BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2041c Length=439 Score E Sequences producing significant alignments: (Bits) Value gi|15609178|ref|NP_216557.1| sugar-binding lipoprotein [Mycobact... 894 0.0 gi|289447661|ref|ZP_06437405.1| sugar-binding lipoprotein [Mycob... 893 0.0 gi|31793224|ref|NP_855717.1| sugar-binding lipoprotein [Mycobact... 893 0.0 gi|340627052|ref|YP_004745504.1| putative sugar-binding lipoprot... 891 0.0 gi|254822136|ref|ZP_05227137.1| sugar ABC transporter, sugar-bin... 703 0.0 gi|240170480|ref|ZP_04749139.1| sugar-binding lipoprotein [Mycob... 689 0.0 gi|118466482|ref|YP_881668.1| sugar ABC transporter substrate-bi... 681 0.0 gi|254775136|ref|ZP_05216652.1| sugar ABC transporter, sugar-bin... 679 0.0 gi|41407867|ref|NP_960703.1| hypothetical protein MAP1769c [Myco... 678 0.0 gi|15827752|ref|NP_302015.1| lipoprotein ABC transporter [Mycoba... 674 0.0 gi|308232010|ref|ZP_07663968.1| putative bacterial extracellular... 673 0.0 gi|342859735|ref|ZP_08716388.1| sugar ABC transporter substrate-... 672 0.0 gi|296165108|ref|ZP_06847659.1| sugar ABC superfamily ATP bindin... 663 0.0 gi|183983015|ref|YP_001851306.1| sugar-binding lipoprotein [Myco... 659 0.0 gi|333990727|ref|YP_004523341.1| sugar-binding lipoprotein [Myco... 555 7e-156 gi|308232011|ref|ZP_07663969.1| putative Tat (twin-arginine tran... 224 2e-56 gi|148657255|ref|YP_001277460.1| extracellular solute-binding pr... 147 3e-33 gi|239617091|ref|YP_002940413.1| extracellular solute-binding pr... 146 6e-33 gi|339412438|gb|AEJ62003.1| extracellular solute-binding protein... 145 1e-32 gi|312135933|ref|YP_004003271.1| extracellular solute-binding pr... 143 6e-32 gi|320450159|ref|YP_004202255.1| multiple sugar transport system... 141 2e-31 gi|312126730|ref|YP_003991604.1| extracellular solute-binding pr... 140 4e-31 gi|313679303|ref|YP_004057042.1| extracellular solute-binding pr... 138 2e-30 gi|261420113|ref|YP_003253795.1| extracellular solute-binding pr... 135 1e-29 gi|319766925|ref|YP_004132426.1| extracellular solute-binding pr... 135 1e-29 gi|190333364|gb|ACE73677.1| arabino-oligosaccharids-binding prot... 134 3e-29 gi|330468427|ref|YP_004406170.1| extracellular solute-binding pr... 130 4e-28 gi|170761359|ref|YP_001785624.1| sugar ABC transporter, sugar-bi... 130 4e-28 gi|56965534|ref|YP_177267.1| sugar ABC transporter substrate-bin... 128 2e-27 gi|269839523|ref|YP_003324215.1| extracellular solute-binding pr... 127 4e-27 gi|229826403|ref|ZP_04452472.1| hypothetical protein GCWU000182_... 126 7e-27 gi|162451329|ref|YP_001613696.1| sugar ABC transporter substrate... 125 2e-26 gi|239617426|ref|YP_002940748.1| extracellular solute-binding pr... 124 3e-26 gi|256831753|ref|YP_003160480.1| extracellular solute-binding pr... 123 5e-26 gi|15614427|ref|NP_242730.1| hypothetical protein BH1864 [Bacill... 121 3e-25 gi|308068529|ref|YP_003870134.1| sugar ABC transporter periplasm... 120 5e-25 gi|146296569|ref|YP_001180340.1| extracellular solute-binding pr... 119 1e-24 gi|229826396|ref|ZP_04452465.1| hypothetical protein GCWU000182_... 118 2e-24 gi|310641413|ref|YP_003946171.1| sugar ABC transporter periplasm... 118 2e-24 gi|116671929|ref|YP_832862.1| extracellular solute-binding prote... 117 5e-24 gi|186685701|ref|YP_001868897.1| extracellular solute-binding pr... 117 6e-24 gi|257877373|ref|ZP_05657026.1| conserved hypothetical protein [... 116 8e-24 gi|75907452|ref|YP_321748.1| extracellular solute-binding protei... 114 2e-23 gi|17231769|ref|NP_488317.1| sugar ABC transporter sugar binding... 114 3e-23 gi|160934327|ref|ZP_02081714.1| hypothetical protein CLOLEP_0319... 113 5e-23 gi|56962099|ref|YP_173822.1| sugar ABC transporter substrate-bin... 113 6e-23 gi|312127843|ref|YP_003992717.1| extracellular solute-binding pr... 113 7e-23 gi|297199275|ref|ZP_06916672.1| sugar ABC transporter substrate-... 112 1e-22 gi|269839497|ref|YP_003324189.1| extracellular solute-binding pr... 112 1e-22 gi|284029480|ref|YP_003379411.1| extracellular solute-binding pr... 112 1e-22 >gi|15609178|ref|NP_216557.1| sugar-binding lipoprotein [Mycobacterium tuberculosis H37Rv] gi|15841529|ref|NP_336566.1| sugar ABC transporter, sugar-binding protein [Mycobacterium tuberculosis CDC1551] gi|121637927|ref|YP_978150.1| putative sugar-binding lipoprotein [Mycobacterium bovis BCG str. Pasteur 1173P2] 72 more sequence titles Length=439 Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/439 (100%), Positives = 439/439 (100%), Gaps = 0/439 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ Sbjct 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD Sbjct 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW Sbjct 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD Sbjct 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL Sbjct 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 Query 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV Sbjct 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 Query 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR Sbjct 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 Query 421 PATSLTGLSQAVDEVLRNP 439 PATSLTGLSQAVDEVLRNP Sbjct 421 PATSLTGLSQAVDEVLRNP 439 >gi|289447661|ref|ZP_06437405.1| sugar-binding lipoprotein [Mycobacterium tuberculosis CPHL_A] gi|289420619|gb|EFD17820.1| sugar-binding lipoprotein [Mycobacterium tuberculosis CPHL_A] Length=439 Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 439/439 (100%), Gaps = 0/439 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ Sbjct 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RRYPDIKVR+LLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD Sbjct 61 RRYPDIKVRSLLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW Sbjct 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD Sbjct 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL Sbjct 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 Query 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV Sbjct 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 Query 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR Sbjct 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 Query 421 PATSLTGLSQAVDEVLRNP 439 PATSLTGLSQAVDEVLRNP Sbjct 421 PATSLTGLSQAVDEVLRNP 439 >gi|31793224|ref|NP_855717.1| sugar-binding lipoprotein [Mycobacterium bovis AF2122/97] gi|31618816|emb|CAD96920.1| Probable sugar-binding lipoprotein [Mycobacterium bovis AF2122/97] Length=439 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ Sbjct 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD Sbjct 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 Q FAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW Sbjct 121 QVFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD Sbjct 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL Sbjct 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 Query 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV Sbjct 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 Query 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR Sbjct 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 Query 421 PATSLTGLSQAVDEVLRNP 439 PATSLTGLSQAVDEVLRNP Sbjct 421 PATSLTGLSQAVDEVLRNP 439 >gi|340627052|ref|YP_004745504.1| putative sugar-binding lipoprotein [Mycobacterium canettii CIPT 140010059] gi|340005242|emb|CCC44396.1| putative sugar-binding lipoprotein [Mycobacterium canettii CIPT 140010059] Length=439 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ Sbjct 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD Sbjct 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW Sbjct 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD Sbjct 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL Sbjct 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 Query 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRK QAWEFVKFATGPVGQALIGESRLFV Sbjct 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKAQAWEFVKFATGPVGQALIGESRLFV 360 Query 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR Sbjct 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 Query 421 PATSLTGLSQAVDEVLRNP 439 PATSLTGLSQAVDEVLRNP Sbjct 421 PATSLTGLSQAVDEVLRNP 439 >gi|254822136|ref|ZP_05227137.1| sugar ABC transporter, sugar-binding protein [Mycobacterium intracellulare ATCC 13950] Length=441 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/442 (77%), Positives = 389/442 (89%), Gaps = 4/442 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M++KPF RRSLLRGAGAL+A +LAPW+AGCA DDD ALTFFFAANPDE RMR+++EF Sbjct 1 MLDKPFGRRSLLRGAGALSAVALAPWSAGCAPDDD-ALTFFFAANPDEREARMRIIDEFA 59 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVRA+LSGPGVMQQL+TFC GGKCPDVLM WEL+YAELADRGVLLDLN LLARD Sbjct 60 RRHPDIKVRAVLSGPGVMQQLSTFCVGGKCPDVLMTWELSYAELADRGVLLDLNPLLARD 119 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 +AFA +LK+DSI ALYETF FNG Q+A PEQWSGN+LFYNK+LF DAGVP PP +W+RPW Sbjct 120 KAFAQQLKADSIPALYETFAFNGSQFALPEQWSGNYLFYNKRLFADAGVPAPPTTWQRPW 179 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 F+ FLD A+ALTK+ SGR Q+GFVN WVS Y+AGLFAMNNGVPWS PR+NPTHLNFD Sbjct 180 DFSGFLDTARALTKRDTSGRAAQYGFVNTWVSTYSAGLFAMNNGVPWSNPRLNPTHLNFD 239 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 F EAVQFYADL N+H+VAP+A+E QSMST +LF+VG+A IAL GHWRYQT+ RA+ L Sbjct 240 DAAFQEAVQFYADLANEHRVAPNASETQSMSTPNLFAVGRAAIALGGHWRYQTYLRAEDL 299 Query 301 DFDVAPLPIGP---RGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESR 357 DFDVAPLP+GP GRAACSDIG TGL I++TS RK+QAWEFVKFATGPVGQALIGES Sbjct 300 DFDVAPLPVGPALANGRAACSDIGATGLGISSTSPRKEQAWEFVKFATGPVGQALIGESC 359 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 LFVPVLRSA+NS GFANAHRR+GNL+VL+EGPAYS+GLP+TPAWEK+ AL+DR FGPVLR Sbjct 360 LFVPVLRSALNSEGFANAHRRIGNLSVLTEGPAYSQGLPITPAWEKVNALIDRNFGPVLR 419 Query 418 GSRPATSLTGLSQAVDEVLRNP 439 G +PATSL GLS++VDEVLR+P Sbjct 420 GRQPATSLAGLSRSVDEVLRSP 441 >gi|240170480|ref|ZP_04749139.1| sugar-binding lipoprotein [Mycobacterium kansasii ATCC 12478] Length=438 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/439 (76%), Positives = 382/439 (88%), Gaps = 1/439 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M +KPF RR LLRGAGALT ASLAPW +GCA+DDD ALTFFFAANPDE RMR+V EF Sbjct 1 MFDKPFARRRLLRGAGALTVASLAPWPSGCASDDD-ALTFFFAANPDEADARMRIVEEFC 59 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVR LLSGPG +QQ++TFCAGGKCPDVLMAWEL+YA LADRGVLLDLNT+LARD Sbjct 60 RRHPDIKVRTLLSGPGPLQQISTFCAGGKCPDVLMAWELSYAGLADRGVLLDLNTMLARD 119 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 FAAEL SD IG LYETFT+NGGQYAFPEQWSGN+L+YNK+LF +AG+ PPP WE+PW Sbjct 120 PGFAAELSSDGIGPLYETFTYNGGQYAFPEQWSGNYLYYNKRLFAEAGIRPPPTGWEQPW 179 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SFAEFLDAA+ALTK+ +GR QWGFV+ +V +AGLFAMNNGVPWS PRMNP+HLN D Sbjct 180 SFAEFLDAARALTKRDAAGRVSQWGFVDTFVPTISAGLFAMNNGVPWSSPRMNPSHLNLD 239 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 + F+EAVQFYADLTNKHKVAP+A+E QS +T +LFS GKA +AL GHWRYQTFDRADGL Sbjct 240 NAAFIEAVQFYADLTNKHKVAPTASELQSTATPELFSRGKAAMALGGHWRYQTFDRADGL 299 Query 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 DF+V LP+GPRG A CS+IG TGLAIAA+ +R++QAWEFVKFATGPVGQALIGE+ LFV Sbjct 300 DFNVTALPLGPRGHAPCSNIGATGLAIAASCQRREQAWEFVKFATGPVGQALIGETNLFV 359 Query 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 PV+ SAINS GFA AH RV NLAVL+ GP++S+GLP+TPAW K+ ALM+R FGPVLRGSR Sbjct 360 PVVWSAINSAGFAKAHSRVDNLAVLTGGPSHSQGLPITPAWPKVYALMERTFGPVLRGSR 419 Query 421 PATSLTGLSQAVDEVLRNP 439 PATSLTGLS+AVDEVLR+P Sbjct 420 PATSLTGLSRAVDEVLRSP 438 >gi|118466482|ref|YP_881668.1| sugar ABC transporter substrate-binding protein [Mycobacterium avium 104] gi|118167769|gb|ABK68666.1| sugar ABC transporter, sugar-binding protein [Mycobacterium avium 104] Length=442 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/442 (76%), Positives = 393/442 (89%), Gaps = 3/442 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M+++PF RRSLLRGAGAL+AA+LAPW+AGC +DDD ALTFFFAANP+E RMR+++EF Sbjct 1 MLDRPFGRRSLLRGAGALSAAALAPWSAGCGSDDDGALTFFFAANPEERDARMRIIDEFA 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVRA+LSGPGVMQQL+TFC GG+CPDVLMAWEL+YAELADRGVLLDL LLARD Sbjct 61 RRHPDIKVRAVLSGPGVMQQLSTFCVGGRCPDVLMAWELSYAELADRGVLLDLGPLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 +AFA +L++DSI ALYETFTFNG QYA PEQWSGN+LFYNK+LFD+AGVP PP +WERPW Sbjct 121 KAFAQQLQADSIPALYETFTFNGKQYALPEQWSGNYLFYNKRLFDEAGVPSPPTAWERPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 F+EFLD A+ALTK+ SGR Q+GFVN W S+Y+AGLFAMNNGVPWS PR+NPTH NFD Sbjct 181 DFSEFLDTARALTKRDASGRAAQYGFVNTWGSYYSAGLFAMNNGVPWSDPRLNPTHFNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 + F EAVQFYADL NK++VAP+A+E QSMST +LF+VG+A +AL GHWRYQT+ RA+GL Sbjct 241 NAAFQEAVQFYADLANKYRVAPNASETQSMSTPNLFAVGRAAMALGGHWRYQTYLRAEGL 300 Query 301 DFDVAPLPIGP---RGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESR 357 DFDVAPLP+GP +G+ ACSDIG TGLAI+++S RK+QAWEFVKFATGPVGQALIGES Sbjct 301 DFDVAPLPVGPAVGKGQPACSDIGATGLAISSSSPRKEQAWEFVKFATGPVGQALIGESC 360 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 LFVPVLRSA+ S GFA AHRRVGNL VL++GPA+S+GLP+TPAWEK+ ALMDR FGP+LR Sbjct 361 LFVPVLRSALKSDGFARAHRRVGNLGVLTDGPAFSQGLPITPAWEKVNALMDRNFGPILR 420 Query 418 GSRPATSLTGLSQAVDEVLRNP 439 GSRPATSL GLS++VDEVLR+P Sbjct 421 GSRPATSLAGLSRSVDEVLRSP 442 >gi|254775136|ref|ZP_05216652.1| sugar ABC transporter, sugar-binding protein [Mycobacterium avium subsp. avium ATCC 25291] Length=442 Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/442 (76%), Positives = 392/442 (89%), Gaps = 3/442 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M+++PF RRSLLRGAGAL+AA+LAPW+AGC +DDD ALTFFFAANP+E RMR+++EF Sbjct 1 MLDRPFGRRSLLRGAGALSAAALAPWSAGCGSDDDGALTFFFAANPEERDARMRIIDEFA 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVRA+LSGPGVMQQL+TFC GG+CPDVLMAWEL+YAELADRGVLLDL LLARD Sbjct 61 RRHPDIKVRAVLSGPGVMQQLSTFCVGGRCPDVLMAWELSYAELADRGVLLDLGPLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 +AFA +L++DSI ALYETFTFNG QYA PEQWSGN+LFYNK+LFD+AGVP PP +WE PW Sbjct 121 KAFAQQLQADSIPALYETFTFNGKQYALPEQWSGNYLFYNKRLFDEAGVPSPPTAWEHPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 F EFL+AA+ALTK+ SGR Q+GFVN W S+Y+AGLFAMNNGVPWS PR+NPTH NFD Sbjct 181 DFTEFLNAARALTKRDASGRAAQYGFVNTWGSYYSAGLFAMNNGVPWSDPRLNPTHFNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 + F EAVQFYADL NK++VAP+A+E QSMST +LF+VG+A +AL GHWRYQT+ RA+GL Sbjct 241 NAAFQEAVQFYADLANKYRVAPNASETQSMSTPNLFAVGRAAMALGGHWRYQTYIRAEGL 300 Query 301 DFDVAPLPIGP---RGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESR 357 DFDVAPLP+GP +G+ ACSDIG TGLAI+++S RK+QAWEFVKFATGPVGQALIGES Sbjct 301 DFDVAPLPVGPAVGKGQPACSDIGATGLAISSSSPRKEQAWEFVKFATGPVGQALIGESC 360 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 LFVPVLRSA+ S GFA AHRRVGNL VL++GPA+S+GLP+TPAWEK+ ALMDR FGP+LR Sbjct 361 LFVPVLRSALKSDGFARAHRRVGNLGVLTDGPAFSQGLPITPAWEKVNALMDRNFGPILR 420 Query 418 GSRPATSLTGLSQAVDEVLRNP 439 GSRPATSL GLS++VDEVLR+P Sbjct 421 GSRPATSLAGLSRSVDEVLRSP 442 >gi|41407867|ref|NP_960703.1| hypothetical protein MAP1769c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396221|gb|AAS04086.1| hypothetical protein MAP_1769c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457343|gb|EGO36356.1| ABC-type sugar transport system, periplasmic component [Mycobacterium avium subsp. paratuberculosis S397] Length=442 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/442 (75%), Positives = 392/442 (89%), Gaps = 3/442 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M+++PF RRSLLRGAGAL+AA+LAPW+AGC +DDD ALTFFFAANP+E RMR+++EF Sbjct 1 MLDRPFGRRSLLRGAGALSAAALAPWSAGCGSDDDGALTFFFAANPEERDARMRIIDEFA 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVRA+LSGPGVMQQL+TFC GG+CPDVLMAWEL+YAELADRGVLLDL LLARD Sbjct 61 RRHPDIKVRAVLSGPGVMQQLSTFCVGGRCPDVLMAWELSYAELADRGVLLDLGPLLARD 120 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 +AFA +L++DSI ALYETFTFNG QYA PEQWSGN+LFYNK+LFD+AGVP PP +WE PW Sbjct 121 KAFAQQLQADSIPALYETFTFNGKQYALPEQWSGNYLFYNKRLFDEAGVPSPPAAWEHPW 180 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 F+EFL+AA+ALTK+ SGR Q+GFVN W S+Y+AGLFAMNNGVPWS PR+NPTH NFD Sbjct 181 GFSEFLNAARALTKRDASGRAAQYGFVNTWGSYYSAGLFAMNNGVPWSDPRLNPTHFNFD 240 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 + F EAVQFYADL NK++VAP+ +E QSMST +LF+VG+A +AL GHWRYQT+ RA+GL Sbjct 241 NAAFQEAVQFYADLANKYRVAPNGSETQSMSTPNLFAVGRAAMALGGHWRYQTYLRAEGL 300 Query 301 DFDVAPLPIGP---RGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESR 357 DFDVAPLP+GP +G+ ACSDIG TGLAI+++S RK+QAWEFVKFATGPVGQALIGES Sbjct 301 DFDVAPLPVGPAVGKGQPACSDIGATGLAISSSSPRKEQAWEFVKFATGPVGQALIGESC 360 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 LFVPVLRSA+ S GFA AHRRVGNL VL++GPA+S+GLP+TPAWEK+ ALMDR FGP+LR Sbjct 361 LFVPVLRSALKSDGFARAHRRVGNLGVLTDGPAFSQGLPITPAWEKVNALMDRNFGPILR 420 Query 418 GSRPATSLTGLSQAVDEVLRNP 439 GSRPATSL GLS++VDEVLR+P Sbjct 421 GSRPATSLAGLSRSVDEVLRSP 442 >gi|15827752|ref|NP_302015.1| lipoprotein ABC transporter [Mycobacterium leprae TN] gi|221230229|ref|YP_002503645.1| putative ABC-transport lipoprotein [Mycobacterium leprae Br4923] gi|2337833|emb|CAB11325.1| hypothetical protein MLCB2052.27 [Mycobacterium leprae] gi|13093304|emb|CAC30378.1| possible ABC-transport lipoprotein [Mycobacterium leprae] gi|219933336|emb|CAR71522.1| possible ABC-transport lipoprotein [Mycobacterium leprae Br4923] Length=445 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/446 (78%), Positives = 381/446 (86%), Gaps = 8/446 (1%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M K F RRSLLRGAGALTAA+LAP A GC++DDD ALTFFFAANP+E RMR+V EFQ Sbjct 1 MHGKLFGRRSLLRGAGALTAAALAPGAVGCSSDDD-ALTFFFAANPEETNARMRIVGEFQ 59 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 R +PDIKVRA+LSGPGVMQQL+TFCAGGKCPDVLMAW+LTYAELADRGVLLDLNTLL +D Sbjct 60 RDHPDIKVRAVLSGPGVMQQLSTFCAGGKCPDVLMAWDLTYAELADRGVLLDLNTLLGQD 119 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 +AFAAELKSDSI LYETFTFNGGQYAFPEQWSGN+LFYNKQLF +AGV PPP +WE+PW Sbjct 120 KAFAAELKSDSIEPLYETFTFNGGQYAFPEQWSGNYLFYNKQLFTNAGVQPPPCTWEQPW 179 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SF EFLD A+ALTK+ SGR QWGFVN W+S+Y AGLFA+NNGVPWS PRMNPTHLNFD Sbjct 180 SFTEFLDTARALTKRDSSGRVTQWGFVNTWLSYYTAGLFALNNGVPWSNPRMNPTHLNFD 239 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 D F+EAVQFY DLTNK++VAP A+EQQ M+TADLFS+GKA IAL GHWRYQTF RA+GL Sbjct 240 DDAFIEAVQFYCDLTNKYQVAPDASEQQWMATADLFSLGKAAIALGGHWRYQTFMRAEGL 299 Query 301 DFDVAPLPIGPRG-------RAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALI 353 DFDV LPIGP ACSDIG TGLAIAA+S RK+QAWEFVKFATGP GQALI Sbjct 300 DFDVTSLPIGPSAGTVPATRSGACSDIGATGLAIAASSSRKEQAWEFVKFATGPAGQALI 359 Query 354 GESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFG 413 GES LFVPVL+SAI S GFA AH RV NLAVL+ GP +S GLP+TPAWEKI ALMDR FG Sbjct 360 GESCLFVPVLQSAIYSTGFAKAHNRVANLAVLTGGPVHSAGLPITPAWEKINALMDRNFG 419 Query 414 PVLRGSRPATSLTGLSQAVDEVLRNP 439 PVLRG RPATSL GL++AVDEVL +P Sbjct 420 PVLRGVRPATSLAGLARAVDEVLNSP 445 >gi|308232010|ref|ZP_07663968.1| putative bacterial extracellular solute-binding protein [Mycobacterium tuberculosis SUMu001] gi|308215305|gb|EFO74704.1| putative bacterial extracellular solute-binding protein [Mycobacterium tuberculosis SUMu001] Length=330 Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/330 (99%), Positives = 330/330 (100%), Gaps = 0/330 (0%) Query 110 LLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGV 169 +LDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGV Sbjct 1 MLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGV 60 Query 170 PPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSV 229 PPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSV Sbjct 61 PPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSV 120 Query 230 PRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHW 289 PRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHW Sbjct 121 PRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHW 180 Query 290 RYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVG 349 RYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVG Sbjct 181 RYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVG 240 Query 350 QALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMD 409 QALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMD Sbjct 241 QALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMD 300 Query 410 RYFGPVLRGSRPATSLTGLSQAVDEVLRNP 439 RYFGPVLRGSRPATSLTGLSQAVDEVLRNP Sbjct 301 RYFGPVLRGSRPATSLTGLSQAVDEVLRNP 330 >gi|342859735|ref|ZP_08716388.1| sugar ABC transporter substrate-binding protein [Mycobacterium colombiense CECT 3035] gi|342132867|gb|EGT86087.1| sugar ABC transporter substrate-binding protein [Mycobacterium colombiense CECT 3035] Length=441 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/442 (76%), Positives = 391/442 (89%), Gaps = 4/442 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M++KPF RR LLRGAGAL+AA+LAPW AGCA+DDD ALTFFFAANPDE RMR+V+EF Sbjct 1 MLDKPFGRRDLLRGAGALSAAALAPWPAGCASDDD-ALTFFFAANPDERDARMRIVDEFV 59 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVR + SGPGVMQQL+TFC GGKCPDVLMAWEL+YAELADRGVLLD+NTLLARD Sbjct 60 RRHPDIKVRPVQSGPGVMQQLSTFCVGGKCPDVLMAWELSYAELADRGVLLDMNTLLARD 119 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 +AFA +LK+DSI ALYETFTFN QYA PEQWSGN+LFYNK+LF +AGVP PP +WE+PW Sbjct 120 KAFADQLKADSIPALYETFTFNDKQYALPEQWSGNYLFYNKRLFAEAGVPAPPKTWEQPW 179 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 FAEFLDAA+ALTK+ SGR Q+GFVN W S+Y+AGLFAMNNGV WS PR+NPTH NFD Sbjct 180 DFAEFLDAARALTKRDASGRAAQYGFVNTWGSYYSAGLFAMNNGVAWSNPRLNPTHFNFD 239 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 + F EAVQFYADL N+++VAP+A+E QSMST +LF+VG+A IAL GHWRYQT+ RA+ L Sbjct 240 NAAFQEAVQFYADLANEYRVAPNASETQSMSTPNLFAVGRAAIALGGHWRYQTYIRAEDL 299 Query 301 DFDVAPLPIGP---RGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESR 357 DFDVAPLP+GP +G AACSDIG TGLAI+A+S RK+QAWEFVKFATGP+GQALIGES Sbjct 300 DFDVAPLPVGPALGKGHAACSDIGATGLAISASSPRKEQAWEFVKFATGPIGQALIGESC 359 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 LFVPVLRSA+ S GFANAHRR+GNL+VL++GPA+S+GLP+TPAWEK+ ALMDR FGPVLR Sbjct 360 LFVPVLRSALRSDGFANAHRRLGNLSVLTDGPAFSQGLPITPAWEKVNALMDRNFGPVLR 419 Query 418 GSRPATSLTGLSQAVDEVLRNP 439 G +PATSL+GLS++VDEVLR+P Sbjct 420 GRQPATSLSGLSRSVDEVLRSP 441 >gi|296165108|ref|ZP_06847659.1| sugar ABC superfamily ATP binding cassette transporter, sugar-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899520|gb|EFG78975.1| sugar ABC superfamily ATP binding cassette transporter, sugar-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=440 Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/441 (77%), Positives = 384/441 (88%), Gaps = 3/441 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M++KPF RR LLRGAGAL AASLAPW AGCA D+D ALTFFFAANPDE R+R+V+EF Sbjct 1 MLDKPFGRRGLLRGAGALAAASLAPWTAGCAPDED-ALTFFFAANPDERDARIRIVDEFT 59 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 RR+PDIKVR +L+ PGVMQQL+TFCAGG+CPDVLMAW+LTYAELA RGVLLDLNT+L+ D Sbjct 60 RRHPDIKVRPVLAAPGVMQQLSTFCAGGRCPDVLMAWDLTYAELAARGVLLDLNTMLSGD 119 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 AFAA LKSD IGALY++FTFNGGQYA PEQWSGNFLFYNK+LF +AG+P PP +WE+PW Sbjct 120 PAFAAGLKSDGIGALYDSFTFNGGQYALPEQWSGNFLFYNKRLFAEAGLPAPPRTWEQPW 179 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 +F EF AA ALTK+ RSGR QWGFVN W S+Y+AGLFAMNNGVPWS P NPTH NFD Sbjct 180 TFTEFSSAAAALTKRHRSGRATQWGFVNMWFSYYSAGLFAMNNGVPWSTPLKNPTHFNFD 239 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 +D F+EAVQFYADL NKHKVAP+A+E QSMST DLF+ GKA +A+ GHWRYQTF RADGL Sbjct 240 NDAFIEAVQFYADLANKHKVAPNASEVQSMSTPDLFAGGKAAMAMGGHWRYQTFIRADGL 299 Query 301 DFDVAPLPIGPR--GRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRL 358 DFDV LP+GPR G+ A SDIG TGLAI+A S+RK+QAWEFVKFATGPVGQALIGES L Sbjct 300 DFDVTALPVGPRRQGQPAHSDIGSTGLAISAGSQRKEQAWEFVKFATGPVGQALIGESSL 359 Query 359 FVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRG 418 FVPVL+SA+NS GFA+AHR +GNLAVL++GPAYSEGLPVTPAWEKI ALMDR FGPVLRG Sbjct 360 FVPVLQSALNSAGFADAHRNLGNLAVLTQGPAYSEGLPVTPAWEKIVALMDRSFGPVLRG 419 Query 419 SRPATSLTGLSQAVDEVLRNP 439 SRPATSL GLS A+DEVLR+P Sbjct 420 SRPATSLAGLSPAIDEVLRSP 440 >gi|183983015|ref|YP_001851306.1| sugar-binding lipoprotein [Mycobacterium marinum M] gi|183176341|gb|ACC41451.1| sugar-binding lipoprotein [Mycobacterium marinum M] Length=438 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/439 (76%), Positives = 381/439 (87%), Gaps = 1/439 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 M +KP RR LLRGAG LTAA+LAP AAGCA+DDD ALTFFFAANP+E R+RVV+ F Sbjct 1 MFDKPLRRRELLRGAGLLTAAALAPVAAGCASDDD-ALTFFFAANPEEADARIRVVDAFG 59 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD 120 R +PDIKVR LLSGPG +QQ++TFCAGGKCPDVLMAWEL+YAELADRGV LDLNT+LARD Sbjct 60 RSHPDIKVRTLLSGPGALQQISTFCAGGKCPDVLMAWELSYAELADRGVFLDLNTMLARD 119 Query 121 QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW 180 Q FA EL +DSIGALY+TF +NGGQYAFPEQWSGNFLFYN+ LF D GVPPPP SW++PW Sbjct 120 QKFADELAADSIGALYDTFAYNGGQYAFPEQWSGNFLFYNRGLFADGGVPPPPTSWDQPW 179 Query 181 SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD 240 SFAEFLD A+ALTK+ +GR QWGFV+ +V +AGLFA+NNGVPWS PRMNPTHLNFD Sbjct 180 SFAEFLDTARALTKRDGAGRVTQWGFVDTFVPPLSAGLFALNNGVPWSTPRMNPTHLNFD 239 Query 241 HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL 300 D F+EAVQFYADL+ KH+VAP+A+E QS++T DLFS+GKA +AL GHWRYQTFDRADGL Sbjct 240 DDAFIEAVQFYADLSAKHQVAPTASELQSIATTDLFSLGKAAMALGGHWRYQTFDRADGL 299 Query 301 DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV 360 +FDV LP+GP GRAACS+IG TGLAIAA+S RK+QAWEFVKFATGP GQALIGE+ LFV Sbjct 300 EFDVTALPLGPNGRAACSNIGATGLAIAASSARKEQAWEFVKFATGPAGQALIGETDLFV 359 Query 361 PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR 420 PVL SA+NS GFA AHRRV NLAVL+ GP +S+GLP+TPAW K+ ALMDR FGPVLRGSR Sbjct 360 PVLGSALNSAGFAKAHRRVDNLAVLTAGPGHSQGLPITPAWPKVHALMDRNFGPVLRGSR 419 Query 421 PATSLTGLSQAVDEVLRNP 439 PATSL G+S+A+DEVLR+P Sbjct 420 PATSLIGMSRALDEVLRSP 438 >gi|333990727|ref|YP_004523341.1| sugar-binding lipoprotein [Mycobacterium sp. JDM601] gi|333486695|gb|AEF36087.1| sugar-binding lipoprotein [Mycobacterium sp. JDM601] Length=432 Score = 555 bits (1429), Expect = 7e-156, Method: Compositional matrix adjust. Identities = 281/431 (66%), Positives = 332/431 (78%), Gaps = 6/431 (1%) Query 11 LLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRA 70 +LRGA AL A+ APW + C ADDD AL FFFAANP+E RMR+V+ FQ R+PDI+VR Sbjct 1 MLRGAAALGLAAAAPWPSACGADDD-ALRFFFAANPEEADARMRIVDAFQHRHPDIRVRT 59 Query 71 LLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSD 130 +L+G QQ++TFCAGG+CPDVLMAWE YAELA RGVL DLN LL D+ FAA L++D Sbjct 60 VLAGGDPTQQISTFCAGGRCPDVLMAWEFNYAELAGRGVLADLNALLDADREFAAALRAD 119 Query 131 SIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQ 190 SI ALYETF FNGGQYAFPEQWSG FLFYN +F +AGVPPPPG W+ PWSF EFLD A Sbjct 120 SIPALYETFGFNGGQYAFPEQWSGAFLFYNTAIFAEAGVPPPPGRWDEPWSFGEFLDTAT 179 Query 191 ALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEAVQF 250 ALT++ +GR +WGFV+ W Y+A LF MNNG PW+VPR NPTHLN+D D FL +QF Sbjct 180 ALTRRDTNGRIIRWGFVDTWSPPYSAALFGMNNGTPWAVPRFNPTHLNYDDDAFLAGIQF 239 Query 251 YADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIG 310 YADL N H+VAP+A++ Q+MST LF+ GKA +AL GHWRYQTF +A+ LDFDVA LP G Sbjct 240 YADLANVHRVAPAASDTQAMSTMGLFTAGKAAMALGGHWRYQTFAQAEDLDFDVAVLPTG 299 Query 311 PRGRAAC----SDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSA 366 P A S IG TGLAIAA SR + QAWEFVKFA GPVGQ+LIGES LFVPVLRSA Sbjct 300 PAAAAKGLAARSAIGSTGLAIAAASRHRRQAWEFVKFAAGPVGQSLIGESGLFVPVLRSA 359 Query 367 INSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSRPATSL- 425 I + GF AHR + NLAVL+ GPA+SEGLP++P W+++ ALMDR GPVLRG RPA +L Sbjct 360 IAAPGFTAAHRGITNLAVLTGGPAHSEGLPISPDWQRVHALMDRAIGPVLRGKRPAATLK 419 Query 426 TGLSQAVDEVL 436 TGLS +DE+L Sbjct 420 TGLSPQIDELL 430 >gi|308232011|ref|ZP_07663969.1| putative Tat (twin-arginine translocation) pathway signal sequence [Mycobacterium tuberculosis SUMu001] gi|308215306|gb|EFO74705.1| putative Tat (twin-arginine translocation) pathway signal sequence [Mycobacterium tuberculosis SUMu001] Length=112 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/111 (99%), Positives = 109/111 (99%), Gaps = 0/111 (0%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ Sbjct 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ 60 Query 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLL 111 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRG L Sbjct 61 RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGCCL 111 >gi|148657255|ref|YP_001277460.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148569365|gb|ABQ91510.1| extracellular solute-binding protein, family 1 [Roseiflexus sp. RS-1] Length=427 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 112/375 (30%), Positives = 170/375 (46%), Gaps = 16/375 (4%) Query 38 LTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG---VMQQLATFCAGGKCPDVL 94 +TF + + E R+V F+ R+P I+V L+ PG ++L A G D++ Sbjct 31 ITFMVSGDAAEKAAYERLVAAFRERHPTIQV-TLIHIPGQSDYRKRLGIDFAAGTPADIV 89 Query 95 MAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSG 154 + YA A RGVL L LA+ +A+ D F + G P+ S Sbjct 90 LINYRRYAAFAARGVLEPLGPYLAQSAVISAD---DFYAEAMTPFIWQGVIMCLPQNLSS 146 Query 155 NFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGR-SGRDRQWGFVNAWVSF 213 ++YN+ LF AG+P P W ++ + L+AAQ LT+ G Q+G + VS Sbjct 147 LVVYYNRDLFRAAGLPDPSPDW----TWNDMLEAAQRLTRDANGDGVVDQYG-LGTEVSL 201 Query 214 YAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTA 273 + F NG PT L D EA+Q++ DL KH V P A + + S+ Sbjct 202 FRLAPFIWQNGGDVVDDPQTPTRLTLDTPAAREAIQWFVDLQVKHHVTPDAVAEAAESSE 261 Query 274 DLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRR 333 F G+ G+ L T+ D+DVAPLP RG+ + +A S++ Sbjct 262 SRFLNGRLGMFLNSRRGVPTYRTITDFDWDVAPLP---RGKQRAGILHADAYCMAQVSKQ 318 Query 334 KDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSE 393 K+ AW F++FA GQ +I + VP LR+ +S F + H R N V +G A+ Sbjct 319 KEAAWTFIEFANSVEGQRIIAATGRTVPSLRAVASSPVFLDPHTRPANSRVFLDGIAFIR 378 Query 394 GLPVTPAWEKIAALM 408 +PV W I ++ Sbjct 379 AVPVMETWVDIEDIV 393 >gi|239617091|ref|YP_002940413.1| extracellular solute-binding protein family 1 [Kosmotoga olearia TBF 19.5.1] gi|239505922|gb|ACR79409.1| extracellular solute-binding protein family 1 [Kosmotoga olearia TBF 19.5.1] Length=416 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 114/398 (29%), Positives = 177/398 (45%), Gaps = 17/398 (4%) Query 45 NPDELRPRMRVVNEFQRRYPDIKVRALLSGPGVM-QQLATFCAGGKCPDVLMAWELTYAE 103 +PDE +++ F+ P IKV+ + G QQL T G PDV Sbjct 31 SPDEEAVYKKIIAAFEEANPGIKVQVSVQPWGAYWQQLQTKIVAGSAPDVFAVNGGWLQV 90 Query 104 LADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQL 163 A +GVL D+ L+ D A ++S+ TF + G Y P ++ +FYNK + Sbjct 91 FASKGVLFDITDLIYGDPASKNLIESELFPEAVNTFKYQGKLYGLPRDFNTYVVFYNKTM 150 Query 164 FDDAGVPPPPGSWERPWSFAEFLDAAQALTKQ-GRSGRDRQWGFVNAWVSFYAAGLFAMN 222 FD+AGVP P W++ +FLD A+ LTK GR QWG + Y N Sbjct 151 FDEAGVPYP----ALDWTWEDFLDIAKKLTKDVDGDGRIDQWGVIIPINPDYWMPFIWQN 206 Query 223 NGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAG 282 G + + T FD +E QF ADL K+ V+P+ ++Q + + F GK G Sbjct 207 GG---EILNADKTKSLFDSPQNVETFQFLADLILKYHVSPTISQQAAFG-WNPFGSGKIG 262 Query 283 IALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVK 342 + + G W T+ D+DV L PRG+ + G ++ ++ +A E +K Sbjct 263 MYITGKWMVPTYSTIQNFDWDVQVL---PRGKKMAAIANAVGFSVFKKTKHPKEAVELLK 319 Query 343 FATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGN-LAVLSEGPAYSEGLPVTPAW 401 F GQ + E VP +SA S F + ++ N A L E P YS LP P W Sbjct 320 FIATE-GQKYLLELGSSVPTSKSAAFSSEFMDPTKKPDNKFAFLIEIP-YSHILPFHPKW 377 Query 402 EKIAALMDRYFGPVLRGS-RPATSLTGLSQAVDEVLRN 438 ++ + +Y + G P + + ++++L + Sbjct 378 NELWDVWSKYPELIFSGKLSPEYGVKKMHMEMEKILNS 415 >gi|339412438|gb|AEJ62003.1| extracellular solute-binding protein family 1 [Spirochaeta thermophila DSM 6578] Length=437 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 119/396 (31%), Positives = 193/396 (49%), Gaps = 29/396 (7%) Query 55 VVNEFQRRYPDIKVRA--LLSGPGVMQQLATFCAGGKCPDVLM-AWELTYAELADRGVLL 111 V+ EFQ+ YP I V + SG +L T AGG PDV A + YA A +G + Sbjct 54 VIEEFQQLYPHITVELENIGSGTEYYAKLQTMVAGGLAPDVFYPATHVAYA-YAIKGAIR 112 Query 112 DLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPP 171 L+ + RD+ + + + NG Y P + +FYNK LFD AGVP Sbjct 113 MLDDFIKRDKIDLSAYNPQ----ILNLYKLNGKVYGLPIDTAALVVFYNKDLFDQAGVPY 168 Query 172 PPGSWERPWSFAEFLDAAQALTKQ-GRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVP 230 P ++ W++ +FL+ A+ LTK G+ Q+G V+ + +++ +++ + Sbjct 169 P----KKGWTWDDFLETAKKLTKDFDGDGQPDQFG-VDQFRNYWPLLVWSHTGHGLFDDI 223 Query 231 RMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWR 290 R T + +E++Q+ ADL H V P+ ++Q +DLF+ GKA + + GHWR Sbjct 224 RKPTTFIAGSDPKVVESIQWIADLMLVHNVMPT--DEQRADISDLFAAGKAAMQIVGHWR 281 Query 291 YQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKF--ATGPV 348 T+ +A G++FD APLPIG G++ G + +++ S+ ++AWEFVKF A G Sbjct 282 VNTYLKA-GINFDCAPLPIGDSGKSVNRADG-SCFVVSSQSKHPEEAWEFVKFLAAPGAR 339 Query 349 GQALIGESRLFVPVLRSAINSHGFANAHRRVG-NLAVLSEG----PAYSEGLPVTPAWEK 403 G +++ ++ P L F + G N A EG P Y P+ P + Sbjct 340 GVSMLLGLQIMTPALIEFQKDPRFLTPEQLPGVNKAAFLEGEYLFPMYD---PIHPMYAA 396 Query 404 IAALMDRYFGPVLRGSRPAT-SLTGLSQAVDEVLRN 438 A + G V G A ++ L + V+++L+N Sbjct 397 FDAAWKQELGLVWLGQATAKEAMERLKKQVEDMLKN 432 >gi|312135933|ref|YP_004003271.1| extracellular solute-binding protein family 1 [Caldicellulosiruptor owensensis OL] gi|311775984|gb|ADQ05471.1| extracellular solute-binding protein family 1 [Caldicellulosiruptor owensensis OL] Length=420 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 104/367 (29%), Positives = 158/367 (44%), Gaps = 64/367 (17%) Query 37 ALTFFFAANPDE-----------------LRPRMRVVNEFQRRYPDIKVRALLSGPGVMQ 79 ALT F A P E + + + F+R+YP+IKV + + + Sbjct 17 ALTLFVAFRPSEAISSSKKVTISTSMWGDINAKYDFIAAFERKYPNIKVNVIKAPENYSE 76 Query 80 QLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETF 139 +L A K PDV + WE A GV++ L+ + + + F + D I A + Sbjct 77 KLQAMIAANKAPDVPLVWECDIGRFAKNGVIIPLDPYIKKTKEFTMD---DFIPAFAKLT 133 Query 140 TFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSG 199 G Y P ++ ++YNK LFD A VP P WS+ + L+AA+ LT + G Sbjct 134 KMQGAVYGLPWCFATEIMYYNKTLFDKAKVPYPTDK----WSWEDVLNAAKKLTIV-KGG 188 Query 200 RDRQWG-----FVNAWVSFYAA---------GLFAMNNGVPWSVPRMNPTHLNFDHDGFL 245 + QWG FV W + A G A+ GV Sbjct 189 KTIQWGIDYPRFVGIWYALIGAAGDDVADEKGNVALGKGVK------------------- 229 Query 246 EAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVA 305 AVQ+ DL NK+KV P A SM DLF+ GKA + G W T+ +D+A Sbjct 230 TAVQWVYDLVNKYKVMP--APSTSMGVTDLFASGKAAMTFTGSWMISTYRDIKDFKWDIA 287 Query 306 PLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRS 365 PLP R S++ I+ TS+ K+++W+F++F GQ ++ + P R Sbjct 288 PLPKKVR---QYSNLHTGFYTISKTSKHKEESWKFIEFMLSEEGQKILSQG-YNNPSARK 343 Query 366 AINSHGF 372 +I + G+ Sbjct 344 SIMAKGY 350 >gi|320450159|ref|YP_004202255.1| multiple sugar transport system substrate-binding protein [Thermus scotoductus SA-01] gi|320150328|gb|ADW21706.1| multiple sugar transport system substrate-binding protein [Thermus scotoductus SA-01] Length=424 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/322 (32%), Positives = 146/322 (46%), Gaps = 27/322 (8%) Query 47 DELRPRMRVVNEFQRRYPDIKVRALLSGPG-VMQQLATFCAGGKCPDVLMAWELTYAELA 105 +E++ V+ FQ R P I+V + G + ++ A G PDV + + +A Sbjct 30 EEIKAYQEVLKVFQERNPGIQVEYINIPSGEYLAKITAMMAAGTPPDVFFLNNIDFPGMA 89 Query 106 DRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFD 165 RGVL L+ + RD+ A D + + F + G QY P S +FYN+ L Sbjct 90 SRGVLAPLDAFIQRDKYPTA----DIFPGILKAFQWEGKQYGLPRDVSNLVVFYNRTLLR 145 Query 166 DAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGV 225 AG+P P W ++ +FL A+ALT + + G+ QWG VSF LF Sbjct 146 KAGLPDPKPDW----TWEDFLRYAKALTVE-KDGKRVQWG-----VSFQTFYLFWE---- 191 Query 226 PWSVPR----MNPTHLNF--DHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVG 279 PW P H F + LE +QFY DL KH VAP+ E Q +F G Sbjct 192 PWVWSAGGRFYAPDHSRFLLNSPASLEGLQFYLDLRYKHHVAPTPEEAQDRGAFTMFLNG 251 Query 280 KAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWE 339 + G+ + G WR T DFDV P P G G + DI +G +AA SR + AW+ Sbjct 252 QTGMIVDGRWRVPTLKARAKFDFDVVPFPRGKAG--SIVDIDGSGWVMAAGSRNPEAAWK 309 Query 340 FVKFATGPVGQALIGESRLFVP 361 + F GP + + L +P Sbjct 310 LLSFLAGPEASRIFTRTGLIIP 331 >gi|312126730|ref|YP_003991604.1| extracellular solute-binding protein family 1 [Caldicellulosiruptor hydrothermalis 108] gi|311776749|gb|ADQ06235.1| extracellular solute-binding protein family 1 [Caldicellulosiruptor hydrothermalis 108] Length=420 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 103/367 (29%), Positives = 160/367 (44%), Gaps = 64/367 (17%) Query 37 ALTFFFAANPDE-----------------LRPRMRVVNEFQRRYPDIKVRALLSGPGVMQ 79 ALT F A P E + + + F+++YP+IKV + + + Sbjct 17 ALTLFVAFRPSEAISSSKKVTISTSMWGDINAKYDFIAAFEKKYPNIKVNVIKAPENYSE 76 Query 80 QLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETF 139 +L A K PDV + WE A GV++ L+ + + +AF +D I A + Sbjct 77 KLQAMIAANKAPDVPLVWECDIGRFAKNGVIIPLDPYIKKTKAFTM---NDFIPAFAKLT 133 Query 140 TFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSG 199 G Y P ++ ++YNK LFD A VP P W++ + L+AA+ LT + G Sbjct 134 KMQGAVYGLPWCFATEIMYYNKTLFDKAKVPYPTDK----WTWDDVLNAAKKLTIV-KGG 188 Query 200 RDRQWG-----FVNAWVSFYAA---------GLFAMNNGVPWSVPRMNPTHLNFDHDGFL 245 + QWG FV W + A G A+ GV Sbjct 189 KTIQWGIDYPRFVGIWYALIGAAGDDVADEKGNVALGKGVK------------------- 229 Query 246 EAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVA 305 AVQ+ DL NK+KV P A SM DLF+ GKA +A G W T+ +D+A Sbjct 230 IAVQWVYDLVNKYKVMP--APSTSMGVTDLFASGKAAMAFTGSWMISTYRDIKDFKWDIA 287 Query 306 PLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRS 365 PLP R S++ I+ TS+ K+++W+F++F GQ ++ + P R Sbjct 288 PLPKKVR---QYSNLHTGFYTISKTSKYKEESWKFIEFMLSEEGQKILSQG-YNNPSARK 343 Query 366 AINSHGF 372 ++ + G+ Sbjct 344 SLMAKGY 350 >gi|313679303|ref|YP_004057042.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] gi|313152018|gb|ADR35869.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] Length=431 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 119/405 (30%), Positives = 175/405 (44%), Gaps = 37/405 (9%) Query 48 ELRPRMRVVNEFQRRYPDIKVRAL-LSGPGVMQQLATFCAGGKCPDVLMAWELTYAELAD 106 E+ + +F+ +P+IKV L + +L A GK PD+ + + LA Sbjct 37 EIALYKELFKKFEAEHPNIKVELLHIPSRDYWTKLTAMFAAGKAPDLFFTNNINFPALAA 96 Query 107 RGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDD 166 +GV L + +D + + F F G YA P S ++YN+ L + Sbjct 97 KGVARPLEPFIKKDNYDTGIFYK----GILDAFRFEGKLYALPRDISNMVVYYNRDLLRE 152 Query 167 AGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLF----AMN 222 AG+P P W +FL A+ALTK+ G+ QWG VSFY LF + Sbjct 153 AGLPDPDPDWTW----DDFLRYAKALTKE-EGGKRTQWG-----VSFYTYFLFWEPWVWS 202 Query 223 NGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAG 282 NG W P + LN +E +QFY DL KH VAP+ AE S LF GK G Sbjct 203 NGGRWYSPDHSKFLLN--SPASVEGLQFYVDLRWKHHVAPTPAEAADRSAYSLFLGGKTG 260 Query 283 IALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVK 342 + + G WR + + D+D+ P P G G + DI +G AI+ SR D AWE +K Sbjct 261 MIVDGRWRVPSLKKKAKFDWDIVPFPRGKAG--SIVDIDGSGWAISRQSRNPDAAWEVLK 318 Query 343 FATGPVGQALIGESRLFVPVLRSAINSHGFANA----------HRRVGNLAVLSEGPAYS 392 F GP G + L +P + N+ NA R +++ + Sbjct 319 FLAGPEGSLAFTKGGLIIPAIGFDPNNPQATNAILKAFFQPPPPRHQQYFLTVNKDAVPT 378 Query 393 EGLPVTPAWEKIAALMDRYFGPVLRGSRPA-TSLTGLSQAVDEVL 436 E W + L+ + GPV G T+L ++ AV ++L Sbjct 379 ETF---ERWSEALNLISKALGPVWEGKEDVQTALDKVAPAVQKIL 420 >gi|261420113|ref|YP_003253795.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC61] gi|261376570|gb|ACX79313.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC61] Length=454 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/355 (29%), Positives = 166/355 (47%), Gaps = 21/355 (5%) Query 17 ALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG 76 AL S + G + LTF F P E VV +F+ ++P++KV +++ P Sbjct 21 ALVGCSDKNASVGNGNGEKIELTFMFRGQPQEQTAYKNVVKKFEEKHPNVKVNIVVTSPD 80 Query 77 -VMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGAL 135 +L AG K PDV + VLLD+ + + + D Sbjct 81 QYATKLRAAIAGRKIPDVFYFNPGELRAYVNSNVLLDITKYVENSKGVNLQ---DIWEKG 137 Query 136 YETFTFNG---GQ---YAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAA 189 + F+G GQ Y P+ L YNK +F+ AG+P P ++P+++ EF+D Sbjct 138 VNKYRFDGEKVGQGNLYGLPKDLGPFALGYNKTMFEKAGIPLPDK--DKPYTWQEFIDVC 195 Query 190 QALTKQGR-SGRDRQWGF-VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEA 247 + LTK G+ QWG +NA + A F +NG W + T + D F+EA Sbjct 196 KKLTKDTNGDGKLDQWGTGLNATWTLQA---FVWSNGADWI--DESKTKVTVDDPKFIEA 250 Query 248 VQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPL 307 +QF+AD+ NK+KV PS AE Q++ T + G+ G G W FD+ ++D+ P Sbjct 251 LQFFADMQNKYKVTPSIAEAQTLDTYQRWLRGQLGFFPVGPWDLAAFDQQIKFEYDLIPW 310 Query 308 PIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATG-PVGQALIGESRLFVP 361 P G G+ A +G G+ +++ ++ +A E + + P GQ + + R+ +P Sbjct 311 PAGSTGKPATW-VGSLGIGVSSMTKHPKEAVELALYLSADPEGQKALVDQRVQLP 364 >gi|319766925|ref|YP_004132426.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC52] gi|317111791|gb|ADU94283.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC52] Length=453 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/355 (29%), Positives = 166/355 (47%), Gaps = 21/355 (5%) Query 17 ALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG 76 AL S + G + LTF F P E VV +F+ ++P++KV +++ P Sbjct 20 ALVGCSDKNASVGNGNGEKIELTFMFRGQPQEQTAYKNVVKKFEEKHPNVKVNIVVTSPD 79 Query 77 -VMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGAL 135 +L AG K PDV + VLLD+ + + + D Sbjct 80 QYATKLRAAIAGRKIPDVFYFNPGELRAYVNSNVLLDITKYVENSKGVNLQ---DIWEKG 136 Query 136 YETFTFNG---GQ---YAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAA 189 + F+G GQ Y P+ L YNK +F+ AG+P P ++P+++ EF+D Sbjct 137 VNKYRFDGEKVGQGNLYGLPKDLGPFALGYNKTMFEKAGIPLPDK--DKPYTWQEFIDVC 194 Query 190 QALTKQGR-SGRDRQWGF-VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEA 247 + LTK G+ QWG +NA + A F +NG W + T + D F+EA Sbjct 195 KKLTKDTNGDGKLDQWGTGLNATWTLQA---FVWSNGADWI--DESKTKVTVDDPKFIEA 249 Query 248 VQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPL 307 +QF+AD+ NK+KV PS AE Q++ T + G+ G G W FD+ ++D+ P Sbjct 250 LQFFADMQNKYKVTPSIAEAQTLDTYQRWLRGQLGFFPVGPWDLAAFDQQIKFEYDLIPW 309 Query 308 PIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATG-PVGQALIGESRLFVP 361 P G G+ A +G G+ +++ ++ +A E + + P GQ + + R+ +P Sbjct 310 PAGSTGKPATW-VGSLGIGVSSMTKHPKEAVELALYLSADPEGQKALVDQRVQLP 363 >gi|190333364|gb|ACE73677.1| arabino-oligosaccharids-binding protein [Geobacillus stearothermophilus] Length=454 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 101/355 (29%), Positives = 165/355 (47%), Gaps = 21/355 (5%) Query 17 ALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG 76 AL S + G + LTF F P E VV +F+ ++P++KV +++ P Sbjct 21 ALVGCSDKNASVGNGNGEKIELTFMFRGQPQEQTAYKNVVKKFEEKHPNVKVNIVVTSPD 80 Query 77 -VMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGAL 135 +L AG K PDV + VLLD+ + + + D Sbjct 81 QYATKLRAAIAGRKIPDVFYFNPGELRAYVNSNVLLDITKYVENSKGVNLQ---DIWEKG 137 Query 136 YETFTFNG---GQ---YAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAA 189 + F+G GQ Y P+ L YNK +F+ AG+P P ++P+++ EF+D Sbjct 138 VNKYRFDGEKVGQGNLYGLPKDLGPFALGYNKTMFEKAGIPLPDK--DKPYTWQEFIDVC 195 Query 190 QALTKQGR-SGRDRQWGF-VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEA 247 + LTK G+ QWG +NA + F +NG W + T + D F+EA Sbjct 196 KKLTKDTNGDGKLDQWGTGLNATWTLQG---FVWSNGADWI--DESKTKVTVDDPKFIEA 250 Query 248 VQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPL 307 +QF+AD+ NK+KV PS AE Q++ T + G+ G G W FD+ ++D+ P Sbjct 251 LQFFADMQNKYKVTPSIAEAQTLDTYQRWLRGQLGFFPVGPWDLAAFDQQIKFEYDLIPW 310 Query 308 PIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATG-PVGQALIGESRLFVP 361 P G G+ A +G G+ +++ ++ +A E + + P GQ + + R+ +P Sbjct 311 PAGSTGKPATW-VGSLGIGVSSMTKHPKEAVELALYLSADPEGQKALVDQRVQLP 364 >gi|330468427|ref|YP_004406170.1| extracellular solute-binding protein [Verrucosispora maris AB-18-032] gi|328811398|gb|AEB45570.1| extracellular solute-binding protein [Verrucosispora maris AB-18-032] Length=426 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 117/418 (28%), Positives = 180/418 (44%), Gaps = 31/418 (7%) Query 27 AAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKV--RALLSGPGVMQQLATF 84 ++G A DDD +T + +E+ +V F +PDI V + + +M +L T Sbjct 23 SSGDKATDDDGITVVLFGDAEEIAGYRDLVAGFTTAHPDIPVTLSPVATQDELMARLTTS 82 Query 85 CAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGG 144 AGG+ PDV + Y + A +GV+ + + L + +SD + F F+G Sbjct 83 FAGGQPPDVFLLNYRRYGQFAAQGVIEPVQSYLDSSEEIR---ESDFSPRALDAFRFDGR 139 Query 145 QY-AFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQ 203 + P+ S ++YN LF AG+P P W ++ +FL AA+ALT+ GR G Sbjct 140 ELTCLPQNLSSLVVYYNVDLFTAAGIPAPTAGW----TWDDFLAAAKALTRDGRYG---- 191 Query 204 WGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNF-DHDGFLEAVQFYADLTNKHKVAP 262 V S F +NG P L D+ AV ++ DL ++H V P Sbjct 192 ---VGVDPSLPRLAPFVWSNGGELVDDPDKPNRLTLTDNPSSRAAVDWFLDLQSRHGVVP 248 Query 263 SAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGV 322 AE+QS S+ F G G+ L T +DVAPLP+ P GR A S + Sbjct 249 PDAEEQSESSEARFLRGTLGMYLNSRVAVPTLRTITDFTWDVAPLPVAPGGRPA-SILHS 307 Query 323 TGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNL 382 ++A AW F+++A G GQ + ES VP NS F + + + Sbjct 308 DAYCMSAGLADHGPAWRFIEYAMGDAGQRTLAESGRTVPSRLEVANSPAFLDPTKAPRSS 367 Query 383 AVLSEGPAYSEGLPVTPAWEKI-----AALMDRYFGPVLRGSRPATSLTGLSQAVDEV 435 V + Y P T +W ++ + L + ++G + R GL Q D V Sbjct 368 QVFLDAEPYLRATPRTGSWSRVEKEGNSLLAEVFYGRIDRED-------GLRQLEDRV 418 >gi|170761359|ref|YP_001785624.1| sugar ABC transporter, sugar-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169408348|gb|ACA56759.1| sugar ABC transporter, sugar-binding protein [Clostridium botulinum A3 str. Loch Maree] Length=442 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 92/325 (29%), Positives = 149/325 (46%), Gaps = 14/325 (4%) Query 47 DELRPRMRVVNEFQRRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELAD 106 +E + ++ F+ ++P KV ++ T G K PDV+ + + A Sbjct 57 EEKKVNEDIIKLFEEKHPGTKVNLQYIPEEYTTKIDTLFLGKKAPDVIYGHPKYFTKWAS 116 Query 107 RGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDD 166 +G+L+DL D+ + K ++ LY+ F + G A ++YNK LFD Sbjct 117 QGLLMDLTEKFNEDKELMNDSKFNT--KLYDAFKYEGKNIATVNGADTMVVYYNKDLFDA 174 Query 167 AGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVP 226 AGV P W++ +F +AA+ LT G G+ +Q+G V+ ++ A F +NG Sbjct 175 AGVEYP----NEKWTWEQFAEAAKKLTIMGEDGKPKQFG-VSIDGAYSLAETFMFSNGGK 229 Query 227 WSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALA 286 W NP + F+ +EA+Q DL K+KVAP++++ + + F GK + + Sbjct 230 WFDDMNNPKEVKFNSKENIEALQMMQDLIFKYKVAPTSSDSKVLGGG--FDAGKIAMTID 287 Query 287 GHWRYQTFDRADGLDFD--VAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFA 344 G W R D DF +A +P P G+ G AI+ T++ D AWEF KF Sbjct 288 GVW--SVVYRKDIKDFKWGIAEIPTVP-GKEKRIPALYAGYAISNTTKNPDLAWEFSKFM 344 Query 345 TGPVGQALIGESRLFVPVLRSAINS 369 Q L+ S L + + NS Sbjct 345 QSDEAQKLLASSGLITVINKKIANS 369 >gi|56965534|ref|YP_177267.1| sugar ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56911779|dbj|BAD66306.1| sugar ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length=442 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/327 (30%), Positives = 153/327 (47%), Gaps = 35/327 (10%) Query 38 LTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG-VMQQLATFCAGGKCPDVLMA 96 LT+ ++P+ + RV+ EF++ +P IKVR G + Q+L T AGG PDV Sbjct 36 LTWLVRSDPNLIEWEHRVIEEFEKEHPGIKVRLQTIPQGEIDQKLQTMIAGGNVPDV--- 92 Query 97 WELTYAE-----LADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQ 151 W +A+ G L DL + +D + L E + G + P Sbjct 93 WSPNWADSGFGGYHKLGALKDLTPYIEQDPEVVEGIDE----TLLEIYRTEEGTFGLPIL 148 Query 152 WSGNFLFYNKQLFDDAGVPPPPGSWE-RPWSFAEFLDAAQALTKQGRSGRDRQWGFVN-- 208 G+FL+YN+ LFD AG+ PPP WE + W + ++AA+A+T+ R +G +N Sbjct 149 SMGSFLYYNRDLFDAAGIEPPPTDWEDKSWDWDAMIEAAKAITENDLPPTQRVYGILNDN 208 Query 209 -----AWVSFYAAGLFAMNNGVPWSV--PRMNPTHLNFDHDGFLEAVQFYADLTNKHKVA 261 AW+ + LFA + P + N+ EA+Q DL N+H+V Sbjct 209 SPNRDAWM--FGGDLFAEETYETGELVEPTVTTNPRNY------EAIQARYDLINEHEVM 260 Query 262 PSAAEQQSMST-ADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDI 320 P +E +++ +D F G+ G+ + G W + + D LD+ +A P R + Sbjct 261 PPQSEVAALAQLSDPFLSGRVGMVMKGGWGTRQYANTD-LDWGLAAYPYTNEDRQIP--L 317 Query 321 GVTGLAIAATSRRKDQAWEFVKFATGP 347 V +I+ S+ D+AWEF+KF P Sbjct 318 YVDPWSISEGSKHPDEAWEFLKFLMDP 344 >gi|269839523|ref|YP_003324215.1| extracellular solute-binding protein family 1 [Thermobaculum terrenum ATCC BAA-798] gi|269791253|gb|ACZ43393.1| extracellular solute-binding protein family 1 [Thermobaculum terrenum ATCC BAA-798] Length=442 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 114/387 (30%), Positives = 178/387 (46%), Gaps = 23/387 (5%) Query 47 DELRPRMRVVNEFQRRYPDIKVR--ALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAEL 104 ++L+ R R+ F+ R+P + V+ L +G ++L T A G PDV WE Sbjct 58 EDLKIRDRINRAFEARHPGVTVKQETLPAGTNYFEKLQTMIAAGNPPDVFDMWEGYVQPY 117 Query 105 ADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGN--FLFYNKQ 162 A G LLDL+ L D + K+D + E ++NG Y+ P ++ LFYNK Sbjct 118 AQAGQLLDLDPYLQSDPTIS---KADFDPRILEVNSWNGKVYSLPIEYVPYPAALFYNKD 174 Query 163 LFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAM- 221 LF AGV PP SW+ + + L+AA+ LT + G+ QWG + SFY L+ + Sbjct 175 LFARAGVKPPDSSWD----WRDVLEAARRLTVT-QGGKVTQWGIAFDY-SFYPTWLYWIW 228 Query 222 NNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSM-STADLFSVGK 280 NG V + T +A+QF+AD+ ++KVAP+A + + A+ F GK Sbjct 229 ANGA--DVFNKDQTACALTDPKATQAIQFWADMLTRYKVAPTATTLKMLGGPANAFKTGK 286 Query 281 AGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEF 340 + L W FD+ L + A +P G G+ A + +T AI+ S+ + AWE+ Sbjct 287 VAMYLGAGWEPSGFDQNPRLRYGFALVPKGLTGQRATYLMNLT-WAISPQSKMQRTAWEY 345 Query 341 VK-FATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTP 399 VK FAT G+ L E VP + + + + + E Y+ Sbjct 346 VKYFATE--GEKLRLEVISSVPSYKPLYSQ--WLTPEKEKKGYGIYIEEAKYAHIPGAGA 401 Query 400 AWEKIAALMDRYFGPVLRGSRPATSLT 426 W+KI+ ++ V G A+ T Sbjct 402 KWDKISTIIQSELDLVFSGREQASQAT 428 >gi|229826403|ref|ZP_04452472.1| hypothetical protein GCWU000182_01775 [Abiotrophia defectiva ATCC 49176] gi|229789273|gb|EEP25387.1| hypothetical protein GCWU000182_01775 [Abiotrophia defectiva ATCC 49176] Length=456 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 107/393 (28%), Positives = 177/393 (46%), Gaps = 36/393 (9%) Query 60 QRRYPDIKVRAL-LSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLA 118 +YP+I + + + G ++ T A G PD++ E + + A +GVL DL+ L Sbjct 85 HEKYPEITLEVMAIPNDGYDTKIQTMIASGDAPDIIQVGEASNS-YASKGVLEDLSKL-- 141 Query 119 RDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWER 178 A + G T+T+ YA P++ ++YNK +FD AGV P + Sbjct 142 --SETAGLNLAKRFGTATSTYTWQNTLYAMPDRGGAMIVYYNKDMFDAAGVSYPT----K 195 Query 179 PWSFAEFLDAAQALTKQGRSGRDRQWGFVNA-----WVSFYAAGLFAMNNGVPWSVPRMN 233 W++ + L+AA+ LT + G Q+GF W+SF N G S+ N Sbjct 196 DWTWKDLLEAAKKLTIT-KDGVVEQYGFAAGGWWPWWMSF-----MYQNGG---SILDSN 246 Query 234 PTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTAD-----LFSVGKAGIALAGH 288 ++ + +EA+ FY DL +K+KVAPSA + D LF+ G I + G Sbjct 247 LENVTVNSPENIEAINFYNDLVHKYKVAPSADDYSRFGLKDGQPDPLFAQGHCAINITGF 306 Query 289 WRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPV 348 W + + +GL++D+AP+ G A G +GLAI + D A+ ++F T Sbjct 307 WNVGSLESVEGLNWDMAPMWKNKVG--ATFSFG-SGLAIPKGGKNVDAAFRAIEFLTSLD 363 Query 349 GQALIGESRLFVPVLRSAINSHGF---ANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIA 405 GQ I E++ P + S F A A R N ++ P+ P W +I Sbjct 364 GQKPIVENKQDAPANVELLQSDLFLKPAWAEGRNMNFNAFADSADIIVSPPLHPKWNEIQ 423 Query 406 ALMDRYFGPVL-RGSRPATSLTGLSQAVDEVLR 437 + D F + G A +L + + +++V++ Sbjct 424 RVFDENFSVLFAEGGDCAETLKKIEKELNDVIK 456 >gi|162451329|ref|YP_001613696.1| sugar ABC transporter substrate-binding protein [Sorangium cellulosum 'So ce 56'] gi|161161911|emb|CAN93216.1| Multiple sugar transport system substrate-binding protein [Sorangium cellulosum 'So ce 56'] Length=440 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 119/441 (27%), Positives = 188/441 (43%), Gaps = 43/441 (9%) Query 20 AASLAPWAAGCAADDD-------DALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALL 72 AS++P AGCA+ D +TF P+E + F+R +P+I V Sbjct 12 CASISP--AGCASKADAPPQVARTTITFVGWGMPEERAIMRSALAAFERIHPEIHVE-YT 68 Query 73 SGPGV----MQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELK 128 PGV + +L + PDV + + E+ +GVL D++ L+ + Sbjct 69 QVPGVGYDYLNKLRLMIVAKRAPDVFYVPDGAFGEMVSQGVLRDIDGLVQESRTLDV--- 125 Query 129 SDSIGALYETFTFNG------GQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSF 182 +D + + +NG YA P+ L+YNK GVP P E P ++ Sbjct 126 ADIWPTALDRYRWNGRVLHEGSLYALPKDIGPTVLYYNKDALRRRGVPAPDP--EVPMTW 183 Query 183 AEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHD 242 + + A +ALT R G + WG Y + +++ + + R D D Sbjct 184 DQAIAAFRALTY--REGYVQHWGITG---YPYESAVWSAGGEIVDAEKR----RWLMDSD 234 Query 243 GFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDF 302 ++AVQ+ ADL +H VAP+ A ++LF G + + G W + R D+ Sbjct 235 VSMDAVQWCADLALRHHVAPNLARSGGAGQSELFEAGLVAMHIDGRWMVPRYRRMR-FDW 293 Query 303 DVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPV 362 DVAP+P+ G + S G GLA++A SRR +A+ V++ GP GQ + S L VP Sbjct 294 DVAPVPVPKPGMTSVSWSGSVGLAVSAASRRIAEAFTLVEYLAGPEGQRELARSGLQVPN 353 Query 363 LRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPA----WEKIAALMDRYFGPVLRG 418 RS + F +R + V S P T W ++ + V RG Sbjct 354 QRSVAATAAFLQPGQRPAHAGVFLRAAETSRPSPETELPNAFWHEV---FSSFLPQVWRG 410 Query 419 SRPATSLT-GLSQAVDEVLRN 438 R A L L+ V++ +R Sbjct 411 ERRARELLPALAPIVEQTMRE 431 >gi|239617426|ref|YP_002940748.1| extracellular solute-binding protein family 1 [Kosmotoga olearia TBF 19.5.1] gi|239506257|gb|ACR79744.1| extracellular solute-binding protein family 1 [Kosmotoga olearia TBF 19.5.1] Length=428 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 100/324 (31%), Positives = 151/324 (47%), Gaps = 41/324 (12%) Query 37 ALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG-VMQQLATFCAGGKCPDVLM 95 L ++F +P+ ++ F+ +P IK+ P +LA A PDV+ Sbjct 23 TLQYWFW-DPNFRDKEQEMIERFEATHPGIKIELTALPPSSYWTKLAAMAAAKSLPDVMA 81 Query 96 AWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYET-FTFNGGQYAFPEQWSG 154 + +LAD+G L+DL L+ RD K D ++ E+ F G Y P W G Sbjct 82 MHPNSVEDLADQGALMDLTGLILRDFN-----KEDYFWSVLESSFNIRGKYYGVPFAWVG 136 Query 155 NFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALT-KQGRSGRDRQWGFVNAWVSF 213 + L+YNK LFD GVP P W++ +FL+ A+ALT + G+ WG+ A+ S Sbjct 137 SVLYYNKDLFDKYGVPYPT----EDWTWEDFLERAKALTIDEDGDGKIDIWGY--AFFSR 190 Query 214 YAA--GLFAMNNG-------VPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSA 264 YA G N+G + W+ P N + ++F ADL N +KV+P Sbjct 191 YAVFDGWILQNDGDYLDRENMRWA-PNQNAK----------DTIKFLADLVNVYKVSPKP 239 Query 265 A--EQQSMSTADLFSVGKAGIALAGHWRYQTFDRAD---GLDFDVAPLPIGPRGRAACSD 319 + LF+ GKA + G W + F R D ++D+A +P GP + Sbjct 240 KYYDLDKKKIKILFAQGKAAMITEGTWNIK-FMREDIPANFNWDIAYIPRGPHWKENVMH 298 Query 320 IGVTGLAIAATSRRKDQAWEFVKF 343 GLAIAA S+ ++AWEF+KF Sbjct 299 AWADGLAIAANSKHPEEAWEFIKF 322 >gi|256831753|ref|YP_003160480.1| extracellular solute-binding protein family 1 [Jonesia denitrificans DSM 20603] gi|256685284|gb|ACV08177.1| extracellular solute-binding protein family 1 [Jonesia denitrificans DSM 20603] Length=447 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 105/372 (29%), Positives = 176/372 (48%), Gaps = 28/372 (7%) Query 6 FERRSLLRGAGALTAASLAPWAAGCAADDDDA---LTFFFAANPDELRPRMRVVNEFQRR 62 ++ ++ L ASLA A + DDD LTF F DE + VV ++ Sbjct 1 MKKSRFIQAGAVLLTASLALTACSGGSGDDDGTKKLTFMFRGGEDEKKAYEEVVATYEEA 60 Query 63 YPDIKVRALLS-GPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQ 121 ++V +++ +L G + PDV A+ GV++D+ + + + Sbjct 61 -TGVEVDIIVTTADEYSTKLKAAITGRQVPDVFYIAPGEVQGFANSGVVMDITEHVEKSE 119 Query 122 AFAAELKSDSIGAL-YETFTFNG---GQ---YAFPEQWSGNFLFYNKQLFDDAGVPPPPG 174 + ++I +++ ++G GQ YA P+ + YNK +F++AG+P P Sbjct 120 I----VDFNNIWQYGVDSYRYDGSVQGQGAIYAMPKDVGPFAMGYNKTMFEEAGIPIPDP 175 Query 175 SWERPWSFAEFLDAAQALTKQGR-SGRDRQWGF-VNAWVSFYAAGLFAMNNGVPWSVPRM 232 + P++F E+LD A+ LTK G QWG +N S A F +NG W Sbjct 176 --DEPYTFEEWLDVAKKLTKDTDGDGELDQWGTGLNINWSLQA---FVWSNGGDWL--SE 228 Query 233 NPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQ 292 + + D F EA+QF AD+ KHKV PS A+ Q++ T + G+ G G W Sbjct 229 DGKTVTVDTPEFAEALQFMADVEQKHKVTPSTAQAQTLDTYQRWMKGEIGFFPVGPWDVS 288 Query 293 TFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATG-PVGQA 351 T++ D D+D+ P P+G G A IG G+A +AT++ ++A + + + T P GQ Sbjct 289 TYNELD-FDYDLIPYPVGKTGEPATW-IGTLGIAASATTKHPEEAVDLLLYLTADPTGQK 346 Query 352 LIGESRLFVPVL 363 + ++ + +P L Sbjct 347 ALVDANIQIPNL 358 >gi|15614427|ref|NP_242730.1| hypothetical protein BH1864 [Bacillus halodurans C-125] gi|10174482|dbj|BAB05583.1| BH1864 [Bacillus halodurans C-125] Length=461 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 100/340 (30%), Positives = 158/340 (47%), Gaps = 16/340 (4%) Query 46 PDELRPRMRVVNEFQRRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELA 105 PDEL +V+ F+ P+IKV + ++ T AGG PDV+ + + Sbjct 53 PDELAVFNELVDNFENDNPNIKVNVIHIPDDYSGKMNTMLAGGTAPDVVFTSDGDFGGWV 112 Query 106 DRGVLLDLNTLLARDQAFAAELKSDSIGALYE---TFTFNGGQYAFPEQWSGNFLFYNKQ 162 G+ L++ ++ + + E +S + Y G YA P+ + LFYNK+ Sbjct 113 KAGLFLNIQDMV-EESSINLEDMWESALSRYRWDGRVLGEGDLYALPKDIGPSALFYNKE 171 Query 163 LFDDAGVPPPPGSWERPWSFAEFLDAAQALT-KQGRSGRDRQWGFVNAWVSFYAAGLFAM 221 LFD+AGVP P E P ++ E L+ A+ALT + +GR Q+G W G Sbjct 172 LFDEAGVPYPDP--EVPMTWDELLEKAKALTIDENGNGRPDQFGLGPIWWE----GFIWS 225 Query 222 NNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKA 281 N G S R T + +EA+QF ADLT+ HKVAP + ++M +F G+ Sbjct 226 NGGDILSEDR---TTFVMNEPEAVEALQFVADLTHVHKVAPDSRSLEAMDADQMFETGRI 282 Query 282 GIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFV 341 + AG W T+ + D D+DVAP P G G ++ G G AI + ++A++ + Sbjct 283 AMMTAGRWMVPTYRKLD-FDWDVAPPPAGATGVSSSW-SGSVGYAINKDTNFPEEAFQLI 340 Query 342 KFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGN 381 ++ G GQ + E +P +S + F + N Sbjct 341 EYLAGERGQEIQTELGFAIPTYKSVSETDVFLQPGEKPEN 380 >gi|308068529|ref|YP_003870134.1| sugar ABC transporter periplasmic protein [Paenibacillus polymyxa E681] gi|305857808|gb|ADM69596.1| ABC-type sugar transport system, periplasmic component [Paenibacillus polymyxa E681] Length=437 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 90/338 (27%), Positives = 162/338 (48%), Gaps = 26/338 (7%) Query 38 LTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG-VMQQLATFCAGGKCPDVLMA 96 LTF F DE + V+ +F+ +P +KV+ +++ +L G PD+ Sbjct 27 LTFMFRGGTDEQKAYKEVIKKFEEEHPGVKVKMVVTAADQYATKLRAAITGNNLPDIFYF 86 Query 97 WELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGAL-YETFTFNG---GQ---YAFP 149 + GVL +L + +++ ++K D+I + + ++G GQ Y P Sbjct 87 APGDVKAYVNSGVLKNLTPYIEKNK----DIKLDNIWKYGVDLYRYDGKMAGQGDIYGMP 142 Query 150 EQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGR-SGRDRQWG--F 206 + L YNK +F+ AGVP P ++P+++ EF+ +Q LTK G+ Q+G F Sbjct 143 KDLGPFALGYNKTMFEKAGVPLPDK--DKPYTWDEFIKVSQELTKDTNGDGKPDQYGTGF 200 Query 207 VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAE 266 W A F +NG W + T + D F EA+Q++AD+ NK+K+ P + Sbjct 201 NVQW----ALQAFVWSNGADWL--DESKTKVTIDDPKFAEALQYFADMQNKYKITPGIEQ 254 Query 267 QQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLA 326 Q++ T + G+ G W TF++ ++D+ P P G G++A IG G+ Sbjct 255 SQTLDTYQRWMKGEMAFFPVGPWDMSTFEKL-PFEYDLLPFPAGSTGKSATW-IGSLGIG 312 Query 327 IAATSRRKDQAWEFVKF-ATGPVGQALIGESRLFVPVL 363 +++ ++ D+A E V + T G + ++++ +P L Sbjct 313 VSSKTKYPDEAVELVNYLTTSKEGMKQLVDAKVQIPNL 350 >gi|146296569|ref|YP_001180340.1| extracellular solute-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410145|gb|ABP67149.1| extracellular solute-binding protein, family 1 [Caldicellulosiruptor saccharolyticus DSM 8903] Length=449 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 103/375 (28%), Positives = 169/375 (46%), Gaps = 34/375 (9%) Query 8 RRSLLRGAGALTAASLAPW----AAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRY 63 RR L+ G + SL+ + A A LT+ P E ++V +F RY Sbjct 6 RRVLVVGICLVFLISLSVFVNFEALPTQASSKIKLTWMGFGQPQEKEIYTKLVKKFMERY 65 Query 64 PDIKVRALLSGPGVM--QQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQ 121 +I V + + PG ++ A GK PDV D G LL + + Sbjct 66 KNITVDYICTAPGQEYGMKIQAVMASGKLPDVFYVPPENLRAWVDAGKLLKITKYVK--- 122 Query 122 AFAAELKSDSI------GALYETFTFNGGQ-YAFPEQWSGNFLF-YNKQLFDDAGVPPPP 173 + E+ +++ +Y+ T G YA P+ G F F YNK +F G+P P Sbjct 123 -VSKEINLNNVWPQAISRYMYDGKTIGKGDIYALPKD-VGPFAFGYNKTMFKKEGIPLPD 180 Query 174 GSWERPWSFAEFLDAAQALTKQGR-SGRDRQWGF---VNAWVSFYAAGLFAMNNGVPWSV 229 ++P+++ EF++ + +TK G+ QWG VN + +F +NG W Sbjct 181 P--KKPYTWNEFVEICKKVTKDTNGDGKLDQWGTDLDVN-----WTLHMFVWSNGADWL- 232 Query 230 PRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHW 289 T + D F+EA+QF+ADL NK+KV P+A + QS+S + G+ G W Sbjct 233 -DSTKTKVTIDDPKFIEALQFFADLRNKYKVTPTAVQGQSISGYQRWLNGQLAFFPVGPW 291 Query 290 RYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKF-ATGPV 348 +++ ++D+ P P+ PR + + +G GL +AA ++ QA + F +T Sbjct 292 DVPVYNKLK-FEYDLIPPPVSPRTKKPATWLGSLGLGVAANTKYPQQAVDLAAFLSTDRE 350 Query 349 GQALIGESRLFVPVL 363 GQ + + L +P L Sbjct 351 GQRMAYQLGLQIPNL 365 >gi|229826396|ref|ZP_04452465.1| hypothetical protein GCWU000182_01768 [Abiotrophia defectiva ATCC 49176] gi|229789266|gb|EEP25380.1| hypothetical protein GCWU000182_01768 [Abiotrophia defectiva ATCC 49176] Length=453 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 93/380 (25%), Positives = 159/380 (42%), Gaps = 27/380 (7%) Query 2 VNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQR 61 KP E G+G+ A + ++ +++ L F N E+ + + +EF Sbjct 27 TTKPTEDNGSKNGSGSAVAKVSSVKSSDKKSNEKVELRFLLWGNQKEIEYKTKWTDEFNA 86 Query 62 RYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQ 121 + +I V G +L + D++ E + V L++ + +D Sbjct 87 AHDNIHVNLEAIPEGFHDKLTVQVSSNTLADLVQIAGDFGGEYFKKDVFAPLDSYIEKDG 146 Query 122 AFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWS 181 LK + +L ++NG YA P + F+ YNK +F + +P P W Sbjct 147 -----LKGAWVDSLMSGLSYNGSVYAAPTTFYSGFIIYNKTMFKENNIPLPTNDWTEE-- 199 Query 182 FAEFLDAAQALTKQGRSGRDRQWG--FVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNF 239 +FL AA+ALTK G + WG F + W A L+ W +M Sbjct 200 --DFLKAAKALTK--GEGDSKVWGADFSSWWAYSLARNLYDGYKAWDWEAGKMTA----- 250 Query 240 DHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRA-- 297 D +GF + VQF DL HK++P+ + + F GK + + W +F+ A Sbjct 251 DTEGFKDGVQFITDLYRVHKISPTPTMAKDVGGT--FETGKYAMTVGASWDMASFNEAIG 308 Query 298 DGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKF--ATGPVGQALIGE 355 D ++D+ P + S + T + I+A S KD+AWE++K+ A G V + + Sbjct 309 DKFEWDIVTFPSNSKYGKWRSPLWTTAIGISADSPHKDEAWEYIKYMSAQGKVQEEM--- 365 Query 356 SRLFVPVLRSAINSHGFANA 375 + +P L+S F N+ Sbjct 366 EIIGLPALKSISEDSNFINS 385 >gi|310641413|ref|YP_003946171.1| sugar ABC transporter periplasmic protein [Paenibacillus polymyxa SC2] gi|309246363|gb|ADO55930.1| ABC-type sugar transport system, periplasmic component [Paenibacillus polymyxa SC2] gi|343096489|emb|CCC84698.1| maltose-binding periplasmic protein MMBP [Paenibacillus polymyxa M1] Length=447 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/338 (27%), Positives = 158/338 (47%), Gaps = 26/338 (7%) Query 38 LTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPG-VMQQLATFCAGGKCPDVLMA 96 LTF F DE + V+ +F+ +P +KV+ +++ +L G PD+ Sbjct 37 LTFMFRGGTDEQKAYKDVIKKFEEEHPGVKVKMVVTAADQYATKLRAAITGNNLPDIFYF 96 Query 97 WELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGAL-YETFTFNG---GQ---YAFP 149 + GVL DL + + + ++ D+I + + ++G GQ Y P Sbjct 97 APGDLKAYVNSGVLKDLTPYIDK----SKDINLDNIWKYGVDLYRYDGKMAGQGNIYGMP 152 Query 150 EQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGR-SGRDRQWG--F 206 + L YNK +F+ AGVP P ++P+++ EF+ Q LTK G+ Q+G F Sbjct 153 KDLGPFALGYNKTMFEKAGVPLPDK--DKPYTWDEFIKVNQELTKDTNGDGKPDQYGTGF 210 Query 207 VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAE 266 W A F +NG W + T + D F EA+QF+AD+ NK+K+ P + Sbjct 211 NVQW----ALQAFVWSNGADWL--DESKTKVTIDDPKFAEALQFFADMQNKYKITPGIEQ 264 Query 267 QQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLA 326 Q++ T + G+ G W TF++ ++D+ P P G G+ A IG G+ Sbjct 265 SQTLDTYQRWMKGEMAFFPVGPWDMSTFEKL-PFEYDLLPFPTGSTGKPATW-IGSLGIG 322 Query 327 IAATSRRKDQAWEFVKF-ATGPVGQALIGESRLFVPVL 363 +++ ++ D+A E V + T G + ++++ +P L Sbjct 323 VSSKTKYPDEAVELVNYLTTSKEGMKQLVDAKVQIPNL 360 >gi|116671929|ref|YP_832862.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116612038|gb|ABK04762.1| carbohydrate ABC transporter substrate-binding protein, CUT1 family [Arthrobacter sp. FB24] Length=447 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 106/426 (25%), Positives = 182/426 (43%), Gaps = 45/426 (10%) Query 41 FFAANPDELRPRMRVVNEFQRRYPDIKVRALLSG-PGVMQQLATFCAGGKCPDVLMAWEL 99 ++ + ++L + ++FQ+ PDIKV+ G L GG PDV Sbjct 38 YWLWDANQLPAYQQCADDFQKANPDIKVKITQRGWDDYWSTLTNGFVGGTAPDVFTNHLG 97 Query 100 TYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFY 159 Y ELA LL ++ + +D +L + + G +G +Y P+ W LFY Sbjct 98 RYGELAANKQLLPIDDAVKKDNV---DLSAYNEGLADLWVGQDGKRYGLPKDWDTIGLFY 154 Query 160 NKQLFDDAGV-----------PPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVN 208 NK + AGV P G++E+ + A + K G+ G + GF Sbjct 155 NKAMLSKAGVSEEEMKNLTWNPQDGGTYEK-------IIAHLTVDKNGKRGDEA--GFDK 205 Query 209 AWVSFYAAGLFA------------MNNGVPWSVPRMNP--THLNFDHDGFLEAVQFYADL 254 V Y GL + N WS NP TH N+D F ++ ++A L Sbjct 206 NNVDVYGLGLNGGGDSSGQTEWSYLTNTTGWSHTDKNPWGTHYNYDDPKFQSSIDWFAGL 265 Query 255 TNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGR 314 +K + P + AD F+ GK+ I G W + G++ +AP P+GP G+ Sbjct 266 VDKGYM-PKLETTVGAAMADTFAAGKSAINAHGSWMIGQYTGYKGVEVGIAPTPVGPEGK 324 Query 315 AACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFAN 374 A G+ +I A +++KD A ++V++ Q ++ + P L+++ S A Sbjct 325 RASMFNGLAD-SIWAGTKKKDAAIKWVEYLASAPCQDVVASKAVVFPALKAS--SEKAAE 381 Query 375 AHRRVG-NLAVLSEGPAYSEGL--PVTPAWEKIAALMDRYFGPVLRGSRPATSLTGLSQA 431 A + G ++ +E P+T K+ +M+ V+ G +PA+SLT + Sbjct 382 AFKAKGVDVTAFTEHVKNGTTFLYPITDNTAKVKGIMEPAMDAVVSGKKPASSLTEANNQ 441 Query 432 VDEVLR 437 V+++ + Sbjct 442 VNDLFK 447 >gi|186685701|ref|YP_001868897.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186468153|gb|ACC83954.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme PCC 73102] Length=448 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 112/416 (27%), Positives = 184/416 (45%), Gaps = 37/416 (8%) Query 38 LTFFFAANPDELRPRM-RVVNEFQRRYPDIKVRALLSGPGVMQQLATFCAG-GKCPDVLM 95 LT + NP R + ++V++F + +PDI+V +L G Q A G P L+ Sbjct 54 LTLWQGVNPPPNRDVLQKLVDKFNQSHPDIQVESLYVGQQDQQTPKILAAVVGNAPPDLL 113 Query 96 AWELTYAELADRGVLLDLNTLLARDQAF-AAELKSDSIGALYETFTFNGGQYAFPEQWSG 154 + T A G L++LN LL D+ + +K++ ALY + +NG ++ P + Sbjct 114 WYNPTIA-----GQLVELNALLPLDELLDKSPIKAEIDPALYGSMKYNGKIWSVPFATNN 168 Query 155 NFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGR-SGRDRQWGF------- 206 +FY LF AG+ P +W+ EF A+ LT+ GR Q+G Sbjct 169 VGIFYRPSLFKAAGITELPRTWQ------EFAQVAKKLTRDTNGDGRIDQYGMFLPLGKG 222 Query 207 ---VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNF-DHDGFLEAVQFYADLTNKHKVAP 262 V W+ F +G + +G N +N ++ G + A+QF+ DL K Sbjct 223 EFTVFTWLPFMWSGGGELVSG-----DSQNAAAVNLQNNQGAIAALQFWRDLITKGSAIL 277 Query 263 SAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGV 322 S E + T DL S GK + L G W F G+DFDV P+P+G + G Sbjct 278 SGPE-RGYETDDLLS-GKVAMQLNGPWTLGQFQET-GVDFDVFPIPVGQKPATVIG--GE 332 Query 323 TGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNL 382 T +R+ A++FV++A Q + ++PV + S + + +++ + Sbjct 333 NLFFFKTTPKREKAAFKFVEYALSEEFQTELALGTGYLPVNLKSRESPKYQDFIKKIPQV 392 Query 383 AVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRG-SRPATSLTGLSQAVDEVLR 437 V + Y P+ P + +I+ + R VL G S PA SL Q +D + + Sbjct 393 KVFLDQAKYGRSRPIFPGYNRISDSVGRAIESVLLGKSSPAESLKATQQRLDLIFK 448 >gi|257877373|ref|ZP_05657026.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811539|gb|EEV40359.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length=418 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 91/316 (29%), Positives = 145/316 (46%), Gaps = 36/316 (11%) Query 37 ALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMA 96 +TF+ + + D++ +++N++ +V A V ++L T AGG+ PDV++ Sbjct 36 TITFWGSWSGDQVDQLNQLINQYNDSQDKYEV-AYKVQDNVEEKLLTGMAGGEIPDVILW 94 Query 97 WELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNF 156 + A A + LLDL+ L+A D +++ + + QY P Sbjct 95 DRVNTAMYAQKNALLDLDDLIAEDNIDMTSFYEETV----KEMQYEEKQYGIPLLVDNRS 150 Query 157 LFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTK-QGRSGRDRQWGFVNAWVSFYA 215 LFYNK L D+AGV PP +W+ E LD A+ TK G + V A S Sbjct 151 LFYNKTLLDEAGVEPPT-TWD------ELLDVAEKTTKWDGNT-------LVQAGFSLDD 196 Query 216 AGLFAMNNGVPW------SVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQS 269 GLF M W S+ + T F+ + +E + F+ L N+ KV +Q Sbjct 197 VGLFNM-----WLQQAGGSMLNTDNTATAFNSEAGMEVLDFWDKLMNEAKVY----QQGF 247 Query 270 MSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAA 329 +D F+ GK +A G W +D+ DGL++ + P GP G G GL I Sbjct 248 NDGSDAFAAGKVALAYNGPWALADYDKVDGLEYGIVPPMTGPNGDKGAL-TGGFGLVIPK 306 Query 330 TSRRKDQAWEFVKFAT 345 T++ +D AW+F+K+ T Sbjct 307 TAKNQDAAWDFIKWWT 322 >gi|75907452|ref|YP_321748.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75701177|gb|ABA20853.1| carbohydrate ABC transporter substrate-binding protein, CUT1 family [Anabaena variabilis ATCC 29413] Length=461 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 117/441 (27%), Positives = 187/441 (43%), Gaps = 41/441 (9%) Query 15 AGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRM-RVVNEFQRRYPDIKVRALLS 73 G L + G AD LT + NP R ++V++F + + DI+V A+ + Sbjct 44 VGILVTSGCQVIQNGMKADKVIHLTLWHGVNPPPNRDVFQKLVDKFNQSHTDIQVDAIYA 103 Query 74 GPGVMQQLATFCA--GGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDS 131 G Q A G PD+L + A G L++LN L+ D+ ++ L D Sbjct 104 GQQDQQMPKILAAVVGNASPDIL------WYNPATTGQLVELNALVPLDEMLSSSLIKDE 157 Query 132 IG-ALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQ 190 I +LY + G +A P + +FY LF AG+ P +WE EF + A+ Sbjct 158 IDPSLYPAVEYQGKTWAVPFATNNVGVFYRPSLFKAAGITQLPKTWE------EFREVAK 211 Query 191 ALTKQGR-SGRDRQWGF----------VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNF 239 LT+ GR Q G V W+ F +G G S N + Sbjct 212 KLTRDTDGDGRIDQHGMVLPLGKGEFTVFTWLPFMWSG-----GGELVSKDSQNAAGVTL 266 Query 240 DHD-GFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRAD 298 +++ G + A+Q + DL S E + T DL + GK + L G W F + Sbjct 267 ENNAGAIAALQLWRDLITDGSAVLSGPE-RGYETNDLLA-GKVAMQLTGPWTLGEF-QTS 323 Query 299 GLDFDVAPLPIGPRGRAACSDIGVTGLAI-AATSRRKDQAWEFVKFATGPVGQALIGESR 357 G+DFDV P+P+G R + IG L I + R+ A++F+++A G Q + Sbjct 324 GVDFDVFPIPVGQR---PATVIGGENLYIFKSKPEREKAAFKFLEYAAGEEFQTELALGT 380 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 ++P+ + S + ++V V E Y+ P P + +I+ + R VL Sbjct 381 GYLPINLKSRESAKYQAFVKKVPQAKVFLEQAKYARSRPTFPGYNRISDSVGRAVETVLM 440 Query 418 G-SRPATSLTGLSQAVDEVLR 437 G S PA +L Q +D + + Sbjct 441 GKSSPADALKASQQRLDLIFK 461 >gi|17231769|ref|NP_488317.1| sugar ABC transporter sugar binding protein [Nostoc sp. PCC 7120] gi|17133412|dbj|BAB75976.1| sugar ABC transporter sugar binding protein [Nostoc sp. PCC 7120] Length=461 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 118/441 (27%), Positives = 186/441 (43%), Gaps = 41/441 (9%) Query 15 AGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRM-RVVNEFQRRYPDIKVRALLS 73 G L + G AD LT + NP R ++V++F + + DI+V A+ + Sbjct 44 VGILVTSGCQVIQNGMKADKVIHLTLWHGVNPPPNRDVFQKLVDKFNQSHKDIQVDAIYA 103 Query 74 GPGVMQQLATFCA--GGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDS 131 G Q A G PD+L + A G L++LN L+ D+ A+ D Sbjct 104 GQQDQQMPKILAAVVGNASPDIL------WYNPATTGQLVELNALVPLDEMLASSQIKDE 157 Query 132 IG-ALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQ 190 I +LY + G +A P + +FY LF AG+ P +W AEF + A+ Sbjct 158 IDPSLYPAVAYQGKTWAVPFATNNVGVFYRPSLFKAAGITKLPKTW------AEFREVAK 211 Query 191 ALTKQGR-SGRDRQWGF----------VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNF 239 LT+ GR Q G V W+ F +G G S N + Sbjct 212 KLTRDTDGDGRIDQHGMVLPLGKGEFTVFTWLPFMWSG-----GGELVSKDSQNAAGVTL 266 Query 240 DHD-GFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRAD 298 +++ G + A+Q + DL S E + T DL + GK + L G W F +A Sbjct 267 ENNAGAIAALQLWRDLITDGSAVLSGPE-RGYETNDLLA-GKVAMQLTGPWTLGEF-QAS 323 Query 299 GLDFDVAPLPIGPRGRAACSDIGVTGLAI-AATSRRKDQAWEFVKFATGPVGQALIGESR 357 G+DFDV P+P+G R + IG L I + R+ A++F+++A Q + Sbjct 324 GIDFDVFPIPVGQR---PATVIGGENLYIFKSRPEREKAAFKFLEYAASEEFQTELALGT 380 Query 358 LFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLR 417 ++P+ + S + R+V V E Y+ P P + +I+ + R VL Sbjct 381 GYLPINLKSRESSKYQEFVRKVPQAKVFLEQAKYARSRPTFPGYNRISDSVGRAVETVLM 440 Query 418 G-SRPATSLTGLSQAVDEVLR 437 G S PA +L Q +D + + Sbjct 441 GKSSPADALKASQQRLDLIFK 461 >gi|160934327|ref|ZP_02081714.1| hypothetical protein CLOLEP_03198 [Clostridium leptum DSM 753] gi|156867000|gb|EDO60372.1| hypothetical protein CLOLEP_03198 [Clostridium leptum DSM 753] Length=449 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 96/335 (29%), Positives = 138/335 (42%), Gaps = 34/335 (10%) Query 58 EFQRRYPDIKVRA----LLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDL 113 EF + DIKV S +MQ ++ AGG PD+ A G+++ + Sbjct 73 EFMSQRSDIKVEVQGIPANSWGELMQAISVNIAGGDVPDIADIASEGQRSFAASGIIIPI 132 Query 114 NTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPP 173 + L RD+ E + AL ET ++G Y P W+ L+YNK + + +P P Sbjct 133 DEYLERDKEEMKETLDEIDPALMETMKYDGKTYCLPTVWNNILLYYNKNVLERFNIPEP- 191 Query 174 GSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPW------ 227 E W+ +F++ Q +T + D V YA G N VPW Sbjct 192 ---ESGWTIDDFIEICQTVTSENDGTND---------VYGYAFGNAYFNTIVPWMIVSGG 239 Query 228 SVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAG 287 +V + T L VQ D K+ ++P ++ DLF K AG Sbjct 240 NVLNDDWTESRLTDPDTLAGVQLLYDFVYKYNISPKI--DAGVADLDLFVQDKLAFMSAG 297 Query 288 HWRYQTFDRAD--GLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFAT 345 W+ AD D+DV LPI +A IGV G I A S +D AWEF KF + Sbjct 298 MWQVNALKNADFPVDDYDVVDLPIVKEDKAV---IGVGGAPIFAASEHQDAAWEFAKFLS 354 Query 346 GPVGQ-ALIGESRLFVPVLRSAINS---HGFANAH 376 Q I E +P ++SA ++ FA AH Sbjct 355 SKDFQDTFIVEDGWSIPAVKSAADTLAAKDFAPAH 389 >gi|56962099|ref|YP_173822.1| sugar ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56908334|dbj|BAD62861.1| sugar ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length=421 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 81/312 (26%), Positives = 154/312 (50%), Gaps = 28/312 (8%) Query 46 PDELRPRMRVVNEFQRRYPDIKVR-ALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAEL 104 P EL+ +++ F+ + P IKV + + ++L T AG PDV W + A + Sbjct 44 PAELKGEREILDVFEEKNPGIKVELSHVPWDNFNERLTTMSAGRNQPDVF--WMIDAAAM 101 Query 105 ---ADRGVLLDLNTLLARDQAFAAELKSDS-IGALYETFTFNGGQYAFPEQWSGNFLFYN 160 A +G+L++L+ + + +K D + ++ + G QYA P + + + +N Sbjct 102 TSYASQGMLMELDGFIEE-----SGIKEDEYLPGAWDIGAWEGVQYALPRDLTSHHIVFN 156 Query 161 KQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFA 220 K +FD+AG P P E W++ +FL+AA+A T + G+ Q+G + Sbjct 157 KDMFDEAGHPYP----EAGWTWDDFLEAAKATTIE-EDGKIVQFGI----AGLIWEEMIV 207 Query 221 MNNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGK 280 N G +++ + + + D +EA++F DL + H+VAP A E + + DLF + Sbjct 208 QNGGASFNI---DGSKVEIDSPETIEAIEFMHDLVDVHRVAPLATESEGL--GDLFLANR 262 Query 281 AGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEF 340 A +A AG W ++ ++ ++D+ +P G G S + + I + + ++AW+ Sbjct 263 AAMAFAGPWHWRQYEEDGEFEWDIVEVPAGKAGNK--SQLLGLPIGIGSQTDHPEEAWKL 320 Query 341 VKFATGPVGQAL 352 ++F T GQ++ Sbjct 321 LEFLTHGEGQSI 332 >gi|312127843|ref|YP_003992717.1| extracellular solute-binding protein family 1 [Caldicellulosiruptor hydrothermalis 108] gi|311777862|gb|ADQ07348.1| extracellular solute-binding protein family 1 [Caldicellulosiruptor hydrothermalis 108] Length=449 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 95/351 (28%), Positives = 158/351 (46%), Gaps = 30/351 (8%) Query 28 AGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPGVM--QQLATFC 85 + A +T+ P E ++V +F RY +I V + + PG ++ Sbjct 30 SSVEASSKIKITWMGFGQPHEKELYTKLVKKFMERYKNITVDYICTAPGQEYGMKIQAAM 89 Query 86 AGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSI------GALYETF 139 A GK PDV D G LL + + + E+ ++I +Y+ Sbjct 90 ASGKLPDVFYVPPENLRAWVDAGKLLKITKYVKA----SKEINLNNIWPQAISRYMYDGK 145 Query 140 TFNGGQ-YAFPEQWSGNFLF-YNKQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGR 197 T G YA P+ G F F YNK +F G+P P ++P+++ EF+ + +TK Sbjct 146 TIGKGDIYALPKD-VGPFAFGYNKTMFKREGIPLPDP--KKPYTWEEFVKICKKVTKDTN 202 Query 198 -SGRDRQWGF---VNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEAVQFYAD 253 G+ QWG VN + +F +NG W T + D F+EA+QF+AD Sbjct 203 GDGKLDQWGTDLDVN-----WTLHMFVWSNGSDWL--DNTKTKVTIDDPKFIEALQFFAD 255 Query 254 LTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRG 313 L NK+KV P+A + QS+S + G+ G W +++ ++D+ P P+ PR Sbjct 256 LRNKYKVTPTAVQGQSISGYQRWLNGQLAFFPVGPWDVPVYNKLK-FEYDLIPPPVSPRT 314 Query 314 RAACSDIGVTGLAIAATSRRKDQAWEFVKF-ATGPVGQALIGESRLFVPVL 363 + + +G G +A+T++ QA + F +T GQ + + L +P L Sbjct 315 KKPATWLGSLGFGVASTTKYPQQAVDLAAFLSTDREGQRMAYQMGLQIPNL 365 >gi|297199275|ref|ZP_06916672.1| sugar ABC transporter substrate-binding protein [Streptomyces sviceus ATCC 29083] gi|197716457|gb|EDY60491.1| sugar ABC transporter substrate-binding protein [Streptomyces sviceus ATCC 29083] Length=437 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 111/444 (25%), Positives = 193/444 (44%), Gaps = 36/444 (8%) Query 6 FERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPD 65 F RR L A +L +G + D + + D + R+ N ++YP+ Sbjct 17 FSRRGFLGLGVAAGIITLTACGSGAGSSDGPLVMTVWGGETDRATYQKRI-NLLVKKYPE 75 Query 66 IKVR-ALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFA 124 +KV+ L+ Q++ T AGG PD++ E + + L L+ L A+ Sbjct 76 LKVKLQLIPSESYAQKVQTMIAGGNGPDIMQVAE-NVNVYSSKNQLRPLDDL-AKSAGLD 133 Query 125 AELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPWSFAE 184 + +IG+LY ++ YA P++ ++YNK LF+ G+ P W++ + Sbjct 134 LTQRFGTIGSLY---SYEDKLYAIPDRSGAMIVYYNKTLFEKKGIKAPTAE----WTWDD 186 Query 185 FLDAAQALTKQGRSGRDRQWGFVNA--WVSFYAAGLFAMNNGVPWSVPRMNPTHLNFDHD 242 LDA + LT++G++ WG+ A W +++ A NG PT D D Sbjct 187 TLDAFKELTEKGKT-----WGYGGAGWWPQWWS---MAYQNGGAIIDANGKPTA---DSD 235 Query 243 GFLEAVQFYADLTNKHKVAPSAAEQQSMST----ADLFSVGKAGIALAGHWRYQTFDRAD 298 +EA+Q+ DLT KH V P+ A+ M T F+ G + G W + Sbjct 236 EVVEALQWVGDLTFKHGVVPTKAQYADMGTDVGGDQAFAAGTVAVNATGFWAIAGQAEST 295 Query 299 GLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRL 358 ++D+AP+ G + A + G +GLAI+ T++ D A++ + F T P Q I + Sbjct 296 -FEWDIAPMWRGK--KQAVASFG-SGLAISRTAKNPDNAFKAIDFLTSPAAQQQIIAAAE 351 Query 359 FVPVLRSAINSHGFANA--HRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVL 416 VP S F + N+ V +E + P P W ++ A +D Sbjct 352 DVPANLEVQKSEAFLKPAWMKSDVNMGVFAESSEFLFKAPFIPEWNEMLAAIDTATADFW 411 Query 417 RGSRPA--TSLTGLSQAVDEVLRN 438 G + +LT L + ++ ++++ Sbjct 412 LGKERSAKKALTALQKNLESIIKS 435 >gi|269839497|ref|YP_003324189.1| extracellular solute-binding protein family 1 [Thermobaculum terrenum ATCC BAA-798] gi|269791227|gb|ACZ43367.1| extracellular solute-binding protein family 1 [Thermobaculum terrenum ATCC BAA-798] Length=484 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 97/389 (25%), Positives = 157/389 (41%), Gaps = 37/389 (9%) Query 56 VNEFQRRYPDIKVRALLSG-----PGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVL 110 + E Q RYPDI+++ + ++ T AGG+ DV+M A L+ + VL Sbjct 83 LKEAQERYPDIRLKVTQTSIQGGWSAYADKIITQIAGGEQLDVIMIAIEGLALLSSKRVL 142 Query 111 LDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVP 170 L+ + D L +D L E + G Q FP W+ ++YN ++F + G+ Sbjct 143 RPLDEFIQADSEAYDTLHNDIHKTLREMMQYEGKQMEFPFSWNNMVIYYNTKIFQEEGLK 202 Query 171 PPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAM-----NNGV 225 PP W++ +FL + + + +DR + + SF+ AG+F M NN Sbjct 203 PPSPD----WTWNDFLGVCKQVANVRGTAKDR-YAY-----SFWGAGMFGMCAWYFNNDT 252 Query 226 PWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIAL 285 S + N E +QF DL KH+VAP+ A + F G + Sbjct 253 --SSLTDDWQDSNMLDPKVAETLQFLVDLIRKHRVAPNPAGWDENAQ---FHAGHLVMRT 307 Query 286 AGHWRY--QTFDRADGLDFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKF 343 G W ++ D P GP +G G IA S+ ++AW+ VK Sbjct 308 CGRWCIGASLAEKFTSYDLQYQPHKSGPYKTV----VGTDGWGIATMSQHPNEAWKAVKV 363 Query 344 ATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVG--NLAVLSEGPAYSEGLPVTPAW 401 +G + E +P LRS F R G N + E Y+ +P P + Sbjct 364 LSGKTASRAMVELGGNIPALRSVAEEPAF----REYGPENTEIFYESLDYARTVPSPPNF 419 Query 402 EKIAALMDRYFGPVLRGSRPATSLTGLSQ 430 I ++DR++ + G + L+ Sbjct 420 NIIEPILDRHYSTIWNGQKTVQEAVKLAH 448 >gi|284029480|ref|YP_003379411.1| extracellular solute-binding protein family 1 protein [Kribbella flavida DSM 17836] gi|283808773|gb|ADB30612.1| extracellular solute-binding protein family 1 [Kribbella flavida DSM 17836] Length=453 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 118/466 (26%), Positives = 193/466 (42%), Gaps = 42/466 (9%) Query 1 MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTF-FFAANPDELRPRMRVVNEF 59 M+ R +LL G A TA + + G A D +T ++ + ++ + F Sbjct 1 MIKIKQVRAALLCGLMAATALTACSGSQGDDAAADGPVTLDYWLWDDNQQASYQACADAF 60 Query 60 QRRYPDIKVRALLSG-PGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLA 118 P+I V+ + Q L T A G PDV Y + LLDL + Sbjct 61 HAANPNITVKITQTAWAQYWQNLTTQLAAGDAPDVWTNQVSYYPQFVSSQQLLDLQPYVD 120 Query 119 RDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPG---S 175 D+ + + L E + +G +Y P+ W + YN QL G+ P + Sbjct 121 EDKVDLGQYQD----GLAELWVKDGKRYGLPKDWDTEAIVYNSQLLAKQGIKPADLANLT 176 Query 176 WERPWSFAEFLDAAQALT--KQGRSGRD--------RQWGFV----------NAWVSFYA 215 W P F LT GR+G D + +G+ N W A Sbjct 177 W-NPKDGGTFEQTIAKLTVDANGRNGLDPAFDKTKVKVYGYQPEWNDGSQGQNGWGELAA 235 Query 216 AGLFAMNNGVPWSVPRMNPTHLNFDHDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADL 275 A F + PW T +D +E + +Y LT+K AP +Q ++ + Sbjct 236 ANGFTYLDKNPWG------TQYKYDDPKLVETISWYKALTDKG-YAPRFDKQSTLGIDAV 288 Query 276 FSVGKAGIALAGHWRYQTFDRADGLD-FDVAPLPIGPRGRAACSDIGVTGLAIAATSRRK 334 + GKA + +AG W T+ AD F +APLP+GP G + G++ AI A ++ K Sbjct 289 MNSGKAALTIAGSWTINTYLGADAKQKFALAPLPVGPVGVRKSAINGLSD-AIWAGTKHK 347 Query 335 DQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAH--RRVGNLAVLSEGPAYS 392 D AW++VK+ Q ++G + + P ++SA + A+ R V ++ P + Sbjct 348 DAAWKWVKYLGSADCQNVVGGNAVVFPAIKSATDKALAAHKAKGRDVQVYVDYTKTPGGT 407 Query 393 EGLPVTPAWEKIAALMDRYFGPVLRG-SRPATSLTGLSQAVDEVLR 437 LP+T +I+ ++ V+ G S PA +L +Q V+ +L Sbjct 408 FLLPITDHGTEISQIVQDALQAVILGQSEPADALKKANQQVNSLLN 453 Lambda K H 0.321 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 900442926544 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40