GV F+G +P E + + R A F AL + ++H +DI
Sbjct 62 MLTHKGNVQAVIDAGVARFSGGTPAETLEAFRESMHER--VAPFSAEAALGEVVVHAEDI 119
Query 126 RRPLGQPRTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPG 183
RR L T PA+ L R L K+ L A RIKGL L ATD W G G V+GP
Sbjct 120 RRALDIEHTYPAETL-RQLADHYKDAGLGMGAGDRIKGLHLMATDQKWETGKGDVVSGPI 178
Query 184 EALLMAMAGRPAAVSDLSGPGKPTLAGRL 212
AL+M M GR A + DLSG G T RL
Sbjct 179 IALIMTMLGRTAYLDDLSGDGVETYRARL 207
>gi|226363411|ref|YP_002781193.1| hypothetical protein ROP_40010 [Rhodococcus opacus B4]
gi|226241900|dbj|BAH52248.1| hypothetical protein [Rhodococcus opacus B4]
Length=210
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/204 (39%), Positives = 104/204 (51%), Gaps = 18/204 (8%)
Query 19 ERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIVRANE 78
ER L L LT QW TPSLC W+V++V AHM + E + + + G R N
Sbjct 13 ERRALVDDLEPLTDTQWSTPSLCERWTVRDVFAHMTATEKMTPPKFVGKLV-GSGFRINT 71
Query 79 VGVDEFA----GLSPQELADY---VGRHLQPRG-LTAGFGGMIALVDGMIHHQDIRRPLG 130
+ + A G Q L ++ + P G + A G MI +H +DIRRPLG
Sbjct 72 MFEKDIAHEEEGTPAQSLDEFRAHMADSTHPPGPIDAMLGEMI------VHGEDIRRPLG 125
Query 131 QPRTIPAQRLDRVLRLMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLM 188
P + RV KN L ++ R+ GL LRATD DWT G+GPEV+GP AL++
Sbjct 126 IAHEYPMDAVVRVADFY-KNSNLLIGSKSRVAGLTLRATDTDWTTGSGPEVSGPMLALVL 184
Query 189 AMAGRPAAVSDLSGPGKPTLAGRL 212
AM GR AA+ +LSG G L L
Sbjct 185 AMTGRRAALDELSGDGLDQLKSAL 208
>gi|84494513|ref|ZP_00993632.1| hypothetical protein JNB_06944 [Janibacter sp. HTCC2649]
gi|84384006|gb|EAP99886.1| hypothetical protein JNB_06944 [Janibacter sp. HTCC2649]
Length=204
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/203 (37%), Positives = 99/203 (49%), Gaps = 13/203 (6%)
Query 14 DMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRI 73
DM +AER L A L+ + QW SLC W+V+ V AH++ FG++ A+ R
Sbjct 6 DMVQAEREALVADLSGIKEDQWAEQSLCGDWTVRGVAAHLVDNALTTRFGIVVAMARARF 65
Query 74 V--RANEVGVDEFAGLSP----QELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRR 127
R N +GV G SP L V R P LV+ ++H +DIRR
Sbjct 66 DFDRQNAMGVARALGDSPAATLSNLRGVVDRRTGPPAPVDS-----RLVEEVVHGEDIRR 120
Query 128 PLGQPRTIPAQRLDRVLRLMPKNPRLRA--RPRIKGLRLRATDLDWTIGTGPEVTGPGEA 185
PLG ++R L + P + RI G+RL ATD D IG GP+V GP +
Sbjct 121 PLGITHAYATDAVERSLVHQARTPVSLGGGKQRIAGVRLSATDSDLVIGDGPDVVGPTLS 180
Query 186 LLMAMAGRPAAVSDLSGPGKPTL 208
LL+ +GR AA DL GPG P L
Sbjct 181 LLLVTSGRDAARVDLDGPGVPHL 203
>gi|111021107|ref|YP_704079.1| hypothetical protein RHA1_ro04125 [Rhodococcus jostii RHA1]
gi|110820637|gb|ABG95921.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=210
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/203 (36%), Positives = 100/203 (50%), Gaps = 14/203 (6%)
Query 19 ERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIVRANE 78
ER L L LT QW TPSLC W+V++V AH+ + E + + + G R N
Sbjct 13 ERRALVDDLEPLTDTQWSTPSLCERWTVRDVFAHITATEKMTPPKFVGKLV-GSGFRINT 71
Query 79 VGVDEFA-------GLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQ 131
+ + A S E ++G P G G I ++H +DIRRPLG
Sbjct 72 MFEKDIAHEEEGTPAESLDEFRAHMGDSTHPPGPIDAMLGEI-----IVHAEDIRRPLGI 126
Query 132 PRTIPAQRLDRVLRLMP-KNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAM 190
P + RV N + ++ R+ GL LRATD DW+ G+GPEV+GP AL++AM
Sbjct 127 AHEYPMDAVVRVADFYKDSNLLIGSKSRVAGLTLRATDTDWSTGSGPEVSGPMLALVLAM 186
Query 191 AGRPAAVSDLSGPGKPTLAGRLG 213
GR AA+ +LSG G L L
Sbjct 187 TGRRAALDELSGDGLDQLKSALS 209
>gi|330468422|ref|YP_004406165.1| hypothetical protein VAB18032_22325 [Verrucosispora maris AB-18-032]
gi|328811393|gb|AEB45565.1| hypothetical protein VAB18032_22325 [Verrucosispora maris AB-18-032]
Length=257
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/212 (37%), Positives = 99/212 (47%), Gaps = 10/212 (4%)
Query 8 TEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKR 67
++ + DM ER A L LT +Q PSLCAGW+V +V AH+ +Y FG LK
Sbjct 11 SDMRVFDMIVDERHRAADLLDGLTAEQLSQPSLCAGWTVHDVAAHLTTYLR---FGQLKI 67
Query 68 FAK-----GRIVRANEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHH 122
+A R N A L +E+ + RH R G L D ++H
Sbjct 68 YAAIVTTGADFDRFNLRLTRRAARLPVEEIVATLRRHAASRTTIPRSGYDPVLTDVLLHD 127
Query 123 QDIRRPLGQPRTIPAQRLDRVLRLMPKNPR--LRARPRIKGLRLRATDLDWTIGTGPEVT 180
D+R PL R IP +RL R + P R+ GLRL ATD WT G+GP V
Sbjct 128 LDMRVPLNIARDIPEERLRVAFRHLTDRPSPGYTMGDRLHGLRLEATDTGWTHGSGPVVR 187
Query 181 GPGEALLMAMAGRPAAVSDLSGPGKPTLAGRL 212
G EALL+ + GRP A L G G L R+
Sbjct 188 GRAEALLLGIGGRPWAFDHLEGDGLALLRTRV 219
>gi|183980914|ref|YP_001849205.1| hypothetical protein MMAR_0893 [Mycobacterium marinum M]
gi|183174240|gb|ACC39350.1| conserved protein [Mycobacterium marinum M]
Length=209
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/210 (39%), Positives = 99/210 (48%), Gaps = 28/210 (13%)
Query 18 AERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLG----VFGL------LKR 67
AER LA L TL +WETPSLCAGW V++VVAH+ + L G+ R
Sbjct 10 AERGALADDLATLPADRWETPSLCAGWRVRDVVAHLCATASLNPARFFLGMAAAGFSFDR 69
Query 68 FAKGRIVRA----NEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQ 123
F G++ + +DEF GL A P G + G I L H
Sbjct 70 FTNGQLAKHLGPDPAATLDEFRGLQHATSA--------PPGPKVSWLGEIVL-----HGA 116
Query 124 DIRRPLGQPRTIPAQRLDRVLRLMPKNPRLR-ARPRIKGLRLRATDLDWTIGTGPEVTGP 182
DIR+PLG P T L + + + L A+ RI GL L ATD DW G G V GP
Sbjct 117 DIRQPLGIPHTYSPGALRQTIDFYRGSNLLSGAKKRISGLELCATDDDWRHGQGERVEGP 176
Query 183 GEALLMAMAGRPAAVSDLSGPGKPTLAGRL 212
+LL+AM GR A DL+GPG L R
Sbjct 177 LLSLLLAMTGRAAGCVDLTGPGAQLLRSRC 206
>gi|326330608|ref|ZP_08196913.1| hypothetical protein NBCG_02041 [Nocardioidaceae bacterium Broad-1]
gi|325951598|gb|EGD43633.1| hypothetical protein NBCG_02041 [Nocardioidaceae bacterium Broad-1]
Length=206
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (54%), Gaps = 11/200 (5%)
Query 19 ERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIV--RA 76
ER LA L +LT +QW + +LC W +EV+AH+ + L G L+ R
Sbjct 11 ERDALAEDLRSLTPEQWRSATLCGEWDTEEVLAHLGAASRLSFPGWLRSMIGARFDPDVH 70
Query 77 NEVGVDEFAGLSPQE-LADYVGRHLQPRGL--TAGFGGMIALVDGMIHHQDIRRPLGQPR 133
N ++EF G +P+E LA + G + P L T GG+ L+ +H +DIRRPLG
Sbjct 71 NRRRLEEFRGATPEETLARFAG--IGPIRLPRTESVGGLGELI---VHGEDIRRPLGIKH 125
Query 134 TIPAQRLDRVLRLMP-KNPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAG 192
A+ L V R K+ + ++ + GLRLRA D D+ G GPEV+G L+MAMAG
Sbjct 126 DPDAEGLAAVARFFATKDFAVNSKSLVAGLRLRAVDADFAAGDGPEVSGRLLDLVMAMAG 185
Query 193 RPAAVSDLSGPGKPTLAGRL 212
R A +DL G G L GRL
Sbjct 186 RREAATDLDGDGVVELLGRL 205
>gi|260904645|ref|ZP_05912967.1| hypothetical protein BlinB_04889 [Brevibacterium linens BL2]
Length=208
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/197 (37%), Positives = 96/197 (49%), Gaps = 3/197 (1%)
Query 19 ERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGV--FGLLKRFAKGRIVRA 76
ER LA L LT +Q T SLC W+V +V+AH+ D+ + F L A G RA
Sbjct 10 ERRHLADQLADLTPEQQSTQSLCVAWTVHDVLAHLTMPLDVSMPRFALAMLLAGGNFDRA 69
Query 77 NEVGVDEFAGLSPQELADYVGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQPRTIP 136
N A ++ D + G G L D ++H DIR PLG P +
Sbjct 70 NRRLTRRQAARPFNDVVDLLRDKADSHFTPPGEGPEAPLTDVIVHGLDIRWPLGLPSQLH 129
Query 137 AQRLDRVLRLMPKNP-RLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAGRPA 195
+R D L + K P + + + GL+ ATD+DW G+GP V GP +ALL+ + GR
Sbjct 130 EERADVALTAVMKAPASVVKKGVVDGLQFEATDMDWKHGSGPAVFGPAQALLLGITGRAE 189
Query 196 AVSDLSGPGKPTLAGRL 212
AVS LSG G L R+
Sbjct 190 AVSSLSGDGVELLKHRV 206
>gi|54026754|ref|YP_120996.1| hypothetical protein nfa47800 [Nocardia farcinica IFM 10152]
gi|54018262|dbj|BAD59632.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=224
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/207 (37%), Positives = 103/207 (50%), Gaps = 6/207 (2%)
Query 6 DDTEKSMMDMARAERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLL 65
D + + +A AERA LA L TLT QW +LC W+V+EVVAH+ + G F +
Sbjct 4 DISRARLWTLAHAERAALADDLATLTDDQWAHQTLCGRWTVEEVVAHLTAAASTGRFRWI 63
Query 66 KRFAKGRIV--RANEVGVDEFAGLSPQE-LADYVGRHLQPRGLTAGFGGMIALVDGMIHH 122
R + N+ + E G +P E LA + R + P A L + ++H
Sbjct 64 ASVLSARFDFDKHNDRRLAENRGATPAETLARF--RSIIPSTTAASGHTAAWLGEVVVHA 121
Query 123 QDIRRPLGQPRTIPAQRLDRVLRLM-PKNPRLRARPRIKGLRLRATDLDWTIGTGPEVTG 181
QDIR+PLG T + V R N + ++ I+GLRL ATD + G GP VTG
Sbjct 122 QDIRQPLGLTTTPSVEAATDVARFFATTNFTVPSKKSIEGLRLEATDGPFATGRGPLVTG 181
Query 182 PGEALLMAMAGRPAAVSDLSGPGKPTL 208
AL+M MAGR + DL G G TL
Sbjct 182 TTVALVMVMAGRVSYCDDLGGAGVATL 208
>gi|332668912|ref|YP_004451920.1| hypothetical protein Celf_0390 [Cellulomonas fimi ATCC 484]
gi|332337950|gb|AEE44533.1| hypothetical protein Celf_0390 [Cellulomonas fimi ATCC 484]
Length=224
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/204 (41%), Positives = 107/204 (53%), Gaps = 13/204 (6%)
Query 18 AERAELAAFLTTLTLQQWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIVRA- 76
AERA LA L LT QW+ PSLC GWSV+ VVAH+ + G L+ A R A
Sbjct 26 AERAALADDLALLTEAQWDAPSLCRGWSVRHVVAHLTAAASHGRAAWLRSVAGARFDFAV 85
Query 77 -NEVGVDEFAGLSPQE-LADY---VGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQ 131
N+ + E G SPQE LA + V P G A + G + ++H QD+RRPLG
Sbjct 86 HNDRRLAEHLGASPQETLARFRAVVRSTTAPPGPAAAWLGEV-----VVHAQDVRRPLGL 140
Query 132 PRTIPAQRLDRVLRL-MPKNPRLRARPRIKGLRLRATDLDWTIGTGPE-VTGPGEALLMA 189
P +P V L + ++ + R ++GLR+ ATD + G G E V GP AL MA
Sbjct 141 PSAVPVAASTAVAELFVGRDLTVDGRAAVRGLRVEATDGPFRAGDGTEPVQGPTLALTMA 200
Query 190 MAGRPAAVSDLSGPGKPTLAGRLG 213
+AGR DL+GPG TL R G
Sbjct 201 IAGRADFCDDLTGPGVATLRARCG 224
>gi|226361786|ref|YP_002779564.1| hypothetical protein ROP_23720 [Rhodococcus opacus B4]
gi|226240271|dbj|BAH50619.1| hypothetical protein [Rhodococcus opacus B4]
Length=214
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/186 (38%), Positives = 94/186 (51%), Gaps = 12/186 (6%)
Query 34 QWETPSLCAGWSVKEVVAHMISYEDLGVFGLLKRFAKGRIVR--ANEVGVDEFAGLSPQE 91
QW SLC W V+EVVAH+ + +G R N+ + E+ G +P E
Sbjct 32 QWAQQSLCGRWVVEEVVAHLTAAASIGAVRWFGSVLGARFDFDLHNDRRLAEYRGATPTE 91
Query 92 LADYVGRHLQPR----GLTAGFGGMIALVDGMIHHQDIRRPLGQPRTIPAQRLDRVLRLM 147
++ R + G TA + G + ++H QDIRRPLG RT + + V
Sbjct 92 TLEWFRRIVTSTTSAPGPTAAWLGEV-----VVHAQDIRRPLGLARTPAVETVTEVAGFY 146
Query 148 PK-NPRLRARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAGRPAAVSDLSGPGKP 206
+ + + R I+GLRL ATD +T GTGP V+G AL MAMAGR A DL+GPG P
Sbjct 147 ARRDFTVAGRSAIEGLRLEATDGPFTTGTGPMVSGTTLALTMAMAGRSAYCDDLTGPGVP 206
Query 207 TLAGRL 212
TL R
Sbjct 207 TLRNRC 212
Lambda K H
0.321 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 251148961304
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40