BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2040c Length=300 Score E Sequences producing significant alignments: (Bits) Value gi|15609177|ref|NP_216556.1| sugar-transport integral membrane p... 593 1e-167 gi|340627051|ref|YP_004745503.1| putative sugar-transport integr... 588 4e-166 gi|339294967|gb|AEJ47078.1| sugar-transport integral membrane pr... 565 3e-159 gi|296165107|ref|ZP_06847658.1| ABC superfamily ATP binding cass... 507 1e-141 gi|183983014|ref|YP_001851305.1| ABC-type sugar transport integr... 506 2e-141 gi|118617776|ref|YP_906108.1| ABC-type sugar transport integral ... 501 6e-140 gi|240170479|ref|ZP_04749138.1| ABC-type sugar transport integra... 496 2e-138 gi|254822135|ref|ZP_05227136.1| sugar ABC transporter permease [... 475 3e-132 gi|15827751|ref|NP_302014.1| ABC transporter inner membrane prot... 467 1e-129 gi|41407866|ref|NP_960702.1| hypothetical protein MAP1768c [Myco... 457 1e-126 gi|118467218|ref|YP_881669.1| sugar ABC transporter permease [My... 457 1e-126 gi|336457342|gb|EGO36355.1| permease component of ABC-type sugar... 456 1e-126 gi|342859734|ref|ZP_08716387.1| sugar ABC transporter permease [... 432 4e-119 gi|333990726|ref|YP_004523340.1| sugar ABC transporter transmemb... 401 7e-110 gi|251794681|ref|YP_003009412.1| binding-protein-dependent trans... 225 7e-57 gi|340751770|ref|ZP_08688580.1| binding-protein-dependent transp... 218 9e-55 gi|293572837|ref|ZP_06683790.1| ABC transporter, permease protei... 216 3e-54 gi|257898151|ref|ZP_05677804.1| ABC transporter [Enterococcus fa... 216 3e-54 gi|269796051|ref|YP_003315506.1| sugar ABC transporter permease ... 216 3e-54 gi|257884203|ref|ZP_05663856.1| ABC transporter [Enterococcus fa... 216 3e-54 gi|257886996|ref|ZP_05666649.1| ABC transporter [Enterococcus fa... 216 3e-54 gi|269839477|ref|YP_003324169.1| binding-protein-dependent trans... 216 3e-54 gi|293567478|ref|ZP_06678825.1| ABC transporter, permease protei... 216 5e-54 gi|332672116|ref|YP_004455124.1| binding-protein-dependent trans... 212 5e-53 gi|15616251|ref|NP_244556.1| sugar transport system (permease) [... 211 9e-53 gi|297199274|ref|ZP_06916671.1| sugar ABC transporter permease [... 210 2e-52 gi|294614267|ref|ZP_06694186.1| ABC transporter, permease protei... 210 3e-52 gi|325265053|ref|ZP_08131780.1| sugar ABC transporter, permease ... 209 4e-52 gi|269839075|ref|YP_003323767.1| binding-protein-dependent trans... 208 7e-52 gi|329927606|ref|ZP_08281769.1| ABC transporter, permease protei... 208 8e-52 gi|269925946|ref|YP_003322569.1| binding-protein-dependent trans... 208 1e-51 gi|21221925|ref|NP_627704.1| binding protein dependent transport... 207 1e-51 gi|334138510|ref|ZP_08511928.1| ABC transporter, permease protei... 207 1e-51 gi|148655502|ref|YP_001275707.1| binding-protein-dependent trans... 207 2e-51 gi|334137923|ref|ZP_08511347.1| ABC transporter, permease protei... 206 3e-51 gi|160935669|ref|ZP_02083044.1| hypothetical protein CLOBOL_0055... 206 4e-51 gi|29376740|ref|NP_815894.1| ABC transporter permease [Enterococ... 206 4e-51 gi|315648246|ref|ZP_07901347.1| binding-protein-dependent transp... 206 5e-51 gi|325567135|ref|ZP_08143802.1| ABC superfamily ATP binding cass... 205 6e-51 gi|315576589|gb|EFU88780.1| ABC transporter, permease protein [E... 205 6e-51 gi|266619800|ref|ZP_06112735.1| transmembrane permease MsmF [Clo... 205 7e-51 gi|261408086|ref|YP_003244327.1| binding-protein-dependent trans... 205 8e-51 gi|251796585|ref|YP_003011316.1| binding-protein-dependent trans... 204 1e-50 gi|329923000|ref|ZP_08278516.1| ABC transporter, permease protei... 204 1e-50 gi|315644692|ref|ZP_07897823.1| binding-protein-dependent transp... 204 1e-50 gi|226315389|ref|YP_002775285.1| ABC transporter permease [Brevi... 204 1e-50 gi|327535626|gb|AEA94460.1| ABC superfamily ATP binding cassette... 204 1e-50 gi|325662220|ref|ZP_08150835.1| hypothetical protein HMPREF0490_... 204 2e-50 gi|257416547|ref|ZP_05593541.1| conserved hypothetical protein [... 204 2e-50 gi|331086014|ref|ZP_08335097.1| hypothetical protein HMPREF0987_... 204 2e-50 >gi|15609177|ref|NP_216556.1| sugar-transport integral membrane protein ABC transporter [Mycobacterium tuberculosis H37Rv] gi|15841528|ref|NP_336565.1| sugar ABC transporter, permease protein [Mycobacterium tuberculosis CDC1551] gi|31793223|ref|NP_855716.1| sugar-transport integral membrane protein ABC transporter [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=300 Score = 593 bits (1529), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 300/300 (100%), Positives = 300/300 (100%), Gaps = 0/300 (0%) Query 1 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF 60 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF Sbjct 1 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF 60 Query 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM Sbjct 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 Query 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM Sbjct 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 Query 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG Sbjct 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 Query 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 300 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG Sbjct 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 300 >gi|340627051|ref|YP_004745503.1| putative sugar-transport integral membrane protein ABC transporter [Mycobacterium canettii CIPT 140010059] gi|340005241|emb|CCC44395.1| putative sugar-transport integral membrane protein ABC transporter [Mycobacterium canettii CIPT 140010059] Length=300 Score = 588 bits (1515), Expect = 4e-166, Method: Compositional matrix adjust. Identities = 297/300 (99%), Positives = 299/300 (99%), Gaps = 0/300 (0%) Query 1 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF 60 MT+RRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFV LDNFRNLF Sbjct 1 MTQRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVGLDNFRNLF 60 Query 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 TSDPLFLIAVVNTAVYTVGTVVPTV+VSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM Sbjct 61 TSDPLFLIAVVNTAVYTVGTVVPTVVVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 Query 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM Sbjct 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 Query 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG Sbjct 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 Query 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 300 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG Sbjct 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 300 >gi|339294967|gb|AEJ47078.1| sugar-transport integral membrane protein ABC transporter [Mycobacterium tuberculosis CCDC5079] gi|339298591|gb|AEJ50701.1| sugar-transport integral membrane protein ABC transporter [Mycobacterium tuberculosis CCDC5180] Length=287 Score = 565 bits (1456), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 14 MFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNT 73 MFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNT Sbjct 1 MFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNT 60 Query 74 AVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNG 133 AVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNG Sbjct 61 AVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNG 120 Query 134 LLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAARI 193 LLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAARI Sbjct 121 LLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAARI 180 Query 194 DGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGIML 253 DGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGIML Sbjct 181 DGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGIML 240 Query 254 FQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 300 FQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG Sbjct 241 FQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 287 >gi|296165107|ref|ZP_06847658.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899519|gb|EFG78974.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=313 Score = 507 bits (1305), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 248/293 (85%), Positives = 273/293 (94%), Gaps = 0/293 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 RRAWAGR+FVAPNLAAV VFMLFPLGFSLYMSFQ+WD+F FV L NFR LFTSDPLF Sbjct 20 RRAWAGRLFVAPNLAAVAVFMLFPLGFSLYMSFQRWDVFRPPKFVGLQNFRELFTSDPLF 79 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIA+ NT ++T+GTVVPT++VSLVVA LNRK++GI +FRT+VFLPLAISSVVMAVVWQF Sbjct 80 LIAIGNTVIFTLGTVVPTIVVSLVVAGVLNRKVRGIGIFRTIVFLPLAISSVVMAVVWQF 139 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 VFNTD+GLLN+MLGW+GIGP+PWL+EPRWAM SLC+VSVWRSVPFATV+LLAAMQGVPET Sbjct 140 VFNTDSGLLNMMLGWIGIGPVPWLVEPRWAMASLCIVSVWRSVPFATVILLAAMQGVPET 199 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAARIDGAGE+RQFVSITVPLIRG++SFV VISIIHAFQAFDLVYVL GANGGPETAT Sbjct 200 VYEAARIDGAGEVRQFVSITVPLIRGSISFVGVISIIHAFQAFDLVYVLNGANGGPETAT 259 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 YVLGIMLFQHAFSFLEFGYASALAWVMFAILL LTV+QLRI +RSWE SRGL Sbjct 260 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLGLTVMQLRIARQRSWETSRGL 312 >gi|183983014|ref|YP_001851305.1| ABC-type sugar transport integral membrane protein [Mycobacterium marinum M] gi|183176340|gb|ACC41450.1| ABC-type sugar transport integral membrane protein [Mycobacterium marinum M] Length=317 Score = 506 bits (1303), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 252/289 (88%), Positives = 270/289 (94%), Gaps = 0/289 (0%) Query 11 AGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAV 70 AGRMFVAPN+AAV VF+LFPLGFSLYMSFQ WDLF TFV L NF LFTSDPLFLIA+ Sbjct 28 AGRMFVAPNMAAVAVFLLFPLGFSLYMSFQNWDLFRAPTFVGLQNFAKLFTSDPLFLIAL 87 Query 71 VNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNT 130 N+ VYT GTVVPTV++SLVVAA LNRK+ GI +FRT+VFLPLAISSVVMAVVWQFVF+T Sbjct 88 RNSVVYTAGTVVPTVLISLVVAAVLNRKVPGIGVFRTIVFLPLAISSVVMAVVWQFVFDT 147 Query 131 DNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEA 190 +NGLLNI+LGW+G+GP+PWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEA Sbjct 148 NNGLLNIILGWIGVGPVPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEA 207 Query 191 ARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLG 250 A+IDGAGEIRQFVSITVPLIRGA+SFVVVISIIHAFQAFDLVYVLTG NGGPET TYVLG Sbjct 208 AKIDGAGEIRQFVSITVPLIRGAMSFVVVISIIHAFQAFDLVYVLTGPNGGPETGTYVLG 267 Query 251 IMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 IMLFQHAFSFLEFGYASALAWV+FAILLVLTVLQLRIT RRSWEAS GL Sbjct 268 IMLFQHAFSFLEFGYASALAWVIFAILLVLTVLQLRITRRRSWEASSGL 316 >gi|118617776|ref|YP_906108.1| ABC-type sugar transport integral membrane protein [Mycobacterium ulcerans Agy99] gi|118569886|gb|ABL04637.1| ABC-type sugar transport integral membrane protein [Mycobacterium ulcerans Agy99] Length=317 Score = 501 bits (1289), Expect = 6e-140, Method: Compositional matrix adjust. Identities = 251/289 (87%), Positives = 268/289 (93%), Gaps = 0/289 (0%) Query 11 AGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAV 70 AGRMFVAPNLAAV VF+LFPLGFSLYMSFQ WDLF TFV L NF LFTSDPLFLIA+ Sbjct 28 AGRMFVAPNLAAVAVFLLFPLGFSLYMSFQNWDLFRAPTFVGLQNFAKLFTSDPLFLIAL 87 Query 71 VNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNT 130 N+ VYT GTVVPTV++SLVVAA LNRK+ GI +FRT+VFLPLAISSVVMAVVWQFVF+T Sbjct 88 RNSVVYTAGTVVPTVLISLVVAAVLNRKVPGIGVFRTIVFLPLAISSVVMAVVWQFVFDT 147 Query 131 DNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEA 190 +NGLLNI+LGW+G+GP+PWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEA Sbjct 148 NNGLLNIILGWIGVGPVPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEA 207 Query 191 ARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLG 250 A+IDGAGEIRQFVSITVPLI G +SFVVVISIIHAFQAFDLVYVLTG NGGPET TYVLG Sbjct 208 AKIDGAGEIRQFVSITVPLIGGVMSFVVVISIIHAFQAFDLVYVLTGPNGGPETGTYVLG 267 Query 251 IMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 IMLFQHAFSFLEFGYASALAWV+FAILLVLTVLQLRIT RRSWEAS GL Sbjct 268 IMLFQHAFSFLEFGYASALAWVIFAILLVLTVLQLRITRRRSWEASSGL 316 >gi|240170479|ref|ZP_04749138.1| ABC-type sugar transport integral membrane protein [Mycobacterium kansasii ATCC 12478] Length=316 Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 256/294 (88%), Positives = 276/294 (94%), Gaps = 0/294 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 RR WAGR+FVAPNLAAVVVFMLFPLGFSLYMSFQ+WDLFT FV L NFR+LFT DPLF Sbjct 23 RRPWAGRLFVAPNLAAVVVFMLFPLGFSLYMSFQRWDLFTPPKFVGLGNFRDLFTVDPLF 82 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIAV NTA++TVGTV PTV++SLV+A LNRK+KGI +FRT+ FLPLAISSVVMAV+WQF Sbjct 83 LIAVRNTAIFTVGTVAPTVLISLVIAGVLNRKVKGIGIFRTITFLPLAISSVVMAVIWQF 142 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 VF+T+NGLLNIMLGW+GIGPIPWLIEPRWAM SLCLVSVWRSVPFATVVLLAAMQGVPET Sbjct 143 VFDTNNGLLNIMLGWVGIGPIPWLIEPRWAMASLCLVSVWRSVPFATVVLLAAMQGVPET 202 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAA+IDGAGEIRQFVSITVPLIRGA+SFVVVISIIHAFQAFDLVYVLTGANGGPET T Sbjct 203 VYEAAKIDGAGEIRQFVSITVPLIRGAMSFVVVISIIHAFQAFDLVYVLTGANGGPETGT 262 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGLG 300 YVLGIMLFQ+AF FLEFGYASALAWVMFA+LLVLTVLQLR+T RRSWE SRGLG Sbjct 263 YVLGIMLFQNAFGFLEFGYASALAWVMFAVLLVLTVLQLRLTRRRSWEVSRGLG 316 >gi|254822135|ref|ZP_05227136.1| sugar ABC transporter permease [Mycobacterium intracellulare ATCC 13950] Length=323 Score = 475 bits (1223), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 240/293 (82%), Positives = 271/293 (93%), Gaps = 0/293 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 R AWAGR+FVAPNL AV VFMLFPLGFSLYMSFQ+WD+FT FV L NF LFT+DPLF Sbjct 30 RHAWAGRLFVAPNLVAVAVFMLFPLGFSLYMSFQRWDVFTPPKFVGLKNFGELFTADPLF 89 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIA+ NT ++T+GTVVPTV++SLVVA LN+K +GI +FRT+VFLPLAISSVVMAVVWQF Sbjct 90 LIAIRNTVIFTLGTVVPTVVISLVVAGVLNQKARGIGIFRTIVFLPLAISSVVMAVVWQF 149 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 VFNTDNGLLNIMLGW+G+GP+PWL+EP WAMVSLC+VSVWRSVPFA VVLLAAMQGVP T Sbjct 150 VFNTDNGLLNIMLGWVGLGPVPWLVEPHWAMVSLCIVSVWRSVPFAAVVLLAAMQGVPGT 209 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAA+IDGA EIRQFVSITVPLIRG++SFVV+IS+IHAFQAFD+VYVLTGANGGPE+AT Sbjct 210 VYEAAKIDGASEIRQFVSITVPLIRGSISFVVIISVIHAFQAFDMVYVLTGANGGPESAT 269 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 YVLGIMLFQHAFSFLEFGYASALAWVMFA+LLVLTV+QL+++HRRS E SRGL Sbjct 270 YVLGIMLFQHAFSFLEFGYASALAWVMFAVLLVLTVVQLKVSHRRSLETSRGL 322 >gi|15827751|ref|NP_302014.1| ABC transporter inner membrane protein [Mycobacterium leprae TN] gi|221230228|ref|YP_002503644.1| putative ABC-transport protein, inner membrane component [Mycobacterium leprae Br4923] gi|2337834|emb|CAB11326.1| possible sugar transport protein [Mycobacterium leprae] gi|13093303|emb|CAC30377.1| probable ABC-transport protein, inner membrane component [Mycobacterium leprae] gi|219933335|emb|CAR71521.1| probable ABC-transport protein, inner membrane component [Mycobacterium leprae Br4923] Length=319 Score = 467 bits (1201), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 239/293 (82%), Positives = 262/293 (90%), Gaps = 0/293 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 RRAWAGRMF+APNLA+V VFMLFPLGFSLYMSFQKWD+FT FV L NF+NLFTSDPLF Sbjct 26 RRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSFQKWDMFTPPVFVGLANFQNLFTSDPLF 85 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIA+ N+ V+TVGTV+PTV++SLVVA LN+K+KGI +FRT+VFLPLAISSVVMAVVWQF Sbjct 86 LIALCNSVVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMAVVWQF 145 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 +FNT NGLLNIMLGW+GIGPIPWL+ P WAM SLC+VSVWRSVPFATVVLLAAMQ VP+T Sbjct 146 IFNTHNGLLNIMLGWIGIGPIPWLVNPGWAMASLCIVSVWRSVPFATVVLLAAMQEVPKT 205 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAA+IDGAGEIRQF+SITVP IRGA+SFVVVIS IHAFQ FDLVYVL G NGGPE AT Sbjct 206 VYEAAKIDGAGEIRQFISITVPFIRGAISFVVVISFIHAFQTFDLVYVLNGPNGGPELAT 265 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 YVLGIMLFQHAFSFLEFGYASALA V FAILLVL VLQL + R SWE S GL Sbjct 266 YVLGIMLFQHAFSFLEFGYASALALVTFAILLVLIVLQLLLNRRHSWEVSGGL 318 >gi|41407866|ref|NP_960702.1| hypothetical protein MAP1768c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396220|gb|AAS04085.1| hypothetical protein MAP_1768c [Mycobacterium avium subsp. paratuberculosis K-10] Length=314 Score = 457 bits (1175), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 239/293 (82%), Positives = 272/293 (93%), Gaps = 0/293 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 R AWAGR+FVAPN+ AV VFMLFPLGFSLYMSFQ+WD+FT FV L NF +LF+SDPLF Sbjct 21 RHAWAGRLFVAPNMVAVAVFMLFPLGFSLYMSFQRWDVFTPPKFVGLKNFTDLFSSDPLF 80 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIA+ NT ++T+G+VVPTV +SL VA LN+K++GI +FRT+VFLPLAISSVVMAVVWQF Sbjct 81 LIAIRNTVIFTLGSVVPTVAISLAVAGVLNQKVRGIGIFRTIVFLPLAISSVVMAVVWQF 140 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 VFNTDNGLLNIMLGW+G+GP+PWL+EPRWAM SLC+VSVWRSVPFATVVLLAAMQGVPET Sbjct 141 VFNTDNGLLNIMLGWVGLGPVPWLVEPRWAMASLCIVSVWRSVPFATVVLLAAMQGVPET 200 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAARIDGAGEIRQF +ITVPLIRG++SFVV+ISIIHAFQAFD+VYVLTG +GGPE+AT Sbjct 201 VYEAARIDGAGEIRQFFAITVPLIRGSISFVVIISIIHAFQAFDMVYVLTGPSGGPESAT 260 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 YVLGIMLFQHAFSFLEFGYASALAWVMFA+LLVLTV+QLR++HRRS E SRGL Sbjct 261 YVLGIMLFQHAFSFLEFGYASALAWVMFAVLLVLTVVQLRVSHRRSLETSRGL 313 >gi|118467218|ref|YP_881669.1| sugar ABC transporter permease [Mycobacterium avium 104] gi|254775137|ref|ZP_05216653.1| sugar ABC transporter permease [Mycobacterium avium subsp. avium ATCC 25291] gi|118168505|gb|ABK69402.1| sugar ABC transporter permease [Mycobacterium avium 104] Length=314 Score = 457 bits (1175), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 239/293 (82%), Positives = 272/293 (93%), Gaps = 0/293 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 R AWAGR+FVAPN+ AV VFMLFPLGFSLYMSFQ+WD+FT FV L NF +LF+SDPLF Sbjct 21 RHAWAGRLFVAPNMVAVAVFMLFPLGFSLYMSFQRWDVFTPPKFVGLKNFTDLFSSDPLF 80 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIA+ NT ++T+G+VVPTV +SL VA LN+K++GI +FRT+VFLPLAISSVVMAVVWQF Sbjct 81 LIAIRNTVIFTLGSVVPTVAISLAVAGVLNQKVRGIGIFRTIVFLPLAISSVVMAVVWQF 140 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 VFNTDNGLLNIMLGW+G+GP+PWL+EPRWAM SLC+VSVWRSVPFATVVLLAAMQGVPET Sbjct 141 VFNTDNGLLNIMLGWVGLGPVPWLVEPRWAMASLCIVSVWRSVPFATVVLLAAMQGVPET 200 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAARIDGAGEIRQF +ITVPLIRG++SFVV+ISIIHAFQAFD+VYVLTG +GGPE+AT Sbjct 201 VYEAARIDGAGEIRQFFAITVPLIRGSISFVVIISIIHAFQAFDMVYVLTGPSGGPESAT 260 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 YVLGIMLFQHAFSFLEFGYASALAWVMFA+LLVLTV+QLR++HRRS E SRGL Sbjct 261 YVLGIMLFQHAFSFLEFGYASALAWVMFAVLLVLTVVQLRVSHRRSLETSRGL 313 >gi|336457342|gb|EGO36355.1| permease component of ABC-type sugar transporter [Mycobacterium avium subsp. paratuberculosis S397] Length=314 Score = 456 bits (1174), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 239/293 (82%), Positives = 271/293 (93%), Gaps = 0/293 (0%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 R AWAGR+FVAPN+ AV VFMLFPLGFSLYMSFQ+WD+FT FV L NF +LF+SDPLF Sbjct 21 RHAWAGRLFVAPNMVAVAVFMLFPLGFSLYMSFQRWDVFTPPKFVGLKNFTDLFSSDPLF 80 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQF 126 LIA+ NT ++T+G+VVPTV +SL VA LN+K++GI +FRT+VFLPLAISSVVMAVVWQF Sbjct 81 LIAIRNTVIFTLGSVVPTVAISLAVAGVLNQKVRGIGIFRTIVFLPLAISSVVMAVVWQF 140 Query 127 VFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPET 186 VFNTDNGLLNIMLGW+G+GP+PWL+EPRWAM SLC+VSVWRSVPFATVVLLAAMQGVPET Sbjct 141 VFNTDNGLLNIMLGWVGLGPVPWLVEPRWAMASLCIVSVWRSVPFATVVLLAAMQGVPET 200 Query 187 VYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETAT 246 VYEAARIDGAGEIRQF +ITVPLIRG +SFVV+ISIIHAFQAFD+VYVLTG +GGPE+AT Sbjct 201 VYEAARIDGAGEIRQFFAITVPLIRGPISFVVIISIIHAFQAFDMVYVLTGPSGGPESAT 260 Query 247 YVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 YVLGIMLFQHAFSFLEFGYASALAWVMFA+LLVLTV+QLR++HRRS E SRGL Sbjct 261 YVLGIMLFQHAFSFLEFGYASALAWVMFAVLLVLTVVQLRVSHRRSLETSRGL 313 >gi|342859734|ref|ZP_08716387.1| sugar ABC transporter permease [Mycobacterium colombiense CECT 3035] gi|342132866|gb|EGT86086.1| sugar ABC transporter permease [Mycobacterium colombiense CECT 3035] Length=281 Score = 432 bits (1110), Expect = 4e-119, Method: Compositional matrix adjust. Identities = 225/280 (81%), Positives = 260/280 (93%), Gaps = 0/280 (0%) Query 20 LAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNTAVYTVG 79 +AAV VFMLFPLGFSLYMSFQ+WD+FT FV L NF +LFTSDPLFLIA+ NT ++T+G Sbjct 1 MAAVAVFMLFPLGFSLYMSFQQWDVFTPPKFVGLKNFGDLFTSDPLFLIAIRNTVIFTLG 60 Query 80 TVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNGLLNIML 139 TVVPT+++SLVVA LN+K++GI +FRT+VFLPLAISSVVMAVVWQFVFNTDNGLLNIML Sbjct 61 TVVPTILISLVVAGVLNQKVRGIGIFRTIVFLPLAISSVVMAVVWQFVFNTDNGLLNIML 120 Query 140 GWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAARIDGAGEI 199 GW+GIGP+PWL++P WAM SLC+VSVWRSVPFATVVLLAAMQGVP TVYEAA+IDGA EI Sbjct 121 GWVGIGPVPWLVDPHWAMASLCIVSVWRSVPFATVVLLAAMQGVPGTVYEAAKIDGASEI 180 Query 200 RQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGIMLFQHAFS 259 RQF+SITVPLIRG++SFV++IS+IHAFQAFD+VYVL G +GGPE+ATYVLGIMLFQHAFS Sbjct 181 RQFISITVPLIRGSISFVIIISVIHAFQAFDMVYVLNGPSGGPESATYVLGIMLFQHAFS 240 Query 260 FLEFGYASALAWVMFAILLVLTVLQLRITHRRSWEASRGL 299 FLEFGYASALAWVMFA+LLVLTV+QLR++HRRS E SRGL Sbjct 241 FLEFGYASALAWVMFAVLLVLTVVQLRVSHRRSLETSRGL 280 >gi|333990726|ref|YP_004523340.1| sugar ABC transporter transmembrane protein [Mycobacterium sp. JDM601] gi|333486694|gb|AEF36086.1| ABC-type sugar transport integral membrane protein [Mycobacterium sp. JDM601] Length=294 Score = 401 bits (1030), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 216/291 (75%), Positives = 254/291 (88%), Gaps = 3/291 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 TRRR R AGR F+APNLAAV +FM FPL FSLYMSFQ+WDLFT F+ N+ +L T Sbjct 4 TRRRAR---AGRWFIAPNLAAVALFMAFPLAFSLYMSFQQWDLFTPPRFIGATNYSDLLT 60 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 DPLF IAV NT V+TVGTVVPTV++SL VA LNR ++GI LFR + FLPLA+SSVV+A Sbjct 61 GDPLFGIAVRNTTVFTVGTVVPTVVISLAVAGLLNRAVRGIGLFRAIAFLPLAVSSVVIA 120 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 VVWQFVFNTD+GLLNIMLGW G+ P+PWL EP WAM SLCLVSVW+SVPFATV+LLAAMQ Sbjct 121 VVWQFVFNTDSGLLNIMLGWFGVSPVPWLTEPHWAMASLCLVSVWKSVPFATVILLAAMQ 180 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 GVPE+++EAARIDGAG++R+FVSITVP+IRGAL FVVVIS+I+AFQAFDLVYVLTG++GG Sbjct 181 GVPESLHEAARIDGAGQVRRFVSITVPMIRGALWFVVVISVINAFQAFDLVYVLTGSSGG 240 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 PET TYVL IMLFQHAF+FL+FGYASALAWVMFA+LLVLT++QLR++ R + Sbjct 241 PETGTYVLAIMLFQHAFAFLDFGYASALAWVMFAVLLVLTIIQLRLSRRNA 291 >gi|251794681|ref|YP_003009412.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247542307|gb|ACS99325.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length=294 Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 120/288 (42%), Positives = 189/288 (66%), Gaps = 6/288 (2%) Query 4 RRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSD 63 RR R G F+ PN+ ++F+ FP+ S +SF +W+ F F N+ L+ SD Sbjct 7 RRNRLT--GYTFLLPNILGFLIFICFPVCASFLISFTEWNGFGEIKFTGFSNYARLW-SD 63 Query 64 PLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVV 123 F I+++N+ V T +V T++++++ A LNR IKG+ LFRT +FLP +++ +AVV Sbjct 64 DTFRISLINSLVMTAVSVPVTLMLAILAAVALNRGIKGVKLFRTAIFLPHITATIAVAVV 123 Query 124 WQFVFNTDNGLLNIMLGWLGIG-PIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQG 182 WQ ++N G +N L LGI P WL +WA++S+ +VS+W S+ + V+ LA +QG Sbjct 124 WQLLYNPTMGPINGFLRSLGIAHPPAWLASTQWALISVIIVSIWHSIGYYMVLYLAGLQG 183 Query 183 VPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGP 242 +P+ +YEAA IDGAG++ QF +IT+P++ + F V++ II++F+ FDLVYVLT GGP Sbjct 184 IPKDLYEAAEIDGAGKVSQFRNITLPMLSPVIFFTVIMGIINSFKVFDLVYVLT--KGGP 241 Query 243 ETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 +T++L ++ AF E+GYASA+A+V+FAI+LV+T++Q R R Sbjct 242 GRSTHMLVYDIYDTAFKRYEYGYASAMAYVLFAIILVITLIQFRGQKR 289 >gi|340751770|ref|ZP_08688580.1| binding-protein-dependent transport system inner membrane component [Fusobacterium mortiferum ATCC 9817] gi|229420730|gb|EEO35777.1| binding-protein-dependent transport system inner membrane component [Fusobacterium mortiferum ATCC 9817] Length=292 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 114/288 (40%), Positives = 190/288 (66%), Gaps = 8/288 (2%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 R G +F+AP + +VF +P SL++SF ++L + FV +DN+ LF +DPLF Sbjct 3 NRKITGYLFIAPWIIGFLVFTAYPFISSLWLSFTNYNLLSAPKFVGIDNYIKLF-NDPLF 61 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAIS-SVVMAVVWQ 125 + ++NT Y TV + +L +A LN K+KGI+ FRT ++P + SV +AV+W+ Sbjct 62 IKTLMNTLKYVFITVPVKLAFALFIANILNYKLKGINFFRTAYYIPSILGGSVAIAVLWR 121 Query 126 FVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPE 185 F+F +D GL+NI++G+LGI PI WL +P++A+ ++ L+ W+ A V+ LAA++ +PE Sbjct 122 FLF-SDQGLINIIIGYLGIEPISWLGDPKYALFTVSLLRAWQFGS-AMVIFLAALKNIPE 179 Query 186 TVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETA 245 +YE+ARI+GA + QF+ IT+P+I + F ++ +I AFQ F+ Y++TG GGP + Sbjct 180 DLYESARIEGASKTMQFLHITIPMISPVIFFNFIMQLIQAFQEFNGPYIITG--GGPLNS 237 Query 246 TYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSW 293 T +L ++++ +AF++ + GYASA++WV+F I++V TV R ++ W Sbjct 238 TKLLPLLIYDNAFNYYQMGYASAISWVLFVIIMVFTVFSFR--SQKYW 283 >gi|293572837|ref|ZP_06683790.1| ABC transporter, permease protein [Enterococcus faecium E980] gi|291607084|gb|EFF36453.1| ABC transporter, permease protein [Enterococcus faecium E980] Length=298 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 115/288 (40%), Positives = 175/288 (61%), Gaps = 3/288 (1%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 R +R W F+APN VF L P+ FSL ++F KWD F+ F LDNFR + +D Sbjct 14 RRKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKM-ANDE 72 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 F I++ NT +YT V T++ SL +A LN+KI+G+ LFRT+ F P S V +AVVW Sbjct 73 TFWISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVW 132 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +F+ G +NI L P W WA+ ++ +VS+WR + + ++ LA +Q + Sbjct 133 NMLFHPTMGPINIFLKRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQ 192 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPET 244 + +YEA+ +DGA +QF+++T+P +R FV ++ +I+ F+ FDLV V+T +GGP Sbjct 193 KELYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMT--DGGPGR 250 Query 245 ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 AT VL ++ AF +FGYASA++ V+F I+L +TV+Q RR+ Sbjct 251 ATNVLVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRRT 298 >gi|257898151|ref|ZP_05677804.1| ABC transporter [Enterococcus faecium Com15] gi|257836063|gb|EEV61137.1| ABC transporter [Enterococcus faecium Com15] Length=321 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 116/288 (41%), Positives = 175/288 (61%), Gaps = 3/288 (1%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 R +R W F+APN VF L P+ FSL ++F KWD F+ F LDNFR + +D Sbjct 37 RRKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKM-ANDE 95 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 F I++ NT +YT V T++ SL +A LN+KI+G+ LFRT+ F P S V +AVVW Sbjct 96 TFWISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVW 155 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +F+ G +NI L P W WA+ ++ +VS+WR + + ++ LA +Q V Sbjct 156 NMLFHPTMGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSVQ 215 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPET 244 + +YEA+ +DGA +QF+++T+P +R FV ++ +I+ F+ FDLV V+T +GGP Sbjct 216 KELYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMT--DGGPGR 273 Query 245 ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 AT VL ++ AF +FGYASA++ V+F I+L +TV+Q RR+ Sbjct 274 ATNVLVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRRT 321 >gi|269796051|ref|YP_003315506.1| sugar ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269098236|gb|ACZ22672.1| permease component of ABC-type sugar transporter [Sanguibacter keddieii DSM 10542] Length=321 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 120/290 (42%), Positives = 178/290 (62%), Gaps = 4/290 (1%) Query 1 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF 60 M+ R R A +F++P + + FML P+ S+Y S WD FT TFV +DN+ LF Sbjct 27 MSTSRRREARYFYLFISPWIVGFLAFMLGPMIASVYYSLTDWDTFTPPTFVGIDNYVRLF 86 Query 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 T DP+F A+ NT Y +V +++ L +A LN++++ LFRT+++LP + V Sbjct 87 TDDPIFWKALGNTFYYAAISVPLGLVLGLWLAHLLNKQVRARKLFRTLIYLPTLVPLVAT 146 Query 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 A+++Q V D G LN +LGW GI WL++P W +L ++S W ATV+LLA M Sbjct 147 AMIFQMVLAPD-GPLNGLLGWFGIDGPAWLLDPDWVKPALIVLSAW-GAGGATVLLLATM 204 Query 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 +G+P YEAA IDGAG RQF SIT P + + F +++ +I AFQ F VY+LT +G Sbjct 205 KGIPNEFYEAAEIDGAGSARQFWSITFPQVTPIIFFNLIMGLIGAFQIFSQVYILT--SG 262 Query 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 GP A+ ++ +LF AFS+ GYASA++WV+F I+L+ T++ R + R Sbjct 263 GPNNASQMVVPLLFNEAFSYYRMGYASAISWVLFVIILLFTLVAFRTSRR 312 >gi|257884203|ref|ZP_05663856.1| ABC transporter [Enterococcus faecium 1,231,501] gi|257820041|gb|EEV47189.1| ABC transporter [Enterococcus faecium 1,231,501] Length=321 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 115/288 (40%), Positives = 175/288 (61%), Gaps = 3/288 (1%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 R +R W F+APN VF L P+ FSL ++F KWD F+ F LDNFR + +D Sbjct 37 RRKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKM-ANDE 95 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 F I++ NT +YT V T++ SL +A LN+KI+G+ LFRT+ F P S V +AVVW Sbjct 96 TFWISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVW 155 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +F+ G +NI L P W WA+ ++ +VS+WR + + ++ LA +Q + Sbjct 156 NMLFHPTMGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQ 215 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPET 244 + +YEA+ +DGA +QF+++T+P +R FV ++ +I+ F+ FDLV V+T +GGP Sbjct 216 KELYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMT--DGGPGR 273 Query 245 ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 AT VL ++ AF +FGYASA++ V+F I+L +TV+Q RR+ Sbjct 274 ATNVLVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRRT 321 >gi|257886996|ref|ZP_05666649.1| ABC transporter [Enterococcus faecium 1,141,733] gi|257823050|gb|EEV49982.1| ABC transporter [Enterococcus faecium 1,141,733] Length=321 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 115/288 (40%), Positives = 174/288 (61%), Gaps = 3/288 (1%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 R +R W F+APN VF L P+ FSL ++F KWD F+ F LDNFR + +D Sbjct 37 RRKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKM-ANDE 95 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 F I++ NT +YT V T++ SL +A LN+KI+G+ LFRT+ F P S V +AVVW Sbjct 96 TFWISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVW 155 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +F+ G +NI L P W WA+ ++ +VS+WR + + ++ LA +Q + Sbjct 156 NMLFHPTMGPINIFLRRFIEHPPGWTSNSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQ 215 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPET 244 + +YEA+ +DGA +QF+ +T+P +R FV ++ +I+ F+ FDLV V+T +GGP Sbjct 216 KELYEASSLDGANRWKQFLDVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMT--DGGPGR 273 Query 245 ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 AT VL ++ AF +FGYASA++ V+F I+L +TV+Q RR+ Sbjct 274 ATNVLVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRRT 321 >gi|269839477|ref|YP_003324169.1| binding-protein-dependent transporters inner membrane component [Thermobaculum terrenum ATCC BAA-798] gi|269791207|gb|ACZ43347.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] Length=314 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 109/298 (37%), Positives = 185/298 (63%), Gaps = 5/298 (1%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 RGR + G +F P + +++F +P+ +S Y+SF ++++ + FV L N+ + D Sbjct 15 RGRESLDGLLFAGPAILGLLIFTAYPIIYSFYLSFTEYNIISPPRFVGLANYEQMLLQDQ 74 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 LF ++ T Y+V ++ ++I+S +VA +N+K++GI+ +RT+ +LP + + A +W Sbjct 75 LFRTSLKATLYYSVVSIPASLILSFLVALLMNQKVRGIAFYRTIWYLPSLVPAAAGAALW 134 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +++ N D GLLNIMLG LG+ WLIEPRW + SL ++ +W + +V LA +QGVP Sbjct 135 RWILNRDFGLLNIMLGNLGLPTPGWLIEPRWTIPSLVMIGLWMGLGSTMLVFLAGLQGVP 194 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG---- 240 +YEAA IDGA +F IT+P++ + F +++ II++FQ F +VY++ G Sbjct 195 THLYEAAEIDGANFWHKFRHITIPMMSPIIFFNLILGIINSFQVFTIVYLIYTPTGSGSA 254 Query 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR-RSWEASR 297 GP + + L+++AF + + GYA+AL+WV+F I++VLT L + HR +EA R Sbjct 255 GPSDSALFYMVYLYRNAFQYFKVGYAAALSWVLFLIIVVLTYLMFKFQHRWVYYEAER 312 >gi|293567478|ref|ZP_06678825.1| ABC transporter, permease protein [Enterococcus faecium E1071] gi|291589875|gb|EFF21676.1| ABC transporter, permease protein [Enterococcus faecium E1071] Length=298 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 115/288 (40%), Positives = 175/288 (61%), Gaps = 3/288 (1%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 R +R W F+APN VF L P+ FSL ++F KWD F+ F LDNFR + +D Sbjct 14 RRKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKM-ANDE 72 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 F I++ NT +YT V T++ SL +A LN+KI+G+ LFRT+ F P S V +AVVW Sbjct 73 TFWISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVW 132 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +F+ G +NI L P W WA+ ++ +VS+WR + + ++ LA +Q + Sbjct 133 NMLFHPTVGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQ 192 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPET 244 + +YEA+ +DGA +QF+++T+P +R FV ++ +I+ F+ FDLV V+T +GGP Sbjct 193 KELYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMT--DGGPGR 250 Query 245 ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 AT VL ++ AF +FGYASA++ V+F I+L +TV+Q RR+ Sbjct 251 ATNVLVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRRT 298 >gi|332672116|ref|YP_004455124.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas fimi ATCC 484] gi|332341154|gb|AEE47737.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas fimi ATCC 484] Length=324 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 119/290 (42%), Positives = 183/290 (64%), Gaps = 4/290 (1%) Query 1 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF 60 +TRRR A +F++P L V F+L P+ S+Y+S +WD FT FV DN+ Sbjct 30 LTRRRKVEARYFWLFISPWLIGFVGFLLGPMIASVYISLTEWDSFTPPQFVGFDNYTRAL 89 Query 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 T DP+F A+ NT Y + +V +++ + +A LN+K++G LFRT ++LP + V Sbjct 90 TDDPIFWKALGNTFFYALVSVPLGLVIGVWLANLLNKKVRGRKLFRTFIYLPTLVPLVAT 149 Query 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 A+V++ V +G LN +LG +G+ WL++P W +L ++S W ATV+LL+AM Sbjct 150 AMVFKMVL-APSGPLNDLLGVVGVQGPDWLLDPTWVKPALVVLSAW-GAGGATVLLLSAM 207 Query 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 G+P+ YEAA IDGAG IRQF SIT P I + F +++ +I AFQ F VY+LT +G Sbjct 208 NGIPKEFYEAAEIDGAGPIRQFWSITFPQITPIIFFNLIMGLIGAFQIFGQVYILT--SG 265 Query 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 GP+ A+ ++ +LF+ AFSF FGYASA+AW++F +++V T++ R + + Sbjct 266 GPDNASMMMVPLLFREAFSFYHFGYASAIAWLLFLVIIVFTIIAFRTSKK 315 >gi|15616251|ref|NP_244556.1| sugar transport system (permease) [Bacillus halodurans C-125] gi|10176313|dbj|BAB07408.1| sugar transport system (permease) [Bacillus halodurans C-125] Length=300 Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 118/294 (41%), Positives = 194/294 (66%), Gaps = 5/294 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFT-HATFVRLDNFRNLF 60 ++R R A+ G F+ P L + VF+L P+ +++Y+SFQK +L + FV +N+ + Sbjct 7 SKRAIREAFQGYAFLTPALVTIGVFILLPILYAIYLSFQKVNLLAGFSEFVGFNNYARI- 65 Query 61 TSDPLFLIAVVNTAVYTVGTVVPT-VIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVV 119 T D IA+ NTA Y V VVPT I++L++AA LN KIKG + FR V FLP SS V Sbjct 66 TDDYRAGIALRNTAFY-VAIVVPTQTILALILAACLNAKIKGTNFFRVVFFLPTLTSSAV 124 Query 120 MAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAA 179 +A+++ F++N NGL+N +L LG+ WL +P A++++ ++++W + PF V+ LAA Sbjct 125 LALIFMFMYNNQNGLVNQVLASLGLPTYNWLGDPSVALLAIMIMNIWATAPFYMVIYLAA 184 Query 180 MQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGAN 239 ++ +P ++YEAA +DGA I++F ITVP++R SFVV++ II FQ FD Y+ +G + Sbjct 185 LKDIPASLYEAADLDGASTIQKFRYITVPMLRPITSFVVIMGIIGTFQLFDQSYIFSGGS 244 Query 240 GGPETATYVLGIMLFQHAF-SFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 GGP+ +T + ++++Q+AF S+ + GYA+ALA+++ I+L+ T++Q + Sbjct 245 GGPDNSTLTIVLLIYQYAFQSYDQMGYAAALAFLLAVIILIATLIQRKFQKNEQ 298 >gi|297199274|ref|ZP_06916671.1| sugar ABC transporter permease [Streptomyces sviceus ATCC 29083] gi|197716456|gb|EDY60490.1| sugar ABC transporter permease [Streptomyces sviceus ATCC 29083] Length=301 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 121/292 (42%), Positives = 179/292 (62%), Gaps = 4/292 (1%) Query 1 MTRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLF 60 M+R R R A +FV+P + + F+L P+ S+Y S WD FT +V +DN+ L Sbjct 3 MSRLRRREALWFYVFVSPWVIGFLAFLLGPMISSIYFSMTDWDSFTPPKWVGMDNYTKLL 62 Query 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 T DP+F A+ NT Y +V ++V L +A LN++++ LFRT+++LP + V Sbjct 63 TDDPIFWKALGNTLFYAAVSVPLGLLVGLWLANLLNKQVRARKLFRTLIYLPTLVPLVAA 122 Query 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 ++ ++ V +G LN +LGW+GI WL++P W +L L+SVW + ATV+LLAAM Sbjct 123 SLAFRVVL-APSGPLNDVLGWVGIKGPQWLLDPSWVKYALILLSVWGAGS-ATVLLLAAM 180 Query 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 +G+P +YEAA IDGAG +RQF SITVP + + F +V+ +I AFQ F VY+L Sbjct 181 KGIPRELYEAAEIDGAGPVRQFWSITVPQLTPVIFFNLVMGLIAAFQVFSQVYILMPKAS 240 Query 241 GPET--ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 P T A+ + LF AFS+ GYASA++W++FA++LV T+L R T R Sbjct 241 QPGTYNASQTMVPYLFDQAFSYYHMGYASAISWLLFAVILVFTLLAFRTTRR 292 >gi|294614267|ref|ZP_06694186.1| ABC transporter, permease protein [Enterococcus faecium E1636] gi|291592926|gb|EFF24516.1| ABC transporter, permease protein [Enterococcus faecium E1636] Length=295 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/288 (40%), Positives = 174/288 (61%), Gaps = 6/288 (2%) Query 5 RGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDP 64 R +R W F+APN VF L P+ FSL ++F KWD F+ F LDNFR + +D Sbjct 14 RRKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKM-ANDE 72 Query 65 LFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVW 124 F I++ NT +YT V T++ SL +A LN+KI+G+ LFRT+ F P S V +AVVW Sbjct 73 TFWISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVW 132 Query 125 QFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVP 184 +F+ G +NI L P W WA+ ++ +VS+WR + ++ LA +Q + Sbjct 133 NMLFHPTVGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGM---GILYLAGLQSIQ 189 Query 185 ETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPET 244 + +YEA+ +DGA +QF+++T+P +R FV ++ +I+ F+ FDLV V+T +GGP Sbjct 190 KELYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMT--DGGPGR 247 Query 245 ATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 AT VL ++ AF +FGYASA++ V+F I+L +TV+Q RR+ Sbjct 248 ATNVLVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRRT 295 >gi|325265053|ref|ZP_08131780.1| sugar ABC transporter, permease protein [Clostridium sp. D5] gi|324029743|gb|EGB91031.1| sugar ABC transporter, permease protein [Clostridium sp. D5] Length=308 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 106/289 (37%), Positives = 184/289 (64%), Gaps = 4/289 (1%) Query 4 RRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSD 63 + W G F+AP L +VF P+ SLY S ++D + F+ L N+ +F + Sbjct 17 QHNENLW-GYFFIAPALIIFLVFYAVPIVMSLYYSLTRFDGISEPVFIGLLNYLKVFRNR 75 Query 64 PLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVV 123 F +++ NT +T GTV+ I+SL A LN+KI+G FR FLP +S + A+V Sbjct 76 E-FWLSLGNTFCFTAGTVIAGTIISLFFAVLLNKKIRGRGWFRAAFFLPYIVSYIAAAMV 134 Query 124 WQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGV 183 WQ+++ D+G++N++L GI P WL WAM+++ ++S+W+++ F ++LL+ +Q + Sbjct 135 WQWMYQPDSGIINVVLEAFGITPPLWLGSTTWAMIAVIVMSIWKTLGFNLIILLSGLQSI 194 Query 184 PETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPE 243 +YEAA +DGA +++ F +TVPL++ + FVV+ SII QAFD +Y++TG GGP Sbjct 195 SAELYEAAALDGATQVQSFFKLTVPLLKNTVLFVVLNSIITGLQAFDQIYIMTG--GGPL 252 Query 244 TATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 +T + +++Q++F + + GYASA+++V+FA++ + ++ LR+T+RR+ Sbjct 253 KSTQTVVYLIYQNSFLYFKQGYASAMSYVLFAVIFAVGLILLRVTNRRN 301 >gi|269839075|ref|YP_003323767.1| binding-protein-dependent transporters inner membrane component [Thermobaculum terrenum ATCC BAA-798] gi|269790805|gb|ACZ42945.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] Length=305 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 109/280 (39%), Positives = 174/280 (63%), Gaps = 2/280 (0%) Query 12 GRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVV 71 G F +P + ++ F +PL S Y SF + LF A ++ L N+R+L + D + +++ Sbjct 22 GLFFTSPAIIGLLWFTAYPLLASFYYSFTSYSLFGGAKWIGLQNYRDLMSDDNWW-VSLY 80 Query 72 NTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTD 131 NT VG++ +I +LV+A LN K++G++++RT+ +LP + +V AVVW +VFN Sbjct 81 NTVYILVGSIPLGIITALVLALLLNMKVRGMAIYRTLFYLPSIVPAVASAVVWAYVFNPQ 140 Query 132 NGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAA 191 G+LN +L GI WL P WA +L ++SVW + ++LLA +Q VP+ +Y+AA Sbjct 141 YGILNNILRIFGINGPGWLASPTWAKPALIIMSVWGAGNL-MIILLAGLQDVPQEIYDAA 199 Query 192 RIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGI 251 ++DGAG F ++T+P + L + +V +I FQ F YVLTG NGGP +T + + Sbjct 200 KVDGAGWWASFWNVTLPFLSPHLFYALVTGLIAGFQYFTPAYVLTGGNGGPARSTLIAAL 259 Query 252 MLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRR 291 L+Q+AF + + GYASA+AW++F I+LV+T+L R RR Sbjct 260 YLYQNAFRYFKMGYASAMAWILFLIILVITLLTFRTLSRR 299 >gi|329927606|ref|ZP_08281769.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328938395|gb|EGG34785.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length=298 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 115/295 (39%), Positives = 180/295 (62%), Gaps = 8/295 (2%) Query 3 RRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHA-TFVRLDNFRNLFT 61 R G+ A M +APN+ + VF LF + +S Y+SF + DLF + T V LDN+ F Sbjct 6 RMFGKDAAVAWMLIAPNVIWIAVFTLFAIFYSFYLSFTEVDLFANQFTLVGLDNYTQSF- 64 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 +DP+F ++VNT V+T+ TV ++ +++VVA LN KIKG L R FLP + + +A Sbjct 65 ADPVFTKSIVNTTVFTIFTVAFSMAIAIVVAVLLNSKIKGRKLMRAAFFLPSILPIIAVA 124 Query 122 VVWQFVFNTDNGLLNIMLGWLGIG----PIPWLIEPRWAMVSLCLVSVWRSVPFATVVLL 177 VW +++ GLLN L +G+G P WL+ P AM+S+ + S+W+S + V+ L Sbjct 125 QVWIWIYEPSYGLLNYFLEKIGVGNPSHPFQWLVSPDTAMLSVIIFSIWKSFGYNMVIYL 184 Query 178 AAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTG 237 AA+QGV ++YEAA IDGA +++F IT+P +R A F+++ SI +FQ F +Y LT Sbjct 185 AALQGVSRSLYEAAEIDGANAVQKFFRITIPGLRPATFFILITSISGSFQTFGEIYALT- 243 Query 238 ANGGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 NGGP T ++ ++Q+AF F + G ASA++ ++F +L +T+ Q ++ Sbjct 244 -NGGPMNQTNMIAYYIYQYAFEFFKIGRASAVSVLLFILLFAITIWQWNSYQKKE 297 >gi|269925946|ref|YP_003322569.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] gi|269789606|gb|ACZ41747.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] Length=309 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 120/302 (40%), Positives = 182/302 (61%), Gaps = 14/302 (4%) Query 1 MTRRRG--------RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFT-HATFV 51 +TRR G RR W +F++P L VF +F +GFS Y+SF +W++ FV Sbjct 8 LTRRSGLSRVLYEARREWTAYLFLSPGLILFAVFTVFSVGFSFYLSFHQWNILEPQKPFV 67 Query 52 RLDNFRNLFTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFL 111 + N+R L D FL A+VNT + +V T+ + L+VA LN +I+ LFRT+ +L Sbjct 68 GMQNYRELL-HDRYFLGAIVNTLYFAAVSVPVTMAIGLLVALMLNTQIRFRGLFRTLYYL 126 Query 112 PLAISSVVMAVVWQFVFNTDNGLLNIMLGWLGI--GPIPWLIEPRWAMVSLCLVSVWRSV 169 P S VV A++W++VF+ D GLLN L L I PI WL + AM ++ VSVW+ V Sbjct 127 PGVTSLVVAAIIWKWVFSGDYGLLNYYLLKLHIIDKPILWLSDRNLAMPAVITVSVWQGV 186 Query 170 PFATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAF 229 F VV LAA+Q +P+ +Y+AA++DGA R+ + ITVPL+R + F V+++I + Q F Sbjct 187 GFHMVVYLAALQSIPQEIYDAAKVDGASAFRRLIYITVPLLRPTMFFQFVVAMIGSLQVF 246 Query 230 DLVYVLTGANGGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITH 289 + ++TG GGP T + L+Q AF E GYA+A+A+ +FA+++V T++ R+ + Sbjct 247 GQILLMTG--GGPIRRTTTVAFYLYQKAFRDFEMGYAAAIAYCLFAMMIVFTIIYWRLAY 304 Query 290 RR 291 R Sbjct 305 RE 306 >gi|21221925|ref|NP_627704.1| binding protein dependent transport protein [Streptomyces coelicolor A3(2)] gi|4678630|emb|CAB41203.1| putative binding protein dependent transport protein [Streptomyces coelicolor A3(2)] Length=327 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 115/281 (41%), Positives = 187/281 (67%), Gaps = 5/281 (1%) Query 14 MFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHA-TFVRLDNFRNLFTSDPLFLIAVVN 72 + +AP+L +V ++ P+ + ++F +D+ TF LDNF+ +F SDP + ++ + Sbjct 47 LLLAPSLVHLVWWIGLPVVATFALAFTDYDILAGTVTFNGLDNFQEIF-SDPTWNASIWH 105 Query 73 TAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDN 132 T V+T TV +++++V+A LN K++G + +RT VFLP ++V +A+VW ++F Sbjct 106 TVVFTFFTVPVAMVIAVVLALLLNVKMRGAAWYRTAVFLPHVTATVAIALVWMWMFEPRL 165 Query 133 GLLNIMLGWLGI-GPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAA 191 G++N MLGW+GI GP+ WL +P WA+ ++ +VS+W+ + ++ LAA+Q +P VYEAA Sbjct 166 GVVNTMLGWIGIDGPV-WLADPDWALTAVIVVSIWKGIGIKMLIYLAALQAMPNDVYEAA 224 Query 192 RIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGI 251 RIDGA ++RQF SIT+PL++ A FV+V+SII +FQAFD +YVLT +GGP +T V+ Sbjct 225 RIDGASQVRQFFSITLPLLKPATFFVLVVSIIDSFQAFDQLYVLT-PDGGPGNSTTVMTY 283 Query 252 MLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 +++ AF G A A + V+FA LLVL ++ R+T + Sbjct 284 EIYRTAFKEFNMGAACAQSVVLFAFLLVLMLISRRLTGKED 324 >gi|334138510|ref|ZP_08511928.1| ABC transporter, permease protein [Paenibacillus sp. HGF7] gi|333603921|gb|EGL15317.1| ABC transporter, permease protein [Paenibacillus sp. HGF7] Length=305 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 114/302 (38%), Positives = 183/302 (61%), Gaps = 14/302 (4%) Query 2 TRRRGRR----------AWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFV 51 T RR R AWA +F+AP + +F LFP SL +SF KW+ T F Sbjct 4 TNRRSRAGGWAHYRIEAAWA-YLFIAPAFLCLAIFHLFPAAASLVLSFTKWNGLTAPVFN 62 Query 52 RLDNFRNLFTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFL 111 L N+ L D F+ ++++TA +++ TV +V+++ +A LNRK+KG+SL+R + FL Sbjct 63 GLLNYAALL-KDKEFIQSILHTATFSIVTVPVSVVLATALAVLLNRKMKGVSLYRVIYFL 121 Query 112 PLAISSVVMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPF 171 P+ S + ++W++++N + G +N +LGWL + W+ +P + M+S+ +VSVW +V + Sbjct 122 PVVTMSTAVGMIWKWLYNAEFGPINYILGWLHLPQPNWISDPAYTMLSIMIVSVWSTVGY 181 Query 172 ATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDL 231 V+LLA +QG+ + YEAAR+DGA F IT+PL+ +L FV++IS+IHA Q FDL Sbjct 182 NMVILLAGLQGISGSYYEAARMDGASARYLFFGITLPLLSPSLFFVLMISVIHALQVFDL 241 Query 232 VYVLTGANGGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRR 291 V+V+TG N AT + ++ F GYASA A V+F ++ +T++Q+ + +R Sbjct 242 VFVMTGGNAALLEATRTVVYNMYDQGFVLFRMGYASAQAVVLFVLIFAMTLVQMAL--QR 299 Query 292 SW 293 W Sbjct 300 KW 301 >gi|148655502|ref|YP_001275707.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] gi|148567612|gb|ABQ89757.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] Length=316 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/282 (41%), Positives = 184/282 (66%), Gaps = 4/282 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 +RR+ A +F+AP + +++F L P+ S +SF ++++ T + L N+ LF Sbjct 20 SRRQRIEAINAYIFMAPAILGLLLFTLGPMAASFLLSFTEYNILTDPRWNGLANYEKLF- 78 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 +D LF ++ +A+Y++ +V + ++L +A LN K++GI +FR+V +LP IS V +A Sbjct 79 NDKLFWQSLRVSAIYSIVSVPLGLTIALGLALLLNHKMRGIMVFRSVYYLPTVISGVGVA 138 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 ++W+++FN D G++N++L +GI WL + WA+V+L + S+W + ++ LA +Q Sbjct 139 MLWRWLFNGDFGIINVLLRGVGIRGPNWLFDETWALVALIIASLW-GIGGTMLIFLAGLQ 197 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 G+P+ +YEAA IDGAG RQF SIT+P+I F +V+ +I A Q F YV+TG GG Sbjct 198 GIPQELYEAAEIDGAGRWRQFSSITLPMISHVTFFNLVLGVIGALQVFTDAYVITG--GG 255 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVL 283 P AT L + L++HAF +L FGYA+A+AWV+F I+L LT+L Sbjct 256 PNNATLFLSVYLYRHAFQYLNFGYAAAVAWVLFLIVLALTLL 297 >gi|334137923|ref|ZP_08511347.1| ABC transporter, permease protein [Paenibacillus sp. HGF7] gi|333604456|gb|EGL15846.1| ABC transporter, permease protein [Paenibacillus sp. HGF7] Length=317 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 117/296 (40%), Positives = 178/296 (61%), Gaps = 9/296 (3%) Query 3 RRRGRRAWAGR---MFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNL 59 R+ G+ G+ + V+P L +VF+ PL SLY SF ++D+ + LDN+ L Sbjct 18 RKLGKLDQEGKWGLLLVSPYLLHFIVFVAGPLIASLYFSFSQYDMMNPPKWTGLDNYGRL 77 Query 60 FTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVV 119 F D LF ++ NT + V V I++L++A LN+K+KG+ LFR F+P+ S V Sbjct 78 F-GDALFWKSLWNTLYFAVLFVPAQTILALILAVVLNQKLKGLKLFRMAHFIPVISSWTV 136 Query 120 MAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAA 179 + V +FN G N +L LG+ P WL + + + L L++VW+ + + V+ LA Sbjct 137 ILYVSDAIFNPRFGFANSILASLGLDPQRWLQDGKLVIPLLVLIAVWKGIGYIMVIYLAG 196 Query 180 MQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGAN 239 +Q VP+ +YEAA IDGAG +R+F+SIT PLI VV++S I FQAF+ VYVLTG Sbjct 197 LQSVPQDLYEAAEIDGAGTLRKFLSITFPLISPTTFLVVILSTISTFQAFEQVYVLTGGG 256 Query 240 -----GGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 GGP ++ VL + L++ F+F+ GYASA+AWV+F IL LT++Q+++ + Sbjct 257 DISSAGGPNNSSLVLMLYLYREGFTFMRMGYASAIAWVLFMILFTLTLIQMKVQKK 312 >gi|160935669|ref|ZP_02083044.1| hypothetical protein CLOBOL_00559 [Clostridium bolteae ATCC BAA-613] gi|158441413|gb|EDP19123.1| hypothetical protein CLOBOL_00559 [Clostridium bolteae ATCC BAA-613] Length=299 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 113/286 (40%), Positives = 182/286 (64%), Gaps = 6/286 (2%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 +R G M+V + +VF L+P SL SF +D+F FV LDN+ LFT D F Sbjct 13 KRNRIGFMYVCIWIFGFLVFQLYPFISSLLYSFTNYDIFHAPEFVGLDNYVRLFTKDREF 72 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAIS-SVVMAVVWQ 125 ++ T YT TV V+++L++A LNR +KGI+ RTV ++P +S SV +A++W+ Sbjct 73 WNSMAVTLKYTFITVPGKVVLALIIAVILNRNLKGINFIRTVYYIPSLLSGSVAVAILWK 132 Query 126 FVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPE 185 +F D G +N +LG + IGP+ WL P A++++C++ +W+ + V+ L+A++ VP+ Sbjct 133 VLFMND-GFINSLLGLVHIGPVKWLGTPDMAVITICMLEIWQ-FGSSMVLFLSALKQVPQ 190 Query 186 TVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETA 245 ++YEAARIDGA + R F IT+P+I F +++ +I A Q F +V+T NGGP A Sbjct 191 SLYEAARIDGASKPRMFFKITLPMITSIAFFNIIMQLITALQNFTSAFVVT--NGGPNKA 248 Query 246 TYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRR 291 TYVLG+ L+ AF + + GYA A +W++F ++LV+T++ L +T ++ Sbjct 249 TYVLGMKLYTDAFKYFKMGYACATSWILFMVILVMTII-LFVTSKK 293 >gi|29376740|ref|NP_815894.1| ABC transporter permease [Enterococcus faecalis V583] gi|255972189|ref|ZP_05422775.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255975302|ref|ZP_05425888.1| conserved hypothetical protein [Enterococcus faecalis T2] 47 more sequence titles Length=300 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 114/291 (40%), Positives = 167/291 (58%), Gaps = 3/291 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 + R + W F+APN +F L P+ SL ++F WD F+ FV + NF + Sbjct 11 NKLRRKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFVGMKNFTKMIH 70 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 D F I++ T +YT+G V T+I SL +A LNRKI+G+ FRT F P S V +A Sbjct 71 DD-TFWISLKQTFIYTIGVVPLTLICSLGLAILLNRKIRGMKFFRTAFFFPYVTSLVAIA 129 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 VVW +F+ G +N L P W WA+ ++ +VSVWR + + ++ LA +Q Sbjct 130 VVWNMLFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYYMILYLAGLQ 189 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 VP +YEAA +DGAG+ QF+++T+P +R FV ++ +I+ F+ FDLV V+TG GG Sbjct 190 SVPRELYEAASMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTG--GG 247 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 P AT VL ++ AF FGYASA+A V+F I+L +TV Q + + Sbjct 248 PGRATNVLVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQFKWNQHQE 298 >gi|315648246|ref|ZP_07901347.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] gi|315276892|gb|EFU40235.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] Length=312 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 107/292 (37%), Positives = 186/292 (64%), Gaps = 5/292 (1%) Query 3 RRRGR----RAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRN 58 R+ G+ A G +F+ P + + +F + P SL++SF WD T FV +DNF N Sbjct 17 RKVGKLARHEALWGYIFILPVVLGLGLFYMAPSAASLFLSFTSWDGLTSPQFVGIDNFTN 76 Query 59 LFTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSV 118 L D F +++NT +YTVGTV +V ++ V+A LN+KI+G+ +RT+ F+P+ + Sbjct 77 LMKDDK-FTGSLLNTMLYTVGTVPLSVAIATVLAVLLNQKIRGMVFYRTLYFIPVITMPI 135 Query 119 VMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLA 178 + +VW++++N++ GL+N +LG L + WL + ++A+ S+ LVSVW S+ + V+LL+ Sbjct 136 AVGMVWKWLYNSEFGLINHVLGVLNLPQPNWLFDEKFALFSIVLVSVWSSIGYNAVILLS 195 Query 179 AMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGA 238 +QG+ + YEAA +DGAG + +F IT+PL+ +L FV+V+S I++FQ FDL++++ Sbjct 196 GLQGISSSYYEAASLDGAGTMYKFFRITLPLLTPSLFFVLVMSFINSFQVFDLIFIMMDQ 255 Query 239 NGGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 +T + +++ F + GYASA A+++F ++LV+T++Q+ I R Sbjct 256 QTTMLESTRTVVYSIWEDGFKYFNMGYASAQAFILFVVILVITMVQMYIQKR 307 >gi|325567135|ref|ZP_08143802.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158568|gb|EGC70714.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length=300 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 111/291 (39%), Positives = 171/291 (59%), Gaps = 3/291 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 + + + F+APN +F L P+ FSL ++F +WD F+ FV + NF + Sbjct 11 NKLKRKNTLTALSFIAPNFIGFFLFTLVPVVFSLILAFMEWDSFSSPEFVGMKNFSKMLG 70 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 D F I++ NT +YT+G V T++ SL +A LN+K++G+ FRT F P S V +A Sbjct 71 DDT-FWISLKNTFLYTIGVVPLTLVCSLGLAILLNKKVRGMKFFRTAFFFPYVTSLVAIA 129 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 VVW +F+ G +N L + P W WA+ ++ +VSVWR + + ++ LA +Q Sbjct 130 VVWNMLFHPTMGPINQFLKFFIENPPGWTSSSDWALTAIIIVSVWRGMGYYMILYLAGLQ 189 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 VP+ +YEAA IDGA + +QF ++T+P +R FV ++ +I+ F+ FDLV V+T GG Sbjct 190 SVPKELYEAASIDGANKWQQFRNVTLPSLRPTTFFVSIMLVINCFKIFDLVQVMTA--GG 247 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 P AT VL ++ AF FGYASA+A V+F I+L +TV+Q + R+ Sbjct 248 PGRATNVLVYQIYNEAFVKFNFGYASAIAMVLFVIVLGITVIQFKWNQRQE 298 >gi|315576589|gb|EFU88780.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] Length=300 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 114/291 (40%), Positives = 167/291 (58%), Gaps = 3/291 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 + R + W F+APN +F L P+ SL ++F WD F+ FV + NF + Sbjct 11 NKLRRKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFVGMKNFTKMIH 70 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 D F I++ T +YT+G V T+I SL +A LNRKI+G+ FRT F P S V +A Sbjct 71 DD-TFGISLKQTFIYTIGVVPLTLICSLGLAILLNRKIRGMKFFRTAFFFPYVTSLVAIA 129 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 VVW +F+ G +N L P W WA+ ++ +VSVWR + + ++ LA +Q Sbjct 130 VVWNMLFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYYMILYLAGLQ 189 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 VP +YEAA +DGAG+ QF+++T+P +R FV ++ +I+ F+ FDLV V+TG GG Sbjct 190 SVPRELYEAASMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTG--GG 247 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 P AT VL ++ AF FGYASA+A V+F I+L +TV Q + + Sbjct 248 PGRATNVLVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQFKWNQHQE 298 >gi|266619800|ref|ZP_06112735.1| transmembrane permease MsmF [Clostridium hathewayi DSM 13479] gi|288868586|gb|EFD00885.1| transmembrane permease MsmF [Clostridium hathewayi DSM 13479] Length=303 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 111/286 (39%), Positives = 181/286 (64%), Gaps = 6/286 (2%) Query 7 RRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLF 66 +R G ++V + +VF L+P SL+ SF +D+F FV LDN+ LFT D F Sbjct 17 KRNRIGFLYVCIWIFGFLVFQLYPFVSSLFYSFTSYDIFHKPEFVGLDNYVRLFTKDKEF 76 Query 67 LIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAIS-SVVMAVVWQ 125 ++ T YT TV V+++L++A LNR++KGI+ RTV ++P +S SV +A++W+ Sbjct 77 WNSLTVTLKYTFITVPGKVVLALIIAMILNRELKGINFIRTVYYIPSLLSGSVAVAILWK 136 Query 126 FVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPE 185 +F D G +N +LG + I P+ WL P A+ ++C++ +W+ + V+ L+A++ VP+ Sbjct 137 VLFMND-GFINSLLGVIHIAPVKWLGRPEMALTTICMLEIWQ-FGSSMVLFLSALKQVPQ 194 Query 186 TVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETA 245 ++YEAARIDGA +R F IT+P+I F +++ +I A Q F +V+T NGGP A Sbjct 195 SLYEAARIDGASRVRIFFKITLPMITSIAFFNIIMQLITALQNFTSAFVVT--NGGPNKA 252 Query 246 TYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRR 291 TYVLG+ L+ AF + + GYA A +W++F I++++T++ L T R+ Sbjct 253 TYVLGMKLYTDAFKYFKMGYACATSWILFVIIMIMTLI-LFATSRK 297 >gi|261408086|ref|YP_003244327.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261284549|gb|ACX66520.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length=313 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 105/292 (36%), Positives = 187/292 (65%), Gaps = 5/292 (1%) Query 3 RRRGRRAWA----GRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRN 58 R+ G+ A+ G +F+ P + + +F + P SL++SF WD T F+ LDNF N Sbjct 18 RKVGKLAFHEAMWGYIFILPVVLGLGLFYMAPSAASLFLSFTSWDGLTAPQFIGLDNFAN 77 Query 59 LFTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSV 118 L D F +++NT +YT+GTV +V ++ V+A LN+KIKG+ +RT+ F+P+ + Sbjct 78 LMKDDK-FTGSMLNTMLYTIGTVPLSVALATVLAVLLNQKIKGMVFYRTLYFIPVITMPI 136 Query 119 VMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLA 178 + +VW++++N++ GL+N +LG + + WL + ++A+ S+ LVSVW S+ + V+LL+ Sbjct 137 AVGMVWKWLYNSEFGLINHVLGVMNLPQPNWLFDEKFALFSIVLVSVWSSIGYNAVILLS 196 Query 179 AMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGA 238 +QG+ + YEAA +DGAG + +F IT+PL+ +L FV+V+S I++FQ FDL++++ Sbjct 197 GLQGISGSYYEAASLDGAGTLYKFFRITLPLLTPSLFFVLVMSFINSFQVFDLIFIMMDQ 256 Query 239 NGGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 +T + +++ F + GYASA A+++F ++L++T++Q+ I R Sbjct 257 QTTMLESTRTVVYSIWEDGFKYFNMGYASAQAFILFVVILIITMVQMYIQKR 308 >gi|251796585|ref|YP_003011316.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247544211|gb|ACT01230.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length=296 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 105/289 (37%), Positives = 176/289 (61%), Gaps = 3/289 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 ++ R + G +F++P + ++ F+LFP+ S Y+ F +WD + DNF +F Sbjct 5 SKLNKRENFWGYLFISPQIIGLLSFVLFPVAMSFYLMFTEWDFTNAPKWTGTDNFNVIFH 64 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 + F A+ NT + +G V T ++SL++A NR IKG+S+++ FLP+ SSV + Sbjct 65 EEN-FYYALRNTLYFVLGIVPVTTVISLIMALLTNRAIKGLSIYKAAFFLPMVTSSVAIV 123 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 +VW +VF D GLLN L +GI WL E WA +++ ++S W+ + + ++ LA ++ Sbjct 124 LVWYWVFAPDIGLLNNFLDVIGITGPNWLTEAFWARIAIVIMSTWQGMGYYYLIFLAGLK 183 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 G+PE YEAA IDGAG++R+F +IT+PL+ F++V +I F F ++LTG GG Sbjct 184 GIPEDYYEAAEIDGAGKLRKFFNITLPLLSPTTFFIIVTMLIGVFNLFQESFILTG--GG 241 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 P +TY L + ++ AF + G A+ ++ V+FAI+L++T +Q R++ R Sbjct 242 PAFSTYTLVMYIYDLAFRYFRMGEAAVVSVVLFAIVLLVTFIQFRLSKR 290 >gi|329923000|ref|ZP_08278516.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328941773|gb|EGG38058.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length=307 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 105/292 (36%), Positives = 186/292 (64%), Gaps = 5/292 (1%) Query 3 RRRGRRAWA----GRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRN 58 R+ G+ A+ G +F+ P + + +F + P SL++SF WD T F+ LDNF N Sbjct 12 RKVGKLAFHEAMWGYIFILPVVLGLGLFYMAPSAASLFLSFTSWDGLTAPQFIGLDNFAN 71 Query 59 LFTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSV 118 L D F +++NT +YT+GTV +V ++ V+A LN+KIKG+ +RT F+P+ + Sbjct 72 LMKDDK-FTGSMLNTMLYTIGTVPLSVALATVLAVLLNQKIKGMVFYRTFYFIPVITMPI 130 Query 119 VMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLA 178 + +VW++++N++ GL+N +LG + + WL + ++A+ S+ LVSVW S+ + V+LL+ Sbjct 131 AVGMVWKWLYNSEFGLINHVLGVMNLPQPNWLFDEKFALFSIVLVSVWSSIGYNAVILLS 190 Query 179 AMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGA 238 +QG+ + YEAA +DGAG + +F IT+PL+ +L FV+V+S I++FQ FDL++++ Sbjct 191 GLQGISGSYYEAASLDGAGTLYKFFRITLPLLTPSLFFVLVMSFINSFQVFDLIFIMMDQ 250 Query 239 NGGPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 +T + +++ F + GYASA A+++F ++L++T++Q+ I R Sbjct 251 QTTMLESTRTVVYSIWEDGFKYFNMGYASAQAFILFVVILIITMIQMYIQKR 302 >gi|315644692|ref|ZP_07897823.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] gi|315279951|gb|EFU43250.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] Length=309 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 109/286 (39%), Positives = 181/286 (64%), Gaps = 7/286 (2%) Query 4 RRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFT---HATFVRLDNFRNLF 60 R+ + WAG +++ P L +++F + P+ FSL ++F KWD+ T +V LDNF+ +F Sbjct 13 RKSKSDWAGYLYIMPWLLGLLLFTIGPMLFSLLLAFSKWDIITGVQSIEWVGLDNFKAIF 72 Query 61 TSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVM 120 D LF ++ T ++ + +V IVSL++A LN + +G+++FR + F+P I +V + Sbjct 73 -HDELFYQSLKVTFIFALVSVPLYQIVSLLIAVLLNMRSRGMNVFRLIYFMPSVIPAVAV 131 Query 121 AVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAM 180 +++W +FN + G+LN LGW GI WL +P +A+ +L ++ +W V ++ L+ + Sbjct 132 SMMWVMIFNPEYGILNKALGWFGIQGPAWLQDPSYALGALIVMGIW-GVGNTIIIYLSGL 190 Query 181 QGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANG 240 Q VPE ++EAA +DGAG IR+F SIT+P+I + F +++ II FQ F +V+T NG Sbjct 191 QSVPEDMHEAAELDGAGRIRRFFSITLPMISPTVFFNLIMGIIGGFQYFTQAFVMT--NG 248 Query 241 GPETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLR 286 GP +T + L+ AF E GYASAL+W++F I+LV T++ +R Sbjct 249 GPLNSTLFYNLYLYNKAFQDYEMGYASALSWILFVIILVFTLIVIR 294 >gi|226315389|ref|YP_002775285.1| ABC transporter permease [Brevibacillus brevis NBRC 100599] gi|226098339|dbj|BAH46781.1| probable ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length=313 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 109/288 (38%), Positives = 176/288 (62%), Gaps = 3/288 (1%) Query 3 RRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTS 62 + +GR +F+ P + + F L P+ FSL MSF W + TFV LDN+ N+FT Sbjct 14 KLKGRAFLTPYLFILPWILGFLAFTLGPMLFSLVMSFFDWPVVGEVTFVGLDNYINMFTD 73 Query 63 DPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAV 122 DPLF ++ T + + V + ++L +A LN+K+KG FRTV +LP IS V +A+ Sbjct 74 DPLFWQSLWVTIKFALLFVPLNLFIALFLAMMLNQKVKGSGFFRTVFYLPSVISGVALAM 133 Query 123 VWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQG 182 +W +V++ + G+ N +L +GI WL + WA+V++ + S+W ++ LA ++ Sbjct 134 IWAWVYDGEYGIFNYLLSLVGITGPDWLNDTSWALVAMVIASLWGQGSM-VLIFLAGLKS 192 Query 183 VPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGP 242 +PE++YEAA IDGAG +++F IT+P++ + F ++++II AFQ L +LTG GGP Sbjct 193 IPESLYEAASIDGAGAVQKFFRITLPMVSPTILFNLIMTIISAFQQLSLALLLTG--GGP 250 Query 243 ETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHR 290 +TY + + +AF + + GYASA +W MFAI+LVLT L + + + Sbjct 251 LQSTYFYAMYAYDNAFKYFKMGYASANSWFMFAIILVLTFLVFKTSGK 298 >gi|327535626|gb|AEA94460.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length=300 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/291 (39%), Positives = 166/291 (58%), Gaps = 3/291 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 + R + W F+APN +F L P+ SL ++F WD F+ FV + NF + Sbjct 11 NKLRRKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFVGMKNFTKMIH 70 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 D F I++ T +YT+G V T+I SL +A LNRKI+G+ FRT F P S V +A Sbjct 71 DD-TFWISLKQTFIYTIGVVPLTLICSLGLAILLNRKIRGMKFFRTAFFFPYVTSLVAIA 129 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 VVW +F+ G +N L P W WA+ ++ +VSVWR + + ++ LA +Q Sbjct 130 VVWNMLFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYYMILYLAGLQ 189 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 VP +YEA +DGAG+ QF+++T+P +R FV ++ +I+ F+ FDLV V+TG GG Sbjct 190 SVPRELYEATSMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTG--GG 247 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 P AT VL ++ AF FGYASA+A V+F I+L +TV Q + + Sbjct 248 PGRATNVLVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQFKWNQHQE 298 >gi|325662220|ref|ZP_08150835.1| hypothetical protein HMPREF0490_01573 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471472|gb|EGC74693.1| hypothetical protein HMPREF0490_01573 [Lachnospiraceae bacterium 4_1_37FAA] Length=306 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/292 (39%), Positives = 183/292 (63%), Gaps = 5/292 (1%) Query 4 RRGRRAW-AGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTS 62 RR ++ W AG +F+AP +++F +FP + + SF + F ATF + N++ LF Sbjct 14 RREKKDWVAGYVFIAPVTIGLLIFYVFPFIQNFWFSFNDVNKFNMATFCGISNYQRLF-Q 72 Query 63 DPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAV 122 +P ++A+ NT +Y V TV + +SL+VA+ LN KIKG S +RT+ FLP SV +A+ Sbjct 73 EPDLMLAMKNTLLYAVVTVPIGLALSLLVASLLNSKIKGTSFYRTIYFLPSVTMSVAVAL 132 Query 123 VWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQG 182 VW+ +F+ D G+LN +LG GI WL P A+ + +V++W SV + ++LLA MQG Sbjct 133 VWKLIFHGDFGILNTVLGIFGIEGQSWLTNPHTALFCVMIVAIWGSVGYNMIILLAGMQG 192 Query 183 VPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGP 242 + + YEAA IDGAG ++QF IT+PL+ + FV++ +I AFQ FD +Y++ P Sbjct 193 ISRSYYEAAAIDGAGPVKQFFKITIPLLSPTIFFVMITGLIGAFQVFDSIYMMVDPVTNP 252 Query 243 E-TATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSW 293 + ++ +Q+AF + E GYA+A++ MFA+++++TV+QL ++ W Sbjct 253 AFNKVKTMNVLFYQNAFMYGEKGYAAAISIFMFAVIMIITVIQL--VGQKKW 302 >gi|257416547|ref|ZP_05593541.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257158375|gb|EEU88335.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] Length=300 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/291 (39%), Positives = 166/291 (58%), Gaps = 3/291 (1%) Query 2 TRRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFT 61 + R + W F+APN +F L P+ SL ++F WD F+ FV + NF + Sbjct 11 NKLRRKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFVGMKNFTKMIH 70 Query 62 SDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA 121 D F I++ T +YT+G V T+I SL +A LN KI+G+ FRT F P S V +A Sbjct 71 DD-TFWISLKQTFIYTIGVVPLTLICSLGLAILLNHKIRGMKFFRTAFFFPYVTSLVAIA 129 Query 122 VVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181 VVW +F+ G +N L P W WA+ ++ +VSVWR + + ++ LA +Q Sbjct 130 VVWNMLFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYYMILYLAGLQ 189 Query 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 VP +YEAA +DGAG+ QF+++T+P +R FV ++ +I+ F+ FDLV V+TG GG Sbjct 190 SVPRELYEAASMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTG--GG 247 Query 242 PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRS 292 P AT VL ++ AF FGYASA+A V+F I+L +TV Q + + Sbjct 248 PGRATNVLVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQFKWNQHQE 298 >gi|331086014|ref|ZP_08335097.1| hypothetical protein HMPREF0987_01400 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406937|gb|EGG86442.1| hypothetical protein HMPREF0987_01400 [Lachnospiraceae bacterium 9_1_43BFAA] Length=306 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/292 (39%), Positives = 183/292 (63%), Gaps = 5/292 (1%) Query 4 RRGRRAW-AGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHATFVRLDNFRNLFTS 62 RR ++ W AG +F+AP +++F +FP + + SF + F ATF + N++ LF Sbjct 14 RREKKDWVAGYVFIAPVTIGLLIFYVFPFIQNFWFSFNDVNKFNMATFCGISNYQRLF-Q 72 Query 63 DPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAV 122 +P ++A+ NT +Y V TV + +SL+VA+ LN KIKG S +RT+ FLP SV +A+ Sbjct 73 EPDLILAMKNTLLYAVVTVPIGLALSLLVASLLNSKIKGTSFYRTIYFLPSVTMSVAVAL 132 Query 123 VWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQG 182 VW+ +F+ D G+LN +LG GI WL P A+ + +V++W SV + ++LLA MQG Sbjct 133 VWKLIFHGDFGILNTVLGIFGIEGQSWLTNPHTALFCVMIVAIWGSVGYNMIILLAGMQG 192 Query 183 VPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGP 242 + + YEAA IDGAG ++QF IT+PL+ + FV++ +I AFQ FD +Y++ P Sbjct 193 ISRSYYEAAAIDGAGPVKQFFKITIPLLSPTIFFVMITGLIGAFQVFDSIYMMVDPVTNP 252 Query 243 E-TATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLRITHRRSW 293 + ++ +Q+AF + E GYA+A++ MFA+++++TV+QL ++ W Sbjct 253 AFNKVKTMNVLFYQNAFMYGEKGYAAAISIFMFAVIMIITVIQL--VGQKKW 302 Lambda K H 0.332 0.142 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 505145727648 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40