BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2059
Length=511
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609196|ref|NP_216575.1| hypothetical protein Rv2059 [Mycoba... 1004 0.0
gi|253798884|ref|YP_003031885.1| hypothetical protein TBMG_01922... 1004 0.0
gi|289745988|ref|ZP_06505366.1| conserved hypothetical protein [... 1003 0.0
gi|326903672|gb|EGE50605.1| hypothetical protein TBPG_01551 [Myc... 1001 0.0
gi|344219885|gb|AEN00516.1| hypothetical protein MTCTRI2_2097 [M... 1000 0.0
gi|289758179|ref|ZP_06517557.1| adhesion protein [Mycobacterium ... 999 0.0
gi|340627070|ref|YP_004745522.1| hypothetical protein MCAN_20821... 999 0.0
gi|289745334|ref|ZP_06504712.1| adhesion protein [Mycobacterium ... 931 0.0
gi|308375768|ref|ZP_07445030.2| hypothetical protein TMGG_00614 ... 830 0.0
gi|308232019|ref|ZP_07414634.2| hypothetical protein TMAG_02242 ... 819 0.0
gi|167966864|ref|ZP_02549141.1| hypothetical protein MtubH3_0188... 788 0.0
gi|339294984|gb|AEJ47095.1| hypothetical protein CCDC5079_1905 [... 786 0.0
gi|296166625|ref|ZP_06849053.1| ABC superfamily ATP binding cass... 316 8e-84
gi|183985039|ref|YP_001853330.1| hypothetical protein MMAR_5071 ... 315 1e-83
gi|15827093|ref|NP_301356.1| periplasmic solute-binding proteins... 315 2e-83
gi|118619326|ref|YP_907658.1| hypothetical protein MUL_4147 [Myc... 312 1e-82
gi|342862408|ref|ZP_08719048.1| periplasmic solute binding prote... 287 2e-75
gi|254822722|ref|ZP_05227723.1| hypothetical protein MintA_22524... 283 4e-74
gi|41406587|ref|NP_959423.1| hypothetical protein MAP0489c [Myco... 253 4e-65
gi|118463328|ref|YP_879863.1| periplasmic solute binding protein... 253 4e-65
gi|254773541|ref|ZP_05215057.1| periplasmic solute binding prote... 251 3e-64
gi|169627680|ref|YP_001701329.1| ABC transporter solute-binding ... 221 2e-55
gi|111021451|ref|YP_704423.1| ABC transporter permease [Rhodococ... 207 4e-51
gi|226363817|ref|YP_002781599.1| ABC transporter substrate-bindi... 205 1e-50
gi|229494330|ref|ZP_04388093.1| ABC transporter, permease compon... 195 2e-47
gi|226304192|ref|YP_002764150.1| ABC transporter substrate-bindi... 194 3e-47
gi|325674983|ref|ZP_08154670.1| ABC superfamily ATP binding cass... 193 7e-47
gi|312138113|ref|YP_004005449.1| ABC transporter substrate-bindi... 192 2e-46
gi|54022409|ref|YP_116651.1| putative periplasmic solute-binding... 162 2e-37
gi|256374507|ref|YP_003098167.1| periplasmic solute binding prot... 159 9e-37
gi|258655030|ref|YP_003204186.1| periplasmic solute binding prot... 158 3e-36
gi|294633133|ref|ZP_06711692.1| solute binding protein [Streptom... 156 1e-35
gi|300790504|ref|YP_003770795.1| metal ABC transporter periplasm... 154 3e-35
gi|296138345|ref|YP_003645588.1| periplasmic solute binding prot... 152 1e-34
gi|163840144|ref|YP_001624549.1| ABC transporter, solute binding... 152 1e-34
gi|262200982|ref|YP_003272190.1| periplasmic solute-binding prot... 151 3e-34
gi|343925939|ref|ZP_08765454.1| putative ABC transporter substra... 150 5e-34
gi|313836979|gb|EFS74693.1| periplasmic solute binding family pr... 150 5e-34
gi|329767062|ref|ZP_08258590.1| hypothetical protein HMPREF0428_... 150 8e-34
gi|328906833|gb|EGG26599.1| periplasmic solute binding family pr... 149 9e-34
gi|50955929|ref|YP_063217.1| ABC transporter, solute binding pro... 149 2e-33
gi|68146495|emb|CAH10181.1| ChaT2 protein [Streptomyces chartreu... 147 4e-33
gi|331699811|ref|YP_004336050.1| metal ion ABC transporter perip... 147 5e-33
gi|328956104|ref|YP_004373437.1| periplasmic solute binding prot... 144 3e-32
gi|241889874|ref|ZP_04777172.1| ABC-type metal ion transport sys... 144 4e-32
gi|314986695|gb|EFT30787.1| periplasmic solute binding family pr... 144 5e-32
gi|255327058|ref|ZP_05368134.1| ABC transporter, solute binding ... 144 5e-32
gi|313791605|gb|EFS39723.1| periplasmic solute binding family pr... 143 6e-32
gi|313763950|gb|EFS35314.1| periplasmic solute binding family pr... 143 6e-32
gi|313828087|gb|EFS65801.1| periplasmic solute binding family pr... 143 6e-32
>gi|15609196|ref|NP_216575.1| hypothetical protein Rv2059 [Mycobacterium tuberculosis H37Rv]
gi|15841548|ref|NP_336585.1| hypothetical protein MT2119 [Mycobacterium tuberculosis CDC1551]
gi|31793242|ref|NP_855735.1| hypothetical protein Mb2085 [Mycobacterium bovis AF2122/97]
47 more sequence titles
Length=511
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/511 (99%), Positives = 511/511 (100%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|253798884|ref|YP_003031885.1| hypothetical protein TBMG_01922 [Mycobacterium tuberculosis KZN
1435]
gi|289554157|ref|ZP_06443367.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|313658957|ref|ZP_07815837.1| hypothetical protein MtubKV_11071 [Mycobacterium tuberculosis
KZN V2475]
gi|253320387|gb|ACT24990.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289438789|gb|EFD21282.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|328458641|gb|AEB04064.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=511
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/511 (99%), Positives = 511/511 (100%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPW+DQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWIDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|289745988|ref|ZP_06505366.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289686516|gb|EFD54004.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=511
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/511 (99%), Positives = 510/511 (99%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPD HPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDQHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|326903672|gb|EGE50605.1| hypothetical protein TBPG_01551 [Mycobacterium tuberculosis W-148]
Length=511
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/511 (99%), Positives = 509/511 (99%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPD HPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDQHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQ PTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQKPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|344219885|gb|AEN00516.1| hypothetical protein MTCTRI2_2097 [Mycobacterium tuberculosis
CTRI-2]
Length=511
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/511 (99%), Positives = 510/511 (99%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPW+DQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWIDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDD APNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDAAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|289758179|ref|ZP_06517557.1| adhesion protein [Mycobacterium tuberculosis T85]
gi|289713743|gb|EFD77755.1| adhesion protein [Mycobacterium tuberculosis T85]
Length=511
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/511 (99%), Positives = 508/511 (99%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPD HPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDQHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSL GAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLFGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQ PTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQKPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|340627070|ref|YP_004745522.1| hypothetical protein MCAN_20821 [Mycobacterium canettii CIPT
140010059]
gi|340005260|emb|CCC44414.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=511
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/511 (99%), Positives = 510/511 (99%), Gaps = 0/511 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRR DPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRDDPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPDHHPRRLPRCP+LRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDHHPRRLPRCPILRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITE+TETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITEVTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRS+RADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSIRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV 480
Query 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 481 GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
>gi|289745334|ref|ZP_06504712.1| adhesion protein [Mycobacterium tuberculosis 02_1987]
gi|289685862|gb|EFD53350.1| adhesion protein [Mycobacterium tuberculosis 02_1987]
Length=475
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%)
Query 1 VATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
+ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR
Sbjct 1 MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR 60
Query 61 ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
ASMKSAIHPD HPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG
Sbjct 61 ASMKSAIHPDQHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG 120
Query 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD
Sbjct 121 GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD 180
Query 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA
Sbjct 181 AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA 240
Query 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL
Sbjct 241 IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL 300
Query 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR
Sbjct 301 DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR 360
Query 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS
Sbjct 361 RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS 420
Query 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGA 475
RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGA
Sbjct 421 RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGA 475
>gi|308375768|ref|ZP_07445030.2| hypothetical protein TMGG_00614 [Mycobacterium tuberculosis SUMu007]
gi|308345236|gb|EFP34087.1| hypothetical protein TMGG_00614 [Mycobacterium tuberculosis SUMu007]
Length=421
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/421 (100%), Positives = 421/421 (100%), Gaps = 0/421 (0%)
Query 91 MIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIV 150
MIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIV
Sbjct 1 MIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIV 60
Query 151 DAELVIYNGGGYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAA 210
DAELVIYNGGGYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAA
Sbjct 61 DAELVIYNGGGYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAA 120
Query 211 TIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAA 270
TIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAA
Sbjct 121 TIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAA 180
Query 271 AGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAAR 330
AGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAAR
Sbjct 181 AGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAAR 240
Query 331 RAGVPITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALV 390
RAGVPITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALV
Sbjct 241 RAGVPITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALV 300
Query 391 CHRRSGGRGRPRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCP 450
CHRRSGGRGRPRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCP
Sbjct 301 CHRRSGGRGRPRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCP 360
Query 451 GRRDRDLGGLRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRP 510
GRRDRDLGGLRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRP
Sbjct 361 GRRDRDLGGLRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRP 420
Query 511 L 511
L
Sbjct 421 L 421
>gi|308232019|ref|ZP_07414634.2| hypothetical protein TMAG_02242 [Mycobacterium tuberculosis SUMu001]
gi|308377906|ref|ZP_07480846.2| hypothetical protein TMIG_00724 [Mycobacterium tuberculosis SUMu009]
gi|308403401|ref|ZP_07493811.2| hypothetical protein TMLG_03550 [Mycobacterium tuberculosis SUMu012]
gi|308215252|gb|EFO74651.1| hypothetical protein TMAG_02242 [Mycobacterium tuberculosis SUMu001]
gi|308354168|gb|EFP43019.1| hypothetical protein TMIG_00724 [Mycobacterium tuberculosis SUMu009]
gi|308365725|gb|EFP54576.1| hypothetical protein TMLG_03550 [Mycobacterium tuberculosis SUMu012]
Length=416
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/416 (100%), Positives = 416/416 (100%), Gaps = 0/416 (0%)
Query 96 MVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELV 155
MVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELV
Sbjct 1 MVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELV 60
Query 156 IYNGGGYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADR 215
IYNGGGYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADR
Sbjct 61 IYNGGGYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADR 120
Query 216 LADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKN 275
LADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKN
Sbjct 121 LADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKN 180
Query 276 RTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVP 335
RTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVP
Sbjct 181 RTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVP 240
Query 336 ITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRS 395
ITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRS
Sbjct 241 ITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRS 300
Query 396 GGRGRPRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDR 455
GGRGRPRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDR
Sbjct 301 GGRGRPRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDR 360
Query 456 DLGGLRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
DLGGLRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 361 DLGGLRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 416
>gi|167966864|ref|ZP_02549141.1| hypothetical protein MtubH3_01885 [Mycobacterium tuberculosis
H37Ra]
gi|308374482|ref|ZP_07436213.2| hypothetical protein TMFG_01014 [Mycobacterium tuberculosis SUMu006]
gi|308341750|gb|EFP30601.1| hypothetical protein TMFG_01014 [Mycobacterium tuberculosis SUMu006]
Length=402
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/402 (99%), Positives = 402/402 (100%), Gaps = 0/402 (0%)
Query 110 VWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV 169
+WGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV
Sbjct 1 MWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV 60
Query 170 LAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRA 229
LAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRA
Sbjct 61 LAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRA 120
Query 230 NAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGN 289
NAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGN
Sbjct 121 NAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGN 180
Query 290 DPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDR 349
DPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDR
Sbjct 181 DPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDR 240
Query 350 DQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG 409
DQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG
Sbjct 241 DQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG 300
Query 410 NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRH 469
NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRH
Sbjct 301 NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRH 360
Query 470 PAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
PAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 361 PAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 402
>gi|339294984|gb|AEJ47095.1| hypothetical protein CCDC5079_1905 [Mycobacterium tuberculosis
CCDC5079]
gi|339298608|gb|AEJ50718.1| hypothetical protein CCDC5180_1881 [Mycobacterium tuberculosis
CCDC5180]
Length=402
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/402 (99%), Positives = 401/402 (99%), Gaps = 0/402 (0%)
Query 110 VWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV 169
+WGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV
Sbjct 1 MWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV 60
Query 170 LAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRA 229
LAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRA
Sbjct 61 LAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRA 120
Query 230 NAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGN 289
NAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGN
Sbjct 121 NAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGN 180
Query 290 DPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDR 349
DPTPADMAAVLDMIAGREVAALLVNPQ PTAATDELQVAARRAGVPITELTETLPSGTDR
Sbjct 181 DPTPADMAAVLDMIAGREVAALLVNPQKPTAATDELQVAARRAGVPITELTETLPSGTDR 240
Query 350 DQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG 409
DQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG
Sbjct 241 DQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG 300
Query 410 NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRH 469
NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRH
Sbjct 301 NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRH 360
Query 470 PAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 511
PAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sbjct 361 PAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL 402
>gi|296166625|ref|ZP_06849053.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898028|gb|EFG77606.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=312
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/240 (67%), Positives = 194/240 (81%), Gaps = 1/240 (0%)
Query 110 VWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQV 169
VWGSVA A+ G H+ V SILTG DPHSY ASP+DAAAI DA LV+YNGGGYDPWV+QV
Sbjct 49 VWGSVASAIAGRHITVNSILTGGDTDPHSYAASPSDAAAIADATLVVYNGGGYDPWVEQV 108
Query 170 LAGHPGVQAVDAYSLL-GAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYR 228
LAGHPGV+++ AYS L AV NEHVFYD +VAK+VA IA+R++ +DP+++ +YR
Sbjct 109 LAGHPGVKSIGAYSYLRPAVPGGQPANEHVFYDLDVAKSVAFAIAERMSAIDPAHAADYR 168
Query 229 ANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENG 288
NAAEF RGADA+ ISEHAIA+ YP VIATEPV +YLLAA+GL +RTP+TF AANEN
Sbjct 169 GNAAEFCRGADAVVISEHAIASAYPGTGVIATEPVGYYLLAASGLIDRTPSTFTAANENE 228
Query 289 NDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTD 348
DP+P+DMA VLD+IA R+VAALL+NPQT TAA + L+ AARRAGVP+T ++ETLP GTD
Sbjct 229 TDPSPSDMAFVLDLIARRQVAALLINPQTSTAAINALRDAARRAGVPVTNVSETLPVGTD 288
>gi|183985039|ref|YP_001853330.1| hypothetical protein MMAR_5071 [Mycobacterium marinum M]
gi|183178365|gb|ACC43475.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=302
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/263 (65%), Positives = 195/263 (75%), Gaps = 15/263 (5%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV GGH+ VKSILTGA +DPHSYQASP DAA I D+ L+IYNGGGYDPWVD
Sbjct 44 DVWGSVARAVAGGHLAVKSILTGAASDPHSYQASPVDAAMIADSSLLIYNGGGYDPWVDN 103
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDA---PNEHVFYDPNVAKAVAATIADRLADLDPSNSG 225
VLA HP + A+DAYSLLG DA P+EHVFY+ +VAK+VAATIA+RLA +DP+++
Sbjct 104 VLANHPAINAIDAYSLLGT----DAARPPDEHVFYNLHVAKSVAATIAERLAIIDPAHAA 159
Query 226 NYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAAN 285
YR NA EF R ADAI SE AI +P VIATEPVVHYLLAA+GL NRTPA F AN
Sbjct 160 EYRTNAVEFGRNADAIVDSERAIGAEHPAVGVIATEPVVHYLLAASGLVNRTPAAFAQAN 219
Query 286 ENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPS 345
EN +DP PAD+A+VL +I REVAALLVNPQT TA T LQ AA RAGVP+ E++ET+P
Sbjct 220 ENDSDPAPADLASVLTLIDRREVAALLVNPQTATATTAGLQAAAHRAGVPVAEVSETMPI 279
Query 346 GTDR--------DQFCAADRPDR 360
TD DQ AA R R
Sbjct 280 DTDYLTWQRNTVDQLAAALRSGR 302
>gi|15827093|ref|NP_301356.1| periplasmic solute-binding proteins [Mycobacterium leprae TN]
gi|221229571|ref|YP_002502987.1| putative periplasmic solute-binding proteins [Mycobacterium leprae
Br4923]
gi|13092641|emb|CAC29845.1| putative periplasmic solute-binding proteins [Mycobacterium leprae]
gi|219932678|emb|CAR70430.1| putative periplasmic solute-binding proteins [Mycobacterium leprae
Br4923]
Length=302
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/265 (61%), Positives = 198/265 (75%), Gaps = 10/265 (3%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVAR + G HV V SI+TGAH DPH+Y+ +PA+ AAI DA LV+YNGGGYDPWVD+
Sbjct 38 DVWGSVARIIAGRHVAVTSIVTGAHTDPHTYRVNPAETAAITDAALVVYNGGGYDPWVDK 97
Query 169 VLAGHPGVQAVDAYSLLGAVG--DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
VLAG P +++VDAYSLL + G + +EHVFYD N+AK+VA+ IAD+L +DP N+ +
Sbjct 98 VLAGRPDIKSVDAYSLLASRGATTEGPADEHVFYDLNIAKSVASLIADQLVTIDPDNAAD 157
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
Y+ANA EF R ADAIAISEHAIA+ YP A VI TEPVVHYLL A+GL NRTP F A +E
Sbjct 158 YQANATEFCRSADAIAISEHAIASDYPAAGVIVTEPVVHYLLQASGLVNRTPPAFTATHE 217
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
N NDP+ ADMAA L++I R+V+ALLVNPQ AAT+ LQ AARR+GVP+TE+TE LP+
Sbjct 218 NENDPSAADMAAALNLINHRQVSALLVNPQKSNAATNGLQAAARRSGVPVTEVTEMLPND 277
Query 347 TDR--------DQFCAADRPDRRGR 363
TD DQ A + +R R
Sbjct 278 TDYLTWQRNTIDQLLTALQSNRSPR 302
>gi|118619326|ref|YP_907658.1| hypothetical protein MUL_4147 [Mycobacterium ulcerans Agy99]
gi|118571436|gb|ABL06187.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=301
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/263 (65%), Positives = 194/263 (74%), Gaps = 15/263 (5%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV GGH+ VKSILTGA +DPHSYQASP DAA I D+ L+IYNGGGYDPWVD
Sbjct 43 DVWGSVARAVAGGHLAVKSILTGAASDPHSYQASPVDAAMIADSSLLIYNGGGYDPWVDN 102
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDA---PNEHVFYDPNVAKAVAATIADRLADLDPSNSG 225
VLA HP + A+DAY LLG DA P+EHVFY+ +VAK+VAATIA+RLA +DP+++
Sbjct 103 VLANHPAINAIDAYPLLGT----DAARPPDEHVFYNLHVAKSVAATIAERLAIIDPAHAA 158
Query 226 NYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAAN 285
YR NA EF R ADAI SE AI +P VIATEPVVHYLLAA+GL NRTPA F AN
Sbjct 159 EYRTNAVEFGRNADAIGDSERAIGAEHPAVGVIATEPVVHYLLAASGLVNRTPAAFAQAN 218
Query 286 ENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPS 345
EN +DP PAD+A+VL +I REVAALLVNPQT TA T LQ AA RAGVP+ E++ET+P
Sbjct 219 ENDSDPAPADLASVLTLIDRREVAALLVNPQTATATTAGLQAAAHRAGVPVAEVSETMPI 278
Query 346 GTDR--------DQFCAADRPDR 360
TD DQ AA R R
Sbjct 279 DTDYLTWQRNTVDQLAAALRSGR 301
>gi|342862408|ref|ZP_08719048.1| periplasmic solute binding protein family protein [Mycobacterium
colombiense CECT 3035]
gi|342130079|gb|EGT83413.1| periplasmic solute binding protein family protein [Mycobacterium
colombiense CECT 3035]
Length=311
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/241 (69%), Positives = 185/241 (77%), Gaps = 5/241 (2%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV G HV VKSIL+GA DPHSY+ SPADAAAI DA LV++NGGGYD WVD
Sbjct 51 DVWGSVARAVAGSHVTVKSILSGADVDPHSYEVSPADAAAIADAPLVVFNGGGYDGWVDD 110
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAP-NEHVFYDPNVAKAVAATIADRLADLDPSNSGNY 227
VLA HP + VDAYS L D P NEHVFYD VAKAVAATIADRLA +DP N +Y
Sbjct 111 VLARHPDAKPVDAYSFL----DGGQPRNEHVFYDLTVAKAVAATIADRLAAIDPGNGADY 166
Query 228 RANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANEN 287
RANAA F R AD+IA EHAIATT+P+ +VIATEPV YLL A+GL NRTP TF AA EN
Sbjct 167 RANAAAFGREADSIAGVEHAIATTHPNTSVIATEPVAFYLLKASGLINRTPPTFEAAIEN 226
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGT 347
DP PADMAAVLD++ R+VAA+LVNPQT T A + L+ AAR AGVP+T++ ETL GT
Sbjct 227 ETDPAPADMAAVLDLVNRRQVAAVLVNPQTSTTAVNGLRDAARHAGVPVTDVAETLSDGT 286
Query 348 D 348
D
Sbjct 287 D 287
>gi|254822722|ref|ZP_05227723.1| hypothetical protein MintA_22524 [Mycobacterium intracellulare
ATCC 13950]
Length=315
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/241 (66%), Positives = 184/241 (77%), Gaps = 4/241 (1%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV G HV VKSIL+GA DPHSY+ASP+DAAAI DA LV+YNGGGYD WVD
Sbjct 54 DVWGSVARAVAGSHVAVKSILSGAETDPHSYEASPSDAAAIADAALVVYNGGGYDGWVDD 113
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAP-NEHVFYDPNVAKAVAATIADRLADLDPSNSGNY 227
VLA PG + V+AYS L +D P NEHVFYD +VAKAVAATIADRLA +DP N+ +Y
Sbjct 114 VLARQPGARPVNAYSFLE---NDGQPRNEHVFYDLSVAKAVAATIADRLATIDPGNAADY 170
Query 228 RANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANEN 287
RA+AA F R ADAIA +EH IA YP +V+ATEPV YLL A GL NRTP +F AA EN
Sbjct 171 RASAATFGRRADAIAGTEHGIAAAYPHTSVVATEPVAFYLLKATGLLNRTPPSFAAAIEN 230
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGT 347
DP PAD+A+VLD+I +V+AL+VNPQT AA L+ AARRAGVP+TE+ ETLP G
Sbjct 231 ETDPAPADLASVLDLIDRAQVSALVVNPQTSAAAITSLRDAARRAGVPVTEVAETLPDGA 290
Query 348 D 348
D
Sbjct 291 D 291
>gi|41406587|ref|NP_959423.1| hypothetical protein MAP0489c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394936|gb|AAS02806.1| hypothetical protein MAP_0489c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458483|gb|EGO37456.1| ABC-type metal ion transport system, periplasmic component/surface
adhesin [Mycobacterium avium subsp. paratuberculosis S397]
Length=311
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/241 (64%), Positives = 178/241 (74%), Gaps = 4/241 (1%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV GGHV V SIL+G+ DPHSY+ASP+DAAAI DA LV++NGGGYD WVD
Sbjct 50 DVWGSVARAVAGGHVAVASILSGSDQDPHSYEASPSDAAAIADAGLVVFNGGGYDGWVDD 109
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAP-NEHVFYDPNVAKAVAATIADRLADLDPSNSGNY 227
VLA HPGV VDAY+LL DD P NEHVFY VAKAVAA +ADRLA +DP N+ +Y
Sbjct 110 VLAHHPGVARVDAYALLP---DDGRPRNEHVFYHLGVAKAVAAAVADRLAAIDPGNAADY 166
Query 228 RANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANEN 287
R NAA F R ADAIA EH IA +P +V+ATEPV YLL A+GL NRTP AA EN
Sbjct 167 RRNAAAFGRDADAIAGIEHTIAAAHPGGSVVATEPVAFYLLEASGLVNRTPPALEAAVEN 226
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGT 347
DP PAD+A LD++ +V+AL+VNPQT +A + L+ AARRAGVP+ E+ ETLP G
Sbjct 227 ETDPAPADLARALDLLDRHQVSALVVNPQTSASAVNGLREAARRAGVPVVEVRETLPDGA 286
Query 348 D 348
D
Sbjct 287 D 287
>gi|118463328|ref|YP_879863.1| periplasmic solute binding protein family protein [Mycobacterium
avium 104]
gi|118164615|gb|ABK65512.1| periplasmic solute binding protein family protein [Mycobacterium
avium 104]
Length=311
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/240 (63%), Positives = 177/240 (74%), Gaps = 2/240 (0%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV GGHV V SIL+G+ DPHSY+ASP+DAAAI DA LV++NGGGYD WVD
Sbjct 50 DVWGSVARAVAGGHVAVASILSGSDQDPHSYEASPSDAAAIADAGLVVFNGGGYDGWVDD 109
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYR 228
VLA HPGV VDAY+LL G NEHVFY VAKAVAA +ADRLA +DP N+ +YR
Sbjct 110 VLAHHPGVARVDAYALLPDAGRPR--NEHVFYHLGVAKAVAAAVADRLAAIDPGNAADYR 167
Query 229 ANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENG 288
NAA F R ADAIA EH IA +P +V+ATEPV YLL A+GL NRTP AA EN
Sbjct 168 RNAAAFGRDADAIAGIEHTIAAAHPGGSVVATEPVAFYLLEASGLVNRTPPALEAAVENE 227
Query 289 NDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTD 348
DP PAD+A LD++ R+V+AL+VNPQT +A + L+ AARRAGVP+ E+ ETLP G D
Sbjct 228 TDPAPADLARALDLLDRRQVSALVVNPQTSASAVNGLREAARRAGVPVVEVRETLPDGAD 287
>gi|254773541|ref|ZP_05215057.1| periplasmic solute binding protein family protein [Mycobacterium
avium subsp. avium ATCC 25291]
Length=324
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/240 (63%), Positives = 176/240 (74%), Gaps = 2/240 (0%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVARAV GGHV V SIL+G+ DPHSY+ASP+DAAAI DA LV++NGGGYD WVD
Sbjct 63 DVWGSVARAVAGGHVAVASILSGSDQDPHSYEASPSDAAAIADAGLVVFNGGGYDGWVDD 122
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYR 228
VLA HPGV VDAY+LL G NEHVFY VAKAVAA +ADRLA +DP N+ +YR
Sbjct 123 VLAHHPGVARVDAYALLPDAGRPR--NEHVFYHLGVAKAVAAAVADRLAAIDPGNAADYR 180
Query 229 ANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENG 288
NAA F R ADAIA EH IA +P +V+ATEPV YLL A+GL NRTP AA EN
Sbjct 181 RNAAAFGRDADAIAGIEHTIAAAHPGGSVVATEPVAFYLLEASGLVNRTPPALEAAVENE 240
Query 289 NDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTD 348
DP PAD+A LD++ +V+AL+VNPQT +A + L+ AARRAGVP+ E+ ETLP G D
Sbjct 241 TDPAPADLARALDLLDRHQVSALVVNPQTSASAVNGLREAARRAGVPVVEVRETLPDGAD 300
>gi|169627680|ref|YP_001701329.1| ABC transporter solute-binding protein [Mycobacterium abscessus
ATCC 19977]
gi|169239647|emb|CAM60675.1| Putative ABC transporter solute binding protein [Mycobacterium
abscessus]
Length=292
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/241 (49%), Positives = 160/241 (67%), Gaps = 6/241 (2%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
D W SVA+AVTG H V ++++GA DPHS++ +PA AA + DA LV+YNG GYDP++D+
Sbjct 40 DAWASVAQAVTGDHAKVSALVSGADTDPHSFEVTPAAAAQVQDATLVVYNGDGYDPFIDK 99
Query 169 VLA-GHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNY 227
+L G P V +AY LL A D NEHVFY A+ VA +AD LA DP N+ +Y
Sbjct 100 LLKDGEPRV---NAYQLLPA--DSADKNEHVFYSLRTAQQVANNVADDLAKADPGNADSY 154
Query 228 RANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANEN 287
ANA F + D+IA + +AT Y A++ATEPV +L++ GL +RTP F A E
Sbjct 155 HANAKTFGQQLDSIASLQEDVATKYRGKAILATEPVASHLVSRCGLVDRTPHAFAEAAEQ 214
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGT 347
G DP+PAD+A+ LD+I+ ++VAALL NPQT + T+ ++ AA GVP+ +TETLP GT
Sbjct 215 GQDPSPADVASALDLISTKQVAALLFNPQTAGSVTNRIKQAAESHGVPVVTVTETLPEGT 274
Query 348 D 348
D
Sbjct 275 D 275
>gi|111021451|ref|YP_704423.1| ABC transporter permease [Rhodococcus jostii RHA1]
gi|110820981|gb|ABG96265.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
Length=322
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/266 (44%), Positives = 162/266 (61%), Gaps = 22/266 (8%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+AV G V V SI+T +DPHS++ASP DAA + DA L++YNGGGYD +VD
Sbjct 44 NVWGSVAQAVAGDKVDVTSIITEPSSDPHSFEASPTDAAKLTDASLIVYNGGGYDHFVDD 103
Query 169 VL-AGHPGVQAVDAYSLL--GA-VGDDDAP------------------NEHVFYDPNVAK 206
++ G+ V+A+ LL GA G+D+ NEHV++D +
Sbjct 104 IIGTGNSDQLTVNAFDLLEGGAHAGEDEHSGGDSDGGDSHEGHDHGDVNEHVWFDVDTVD 163
Query 207 AVAATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHY 266
A A +IAD+L LDP N+ Y+ANAA F + I+ IA + DA V TEP+ +Y
Sbjct 164 ATAQSIADKLGQLDPDNADAYKANAATFHGQLEQISAITDGIAAAHKDAPVAQTEPIAYY 223
Query 267 LLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQ 326
LL +AGLK+ TP F +A ENGNDP PA +AA ++ G++V AL+ N QT T +++
Sbjct 224 LLQSAGLKDVTPPDFTSAIENGNDPAPAAIAATRQLLTGKQVQALVYNVQTQDRVTQDVR 283
Query 327 VAARRAGVPITELTETLPSGTDRDQF 352
A AG+P+ E+TETLP G D Q+
Sbjct 284 ATAESAGIPVVEVTETLPEGLDYIQW 309
>gi|226363817|ref|YP_002781599.1| ABC transporter substrate-binding protein [Rhodococcus opacus
B4]
gi|226242306|dbj|BAH52654.1| putative ABC transporter substrate-binding protein [Rhodococcus
opacus B4]
Length=329
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/264 (44%), Positives = 161/264 (61%), Gaps = 20/264 (7%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+AV G V V SI+T +DPHS++A+P DAA + DA L++YNGGGYD +VD
Sbjct 53 NVWGSVAQAVAGDKVDVTSIITEPSSDPHSFEATPTDAAKLTDASLIVYNGGGYDHFVDD 112
Query 169 VL-AGHPGVQAVDAYSLL--GAVGDDDA-----------------PNEHVFYDPNVAKAV 208
++ G+ V+A+ LL GA +++ NEHV++D + A
Sbjct 113 IIGTGNSDQLTVNAFDLLEGGAHANEEEHSGEGDSHEGHDHDHGDVNEHVWFDVDTVDAT 172
Query 209 AATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLL 268
A +IAD+L LDP N+ Y+ANAA F + I+ IA +P A V TEP+ +YLL
Sbjct 173 AQSIADKLGQLDPDNADAYKANAATFHGRLEQISAITDGIAAAHPGAPVAQTEPIAYYLL 232
Query 269 AAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVA 328
+AGLK+ TP F +A ENGNDP PA +AA ++ G++V AL+ N QT T +++
Sbjct 233 QSAGLKDVTPPDFTSAIENGNDPAPAAIAATRQLLTGKQVQALVYNVQTQDRVTQDVRAT 292
Query 329 ARRAGVPITELTETLPSGTDRDQF 352
A AG+P+ E+TETLP G D Q+
Sbjct 293 AESAGIPVVEVTETLPEGLDYIQW 316
>gi|229494330|ref|ZP_04388093.1| ABC transporter, permease component [Rhodococcus erythropolis
SK121]
gi|229318692|gb|EEN84550.1| ABC transporter, permease component [Rhodococcus erythropolis
SK121]
Length=316
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/258 (44%), Positives = 157/258 (61%), Gaps = 14/258 (5%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWG VA+AV G + V SI+ ADPHS++A+PADAA I DA LV+YNGGGYD ++
Sbjct 44 NVWGDVAQAVAGDKLTVTSIINEPSADPHSFEATPADAAKITDASLVVYNGGGYDQFITD 103
Query 169 VL-AGHPGVQAVDAYSLLG-------AVGDDD------APNEHVFYDPNVAKAVAATIAD 214
VL AG + V+AY+LL A G+ A NEHV++D AVA ++AD
Sbjct 104 VLDAGKGEQKTVNAYNLLDGGIHAGEAAGESHDGHTHGAVNEHVWFDIPTVDAVAHSVAD 163
Query 215 RLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLK 274
+L+ LDP N+ Y NA +S+ + +IA + A V TEP+ HYLL AA LK
Sbjct 164 QLSALDPDNAATYEDNAKAYSQKLAGVTAITDSIAAAHAGAPVAQTEPIAHYLLVAAELK 223
Query 275 NRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGV 334
+ TP F +A E+GNDP+PA +AA +++ ++ AL+ N QT T +++ A AGV
Sbjct 224 DATPEEFTSAIEDGNDPSPAAIAATRQLLSEKQARALVYNIQTQDKVTQDMRTTAETAGV 283
Query 335 PITELTETLPSGTDRDQF 352
P+ E+TETLP G D Q+
Sbjct 284 PVVEVTETLPEGLDYIQW 301
>gi|226304192|ref|YP_002764150.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis
PR4]
gi|226183307|dbj|BAH31411.1| putative ABC transporter substrate-binding protein [Rhodococcus
erythropolis PR4]
Length=316
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/258 (44%), Positives = 155/258 (61%), Gaps = 14/258 (5%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWG VA+AV G + V SI+ ADPHS++A+PADAA I DA LV+YNGGGYD ++
Sbjct 44 NVWGDVAQAVAGDKLTVTSIINEPSADPHSFEATPADAAKITDASLVVYNGGGYDQFITD 103
Query 169 VL-AGHPGVQAVDAYSLL------GAVGDDD-------APNEHVFYDPNVAKAVAATIAD 214
VL AG + V+AY+LL G + A NEHV++D AVA ++AD
Sbjct 104 VLDAGKGEQKTVNAYNLLDGGIHAGETAGESHDGHTHGAVNEHVWFDIPTVDAVAHSVAD 163
Query 215 RLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLK 274
+L+ LDP N+ Y NA +S+ + +IA + A TEP+ HYLL AA LK
Sbjct 164 QLSALDPDNAATYEDNAKAYSQKLAGVTAITDSIAAAHAGAPAAQTEPIAHYLLVAAELK 223
Query 275 NRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGV 334
+ TP F +A E+GNDP+PA +AA +++ ++ AL+ N QT T +++ A AGV
Sbjct 224 DATPEEFTSAIEDGNDPSPAAIAATRQLLSEKQARALVYNIQTQDKVTQDMRTTAETAGV 283
Query 335 PITELTETLPSGTDRDQF 352
P+ E+TETLP G D Q+
Sbjct 284 PVVEVTETLPEGLDYIQW 301
>gi|325674983|ref|ZP_08154670.1| ABC superfamily ATP binding cassette transporter, binding protein
[Rhodococcus equi ATCC 33707]
gi|325554569|gb|EGD24244.1| ABC superfamily ATP binding cassette transporter, binding protein
[Rhodococcus equi ATCC 33707]
Length=317
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/261 (45%), Positives = 149/261 (58%), Gaps = 14/261 (5%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+AV G + V SI+T ADPHSY+ASPADAA I DA LV+ NGGGYD +V+
Sbjct 44 NVWGSVAQAVAGDRLEVTSIVTEPSADPHSYEASPADAAKITDASLVVLNGGGYDQFVED 103
Query 169 VLAGHPGVQAVDAYSLL----GAVGDDDAP----------NEHVFYDPNVAKAVAATIAD 214
VL AVDA+ L G + A NEHV+YD A A IA
Sbjct 104 VLKSAGDKPAVDAFDLYEERTGTHATESAEEHAGHSHGSVNEHVWYDMPTVDATADAIAV 163
Query 215 RLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLK 274
L LDP + Y NAA F ++ + IA + DA + TEP+ HYLL AA LK
Sbjct 164 ELGKLDPDGADVYNRNAAAFRDRLRQVSETTAGIAAAHRDAPIAQTEPIAHYLLQAASLK 223
Query 275 NRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGV 334
+ TPA F +A ENG DP+PA +A ++A ++V L+ N QT T+ ++ A AG+
Sbjct 224 DVTPAAFTSAVENGTDPSPASIAETRQLLADKKVRVLVYNSQTVDKVTENIRENAENAGI 283
Query 335 PITELTETLPSGTDRDQFCAA 355
P+ E+TETLP G D Q+ A
Sbjct 284 PVVEVTETLPEGMDFVQWQTA 304
>gi|312138113|ref|YP_004005449.1| ABC transporter substrate-binding protein [Rhodococcus equi 103S]
gi|311887452|emb|CBH46764.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus
equi 103S]
Length=319
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/261 (44%), Positives = 148/261 (57%), Gaps = 14/261 (5%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+AV G + V SI+T ADPHSY+ASPADAA I DA LV+ NGGGYD +V+
Sbjct 46 NVWGSVAQAVAGDRLEVTSIVTEPSADPHSYEASPADAAKITDASLVVLNGGGYDQFVED 105
Query 169 VLAGHPGVQAVDAYSLL----GAVGDDDAP----------NEHVFYDPNVAKAVAATIAD 214
VL AVDA+ L G + NEHV+YD A A IA
Sbjct 106 VLKSAGDKPAVDAFDLYEERTGTHATESVEEHAGHSHGSVNEHVWYDMPTVDATADAIAV 165
Query 215 RLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLK 274
L LDP + Y NAA F ++ + IA + DA + TEP+ HYLL AA LK
Sbjct 166 ELGKLDPEGADVYNRNAAAFRDRLRQVSETTAGIAAAHRDAPIAQTEPIAHYLLQAASLK 225
Query 275 NRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGV 334
+ TPA F +A ENG DP+PA +A ++A ++V L+ N QT T+ ++ A AG+
Sbjct 226 DVTPAAFTSAVENGTDPSPASIAETRQLLADKKVRVLVYNSQTVDKVTENIRENAENAGI 285
Query 335 PITELTETLPSGTDRDQFCAA 355
P+ E+TETLP G D Q+ A
Sbjct 286 PVVEVTETLPEGMDFVQWQTA 306
>gi|54022409|ref|YP_116651.1| putative periplasmic solute-binding proteins [Nocardia farcinica
IFM 10152]
gi|54013917|dbj|BAD55287.1| putative periplasmic solute-binding proteins [Nocardia farcinica
IFM 10152]
Length=330
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/276 (39%), Positives = 148/276 (54%), Gaps = 36/276 (13%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWG +A AV G V S+++ ADPHSY+ + AA + DA+L++YNGG YD ++D+
Sbjct 46 NVWGDIAAAVAGPDAEVSSLISDPAADPHSYEVTAVQAAELSDADLIVYNGGHYDEFIDK 105
Query 169 VLAGHPGVQAVDAYSLLG-----------AVGDDDAP------------------NEHVF 199
+ G + V+A + G A GD A NEHV+
Sbjct 106 AIGG-KNKRTVNAVEIAGGGADEHGHDHGAEGDAQAAPADGHDHGNHEHDAHEHDNEHVW 164
Query 200 YDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFS---RGADAIAISEHAIATTYPDAA 256
YD +VA VA IAD L +LDP + Y AA F+ G DA+ IA +P+
Sbjct 165 YDTHVAGEVAERIADSLGELDPDHRQAYADRAAAFTARLAGIDAVV---DRIAAEHPNQP 221
Query 257 VIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQ 316
V+ TEP+ YL+ AA +RTP F A E G DP+PA +AAV D+I ++V AL+ N Q
Sbjct 222 VVQTEPLAQYLVLAAKADDRTPHEFQEAIEQGTDPSPAAVAAVRDLITTKQVRALIYNVQ 281
Query 317 TPTAATDELQVAARRAGVPITELTETLPSGTDRDQF 352
T T +++ A AG+ + E+TETLP G D Q+
Sbjct 282 TEDKITKDIRALADTAGIAVVEVTETLPEGLDYIQW 317
>gi|256374507|ref|YP_003098167.1| periplasmic solute binding protein [Actinosynnema mirum DSM 43827]
gi|255918810|gb|ACU34321.1| periplasmic solute binding protein [Actinosynnema mirum DSM 43827]
Length=296
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/239 (41%), Positives = 137/239 (58%), Gaps = 10/239 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSV +AV G V VK+++ ADPHS+++ PAD AA+ DA+LV+ NGGGYD + D+
Sbjct 45 NVWGSVVKAVGGDAVQVKALIDDPSADPHSFESKPADIAAVADAKLVVGNGGGYDDFFDK 104
Query 169 VLAGHP-GVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNY 227
++ + VDA++L G NEHV+YD + VA +A+ L+ + P +
Sbjct 105 IVDESARSAKRVDAFALSG-----KEENEHVWYDLATVRKVADKVAEELSAIAPDKKDAF 159
Query 228 RANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANEN 287
AA+F D + A A A V+ TEPV YLL AG+++ TPA F A EN
Sbjct 160 TKGAADFGTALDGLT----AKAERIKPAKVVVTEPVPAYLLETAGVEDLTPAEFTEAIEN 215
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
D A +AA D+I ++V AL+ N QT A T +L A AG+P+ +TETLP G
Sbjct 216 ETDVPVAAIAATGDLIVNKQVNALINNTQTENAVTGDLVAKAGTAGLPVVGMTETLPEG 274
>gi|258655030|ref|YP_003204186.1| periplasmic solute binding protein [Nakamurella multipartita
DSM 44233]
gi|258558255|gb|ACV81197.1| periplasmic solute binding protein [Nakamurella multipartita
DSM 44233]
Length=316
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/250 (40%), Positives = 137/250 (55%), Gaps = 10/250 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWG V + + G V V SI++ +ADPHS+Q+SP + A+ A+L++ NGGGYD ++
Sbjct 58 NVWGDVVKQIGGDRVEVTSIISDPNADPHSFQSSPRNQLALSSAQLIVENGGGYDDFMQT 117
Query 169 VLAGH----PGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNS 224
++A P + AVDA G D NEHV+YD VA IA LA +DP+N+
Sbjct 118 MVASAGTQAPVITAVDAS---GVTPQDGELNEHVWYDLPGTIKVADAIAGELATIDPANA 174
Query 225 GNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAA 284
Y+AN+A F + + + AI + A V TEPV YLL AGLKN TP F A
Sbjct 175 STYQANSATFDQAVNDLITQAEAIKAGHDGAPVAITEPVPVYLLETAGLKNVTPPEFSEA 234
Query 285 NENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLP 344
EN D + M L + G++V L N QT T+++ AA+ GVP +TETLP
Sbjct 235 IENETDVPASVMNETLALFTGQQVKLLAYNEQTTGPQTEQVLEAAKTNGVPTVPVTETLP 294
Query 345 SGTDRDQFCA 354
DR + +
Sbjct 295 ---DRQDYLS 301
>gi|294633133|ref|ZP_06711692.1| solute binding protein [Streptomyces sp. e14]
gi|292830914|gb|EFF89264.1| solute binding protein [Streptomyces sp. e14]
Length=304
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/254 (38%), Positives = 139/254 (55%), Gaps = 11/254 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWG +A+ V G V V SI+T DPHS++AS + + +A LVI NGGGYD +V +
Sbjct 46 NVWGDIAQQVGGDKVTVTSIITNPDQDPHSFEASTRNQLTLSEARLVIENGGGYDDFVSR 105
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAP-----NEHVFYD-PNVAKAVAATIADRLADLDPS 222
+ +P +DA + G AP NEHV+YD P+V K VA IA+ L + P
Sbjct 106 MTKSNPSAAKIDAVEVSG----HKAPAGGELNEHVWYDVPSVEK-VADRIAEELGKVSPE 160
Query 223 NSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFI 282
++ + NA F+ + E I + V TEPV Y+ AAGL+N+TP F
Sbjct 161 DAATFEKNAETFTAKLQPLTAKEADIKKNHAGDGVAITEPVPLYMTEAAGLENKTPEEFS 220
Query 283 AANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTET 342
A E G+D +P + L + + +V L+ N QT A T ++ AA++AGVP+ +TET
Sbjct 221 EAIEEGDDVSPQVLRTTLGLFSSHQVKVLVYNNQTAGAQTQKVLDAAKKAGVPVVPVTET 280
Query 343 LPSGTDRDQFCAAD 356
LP+G D + A+
Sbjct 281 LPAGKDYLSWMTAN 294
>gi|300790504|ref|YP_003770795.1| metal ABC transporter periplasmic protein [Amycolatopsis mediterranei
U32]
gi|299800018|gb|ADJ50393.1| periplasmic substrate-binding component of ABC-type metal ion
transport system [Amycolatopsis mediterranei U32]
gi|340532189|gb|AEK47394.1| metal ABC transporter periplasmic protein [Amycolatopsis mediterranei
S699]
Length=304
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/240 (43%), Positives = 141/240 (59%), Gaps = 8/240 (3%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DVWGSVA AV G +V VKSI+ ADPHSY+ + DA A A+L++ NGGGYD + +
Sbjct 51 DVWGSVAGAVGGENVEVKSIIHDPSADPHSYETTADDALAAKGAQLLLSNGGGYDEFFGK 110
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYD-PNVAKAVAATIADRLADLDPSNSGNY 227
+ + + AY + A GD+ NEHV+YD P V K VA +A +L +L P+ +
Sbjct 111 LTEQAGSAKKLVAYDI-AAPGDE---NEHVWYDLPGVGK-VADQLAAQLGELKPAAKQRF 165
Query 228 RANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANEN 287
NA F DA+ + TT+P V+ TEPV HYLLA+A + + TP F A EN
Sbjct 166 ADNATAFKVKVDALEKRLEELGTTHPGTKVVVTEPVAHYLLASAKITDATPKAFSDAVEN 225
Query 288 GNDPTPAD-MAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
D PAD ++A +IA ++V AL+ N QT T T ++ A+ AG+ + ++TETLP G
Sbjct 226 DTD-VPADAVSAYKQLIATKQVKALINNAQTVTPLTQDVVGQAKAAGIGVVDVTETLPQG 284
>gi|296138345|ref|YP_003645588.1| periplasmic solute binding protein [Tsukamurella paurometabola
DSM 20162]
gi|296026479|gb|ADG77249.1| periplasmic solute binding protein [Tsukamurella paurometabola
DSM 20162]
Length=298
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/240 (41%), Positives = 138/240 (58%), Gaps = 5/240 (2%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DV+G+VA+AV G H V S+ + DPH ++ S D A+ A +++YNGG YD ++++
Sbjct 43 DVYGAVAKAVAGDHATVTSLFSNPTGDPHEFEPSAQDTLAVKRAAVIVYNGGHYDAYIEK 102
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYR 228
G G + VDA S G+ NEHVFYD + VA IA L+ D +N+ +Y
Sbjct 103 AAEGATGAK-VDAVSQQEPRGE----NEHVFYDLPTIQKVATAIAKALSAKDSANTTDYE 157
Query 229 ANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENG 288
A AA F+ D + I P A V ATEPV YLL AGL + TP + AA E+G
Sbjct 158 AKAAAFNSRLDVVIDRAREIGRANPGAKVAATEPVAGYLLTLAGLTDATPPRYTAAIESG 217
Query 289 NDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTD 348
DP PAD+AA ++ G++V A+++N QT + T +A+ AGVP+ +TE+LP G D
Sbjct 218 TDPAPADIAAATALVTGKQVRAVILNAQTESPVTTAFATSAQSAGVPVVRITESLPEGVD 277
>gi|163840144|ref|YP_001624549.1| ABC transporter, solute binding protein [Renibacterium salmoninarum
ATCC 33209]
gi|162953620|gb|ABY23135.1| ABC transporter, solute binding protein [Renibacterium salmoninarum
ATCC 33209]
Length=315
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/243 (38%), Positives = 134/243 (56%), Gaps = 4/243 (1%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+V+GS+ + G V V SI+ DPHSY +SP D A+ A L+I NGGGYD + +
Sbjct 57 NVYGSIVSKIGGDRVKVTSIIANTSQDPHSYDSSPQDKLAVSKAGLLIENGGGYDDFFTK 116
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAP--NEHVFYD-PNVAKAVAATIADRLADLDPSNSG 225
+ G + +D L G +++ NEHV+Y P +AK +A T+A++L LD +++
Sbjct 117 LTDGIDKSKLIDVVDLSGLKTAENSADFNEHVWYSLPTIAK-LADTVAEKLGALDSAHAA 175
Query 226 NYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAAN 285
++ ANAA+F I + + TT V TEPV ++L +AGL N+TP + A
Sbjct 176 DFTANAAKFKTSLADIETTLAGVKTTANGQPVAITEPVPLWMLQSAGLVNKTPEAYSHAI 235
Query 286 ENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPS 345
E G+D PA + D+I+ + V L N QT T L+ AA AGVP+ TETLP
Sbjct 236 EEGSDVPPAVLKETTDLISSKSVKFLAYNDQTEGPQTKSLKAAAETAGVPVVNFTETLPE 295
Query 346 GTD 348
G D
Sbjct 296 GQD 298
>gi|262200982|ref|YP_003272190.1| periplasmic solute-binding protein [Gordonia bronchialis DSM
43247]
gi|262084329|gb|ACY20297.1| periplasmic solute binding protein [Gordonia bronchialis DSM
43247]
Length=312
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/265 (41%), Positives = 143/265 (54%), Gaps = 17/265 (6%)
Query 98 GRPSGPGE----RKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAE 153
G SG G+ +VWGSVA AV G V ++ T A DPH ++ S AD A+IVDA+
Sbjct 25 GSDSGDGKPTVVTSTNVWGSVAAAVAGDKATVTALYTNADGDPHEFEPSAADTASIVDAD 84
Query 154 LVIYNGGGYDPWVDQVLAGHPGVQAVDAYSLLG---------AVG---DDDAPNEHVFYD 201
+V+ NGGGYD ++++ AG V+A+SLLG G D NEHVFYD
Sbjct 85 VVVLNGGGYDAYMEKASAGTDSA-VVNAFSLLGHGDGTEHDHESGHHHDHGVINEHVFYD 143
Query 202 PNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATE 261
V VA IA L + D +N+ Y+ANAA F+ + AI T + V TE
Sbjct 144 LAVVAQVADKIAAALGEKDSANADAYKANAAAFTGQITTLRDKLAAIKTAHDGTKVAQTE 203
Query 262 PVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAA 321
P+ YLL AGL + +PA F + E GN P AD+AA+ D++ R V A + N Q A
Sbjct 204 PLAGYLLTEAGLVDASPAGFTQSVEEGNSPAAADIAAMQDLLKNRTVRAFIYNTQAVDAV 263
Query 322 TDELQVAARRAGVPITELTETLPSG 346
T ++ A AGVP+ TETLP G
Sbjct 264 TKQMLPIAEGAGVPVLRFTETLPDG 288
>gi|343925939|ref|ZP_08765454.1| putative ABC transporter substrate-binding protein [Gordonia
alkanivorans NBRC 16433]
gi|343764290|dbj|GAA12380.1| putative ABC transporter substrate-binding protein [Gordonia
alkanivorans NBRC 16433]
Length=322
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/263 (40%), Positives = 134/263 (51%), Gaps = 29/263 (11%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWG+VA AV G V S+ T DPH ++ S AD A I DA++++ NGG YD +++Q
Sbjct 40 NVWGAVASAVAGDKATVASVYTSTEGDPHEFEPSAADTATIADADILVMNGGHYDAYMEQ 99
Query 169 VLAGHPGVQAVDAYSLL-------------------------GAVGDDDAPNEHVFYDPN 203
A G VDAY+L GD+ NEHVFYD
Sbjct 100 A-AKSSGATVVDAYALTRSDDHDAHDHDADGQSADDHADHADHDHGDE---NEHVFYDLP 155
Query 204 VAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPV 263
V VA +AD LA+ DP N+G YRANA F+ G D + +I + V TEP+
Sbjct 156 VVAEVADKVADALAEQDPENAGTYRANAETFTTGIDELRAEVASIRKAHDGTKVAQTEPL 215
Query 264 VHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATD 323
YLL AGL + PA F A E G P+ AD AA+ D++A R A L+ N Q T
Sbjct 216 AGYLLTEAGLIDAAPAGFTQAVEEGQSPSAADRAAMQDLLASRGAAVLIYNVQAVDPVTQ 275
Query 324 ELQVAARRAGVPITELTETLPSG 346
+ A+ A VP+ E TETLP G
Sbjct 276 AMLDVAKSAKVPVVEFTETLPDG 298
>gi|313836979|gb|EFS74693.1| periplasmic solute binding family protein [Propionibacterium
acnes HL037PA2]
gi|314929431|gb|EFS93262.1| periplasmic solute binding family protein [Propionibacterium
acnes HL044PA1]
gi|314971485|gb|EFT15583.1| periplasmic solute binding family protein [Propionibacterium
acnes HL037PA3]
Length=324
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/270 (35%), Positives = 134/270 (50%), Gaps = 13/270 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGS+A+A+ V V SI+ DPH Y+A+ D A A +VI NGGGYD W +
Sbjct 65 NVWGSIAQAIGRDKVNVDSIIDSPDQDPHDYEATAKDKLAFSKARIVIANGGGYDDWATK 124
Query 169 VLAGHPGVQA--VDAYSLLGAVG-DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSG 225
L G +A +DA G NEHVFY + A+ VA + L P N
Sbjct 125 -LVKSSGSKADFIDAVKTSGLKKPGQKEFNEHVFYSIDSARKVAKVVESDLVKASPDNKS 183
Query 226 NYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAAN 285
+ N +F D + + +P++ IATEPVV YLL +KN TP F+ +
Sbjct 184 TFETNLKDFESKLDGLKTRAIKVGERHPNSTAIATEPVVGYLLEDMKIKNITPDEFVEQS 243
Query 286 ENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPS 345
E P+ + +I+ ++ + LLVN QT T LQ AA+ AG+P T + ET P
Sbjct 244 ETEAGPSTKVVHETTSLISDKKASILLVNGQTSDDVTKILQKAAQNAGIPQTGVWETFPK 303
Query 346 GTDRDQFCAADRPDRRGRSLRADHADRGLS 375
G D + PD G+++ D D+GL+
Sbjct 304 GVD-------NYPDFIGKAI--DSIDKGLA 324
>gi|329767062|ref|ZP_08258590.1| hypothetical protein HMPREF0428_00287 [Gemella haemolysans M341]
gi|328837787|gb|EGF87412.1| hypothetical protein HMPREF0428_00287 [Gemella haemolysans M341]
Length=347
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/292 (30%), Positives = 135/292 (47%), Gaps = 21/292 (7%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+ + VA+++ G V SI+T DPH ++ + DA A+ DA + I NGGGYD W ++
Sbjct 43 NFYAEVAKSIAGDKAEVSSIITSTSVDPHDFEPTAQDAKAVADANIAILNGGGYDSWFEK 102
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYR 228
+ A ++ +D LLG D NEH++Y+P V VA + L++ D SN Y
Sbjct 103 LTANSKDIKKIDGAKLLGL---KDGDNEHIWYNPEVMSKVADELTKVLSEKDSSNKDFYE 159
Query 229 ANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIA-ANEN 287
N + + I +++ +V+ TEPV Y + A G K +A A E
Sbjct 160 KNRDNYKKELSKITDKINSLKEKANGKSVLTTEPVFEYAVDALGFKTSDQVKKLAQATEE 219
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGT 347
GNDP P D+ A+ + I ++++ ++ N QT + L A + VP+ +TET P G
Sbjct 220 GNDPAPQDLKAIQEQIKSKQISLIINNVQTTNKTIEGLISLAEQNKVPVLNVTETQPDGK 279
Query 348 DR-----DQFCAADRPDRRGRSLRA------------DHADRGLSARGHRVG 382
DQ+ + G +A DH G S GH G
Sbjct 280 TYIEWMLDQYNKLEEILNGGSGEKAYHVEGADEGHSHDHGHEGHSHEGHSHG 331
>gi|328906833|gb|EGG26599.1| periplasmic solute binding family protein [Propionibacterium
humerusii P08]
Length=305
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/270 (35%), Positives = 134/270 (50%), Gaps = 13/270 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGS+A+A+ V V SI+ DPH Y+A+ D A A +VI NGGGYD W +
Sbjct 46 NVWGSIAQAIGRDKVNVDSIIDSPDQDPHDYEATAKDKLAFSKARIVIANGGGYDDWATK 105
Query 169 VLAGHPGVQA--VDAYSLLGAVG-DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSG 225
L G +A +DA G NEHVFY + A+ VA + L P N
Sbjct 106 -LVKSSGSKADFIDAVKTSGLKKPGQKEFNEHVFYSIDSARKVAKVVESDLVKASPDNKS 164
Query 226 NYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAAN 285
+ N +F D + + +P++ IATEPVV YLL +KN TP F+ +
Sbjct 165 TFETNLKDFESKLDGLKTRAIKVGERHPNSTAIATEPVVGYLLEDMKIKNITPDEFVEQS 224
Query 286 ENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPS 345
E P+ + +I+ ++ + LLVN QT T LQ AA+ AG+P T + ET P
Sbjct 225 ETEAGPSTKVVHETTSLISDKKASILLVNGQTSDDVTKILQKAAQNAGIPQTGVWETFPK 284
Query 346 GTDRDQFCAADRPDRRGRSLRADHADRGLS 375
G D + PD G+++ D D+GL+
Sbjct 285 GVD-------NYPDFIGKAI--DSIDKGLA 305
>gi|50955929|ref|YP_063217.1| ABC transporter, solute binding protein [Leifsonia xyli subsp.
xyli str. CTCB07]
gi|50952411|gb|AAT90112.1| ABC transporter, solute binding protein [Leifsonia xyli subsp.
xyli str. CTCB07]
Length=298
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/242 (35%), Positives = 126/242 (53%), Gaps = 2/242 (0%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+V+G +A + G V + S++T DPHS++AS A+ AE++I NGGGYD ++++
Sbjct 39 NVYGDIAAKIAGSTVEITSLMTDPAQDPHSFEASAQSQLAVSKAEILIENGGGYDDFMEK 98
Query 169 VLAGHPG--VQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
+ G V ++ L G D NEHV+YD + ++ + L+ DP
Sbjct 99 LRNGAKNHDVAVLNVVDLSGKKPVDGELNEHVWYDFPTIEKLSTALVSALSKADPGQKAT 158
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
+ NA F + + TY V TEPV YLL A GL+N+TP F A E
Sbjct 159 FEKNAETFRGTVAELENRTAELKATYTGQGVAITEPVPLYLLQAMGLQNKTPEKFSEAIE 218
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
G+D +P + LD+ +GR V L N QT T+ + AA++ G+P+ +TETLPSG
Sbjct 219 EGSDVSPLVLQQTLDLFSGRSVKLLAYNEQTSGPETESVLAAAKQVGIPVVPVTETLPSG 278
Query 347 TD 348
D
Sbjct 279 KD 280
>gi|68146495|emb|CAH10181.1| ChaT2 protein [Streptomyces chartreusis]
Length=308
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/253 (38%), Positives = 141/253 (56%), Gaps = 8/253 (3%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+V+G +AR + G V V SI++ DPHSY+AS + A+ AE+VI NGGGYD +VD+
Sbjct 49 NVYGDLARRIGGAKVQVTSIISDPDQDPHSYEASTRNQLALSKAEIVIENGGGYDDFVDR 108
Query 169 VL---AGHPGVQAVDAYSLLGAVGDDDAP-NEHVFYD-PNVAKAVAATIADRLADLDPSN 223
+L PGV ++A + G NEHV+YD P VA+ +A IA L DP++
Sbjct 109 MLKSAGSSPGV--INAVEVSGKTAPKGGELNEHVWYDFPTVAE-LADRIAIALGKADPAD 165
Query 224 SGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIA 283
+ + NA +F + E I + AV TEPV Y++ A+GL+N TP F
Sbjct 166 AATFTENAKDFVSLLQPLERKEARIKAEHGGEAVAITEPVPLYMIEASGLRNATPEEFSE 225
Query 284 ANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETL 343
A E G+D +P + + L + G++V AL+ N QT T++ + A AG+P+ +TETL
Sbjct 226 AIEEGDDVSPRTLQSTLALFTGKKVEALVYNEQTSGPQTEKAERVAEAAGIPVVPVTETL 285
Query 344 PSGTDRDQFCAAD 356
P G D + A+
Sbjct 286 PKGKDYLAWMTAN 298
>gi|331699811|ref|YP_004336050.1| metal ion ABC transporter periplasmic subunit [Pseudonocardia
dioxanivorans CB1190]
gi|326954500|gb|AEA28197.1| ABC-type metal ion transporter, periplasmic subunit [Pseudonocardia
dioxanivorans CB1190]
Length=308
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/243 (42%), Positives = 140/243 (58%), Gaps = 4/243 (1%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DV+GS+ RAV G HV V SI+ DPH Y+ +PADA A+ A LV+ NG GYD + +
Sbjct 47 DVYGSIVRAVGGDHVDVTSIIDDPAKDPHEYETTPADALAVSKAALVVVNGAGYDDFATK 106
Query 169 VL-AGHPGVQAVDAYSLLG---AVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNS 224
++ A +D L G V + NEHV+Y+ K +A +A L +D +++
Sbjct 107 LVDAAESKPTTIDVAQLSGLQQQVPAGEEFNEHVWYNLPTMKRLATELAADLGRIDAADA 166
Query 225 GNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAA 284
Y ANAA FS+ D + + A+ + + AAV TEPV YLL AAGL+N TP F A
Sbjct 167 ATYTANAAAFSQRIDGLTAALDAVKSRHDGAAVAITEPVPLYLLEAAGLRNVTPEKFSEA 226
Query 285 NENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLP 344
E GNDP A + L + R V AL+ N QT + +T +++ AA AG+P+ +TETLP
Sbjct 227 AEEGNDPPAAVLQETLALFRDRSVKALVSNAQTESPSTTQVEQAATAAGIPVVRVTETLP 286
Query 345 SGT 347
+GT
Sbjct 287 AGT 289
>gi|328956104|ref|YP_004373437.1| periplasmic solute binding protein [Coriobacterium glomerans
PW2]
gi|328456428|gb|AEB07622.1| periplasmic solute binding protein [Coriobacterium glomerans
PW2]
Length=326
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/250 (34%), Positives = 134/250 (54%), Gaps = 4/250 (1%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+ +G VAR + G V S+++ ADPH+++ +P+DA I A +V+ NG YD W+D+
Sbjct 61 NTYGDVARQIGGSFADVTSVISDPGADPHNFEITPSDAKIISQALIVVENGLSYDDWMDK 120
Query 169 VLAGHPGVQ--AVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
+LA V + A +L DD N H++YDP VA T+A L DP ++
Sbjct 121 MLASSERVDRTIISAQKVLKL--PDDTQNPHLWYDPATMPQVAKTMAAALKKHDPDHASE 178
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
Y N FS + + + + YP A+ ATEPV +Y+LAAAG+ +TP + AA
Sbjct 179 YDKNLKTFSSSVERYRSALADLGSQYPAASAAATEPVANYMLAAAGVTIKTPWSLQAAIM 238
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
N DP+ D+ + + +++ R+V + N Q ++ T + AA+ GVP+ + ET+P
Sbjct 239 NDQDPSAQDIGSQMKLLSDRQVDFFVYNEQVTSSLTKKFLDAAKEGGVPVVAVYETMPEH 298
Query 347 TDRDQFCAAD 356
D + A+
Sbjct 299 HDYASWMLAE 308
>gi|241889874|ref|ZP_04777172.1| ABC-type metal ion transport system, periplasmic component/surface
adhesin [Gemella haemolysans ATCC 10379]
gi|241863496|gb|EER67880.1| ABC-type metal ion transport system, periplasmic component/surface
adhesin [Gemella haemolysans ATCC 10379]
Length=344
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/269 (29%), Positives = 129/269 (48%), Gaps = 9/269 (3%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+ + VA+++ G V SI+T DPH ++ + DA + D+ + I NGGGYD W ++
Sbjct 43 NFYAEVAKSIAGDKADVSSIITSTSVDPHDFEPTAQDAKTVADSNIAILNGGGYDSWFEK 102
Query 169 VLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYR 228
+ A ++ +D LLG D NEH++Y+P V VA + L++ D N Y
Sbjct 103 LTANSKDIKKIDGAKLLGL---KDGDNEHIWYNPEVMSKVADELTKVLSEKDSVNKVFYE 159
Query 229 ANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIA-ANEN 287
N + + I +++ +V+ TEPV Y + + GLK +A A E
Sbjct 160 KNRDNYKKELSKITDKINSLKDKANGKSVLTTEPVFEYAVESLGLKTTDQVKKLAQATEE 219
Query 288 GNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGT 347
GNDP P D+ A+ + I ++++ ++ N QT + L A + VP+ +TET P G
Sbjct 220 GNDPAPQDLKAIQEQIKSKQISLIINNVQTTNKTIEGLITLAEQNKVPVLNVTETQPEGK 279
Query 348 DR-----DQFCAADRPDRRGRSLRADHAD 371
DQ+ + G +A H +
Sbjct 280 TYIEWMLDQYNKLEEILNGGSGEKAYHVE 308
>gi|314986695|gb|EFT30787.1| periplasmic solute binding family protein [Propionibacterium
acnes HL005PA2]
Length=305
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/269 (34%), Positives = 129/269 (48%), Gaps = 11/269 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+A+ G V V SI+ DPH Y+A+ D A A++ I NGGGYD W +
Sbjct 46 NVWGSVAQAIGGDKVNVHSIIDSPDQDPHDYEATAKDKLAFSKAKIAITNGGGYDDWATK 105
Query 169 VL-AGHPGVQAVDAYSLLGAVG-DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
++ + P +DA G D NEHVFY + + VA + L P N
Sbjct 106 LVKSTSPQADFIDAVETSGLKKPGDKEFNEHVFYSIDSVRKVAKVVESDLVKTSPDNKST 165
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
+ N +F + + +P + IATEPV YLL +KN TP F+ +E
Sbjct 166 FETNLKDFESKLTDLKARATKVGKKHPHSTAIATEPVTGYLLEDMKIKNITPDEFVEQSE 225
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
P+ + D++ ++ + LLVN QT T LQ AA +A V + ET P G
Sbjct 226 TEAGPSTKVVHETTDLLTQKKASILLVNGQTSDDVTKALQKAASKANVHEVGVWETFPEG 285
Query 347 TDRDQFCAADRPDRRGRSLRADHADRGLS 375
D + PD G+++ D D+GL+
Sbjct 286 VD-------NYPDFIGKAI--DSIDKGLA 305
>gi|255327058|ref|ZP_05368134.1| ABC transporter, solute binding protein [Rothia mucilaginosa
ATCC 25296]
gi|255296275|gb|EET75616.1| ABC transporter, solute binding protein [Rothia mucilaginosa
ATCC 25296]
Length=335
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/266 (34%), Positives = 137/266 (52%), Gaps = 29/266 (10%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
DV+ +A+ V G ++ V +++ DPHSY+A+ AD DA L++ NG GYD +++
Sbjct 56 DVYADIAKQVGGDYIEVTALIASTSTDPHSYEATSADRLKAKDASLIVINGAGYDLFLED 115
Query 169 VLAG--HPGVQAVDAYSLLGAVGDDDAP------------------------NEHVFYDP 202
LAG + + V+A + G + D + NEH++YD
Sbjct 116 -LAGKDNASQKIVNAVKVSGKLTDAEYTHLVEDHRGGEHHEDGGDHAHAHEFNEHLWYDF 174
Query 203 NVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIATEP 262
K VA IA+ LA LD +++ +R NA+ FS+ DA+ + AIA ++TEP
Sbjct 175 ETMKKVAQKIAEELAGLDSAHAETFRTNASTFSKELDALDTTAKAIAG--EGKKYLSTEP 232
Query 263 VVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAAT 322
V YL+++ G +N TP+ F A E GND + DMI ++V L N QT T+ T
Sbjct 233 VPDYLISSTGAENATPSEFAEAAEAGNDVPALVLKETKDMITEKKVQLLAYNEQTSTSQT 292
Query 323 DELQVAARRAGVPITELTETLPSGTD 348
+E+ AA+ A V TETLP T+
Sbjct 293 NEVLQAAKDASVNYVSFTETLPENTN 318
>gi|313791605|gb|EFS39723.1| periplasmic solute binding family protein [Propionibacterium
acnes HL110PA1]
gi|327455175|gb|EGF01830.1| periplasmic solute binding family protein [Propionibacterium
acnes HL092PA1]
Length=305
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/269 (34%), Positives = 129/269 (48%), Gaps = 11/269 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+A+ G V V SI+ DPH Y+A+ D A A++ I NGGGYD W +
Sbjct 46 NVWGSVAQAIGGDKVNVHSIIDSPDQDPHDYEATAKDKLAFSKAKIAITNGGGYDDWATK 105
Query 169 VL-AGHPGVQAVDAYSLLGAVG-DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
++ + P +DA G D NEHVFY + + VA + L P N
Sbjct 106 LVKSTSPQADFIDAVETSGLKKPGDKEFNEHVFYSIDSVRKVAKVVESDLVKTSPDNKST 165
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
+ N +F + + +P + IATEPV YLL +KN TP F+ +E
Sbjct 166 FETNLKDFESKLTDLKARATKVGKKHPHSTAIATEPVAGYLLEDMKIKNITPDEFVEQSE 225
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
P+ + D++ ++ + LLVN QT T LQ AA +A V + ET P G
Sbjct 226 TEAGPSTKVVHETTDLLTQKKASILLVNGQTSDDVTKALQKAASKANVHEVGVWETFPEG 285
Query 347 TDRDQFCAADRPDRRGRSLRADHADRGLS 375
D + PD G+++ D D+GL+
Sbjct 286 VD-------NYPDFIGKAI--DSIDKGLA 305
>gi|313763950|gb|EFS35314.1| periplasmic solute binding family protein [Propionibacterium
acnes HL013PA1]
gi|314914988|gb|EFS78819.1| periplasmic solute binding family protein [Propionibacterium
acnes HL005PA4]
gi|314918691|gb|EFS82522.1| periplasmic solute binding family protein [Propionibacterium
acnes HL050PA1]
8 more sequence titles
Length=305
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/269 (34%), Positives = 129/269 (48%), Gaps = 11/269 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+A+ G V V SI+ DPH Y+A+ D A A++ I NGGGYD W +
Sbjct 46 NVWGSVAQAIGGDKVNVHSIIDSPDQDPHDYEATAKDKLAFSKAKIAITNGGGYDDWATK 105
Query 169 VL-AGHPGVQAVDAYSLLGAVG-DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
++ + P +DA G D NEHVFY + + VA + L P N
Sbjct 106 LVKSTSPQADFIDAVETSGLKKPGDKEFNEHVFYSIDSVRKVAKVVESDLVKTSPDNKST 165
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
+ N +F + + +P + IATEPV YLL +KN TP F+ +E
Sbjct 166 FETNLKDFESKLTDLKARATKVGKKHPHSTAIATEPVAGYLLEDMKIKNITPDEFVGQSE 225
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
P+ + D++ ++ + LLVN QT T LQ AA +A V + ET P G
Sbjct 226 TEAGPSTKVVHETTDLLTQKKASILLVNGQTSDDVTKALQKAASKANVHEVGVWETFPEG 285
Query 347 TDRDQFCAADRPDRRGRSLRADHADRGLS 375
D + PD G+++ D D+GL+
Sbjct 286 VD-------NYPDFIGKAI--DSIDKGLA 305
>gi|313828087|gb|EFS65801.1| periplasmic solute binding family protein [Propionibacterium
acnes HL063PA2]
gi|314968238|gb|EFT12337.1| periplasmic solute binding family protein [Propionibacterium
acnes HL037PA1]
gi|315108015|gb|EFT79991.1| periplasmic solute binding family protein [Propionibacterium
acnes HL030PA2]
Length=305
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/269 (34%), Positives = 129/269 (48%), Gaps = 11/269 (4%)
Query 109 DVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQ 168
+VWGSVA+A+ G V V SI+ DPH Y+A+ D A A++ I NGGGYD W +
Sbjct 46 NVWGSVAQAIGGDKVNVHSIIDSPDQDPHDYEATAKDKLAFSKAKIAITNGGGYDDWATK 105
Query 169 VL-AGHPGVQAVDAYSLLGAVG-DDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGN 226
++ + P +DA G D NEHVFY + + VA + L P N
Sbjct 106 LVKSTSPQADFIDAVETSGLKKPGDKEFNEHVFYSIDSVRKVAKVVESDLVKTSPDNKST 165
Query 227 YRANAAEFSRGADAIAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANE 286
+ N +F + + +P + IATEPV YLL +KN TP F+ +E
Sbjct 166 FETNLKDFESKLTDLKARATKVGKKHPHSTAIATEPVAGYLLEDMKIKNITPDEFVGQSE 225
Query 287 NGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSG 346
P+ + D++ ++ + LLVN QT T LQ AA +A V + ET P G
Sbjct 226 TEAGPSTKVVHETTDLLTQKKASILLVNGQTSDDVTKALQKAASKANVHEVGVWETFPEG 285
Query 347 TDRDQFCAADRPDRRGRSLRADHADRGLS 375
D + PD G+++ D D+GL+
Sbjct 286 VD-------NYPDFIGKAI--DSIDKGLA 305
Lambda K H
0.320 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1110838387732
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40