BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2060

Length=133
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|289570170|ref|ZP_06450397.1|  conserved membrane protein [Myco...   242    1e-62
gi|15609197|ref|NP_216576.1|  integral membrane protein [Mycobact...   242    2e-62
gi|254822720|ref|ZP_05227721.1|  ABC-type Mn2+/Zn2+ transport sys...   213    6e-54
gi|296166627|ref|ZP_06849055.1|  cation ABC superfamily ATP bindi...   201    3e-50
gi|254773539|ref|ZP_05215055.1|  hypothetical protein MaviaA2_025...   201    4e-50
gi|41406585|ref|NP_959421.1|  hypothetical protein MAP0487c [Myco...   195    1e-48
gi|118462479|ref|YP_879861.1|  Mn2+/Zn2+ ABC transporter permease...   195    2e-48
gi|342862410|ref|ZP_08719050.1|  Mn2+/Zn2+ ABC transporter permea...   187    4e-46
gi|183985041|ref|YP_001853332.1|  permease component of an ABC-ty...   181    4e-44
gi|15827091|ref|NP_301354.1|  ABC-transporter transmembrane prote...   179    1e-43
gi|118619328|ref|YP_907660.1|  permease component of an ABC-type ...   178    3e-43
gi|169627678|ref|YP_001701327.1|  ABC transporter transmembrane p...   172    1e-41
gi|343925937|ref|ZP_08765452.1|  putative ABC transporter permeas...   162    1e-38
gi|312138111|ref|YP_004005447.1|  ABC transporter transmembrane p...   161    3e-38
gi|262200980|ref|YP_003272188.1|  ABC transporter [Gordonia bronc...   160    5e-38
gi|325674985|ref|ZP_08154672.1|  zinc ABC superfamily ATP binding...   160    7e-38
gi|226304190|ref|YP_002764148.1|  ABC transporter permease protei...   157    7e-37
gi|226363815|ref|YP_002781597.1|  ABC transporter permease protei...   155    1e-36
gi|237784962|ref|YP_002905667.1|  ABC transporter permease [Coryn...   155    2e-36
gi|111021449|ref|YP_704421.1|  metal ABC transporter permease [Rh...   155    3e-36
gi|227506342|ref|ZP_03936391.1|  cation ABC superfamily ATP bindi...   149    9e-35
gi|319948864|ref|ZP_08022977.1|  permease component of an ABC-typ...   149    1e-34
gi|296138343|ref|YP_003645586.1|  ABC transporter [Tsukamurella p...   149    1e-34
gi|227502092|ref|ZP_03932141.1|  cation ABC superfamily ATP bindi...   149    2e-34
gi|306836879|ref|ZP_07469835.1|  cation ABC superfamily ATP bindi...   149    2e-34
gi|282854421|ref|ZP_06263758.1|  ABC 3 transport family protein [...   148    3e-34
gi|289425833|ref|ZP_06427587.1|  ABC 3 transport family protein [...   146    9e-34
gi|50842102|ref|YP_055329.1|  ABC-type transporter, permease comp...   146    9e-34
gi|315096553|gb|EFT68529.1|  ABC 3 transport family protein [Prop...   146    1e-33
gi|227834030|ref|YP_002835737.1|  putative ABC transport system, ...   146    1e-33
gi|262183484|ref|ZP_06042905.1|  putative ABC transport system, p...   146    1e-33
gi|313836981|gb|EFS74695.1|  ABC 3 transport family protein [Prop...   145    2e-33
gi|333918325|ref|YP_004491906.1|  metal ion ABC transporter perme...   145    2e-33
gi|335050574|ref|ZP_08543534.1|  ABC 3 transport family protein [...   145    3e-33
gi|340774517|gb|EGR97001.1|  ABC 3 transport family protein [Prop...   145    3e-33
gi|25029070|ref|NP_739124.1|  hypothetical protein CE2514 [Coryne...   144    3e-33
gi|300780480|ref|ZP_07090336.1|  cation ABC superfamily ATP bindi...   144    4e-33
gi|334564028|ref|ZP_08517019.1|  putative ABC transport system, p...   143    8e-33
gi|255325872|ref|ZP_05366964.1|  ABC-type Mn2+/Zn2+ transport sys...   143    9e-33
gi|296118933|ref|ZP_06837506.1|  putative ABC-type Mn2+/Zn2+/Fe2+...   143    1e-32
gi|311740182|ref|ZP_07714014.1|  cation ABC superfamily ATP bindi...   143    1e-32
gi|172041344|ref|YP_001801058.1|  putative ABC transport system, ...   141    4e-32
gi|326383069|ref|ZP_08204758.1|  ABC-3 protein [Gordonia neofelif...   141    4e-32
gi|134097064|ref|YP_001102725.1|  ABC-type transporter, permease ...   140    6e-32
gi|19553829|ref|NP_601831.1|  ABC-type transporter, permease comp...   139    1e-31
gi|145296629|ref|YP_001139450.1|  hypothetical protein cgR_2537 [...   139    1e-31
gi|227489410|ref|ZP_03919726.1|  cation ABC superfamily ATP bindi...   139    2e-31
gi|213965147|ref|ZP_03393345.1|  ABC-type Mn2+/Zn2+ transport sys...   138    3e-31
gi|21325402|dbj|BAC00024.1|  ABC-type transporter, permease compo...   138    3e-31
gi|227541004|ref|ZP_03971053.1|  cation ABC superfamily ATP bindi...   137    7e-31


>gi|289570170|ref|ZP_06450397.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289543924|gb|EFD47572.1| conserved membrane protein [Mycobacterium tuberculosis T17]
Length=148

 Score =  242 bits (618),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG
Sbjct  16   MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  75

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF
Sbjct  76   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  135

Query  121  VIYLICWLLRRRR  133
            VIYLICWLLRRRR
Sbjct  136  VIYLICWLLRRRR  148


>gi|15609197|ref|NP_216576.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
 gi|31793243|ref|NP_855736.1| integral membrane protein [Mycobacterium bovis AF2122/97]
 gi|254551086|ref|ZP_05141533.1| integral membrane protein [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
 13 more sequence titles
 
gi|294996998|ref|ZP_06802689.1| integral membrane protein [Mycobacterium tuberculosis 210]
 gi|297634636|ref|ZP_06952416.1| integral membrane protein [Mycobacterium tuberculosis KZN 4207]
 gi|297731623|ref|ZP_06960741.1| integral membrane protein [Mycobacterium tuberculosis KZN R506]
 gi|313658958|ref|ZP_07815838.1| integral membrane protein [Mycobacterium tuberculosis KZN V2475]
 gi|339632100|ref|YP_004723742.1| hypothetical protein MAF_20750 [Mycobacterium africanum GM041182]
 gi|340627071|ref|YP_004745523.1| putative integral membrane protein [Mycobacterium canettii CIPT 
140010059]
 gi|3261835|emb|CAB10786.1| Possible conserved integral membrane protein [Mycobacterium tuberculosis 
H37Rv]
 gi|31618835|emb|CAD96939.1| Possible conserved integral membrane protein [Mycobacterium bovis 
AF2122/97]
 gi|121493593|emb|CAL72067.1| Probable conserved transmembrane protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|339331456|emb|CCC27145.1| putative conserved integral membrane protein [Mycobacterium africanum 
GM041182]
 gi|340005261|emb|CCC44415.1| putative conserved integral membrane protein [Mycobacterium canettii 
CIPT 140010059]
 gi|341601983|emb|CCC64657.1| probable conserved transmembrane protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
 gi|344219886|gb|AEN00517.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
Length=133

 Score =  242 bits (617),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG
Sbjct  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF
Sbjct  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120

Query  121  VIYLICWLLRRRR  133
            VIYLICWLLRRRR
Sbjct  121  VIYLICWLLRRRR  133


>gi|254822720|ref|ZP_05227721.1| ABC-type Mn2+/Zn2+ transport system, permease component [Mycobacterium 
intracellulare ATCC 13950]
Length=286

 Score =  213 bits (543),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 113/133 (85%), Positives = 125/133 (94%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML +VCLLV+ VLA CYRPLLFATVDP+VAAARGVPV ALGIVFAAL+GVVAAQAVQIVG
Sbjct  150  MLALVCLLVIAVLATCYRPLLFATVDPDVAAARGVPVHALGIVFAALVGVVAAQAVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV +P AA+ TSVVFAEV+AVGGI+LSLAPGVPVSVFVA+ISF
Sbjct  210  ALLVMSLLITPAAAAARVVTSPAAAMLTSVVFAEVAAVGGIVLSLAPGVPVSVFVASISF  269

Query  121  VIYLICWLLRRRR  133
            +IYL+CWL+ RRR
Sbjct  270  LIYLVCWLVGRRR  282


>gi|296166627|ref|ZP_06849055.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898030|gb|EFG77608.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=286

 Score =  201 bits (511),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 111/133 (84%), Positives = 123/133 (93%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML +VC+LV+ V+A CYRPLLFATVDP+VAAARGVPVRALGIVFAAL+GVVAAQAVQIVG
Sbjct  150  MLALVCVLVIAVIATCYRPLLFATVDPDVAAARGVPVRALGIVFAALVGVVAAQAVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV +P AA+  S+VFAEVSAVGGI+LSLAPGVPVSVFVA ISF
Sbjct  210  ALLVMSLLITPAAAAARVVSSPAAAMVASIVFAEVSAVGGIVLSLAPGVPVSVFVAGISF  269

Query  121  VIYLICWLLRRRR  133
            +IYL CWLL RR+
Sbjct  270  LIYLFCWLLGRRQ  282


>gi|254773539|ref|ZP_05215055.1| hypothetical protein MaviaA2_02520 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=286

 Score =  201 bits (510),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 112/133 (85%), Positives = 122/133 (92%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML +VCLLV+ VLA CYRPLLFATVDP+VAAARGVPV ALGIVFAAL+GVVAAQAVQIVG
Sbjct  150  MLALVCLLVIAVLATCYRPLLFATVDPDVAAARGVPVHALGIVFAALVGVVAAQAVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV +P AA+  SV FAEVSA+GGI+LSLAPGVPVSVFVATISF
Sbjct  210  ALLVMSLLITPAAAAARVVSSPGAAMLASVAFAEVSALGGIVLSLAPGVPVSVFVATISF  269

Query  121  VIYLICWLLRRRR  133
            +IYL CWL+ RRR
Sbjct  270  LIYLACWLIGRRR  282


>gi|41406585|ref|NP_959421.1| hypothetical protein MAP0487c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394934|gb|AAS02804.1| hypothetical protein MAP_0487c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458481|gb|EGO37454.1| ABC-type Mn2+/Zn2+ transport system, permease component [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=286

 Score =  195 bits (496),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 112/133 (85%), Positives = 122/133 (92%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML +VCLLV+ VLA CYRPLLFATVDP+VAAARGVPV ALGIVFAAL+GVVAAQAVQIVG
Sbjct  150  MLALVCLLVIAVLATCYRPLLFATVDPDVAAARGVPVHALGIVFAALVGVVAAQAVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV +P AA+  SV FAEVSA+GGI+LSLAPGVPVSVFVATISF
Sbjct  210  ALLVMSLLITPAAAAARVVASPGAAMLASVAFAEVSALGGIVLSLAPGVPVSVFVATISF  269

Query  121  VIYLICWLLRRRR  133
            +IYL CWL+ RRR
Sbjct  270  LIYLACWLIGRRR  282


>gi|118462479|ref|YP_879861.1| Mn2+/Zn2+ ABC transporter permease [Mycobacterium avium 104]
 gi|118163766|gb|ABK64663.1| ABC-type Mn2+/Zn2+ transport system, permease component [Mycobacterium 
avium 104]
Length=286

 Score =  195 bits (496),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 112/133 (85%), Positives = 122/133 (92%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML +VCLLV+ VLA CYRPLLFATVDP+VAAARGVPV ALGIVFAAL+GVVAAQAVQIVG
Sbjct  150  MLALVCLLVIAVLATCYRPLLFATVDPDVAAARGVPVHALGIVFAALVGVVAAQAVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV +P AA+  SV FAEVSA+GGI+LSLAPGVPVSVFVATISF
Sbjct  210  ALLVMSLLITPAAAAARVVASPGAAMLASVAFAEVSALGGIVLSLAPGVPVSVFVATISF  269

Query  121  VIYLICWLLRRRR  133
            +IYL CWL+ RRR
Sbjct  270  LIYLACWLIGRRR  282


>gi|342862410|ref|ZP_08719050.1| Mn2+/Zn2+ ABC transporter permease [Mycobacterium colombiense 
CECT 3035]
 gi|342130081|gb|EGT83415.1| Mn2+/Zn2+ ABC transporter permease [Mycobacterium colombiense 
CECT 3035]
Length=286

 Score =  187 bits (475),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 112/133 (85%), Positives = 125/133 (94%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML +VCLLV+ VLA CYRPLLFATVDP+VAAARGVPV ALGIVFAAL+GVVAAQAVQIVG
Sbjct  150  MLALVCLLVIAVLATCYRPLLFATVDPDVAAARGVPVYALGIVFAALVGVVAAQAVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV +P AA+ TSVVFAEVSAVGG++LSLAPGVPVSVFVA+ISF
Sbjct  210  ALLVMSLLITPAAAAARVVASPAAAMVTSVVFAEVSAVGGLVLSLAPGVPVSVFVASISF  269

Query  121  VIYLICWLLRRRR  133
            +IYL+CW++ RRR
Sbjct  270  LIYLVCWMIGRRR  282


>gi|183985041|ref|YP_001853332.1| permease component of an ABC-type transporter [Mycobacterium 
marinum M]
 gi|183178367|gb|ACC43477.1| permease component of an ABC-type transporter [Mycobacterium 
marinum M]
Length=283

 Score =  181 bits (458),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 115/133 (87%), Positives = 122/133 (92%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML ++C+LVV  LAICYRPLLFATVDPEVAAARGVPVR L IVFAAL+GVVAAQAVQIVG
Sbjct  151  MLALICVLVVAALAICYRPLLFATVDPEVAAARGVPVRTLSIVFAALVGVVAAQAVQIVG  210

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV AP AAI TSVVFAEV+AVGGI+LSLAPGVPVSVFVATISF
Sbjct  211  ALLVMSLLITPAAAAARVVTAPAAAILTSVVFAEVAAVGGIVLSLAPGVPVSVFVATISF  270

Query  121  VIYLICWLLRRRR  133
            +IYLIC LL R R
Sbjct  271  LIYLICRLLGRHR  283


>gi|15827091|ref|NP_301354.1| ABC-transporter transmembrane protein [Mycobacterium leprae TN]
 gi|221229569|ref|YP_002502985.1| putative ABC-transporter transmembrane protein [Mycobacterium 
leprae Br4923]
 gi|13092639|emb|CAC29843.1| putative ABC-transporter transmembrane protein [Mycobacterium 
leprae]
 gi|219932676|emb|CAR70428.1| putative ABC-transporter transmembrane protein [Mycobacterium 
leprae Br4923]
Length=286

 Score =  179 bits (454),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 106/132 (81%), Positives = 119/132 (91%), Gaps = 0/132 (0%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L +VCL V+ VL  CYRPLLFATVDPEVAAA GVPV ALGIVFAAL+G+VAAQAVQ+VGA
Sbjct  151  LALVCLFVIAVLTTCYRPLLFATVDPEVAAACGVPVHALGIVFAALVGLVAAQAVQVVGA  210

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLVMSLLITPAAAAA+VV +PVAA+  +V+FAEVSAVGG++LSLAPGVPVSVFVATISF+
Sbjct  211  LLVMSLLITPAAAAAQVVASPVAAMVAAVIFAEVSAVGGVVLSLAPGVPVSVFVATISFL  270

Query  122  IYLICWLLRRRR  133
            IYL CWLL R R
Sbjct  271  IYLFCWLLGRHR  282


>gi|118619328|ref|YP_907660.1| permease component of an ABC-type transporter [Mycobacterium 
ulcerans Agy99]
 gi|118571438|gb|ABL06189.1| permease component of an ABC-type transporter [Mycobacterium 
ulcerans Agy99]
Length=283

 Score =  178 bits (451),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 113/133 (85%), Positives = 121/133 (91%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML ++C+LVV  LAICYRPLLFATVDPEVAAARGVPVR L IVF AL+GVVAAQAVQIVG
Sbjct  151  MLALICVLVVAALAICYRPLLFATVDPEVAAARGVPVRTLSIVFVALVGVVAAQAVQIVG  210

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARVV AP AAI TSVVFAE++AVGGI+LSLAPGVPVSVFVATISF
Sbjct  211  ALLVMSLLITPAAAAARVVTAPAAAILTSVVFAELAAVGGIVLSLAPGVPVSVFVATISF  270

Query  121  VIYLICWLLRRRR  133
            +IYLIC LL R R
Sbjct  271  LIYLICRLLGRHR  283


>gi|169627678|ref|YP_001701327.1| ABC transporter transmembrane protein [Mycobacterium abscessus 
ATCC 19977]
 gi|169239645|emb|CAM60673.1| Putative ABC-transporter transmembrane protein [Mycobacterium 
abscessus]
Length=276

 Score =  172 bits (436),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 89/121 (74%), Positives = 105/121 (87%), Gaps = 0/121 (0%)

Query  13   LAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPA  72
            LA+ YRP+LFATVDP+VA ARGVPVRALGIVFAAL+G+ AAQ VQIVGALLVMSLLITPA
Sbjct  154  LAVTYRPMLFATVDPDVAEARGVPVRALGIVFAALVGLTAAQGVQIVGALLVMSLLITPA  213

Query  73   AAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWLLRRR  132
            AAAAR+  +P  AIA S+VFAE++A+GGI+LSLAPGVP+SVFV  I+  IYL+C L+ R 
Sbjct  214  AAAARITSSPARAIALSIVFAEIAAIGGIMLSLAPGVPISVFVTMIAVAIYLLCRLVGRY  273

Query  133  R  133
            R
Sbjct  274  R  274


>gi|343925937|ref|ZP_08765452.1| putative ABC transporter permease protein [Gordonia alkanivorans 
NBRC 16433]
 gi|343764288|dbj|GAA12378.1| putative ABC transporter permease protein [Gordonia alkanivorans 
NBRC 16433]
Length=289

 Score =  162 bits (411),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 86/132 (66%), Positives = 105/132 (80%), Gaps = 0/132 (0%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            +T+   +VV VLA+ YRPLLFA+ DP VA A GVPVR L +VFA +MG+ AAQ VQI+GA
Sbjct  153  ITITTAIVVAVLAVIYRPLLFASTDPRVAQAHGVPVRTLSVVFAIIMGLAAAQGVQIIGA  212

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLVMSLLITP AAAARV   P+ A+  SVVFAEV+AVGG+L+SLAP +PVSVFV  ISFV
Sbjct  213  LLVMSLLITPGAAAARVTANPMRALVLSVVFAEVAAVGGLLMSLAPKLPVSVFVTIISFV  272

Query  122  IYLICWLLRRRR  133
            IY++C ++  RR
Sbjct  273  IYVVCRIIGSRR  284


>gi|312138111|ref|YP_004005447.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311887450|emb|CBH46762.1| putative ABC transporter integral membrane subunit [Rhodococcus 
equi 103S]
Length=299

 Score =  161 bits (407),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 89/127 (71%), Positives = 102/127 (81%), Gaps = 2/127 (1%)

Query  9    VVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLL  68
            V+  LA+ YRPLLFA+ DPEVAAARGVPVRAL IVFA L+G+ AA  VQIVGALLVM+LL
Sbjct  158  VLGTLAVIYRPLLFASTDPEVAAARGVPVRALSIVFAVLVGITAALGVQIVGALLVMALL  217

Query  69   ITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWL  128
            ITPAAAA  V   P+ A   +V+FAE++AVGGILLSLAPGVPVS FV TISFVIYL+C  
Sbjct  218  ITPAAAAGHVTANPLKATVLAVLFAELAAVGGILLSLAPGVPVSTFVTTISFVIYLVCRA  277

Query  129  L--RRRR  133
            +   RRR
Sbjct  278  IGASRRR  284


>gi|262200980|ref|YP_003272188.1| ABC transporter [Gordonia bronchialis DSM 43247]
 gi|262084327|gb|ACY20295.1| ABC-3 protein [Gordonia bronchialis DSM 43247]
Length=289

 Score =  160 bits (405),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 83/125 (67%), Positives = 100/125 (80%), Gaps = 0/125 (0%)

Query  9    VVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLL  68
            V+ V+A+ YRPLLFA+ DP VA A GVPVR L +VFA +MG+  AQ VQI+GALLVMSL+
Sbjct  160  VLAVMAVIYRPLLFASTDPRVAQAHGVPVRTLSVVFAIIMGLACAQGVQIIGALLVMSLM  219

Query  69   ITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWL  128
            ITP AAAAR+   P   IA SVVFAEV+AVGG++LSLAP +PVSVFV TISF+IYL C +
Sbjct  220  ITPGAAAARLTANPTKVIALSVVFAEVAAVGGLILSLAPKLPVSVFVTTISFLIYLACRM  279

Query  129  LRRRR  133
            + RRR
Sbjct  280  IGRRR  284


>gi|325674985|ref|ZP_08154672.1| zinc ABC superfamily ATP binding cassette transporter, membrane 
protein [Rhodococcus equi ATCC 33707]
 gi|325554571|gb|EGD24246.1| zinc ABC superfamily ATP binding cassette transporter, membrane 
protein [Rhodococcus equi ATCC 33707]
Length=299

 Score =  160 bits (404),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 88/127 (70%), Positives = 101/127 (80%), Gaps = 2/127 (1%)

Query  9    VVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLL  68
            V+  LA+ YRPLLFA+ DPEVAAARGVPVR L IVFA L+G+ AA  VQIVGALLVM+LL
Sbjct  158  VLGTLAVIYRPLLFASTDPEVAAARGVPVRGLSIVFAVLVGITAALGVQIVGALLVMALL  217

Query  69   ITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWL  128
            ITPAAAA  V   P+ A   +V+FAE++AVGGILLSLAPGVPVS FV TISFVIYL+C  
Sbjct  218  ITPAAAAGHVTANPLKATVLAVLFAELAAVGGILLSLAPGVPVSTFVTTISFVIYLVCRA  277

Query  129  L--RRRR  133
            +   RRR
Sbjct  278  IGASRRR  284


>gi|226304190|ref|YP_002764148.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229494494|ref|ZP_04388257.1| ABC metal ion transporter, permease component [Rhodococcus erythropolis 
SK121]
 gi|226183305|dbj|BAH31409.1| putative ABC transporter permease protein [Rhodococcus erythropolis 
PR4]
 gi|229318856|gb|EEN84714.1| ABC metal ion transporter, permease component [Rhodococcus erythropolis 
SK121]
Length=293

 Score =  157 bits (396),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 92/136 (68%), Positives = 107/136 (79%), Gaps = 3/136 (2%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L +  ++V+  L   YRPLLFA+ DPEVAAARGVPVRAL IVFA L+G+ AA  VQIVG
Sbjct  150  LLLLCAVIVIGTLGFIYRPLLFASTDPEVAAARGVPVRALSIVFAVLVGITAALGVQIVG  209

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAA V  +P+ A   SVVFAE++AVGGILLSLAPGVPVS FV ++SF
Sbjct  210  ALLVMSLLITPAAAAAYVTASPLKATILSVVFAELAAVGGILLSLAPGVPVSSFVTSVSF  269

Query  121  VIYLICWLL---RRRR  133
            VIYLIC L    RR+ 
Sbjct  270  VIYLICRLFGSARRKN  285


>gi|226363815|ref|YP_002781597.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242304|dbj|BAH52652.1| putative ABC transporter permease protein [Rhodococcus opacus 
B4]
Length=297

 Score =  155 bits (393),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 90/129 (70%), Positives = 104/129 (81%), Gaps = 3/129 (2%)

Query  8    LVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSL  67
            LV+ VL + YRPLLFA+ DP+VA ARGVPVRAL IVFA L+G+ AA  VQIVGALLVM+L
Sbjct  157  LVIGVLGLIYRPLLFASTDPDVAEARGVPVRALSIVFAVLVGITAALGVQIVGALLVMAL  216

Query  68   LITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICW  127
            LITPAAAAA V  +P+ A   S+VFAE++AVGGILLSLAPGVPVS FV TISF+IYLIC 
Sbjct  217  LITPAAAAAYVTASPLKATILSIVFAELAAVGGILLSLAPGVPVSSFVTTISFIIYLICR  276

Query  128  L---LRRRR  133
            L    RR+ 
Sbjct  277  LSGSSRRKN  285


>gi|237784962|ref|YP_002905667.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 
44385]
 gi|237757874|gb|ACR17124.1| ABC-type transport system, permease protein [Corynebacterium 
kroppenstedtii DSM 44385]
Length=325

 Score =  155 bits (391),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 84/132 (64%), Positives = 105/132 (80%), Gaps = 0/132 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML  + ++V+  L + +RPLLFA+VDP+VAAA G+P+R + IVFAAL+G+VAAQ VQIVG
Sbjct  145  MLIAITIIVIATLGVLWRPLLFASVDPDVAAASGIPLRTISIVFAALVGLVAAQGVQIVG  204

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLV+SLLITP AAA  V  +P  A+  S +FAEVSAVGG++LSLAPG+PVSVFV TISF
Sbjct  205  ALLVVSLLITPGAAAVHVTASPRKAVLLSTIFAEVSAVGGLVLSLAPGLPVSVFVTTISF  264

Query  121  VIYLICWLLRRR  132
             IYL C L+  R
Sbjct  265  AIYLFCRLIGWR  276


>gi|111021449|ref|YP_704421.1| metal ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110820979|gb|ABG96263.1| ABC metal ion transporter, permease component [Rhodococcus jostii 
RHA1]
Length=297

 Score =  155 bits (391),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 89/126 (71%), Positives = 102/126 (81%), Gaps = 0/126 (0%)

Query  8    LVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSL  67
            LV+ VL + YRPLLFA+ DP+VA ARGVPVRAL IVFA L+G+ AA  VQIVGALLVM+L
Sbjct  157  LVIGVLGLIYRPLLFASTDPDVAEARGVPVRALSIVFAVLVGITAALGVQIVGALLVMAL  216

Query  68   LITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICW  127
            LITPAAAAA V  +P+ A   S+VFAE++AVGGILLSLAPGVPVS FV TISFVIYL+C 
Sbjct  217  LITPAAAAAYVTASPLKATILSIVFAELAAVGGILLSLAPGVPVSSFVTTISFVIYLVCR  276

Query  128  LLRRRR  133
            L    R
Sbjct  277  LSGSSR  282


>gi|227506342|ref|ZP_03936391.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium striatum ATCC 6940]
 gi|227197054|gb|EEI77102.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium striatum ATCC 6940]
Length=321

 Score =  149 bits (377),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 77/136 (57%), Positives = 107/136 (79%), Gaps = 4/136 (2%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L +  +++V ++A+ +RP+LFA+ DP +A A GVPVR + + FA L+G+ AAQ+VQIVG
Sbjct  148  LLALTTVIIVAIVALFWRPMLFASADPVMAQAAGVPVRVISVGFAILVGLTAAQSVQIVG  207

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +PV A+  S +FAEV+AVGG++LSLAPG+PVSVFV TISF
Sbjct  208  SLLVMALLITPGAAAVQITSSPVRAVLWSTIFAEVAAVGGLILSLAPGLPVSVFVTTISF  267

Query  121  VIYLIC----WLLRRR  132
            +IYL+C    WL  RR
Sbjct  268  IIYLVCRLIGWLRNRR  283


>gi|319948864|ref|ZP_08022977.1| permease component of an ABC-type transporter [Dietzia cinnamea 
P4]
 gi|319437466|gb|EFV92473.1| permease component of an ABC-type transporter [Dietzia cinnamea 
P4]
Length=282

 Score =  149 bits (377),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 84/126 (67%), Positives = 103/126 (82%), Gaps = 0/126 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
             + VV  ++   L   YRPL+F++ DPEVAAARGVPVRAL ++FA L+G+ AAQAVQ+VG
Sbjct  149  QMAVVAAIICVALIALYRPLVFSSADPEVAAARGVPVRALNMIFAVLVGLAAAQAVQVVG  208

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLV+SLLITPAAAAA V  +P  AI  +++FAE++AVGG+LLSLAPGVPVSVFV TISF
Sbjct  209  ALLVLSLLITPAAAAAAVTSSPAKAIGLTILFAEIAAVGGMLLSLAPGVPVSVFVTTISF  268

Query  121  VIYLIC  126
            VIYL C
Sbjct  269  VIYLAC  274


>gi|296138343|ref|YP_003645586.1| ABC transporter [Tsukamurella paurometabola DSM 20162]
 gi|296026477|gb|ADG77247.1| ABC-3 protein [Tsukamurella paurometabola DSM 20162]
Length=294

 Score =  149 bits (376),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 79/132 (60%), Positives = 103/132 (79%), Gaps = 0/132 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ++ +  ++V+ +LA  YRPLLF + DP+VAAARGVP + L +VFA L+G  AAQ VQIVG
Sbjct  145  LMAITTVVVLVILAFIYRPLLFLSTDPDVAAARGVPAKTLSVVFAMLVGAAAAQGVQIVG  204

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLITPAAAAARV  +P  A   S+ FA  +AVGGI+LSLAP +PVSVFV +ISF
Sbjct  205  ALLVMSLLITPAAAAARVTSSPGKATLLSLAFAMTAAVGGIVLSLAPALPVSVFVTSISF  264

Query  121  VIYLICWLLRRR  132
            +IY++C ++ +R
Sbjct  265  LIYVVCRIIGQR  276


>gi|227502092|ref|ZP_03932141.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium accolens ATCC 49725]
 gi|227077151|gb|EEI15114.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium accolens ATCC 49725]
Length=299

 Score =  149 bits (375),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 75/133 (57%), Positives = 102/133 (77%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L    +++V  +   +RP+LFA+ DPE+A A GVP RA+ + FA L+G+ AAQ+VQIVG
Sbjct  139  LLAATTVIIVAAVGFLWRPMLFASADPEMARAAGVPTRAISVAFAVLVGLAAAQSVQIVG  198

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +P+ A+  S +FAEVSAVGG +LSLAPG+PVSVFV TISF
Sbjct  199  SLLVMALLITPGAAAVQITSSPLRAVLWSTIFAEVSAVGGFILSLAPGLPVSVFVTTISF  258

Query  121  VIYLICWLLRRRR  133
            VIYL+C  +  R+
Sbjct  259  VIYLVCRFIGWRQ  271


>gi|306836879|ref|ZP_07469835.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium accolens ATCC 49726]
 gi|304567251|gb|EFM42860.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium accolens ATCC 49726]
Length=299

 Score =  149 bits (375),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 75/133 (57%), Positives = 102/133 (77%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L    +++V  +   +RP+LFA+ DPE+A A GVP RA+ + FA L+G+ AAQ+VQIVG
Sbjct  139  LLAATTVIIVAAVGFLWRPMLFASADPEMARAAGVPTRAISVAFAVLVGLAAAQSVQIVG  198

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +P+ A+  S +FAEVSAVGG +LSLAPG+PVSVFV TISF
Sbjct  199  SLLVMALLITPGAAAVQITSSPLRAVLWSTIFAEVSAVGGFILSLAPGLPVSVFVTTISF  258

Query  121  VIYLICWLLRRRR  133
            VIYL+C  +  R+
Sbjct  259  VIYLVCRFIGWRQ  271


>gi|282854421|ref|ZP_06263758.1| ABC 3 transport family protein [Propionibacterium acnes J139]
 gi|282583874|gb|EFB89254.1| ABC 3 transport family protein [Propionibacterium acnes J139]
 gi|314922826|gb|EFS86657.1| ABC 3 transport family protein [Propionibacterium acnes HL001PA1]
 6 more sequence titles
 
gi|314966257|gb|EFT10356.1| ABC 3 transport family protein [Propionibacterium acnes HL082PA2]
 gi|314980783|gb|EFT24877.1| ABC 3 transport family protein [Propionibacterium acnes HL110PA3]
 gi|315090245|gb|EFT62221.1| ABC 3 transport family protein [Propionibacterium acnes HL110PA4]
 gi|315093421|gb|EFT65397.1| ABC 3 transport family protein [Propionibacterium acnes HL060PA1]
 gi|315102976|gb|EFT74952.1| ABC 3 transport family protein [Propionibacterium acnes HL050PA2]
 gi|327327038|gb|EGE68819.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Propionibacterium acnes HL103PA1]
Length=284

 Score =  148 bits (373),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 101/135 (75%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L VV + V   L I +RPL FA+VDPEVA ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVVVAIFVAVCLGIIWRPLFFASVDPEVAKARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA++   P+A    S+VFA VSAVGGI+LSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKITAHPLAMSLLSIVFATVSAVGGIMLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   R+RR
Sbjct  263  IYLVCLGLGTIRQRR  277


>gi|289425833|ref|ZP_06427587.1| ABC 3 transport family protein [Propionibacterium acnes SK187]
 gi|289153776|gb|EFD02483.1| ABC 3 transport family protein [Propionibacterium acnes SK187]
Length=284

 Score =  146 bits (369),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 100/135 (75%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L VV + V   L I +RPL FA+VDPE A ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVVVAIFVAVCLGIVWRPLFFASVDPEAAKARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA+V   P+A    S+VFA VSAVGGI+LSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVGGIMLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   R+RR
Sbjct  263  IYLVCLGLGAIRQRR  277


>gi|50842102|ref|YP_055329.1| ABC-type transporter, permease components [Propionibacterium 
acnes KPA171202]
 gi|289426789|ref|ZP_06428517.1| ABC 3 transport family protein [Propionibacterium acnes J165]
 gi|295130189|ref|YP_003580852.1| ABC 3 transport family protein [Propionibacterium acnes SK137]
 60 more sequence titles
 
gi|335055222|ref|ZP_08548010.1| ABC 3 transport family protein [Propionibacterium sp. 434-HC2]
 gi|50839704|gb|AAT82371.1| ABC-type transporter, permease components [Propionibacterium 
acnes KPA171202]
 gi|289160115|gb|EFD08291.1| ABC 3 transport family protein [Propionibacterium acnes J165]
 gi|291375825|gb|ADD99679.1| ABC 3 transport family protein [Propionibacterium acnes SK137]
 gi|313763952|gb|EFS35316.1| ABC 3 transport family protein [Propionibacterium acnes HL013PA1]
 gi|313771517|gb|EFS37483.1| ABC 3 transport family protein [Propionibacterium acnes HL074PA1]
 gi|313791607|gb|EFS39725.1| ABC 3 transport family protein [Propionibacterium acnes HL110PA1]
 gi|313802308|gb|EFS43534.1| ABC 3 transport family protein [Propionibacterium acnes HL110PA2]
 gi|313808177|gb|EFS46651.1| ABC 3 transport family protein [Propionibacterium acnes HL087PA2]
 gi|313811356|gb|EFS49070.1| ABC 3 transport family protein [Propionibacterium acnes HL083PA1]
 gi|313814921|gb|EFS52635.1| ABC 3 transport family protein [Propionibacterium acnes HL059PA1]
 gi|313818944|gb|EFS56658.1| ABC 3 transport family protein [Propionibacterium acnes HL046PA2]
 gi|313820773|gb|EFS58487.1| ABC 3 transport family protein [Propionibacterium acnes HL036PA1]
 gi|313822462|gb|EFS60176.1| ABC 3 transport family protein [Propionibacterium acnes HL036PA2]
 gi|313825742|gb|EFS63456.1| ABC 3 transport family protein [Propionibacterium acnes HL063PA1]
 gi|313828085|gb|EFS65799.1| ABC 3 transport family protein [Propionibacterium acnes HL063PA2]
 gi|313830890|gb|EFS68604.1| ABC 3 transport family protein [Propionibacterium acnes HL007PA1]
 gi|313833317|gb|EFS71031.1| ABC 3 transport family protein [Propionibacterium acnes HL056PA1]
 gi|313839074|gb|EFS76788.1| ABC 3 transport family protein [Propionibacterium acnes HL086PA1]
 gi|314914990|gb|EFS78821.1| ABC 3 transport family protein [Propionibacterium acnes HL005PA4]
 gi|314918689|gb|EFS82520.1| ABC 3 transport family protein [Propionibacterium acnes HL050PA1]
 gi|314920493|gb|EFS84324.1| ABC 3 transport family protein [Propionibacterium acnes HL050PA3]
 gi|314925688|gb|EFS89519.1| ABC 3 transport family protein [Propionibacterium acnes HL036PA3]
 gi|314932167|gb|EFS95998.1| ABC 3 transport family protein [Propionibacterium acnes HL067PA1]
 gi|314954567|gb|EFS98973.1| ABC 3 transport family protein [Propionibacterium acnes HL027PA1]
 gi|314958634|gb|EFT02736.1| ABC 3 transport family protein [Propionibacterium acnes HL002PA1]
 gi|314959759|gb|EFT03861.1| ABC 3 transport family protein [Propionibacterium acnes HL002PA2]
 gi|314962333|gb|EFT06434.1| ABC 3 transport family protein [Propionibacterium acnes HL082PA1]
 gi|314968236|gb|EFT12335.1| ABC 3 transport family protein [Propionibacterium acnes HL037PA1]
 gi|314973777|gb|EFT17873.1| ABC 3 transport family protein [Propionibacterium acnes HL053PA1]
 gi|314976426|gb|EFT20521.1| ABC 3 transport family protein [Propionibacterium acnes HL045PA1]
 gi|314979142|gb|EFT23236.1| ABC 3 transport family protein [Propionibacterium acnes HL072PA2]
 gi|314983293|gb|EFT27385.1| ABC 3 transport family protein [Propionibacterium acnes HL005PA1]
 gi|314986697|gb|EFT30789.1| ABC 3 transport family protein [Propionibacterium acnes HL005PA2]
 gi|314989440|gb|EFT33531.1| ABC 3 transport family protein [Propionibacterium acnes HL005PA3]
 gi|315077419|gb|EFT49479.1| ABC 3 transport family protein [Propionibacterium acnes HL053PA2]
 gi|315080164|gb|EFT52140.1| ABC 3 transport family protein [Propionibacterium acnes HL078PA1]
 gi|315084045|gb|EFT56021.1| ABC 3 transport family protein [Propionibacterium acnes HL027PA2]
 gi|315085247|gb|EFT57223.1| ABC 3 transport family protein [Propionibacterium acnes HL002PA3]
 gi|315089136|gb|EFT61112.1| ABC 3 transport family protein [Propionibacterium acnes HL072PA1]
 gi|315098959|gb|EFT70935.1| ABC 3 transport family protein [Propionibacterium acnes HL059PA2]
 gi|315100800|gb|EFT72776.1| ABC 3 transport family protein [Propionibacterium acnes HL046PA1]
 gi|315107261|gb|EFT79237.1| ABC 3 transport family protein [Propionibacterium acnes HL030PA1]
 gi|315108017|gb|EFT79993.1| ABC 3 transport family protein [Propionibacterium acnes HL030PA2]
 gi|327326802|gb|EGE68585.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Propionibacterium acnes HL096PA2]
 gi|327330501|gb|EGE72248.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Propionibacterium acnes HL096PA3]
 gi|327442996|gb|EGE89650.1| ABC 3 transport family protein [Propionibacterium acnes HL043PA1]
 gi|327445118|gb|EGE91772.1| ABC 3 transport family protein [Propionibacterium acnes HL043PA2]
 gi|327446933|gb|EGE93587.1| ABC 3 transport family protein [Propionibacterium acnes HL013PA2]
 gi|327450101|gb|EGE96755.1| ABC 3 transport family protein [Propionibacterium acnes HL087PA3]
 gi|327455173|gb|EGF01828.1| ABC 3 transport family protein [Propionibacterium acnes HL092PA1]
 gi|327455345|gb|EGF02000.1| ABC 3 transport family protein [Propionibacterium acnes HL083PA2]
 gi|328752514|gb|EGF66130.1| ABC 3 transport family protein [Propionibacterium acnes HL020PA1]
 gi|328752766|gb|EGF66382.1| ABC 3 transport family protein [Propionibacterium acnes HL087PA1]
 gi|328759312|gb|EGF72928.1| ABC 3 transport family protein [Propionibacterium acnes HL025PA2]
 gi|328760201|gb|EGF73774.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Propionibacterium acnes HL099PA1]
 gi|332675025|gb|AEE71841.1| ABC-type Mn2+/Zn2+ transport system, permease component [Propionibacterium 
acnes 266]
 gi|333762550|gb|EGL40045.1| ABC 3 transport family protein [Propionibacterium sp. 434-HC2]
 gi|335277040|gb|AEH28945.1| ABC 3 transport family protein [Propionibacterium acnes 6609]
 gi|340773476|gb|EGR95968.1| ABC 3 transport family protein [Propionibacterium acnes SK182]
Length=284

 Score =  146 bits (369),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 100/135 (75%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L VV + V   L I +RPL FA+VDPE A ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVVVAIFVAVCLGIIWRPLFFASVDPEAAKARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA+V   P+A    S+VFA VSAVGGI+LSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVGGIMLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   R+RR
Sbjct  263  IYLVCLGLGAIRQRR  277


>gi|315096553|gb|EFT68529.1| ABC 3 transport family protein [Propionibacterium acnes HL038PA1]
Length=284

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 80/135 (60%), Positives = 100/135 (75%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L +V + V   L I +RPL FA+VDPE A ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVIVAIFVAVCLGIIWRPLFFASVDPEAAKARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA+V   P+A    S+VFA VSAVGGI+LSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVGGIMLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   R+RR
Sbjct  263  IYLVCLGLGAIRQRR  277


>gi|227834030|ref|YP_002835737.1| putative ABC transport system, permease protein [Corynebacterium 
aurimucosum ATCC 700975]
 gi|227455046|gb|ACP33799.1| putative ABC transport system, permease protein [Corynebacterium 
aurimucosum ATCC 700975]
Length=320

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 77/136 (57%), Positives = 105/136 (78%), Gaps = 4/136 (2%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L     ++V V+A+ +RPLLFA+ DP +A A GVPV++L + FA L+G+ AAQ+VQIVG
Sbjct  144  LLAATTAIIVAVVALFWRPLLFASADPVMAQAAGVPVKSLAVCFAILVGLTAAQSVQIVG  203

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +P+ A+  S +FAEVSAVGG++LSLAPG+PVSVFV +ISF
Sbjct  204  SLLVMALLITPGAAAVQITSSPLRAVVWSTIFAEVSAVGGLVLSLAPGLPVSVFVTSISF  263

Query  121  VIYLIC----WLLRRR  132
            VIYL+C    W   R+
Sbjct  264  VIYLVCRGIGWARSRK  279


>gi|262183484|ref|ZP_06042905.1| putative ABC transport system, permease protein [Corynebacterium 
aurimucosum ATCC 700975]
Length=315

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 77/136 (57%), Positives = 105/136 (78%), Gaps = 4/136 (2%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L     ++V V+A+ +RPLLFA+ DP +A A GVPV++L + FA L+G+ AAQ+VQIVG
Sbjct  139  LLAATTAIIVAVVALFWRPLLFASADPVMAQAAGVPVKSLAVCFAILVGLTAAQSVQIVG  198

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +P+ A+  S +FAEVSAVGG++LSLAPG+PVSVFV +ISF
Sbjct  199  SLLVMALLITPGAAAVQITSSPLRAVVWSTIFAEVSAVGGLVLSLAPGLPVSVFVTSISF  258

Query  121  VIYLIC----WLLRRR  132
            VIYL+C    W   R+
Sbjct  259  VIYLVCRGIGWARSRK  274


>gi|313836981|gb|EFS74695.1| ABC 3 transport family protein [Propionibacterium acnes HL037PA2]
 gi|314929429|gb|EFS93260.1| ABC 3 transport family protein [Propionibacterium acnes HL044PA1]
 gi|314971487|gb|EFT15585.1| ABC 3 transport family protein [Propionibacterium acnes HL037PA3]
 gi|328906831|gb|EGG26597.1| ABC 3 transport family protein [Propionibacterium humerusii P08]
Length=284

 Score =  145 bits (367),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 82/135 (61%), Positives = 99/135 (74%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L  V ++V   L I +RPL FA+VDPE A ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVTVAIIVAVCLGIIWRPLFFASVDPEAARARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA+V   P+A    SVVFA VSAVGGILLSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKVTAHPLAMSLLSVVFATVSAVGGILLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   RR R
Sbjct  263  IYLVCLGLGAIRRHR  277


>gi|333918325|ref|YP_004491906.1| metal ion ABC transporter permease [Amycolicicoccus subflavus 
DQS3-9A1]
 gi|333480546|gb|AEF39106.1| ABC metal ion transporter, permease component [Amycolicicoccus 
subflavus DQS3-9A1]
Length=283

 Score =  145 bits (365),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 75/116 (65%), Positives = 95/116 (82%), Gaps = 0/116 (0%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            YRPLLFA+ DPEVAAARGVPV  L +VFA L+G+  +  VQIVGALLV+SLL+TPAAAA+
Sbjct  162  YRPLLFASTDPEVAAARGVPVHFLTVVFAVLVGLAVSIGVQIVGALLVLSLLVTPAAAAS  221

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWLLRRR  132
            RV   P+     +++FA+ +A+GGI+LSLAPGVPVSVFV +ISF+IY++C LL RR
Sbjct  222  RVTADPLKITLLALLFAQTAAIGGIILSLAPGVPVSVFVTSISFLIYMVCRLLGRR  277


>gi|335050574|ref|ZP_08543534.1| ABC 3 transport family protein [Propionibacterium sp. 409-HC1]
 gi|342213608|ref|ZP_08706333.1| ABC 3 transport family protein [Propionibacterium sp. CC003-HC2]
 gi|313812540|gb|EFS50254.1| ABC 3 transport family protein [Propionibacterium acnes HL025PA1]
 gi|327331117|gb|EGE72857.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Propionibacterium acnes HL097PA1]
 gi|333769426|gb|EGL46549.1| ABC 3 transport family protein [Propionibacterium sp. 409-HC1]
 gi|340769152|gb|EGR91677.1| ABC 3 transport family protein [Propionibacterium sp. CC003-HC2]
Length=284

 Score =  145 bits (365),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 99/135 (74%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L  V + V   L I +RPL FA+VDPE A ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVAVAIFVAVCLGIIWRPLFFASVDPEAARARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA+V   P+A    S+VFA VSAVGGILLSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVGGILLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   R+RR
Sbjct  263  IYLVCLGLGAIRQRR  277


>gi|340774517|gb|EGR97001.1| ABC 3 transport family protein [Propionibacterium acnes SK182B-JCVI]
Length=284

 Score =  145 bits (365),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 99/135 (74%), Gaps = 3/135 (2%)

Query  2    LTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGA  61
            L  V + V   L I +RPL FA+VDPE A ARGVP+R L IVF  L+G+  A AVQ+VGA
Sbjct  143  LVAVAIFVAVCLGIIWRPLFFASVDPEAARARGVPMRFLSIVFMLLLGLTTAMAVQLVGA  202

Query  62   LLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFV  121
            LLV+SLLITP AAAA+V   P+A    S+VFA VSAVGGILLSL PG+P+S +V T+SF+
Sbjct  203  LLVLSLLITPTAAAAKVTAHPLAMSLLSIVFATVSAVGGILLSLGPGLPISPYVTTVSFL  262

Query  122  IYLICWLL---RRRR  133
            IYL+C  L   R+RR
Sbjct  263  IYLVCLGLGAIRQRR  277


>gi|25029070|ref|NP_739124.1| hypothetical protein CE2514 [Corynebacterium efficiens YS-314]
 gi|259505938|ref|ZP_05748840.1| Mn2+/Zn2+/Fe2+ ABC superfamily ATP binding cassette transporter, 
permease protein [Corynebacterium efficiens YS-314]
 gi|23494357|dbj|BAC19324.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166419|gb|EEW50973.1| Mn2+/Zn2+/Fe2+ ABC superfamily ATP binding cassette transporter, 
permease protein [Corynebacterium efficiens YS-314]
Length=290

 Score =  144 bits (364),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 78/126 (62%), Positives = 100/126 (80%), Gaps = 0/126 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L  V ++VV  +AI +RPLLFA+VDP +A A G+ VR + I FA LMG+  +Q+VQIVG
Sbjct  138  ILVAVTVIVVGAVAIFWRPLLFASVDPVLARASGLNVRMIAIGFAVLMGLATSQSVQIVG  197

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVMSLLI P AAA +V   P+ A+  S++FAEV+AVGG+LLSLAPG+PVSVFV TISF
Sbjct  198  ALLVMSLLIVPGAAAVQVTSNPITAVVLSLIFAEVAAVGGLLLSLAPGLPVSVFVTTISF  257

Query  121  VIYLIC  126
            +IYL+C
Sbjct  258  IIYLVC  263


>gi|300780480|ref|ZP_07090336.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium genitalium ATCC 33030]
 gi|300534590|gb|EFK55649.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium genitalium ATCC 33030]
Length=277

 Score =  144 bits (363),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 76/120 (64%), Positives = 98/120 (82%), Gaps = 3/120 (2%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            +RP+L+A+ DP +AA  GV VRA+ I FA L+G+ +AQ+VQIVGALLVMSLLITP AAA+
Sbjct  155  WRPMLYASADPIMAAGSGVRVRAMSITFAVLVGIASAQSVQIVGALLVMSLLITPGAAAS  214

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWLL---RRRR  133
            ++   PV A+  SV+FAEV+AVGG++LSLAPGVPVSVFVA ISF IYL+C ++   +RRR
Sbjct  215  QITANPVHAVGWSVLFAEVAAVGGMILSLAPGVPVSVFVAFISFGIYLVCRIIGGVQRRR  274


>gi|334564028|ref|ZP_08517019.1| putative ABC transport system, permease protein [Corynebacterium 
bovis DSM 20582]
Length=277

 Score =  143 bits (361),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 82/120 (69%), Positives = 94/120 (79%), Gaps = 5/120 (4%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            +RPLL+ATVDP +AAA GVPVR L +VFAAL+GVVA+Q VQIVGALL+M+LLITP AAA 
Sbjct  146  WRPLLYATVDPVLAAAAGVPVRLLAVVFAALLGVVASQGVQIVGALLLMALLITPGAAAV  205

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLIC-----WLLRR  131
            RV   PV A+  S VFA VSAVGG++ SLAPG+PVS FV TISFVIYL C     W  RR
Sbjct  206  RVTSNPVVAVLLSAVFATVSAVGGLVASLAPGLPVSPFVTTISFVIYLACRGVAAWRDRR  265


>gi|255325872|ref|ZP_05366964.1| ABC-type Mn2+/Zn2+ transport system, permease component [Corynebacterium 
tuberculostearicum SK141]
 gi|255297084|gb|EET76409.1| ABC-type Mn2+/Zn2+ transport system, permease component [Corynebacterium 
tuberculostearicum SK141]
Length=299

 Score =  143 bits (360),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 74/133 (56%), Positives = 103/133 (78%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L    ++++  +AI +RP+LFA+ DP +A A GVP R + + FA L+G+ AAQ+VQIVG
Sbjct  139  LLAATTVVILAAVAILWRPMLFASADPVMAQAAGVPTRFISVAFAVLVGLAAAQSVQIVG  198

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +P+ A+  + +FAEVSAVGG +LSLAPG+PVSVFV TISF
Sbjct  199  SLLVMALLITPGAAAVQITSSPLRAVMWATIFAEVSAVGGFVLSLAPGLPVSVFVTTISF  258

Query  121  VIYLICWLLRRRR  133
            VIYL+C L+  +R
Sbjct  259  VIYLVCRLIGWQR  271


>gi|296118933|ref|ZP_06837506.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Corynebacterium ammoniagenes DSM 20306]
 gi|295968031|gb|EFG81283.1| putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component 
[Corynebacterium ammoniagenes DSM 20306]
Length=322

 Score =  143 bits (360),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 76/136 (56%), Positives = 105/136 (78%), Gaps = 3/136 (2%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L    ++VV  +   +RP+LFA+ DP +A A G+PVR + ++FA L+G+ AAQ+VQIVG
Sbjct  141  LLMRTTIIVVGAVFFFWRPMLFASADPVMAQAAGIPVRVISVIFAVLVGLAAAQSVQIVG  200

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVM+LLITP AAA ++  +P+ ++  SV+FAEV+AVGG++LSLAPG+PVSVFV TISF
Sbjct  201  ALLVMALLITPGAAAVQLTSSPLKSVVLSVIFAEVAAVGGLILSLAPGLPVSVFVTTISF  260

Query  121  VIYLICW---LLRRRR  133
            VIYLIC    ++  RR
Sbjct  261  VIYLICRGIAMVHNRR  276


>gi|311740182|ref|ZP_07714014.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304737|gb|EFQ80808.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium pseudogenitalium ATCC 33035]
Length=304

 Score =  143 bits (360),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 74/133 (56%), Positives = 103/133 (78%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L    ++++  +AI +RP+LFA+ DP +A A GVP R + + FA L+G+ AAQ+VQIVG
Sbjct  144  LLAATTVVILAAVAILWRPMLFASADPVMAQAAGVPTRFISVAFAVLVGLAAAQSVQIVG  203

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            +LLVM+LLITP AAA ++  +P+ A+  + +FAEVSAVGG +LSLAPG+PVSVFV TISF
Sbjct  204  SLLVMALLITPGAAAVQITSSPLRAVMWATIFAEVSAVGGFVLSLAPGLPVSVFVTTISF  263

Query  121  VIYLICWLLRRRR  133
            VIYL+C L+  +R
Sbjct  264  VIYLMCRLIGWQR  276


>gi|172041344|ref|YP_001801058.1| putative ABC transport system, permease protein [Corynebacterium 
urealyticum DSM 7109]
 gi|171852648|emb|CAQ05624.1| putative ABC transport system, permease protein [Corynebacterium 
urealyticum DSM 7109]
Length=335

 Score =  141 bits (355),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 78/133 (59%), Positives = 106/133 (80%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            ML ++ ++VV V+A+ +RPLLFATVDP +AAA GV VR L I+FAA++G VA+Q VQIVG
Sbjct  143  MLAIMTVIVVAVIALLWRPLLFATVDPTMAAASGVKVRLLSILFAAVLGAVASQGVQIVG  202

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALL+++LLITP AAA +V   P+ A+  S +F+  +AVGG++LSLAPG+PVSVFV T+SF
Sbjct  203  ALLLLALLITPGAAAVKVTANPLVAVVLSAIFSVTAAVGGLVLSLAPGLPVSVFVTTLSF  262

Query  121  VIYLICWLLRRRR  133
            +IYL+CW +   R
Sbjct  263  LIYLVCWFIEWLR  275


>gi|326383069|ref|ZP_08204758.1| ABC-3 protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326198205|gb|EGD55390.1| ABC-3 protein [Gordonia neofelifaecis NRRL B-59395]
Length=287

 Score =  141 bits (355),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 75/115 (66%), Positives = 93/115 (81%), Gaps = 0/115 (0%)

Query  18   RPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAAR  77
            RPLLFA++DP VAAA GVPVR L +VFA L+G+ AAQ VQI+GALLVMSLLITPAAAA R
Sbjct  170  RPLLFASLDPRVAAASGVPVRLLSVVFAILVGLAAAQGVQIIGALLVMSLLITPAAAAVR  229

Query  78   VVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICWLLRRR  132
            +   P   +  S+VFAE+SA+GG++LSLAP +P+SV V TISFVIY+IC ++  R
Sbjct  230  LSANPTVVVVLSIVFAEISAIGGLILSLAPELPISVMVTTISFVIYVICRIVGMR  284


>gi|134097064|ref|YP_001102725.1| ABC-type transporter, permease component [Saccharopolyspora erythraea 
NRRL 2338]
 gi|291006995|ref|ZP_06564968.1| ABC-type transporter, permease component [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133909687|emb|CAL99799.1| ABC-type transporter, permease component [Saccharopolyspora erythraea 
NRRL 2338]
Length=292

 Score =  140 bits (353),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 83/136 (62%), Positives = 100/136 (74%), Gaps = 3/136 (2%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +LT     V+ VLA  YRPLLFA+VDP+VAAARGVP R L  +FA L+GV  A  V  VG
Sbjct  149  LLTSCAAAVLLVLAFVYRPLLFASVDPDVAAARGVPARVLTPLFAVLVGVATALGVYTVG  208

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLV++L++TP AAAARV  +PV A   +VVFAEV+ +GGI+LSLAPG PVS FV  ISF
Sbjct  209  ALLVLALMVTPGAAAARVTASPVKATLLAVVFAEVAVLGGIVLSLAPGAPVSAFVTIISF  268

Query  121  VIYLICWL---LRRRR  133
            VIYL+C +   LR RR
Sbjct  269  VIYLVCRVVGNLRLRR  284


>gi|19553829|ref|NP_601831.1| ABC-type transporter, permease component [Corynebacterium glutamicum 
ATCC 13032]
 gi|62391469|ref|YP_226871.1| ABC-type Mn2+/Zn2+ transport system, permease component [Corynebacterium 
glutamicum ATCC 13032]
 gi|41326810|emb|CAF21292.1| ABC-type Mn2+/Zn2+ transport system, permease component [Corynebacterium 
glutamicum ATCC 13032]
Length=293

 Score =  139 bits (350),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 76/119 (64%), Positives = 92/119 (78%), Gaps = 4/119 (3%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            +RPLLFA+ DP +A A GV VR + + FA L+G+  +Q+VQIVGALLVM+LLITP AAA 
Sbjct  156  WRPLLFASADPIMAQASGVNVRFIAVAFAVLVGLTTSQSVQIVGALLVMALLITPGAAAV  215

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLIC----WLLRR  131
             V   PV A+  +V+FAEVSAVGG+LLSLAPG+PVSVFV TISFVIYL+C    WL  R
Sbjct  216  AVTANPVKAVVLAVIFAEVSAVGGLLLSLAPGLPVSVFVTTISFVIYLVCRLIGWLRGR  274


>gi|145296629|ref|YP_001139450.1| hypothetical protein cgR_2537 [Corynebacterium glutamicum R]
 gi|140846549|dbj|BAF55548.1| hypothetical protein [Corynebacterium glutamicum R]
 gi|344046301|gb|EGV41967.1| hypothetical protein CgS9114_01080 [Corynebacterium glutamicum 
S9114]
Length=293

 Score =  139 bits (350),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 76/119 (64%), Positives = 92/119 (78%), Gaps = 4/119 (3%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            +RPLLFA+ DP +A A GV VR + + FA L+G+  +Q+VQIVGALLVM+LLITP AAA 
Sbjct  156  WRPLLFASADPIMAQASGVNVRFIAVAFAVLVGLTTSQSVQIVGALLVMALLITPGAAAV  215

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLIC----WLLRR  131
             V   PV A+  +V+FAEVSAVGG+LLSLAPG+PVSVFV TISFVIYL+C    WL  R
Sbjct  216  AVTANPVKAVVLAVIFAEVSAVGGLLLSLAPGLPVSVFVTTISFVIYLVCRLIGWLRGR  274


>gi|227489410|ref|ZP_03919726.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227090588|gb|EEI25900.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium glucuronolyticum ATCC 51867]
Length=276

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 79/133 (60%), Positives = 102/133 (77%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L +V L+V+  +A+ +R LLF +VDP +AAA G+ +RA  ++FA L+G+ AAQ+VQIVG
Sbjct  136  ILGLVALVVIATVAVFFRQLLFTSVDPVMAAATGLNLRAYAVLFAVLVGLAAAQSVQIVG  195

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVM+LLITP AAA  V   P   IA S VFA V+AVGG +LSLAPG+PVSVFV TISF
Sbjct  196  ALLVMALLITPGAAACAVTSNPRVTIALSTVFALVAAVGGFVLSLAPGLPVSVFVTTISF  255

Query  121  VIYLICWLLRRRR  133
            VIYL+C L+  +R
Sbjct  256  VIYLVCRLVGWQR  268


>gi|213965147|ref|ZP_03393345.1| ABC-type Mn2+/Zn2+ transport system, permease component [Corynebacterium 
amycolatum SK46]
 gi|213952261|gb|EEB63645.1| ABC-type Mn2+/Zn2+ transport system, permease component [Corynebacterium 
amycolatum SK46]
Length=290

 Score =  138 bits (347),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/111 (67%), Positives = 90/111 (82%), Gaps = 0/111 (0%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            +RPLLFA+ DP +AAA GV V+AL I FA L G+VAAQ VQIVG+LLV++L+ITP AAAA
Sbjct  158  WRPLLFASADPIMAAASGVNVKALSIYFAILTGLVAAQGVQIVGSLLVIALIITPGAAAA  217

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLICW  127
             V  +PV AI  S +FAE +AVGGI+LSLAPG+PVSV V TI+FVIYL C+
Sbjct  218  FVTASPVKAIILSTIFAEFAAVGGIVLSLAPGIPVSVLVTTIAFVIYLFCY  268


>gi|21325402|dbj|BAC00024.1| ABC-type transporter, permease components [Corynebacterium glutamicum 
ATCC 13032]
Length=185

 Score =  138 bits (347),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 76/119 (64%), Positives = 92/119 (78%), Gaps = 4/119 (3%)

Query  17   YRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVGALLVMSLLITPAAAAA  76
            +RPLLFA+ DP +A A GV VR + + FA L+G+  +Q+VQIVGALLVM+LLITP AAA 
Sbjct  48   WRPLLFASADPIMAQASGVNVRFIAVAFAVLVGLTTSQSVQIVGALLVMALLITPGAAAV  107

Query  77   RVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISFVIYLIC----WLLRR  131
             V   PV A+  +V+FAEVSAVGG+LLSLAPG+PVSVFV TISFVIYL+C    WL  R
Sbjct  108  AVTANPVKAVVLAVIFAEVSAVGGLLLSLAPGLPVSVFVTTISFVIYLVCRLIGWLRGR  166


>gi|227541004|ref|ZP_03971053.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227183264|gb|EEI64236.1| cation ABC superfamily ATP binding cassette transporter, membrane 
protein [Corynebacterium glucuronolyticum ATCC 51866]
Length=276

 Score =  137 bits (344),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 78/133 (59%), Positives = 101/133 (76%), Gaps = 0/133 (0%)

Query  1    MLTVVCLLVVTVLAICYRPLLFATVDPEVAAARGVPVRALGIVFAALMGVVAAQAVQIVG  60
            +L +V L+V+  +A+ +R LLF +VDP +AAA G+ +RA  ++FA L+G+ AAQ+VQIVG
Sbjct  136  ILGLVALVVIATVAVFFRQLLFTSVDPVMAAATGLNLRAYAVLFAVLVGLAAAQSVQIVG  195

Query  61   ALLVMSLLITPAAAAARVVVAPVAAIATSVVFAEVSAVGGILLSLAPGVPVSVFVATISF  120
            ALLVM+LLITP AAA  V   P   IA S  FA V+AVGG +LSLAPG+PVSVFV TISF
Sbjct  196  ALLVMALLITPGAAACAVTSNPRVTIALSTAFALVAAVGGFVLSLAPGLPVSVFVTTISF  255

Query  121  VIYLICWLLRRRR  133
            VIYL+C L+  +R
Sbjct  256  VIYLVCRLVGWQR  268



Lambda     K      H
   0.333    0.141    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130457467840


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40