BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2077c

Length=323
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609214|ref|NP_216593.1|  transmembrane protein [Mycobacteriu...   644    0.0  
gi|183984032|ref|YP_001852323.1|  hypothetical protein MMAR_4061 ...   244    2e-62
gi|118465678|ref|YP_879971.1|  hypothetical protein MAV_0692 [Myc...   228    8e-58
gi|342858515|ref|ZP_08715170.1|  hypothetical protein MCOL_06556 ...   223    5e-56
gi|118464810|ref|YP_882824.1|  hypothetical protein MAV_3647 [Myc...   222    5e-56
gi|41408570|ref|NP_961406.1|  hypothetical protein MAP2472 [Mycob...   221    1e-55
gi|336460919|gb|EGO39802.1|  hypothetical protein MAPs_35850 [Myc...   221    1e-55
gi|183980150|ref|YP_001848441.1|  hypothetical protein MMAR_0116 ...   215    6e-54
gi|118466269|ref|YP_881458.1|  hypothetical protein MAV_2254 [Myc...   210    3e-52
gi|118464060|ref|YP_880692.1|  hypothetical protein MAV_1450 [Myc...   210    3e-52
gi|340626959|ref|YP_004745411.1|  hypothetical protein MCAN_19661...   210    3e-52
gi|254774328|ref|ZP_05215844.1|  hypothetical protein MaviaA2_066...   207    2e-51
gi|118464941|ref|YP_880720.1|  hypothetical protein MAV_1479 [Myc...   204    2e-50
gi|240172763|ref|ZP_04751422.1|  hypothetical protein MkanA1_2583...   190    2e-46
gi|342860951|ref|ZP_08717600.1|  hypothetical protein MCOL_18807 ...   179    4e-43
gi|183980513|ref|YP_001848804.1|  hypothetical protein MMAR_0484 ...   177    3e-42
gi|118616857|ref|YP_905189.1|  hypothetical protein MUL_1136 [Myc...   176    6e-42
gi|183983552|ref|YP_001851843.1|  hypothetical protein MMAR_3572 ...   140    3e-31
gi|240170349|ref|ZP_04749008.1|  hypothetical protein MkanA1_1363...   137    2e-30
gi|296170642|ref|ZP_06852217.1|  conserved hypothetical protein [...   135    1e-29
gi|118466271|ref|YP_880360.1|  hypothetical protein MAV_1108 [Myc...   123    3e-26
gi|15609086|ref|NP_216465.1|  hypothetical protein Rv1949c [Mycob...   122    9e-26
gi|289570036|ref|ZP_06450263.1|  conserved hypothetical protein [...   121    1e-25
gi|289762103|ref|ZP_06521481.1|  conserved hypothetical protein [...   121    1e-25
gi|342860790|ref|ZP_08717440.1|  hypothetical protein MCOL_18003 ...   120    3e-25
gi|41407315|ref|NP_960151.1|  hypothetical protein MAP1217c [Myco...   118    2e-24
gi|118464597|ref|YP_882327.1|  hypothetical protein MAV_3143 [Myc...   117    3e-24
gi|41407431|ref|NP_960267.1|  hypothetical protein MAP1333 [Mycob...   115    7e-24
gi|336457784|gb|EGO36778.1|  hypothetical protein MAPs_18830 [Myc...   115    8e-24
gi|183980511|ref|YP_001848802.1|  hypothetical protein MMAR_0482 ...   111    2e-22
gi|296164510|ref|ZP_06847081.1|  conserved hypothetical protein [...   109    6e-22
gi|15841420|ref|NP_336457.1|  hypothetical protein MT1999 [Mycoba...  99.8    5e-19
gi|31793141|ref|NP_855634.1|  hypothetical protein Mb1984c [Mycob...  99.8    5e-19
gi|118464287|ref|YP_882469.1|  hypothetical protein MAV_3287 [Myc...  94.0    3e-17
gi|118469187|ref|YP_889834.1|  hypothetical protein MSMEG_5600 [M...  93.6    3e-17
gi|15609087|ref|NP_216466.1|  hypothetical protein Rv1950c [Mycob...  89.7    6e-16
gi|298525444|ref|ZP_07012853.1|  conserved hypothetical protein [...  87.4    3e-15
gi|254775594|ref|ZP_05217110.1|  hypothetical protein MaviaA2_131...  84.3    2e-14
gi|289574633|ref|ZP_06454860.1|  transmembrane protein [Mycobacte...  84.0    3e-14
gi|240173425|ref|ZP_04752083.1|  putative transmembrane protein [...  80.1    4e-13
gi|118616854|ref|YP_905186.1|  hypothetical protein MUL_1133 [Myc...  79.7    6e-13
gi|145222562|ref|YP_001133240.1|  hypothetical protein Mflv_1972 ...  78.6    1e-12
gi|118468163|ref|YP_889699.1|  hypothetical protein MSMEG_5460 [M...  76.3    6e-12
gi|118462425|ref|YP_879781.1|  hypothetical protein MAV_0500 [Myc...  75.9    8e-12
gi|183980508|ref|YP_001848799.1|  hypothetical protein MMAR_0479 ...  72.4    1e-10
gi|118616851|ref|YP_905183.1|  hypothetical protein MUL_1130 [Myc...  72.4    1e-10
gi|169627124|ref|YP_001700773.1|  hypothetical protein MAB_0016 [...  72.0    1e-10
gi|120406653|ref|YP_956482.1|  hypothetical protein Mvan_5711 [My...  71.2    2e-10
gi|31793724|ref|NP_856217.1|  hypothetical protein Mb2571 [Mycoba...  67.8    2e-09
gi|15609679|ref|NP_217058.1|  hypothetical protein Rv2542 [Mycoba...  67.8    2e-09


>gi|15609214|ref|NP_216593.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
 gi|15841566|ref|NP_336603.1| hypothetical protein MT2137 [Mycobacterium tuberculosis CDC1551]
 gi|31793259|ref|NP_855752.1| transmembrane protein [Mycobacterium bovis AF2122/97]
 80 more sequence titles
 
gi|121637961|ref|YP_978185.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148661891|ref|YP_001283414.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
 gi|148823291|ref|YP_001288045.1| transmembrane protein [Mycobacterium tuberculosis F11]
 gi|167967782|ref|ZP_02550059.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra]
 gi|224990455|ref|YP_002645142.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|253798866|ref|YP_003031867.1| hypothetical protein TBMG_01905 [Mycobacterium tuberculosis KZN 
1435]
 gi|254232243|ref|ZP_04925570.1| hypothetical protein TBCG_02028 [Mycobacterium tuberculosis C]
 gi|254364889|ref|ZP_04980935.1| conserved transmembrane protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254551104|ref|ZP_05141551.1| hypothetical protein Mtube_11681 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289443581|ref|ZP_06433325.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289447696|ref|ZP_06437440.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554139|ref|ZP_06443349.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289570187|ref|ZP_06450414.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289574755|ref|ZP_06454982.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|289745351|ref|ZP_06504729.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289750671|ref|ZP_06510049.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289754187|ref|ZP_06513565.1| transmembrane protein [Mycobacterium tuberculosis EAS054]
 gi|289758196|ref|ZP_06517574.1| transmembrane protein [Mycobacterium tuberculosis T85]
 gi|289762234|ref|ZP_06521612.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 
1503]
 gi|294997016|ref|ZP_06802707.1| hypothetical protein Mtub2_21558 [Mycobacterium tuberculosis 
210]
 gi|297634654|ref|ZP_06952434.1| hypothetical protein MtubK4_11056 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731641|ref|ZP_06960759.1| hypothetical protein MtubKR_11156 [Mycobacterium tuberculosis 
KZN R506]
 gi|298525579|ref|ZP_07012988.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776315|ref|ZP_07414652.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306780101|ref|ZP_07418438.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306784847|ref|ZP_07423169.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306789211|ref|ZP_07427533.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|306793543|ref|ZP_07431845.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|306797928|ref|ZP_07436230.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|306803807|ref|ZP_07440475.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306808380|ref|ZP_07445048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306968202|ref|ZP_07480863.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306972429|ref|ZP_07485090.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307080137|ref|ZP_07489307.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307084718|ref|ZP_07493831.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313658976|ref|ZP_07815856.1| hypothetical protein MtubKV_11171 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632112|ref|YP_004723754.1| hypothetical protein MAF_20900 [Mycobacterium africanum GM041182]
 gi|54040435|sp|P64934.1|Y2102_MYCBO RecName: Full=Uncharacterized protein Mb2102c; Flags: Precursor
 gi|54042572|sp|P64933.1|Y2077_MYCTU RecName: Full=Uncharacterized protein Rv2077c/MT2137; Flags: 
Precursor
 gi|1370243|emb|CAA98222.1| POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|13881813|gb|AAK46417.1| hypothetical protein MT2137 [Mycobacterium tuberculosis CDC1551]
 gi|31618851|emb|CAD96955.1| POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis 
AF2122/97]
 gi|121493609|emb|CAL72083.1| Possible conserved transmembrane protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|124601302|gb|EAY60312.1| hypothetical protein TBCG_02028 [Mycobacterium tuberculosis C]
 gi|134150403|gb|EBA42448.1| conserved transmembrane protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148506043|gb|ABQ73852.1| putative conserved transmembrane protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148721818|gb|ABR06443.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
 gi|224773568|dbj|BAH26374.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|253320369|gb|ACT24972.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289416500|gb|EFD13740.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289420654|gb|EFD17855.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438771|gb|EFD21264.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289539186|gb|EFD43764.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|289543941|gb|EFD47589.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289685879|gb|EFD53367.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289691258|gb|EFD58687.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289694774|gb|EFD62203.1| transmembrane protein [Mycobacterium tuberculosis EAS054]
 gi|289709740|gb|EFD73756.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713760|gb|EFD77772.1| transmembrane protein [Mycobacterium tuberculosis T85]
 gi|298495373|gb|EFI30667.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215270|gb|EFO74669.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308327008|gb|EFP15859.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308330443|gb|EFP19294.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308334276|gb|EFP23127.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308338077|gb|EFP26928.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308341769|gb|EFP30620.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308345254|gb|EFP34105.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308349555|gb|EFP38406.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308354185|gb|EFP43036.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308358138|gb|EFP46989.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308362065|gb|EFP50916.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308365704|gb|EFP54555.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|323719372|gb|EGB28511.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903690|gb|EGE50623.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
 gi|328458623|gb|AEB04046.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
 gi|339294999|gb|AEJ47110.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298623|gb|AEJ50733.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180]
 gi|339331468|emb|CCC27160.1| putative conserved transmembrane protein [Mycobacterium africanum 
GM041182]
 gi|341601999|emb|CCC64673.1| possible conserved transmembrane protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
 gi|344219903|gb|AEN00534.1| transmembrane protein [Mycobacterium tuberculosis CTRI-2]
Length=323

 Score =  644 bits (1660),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 323/323 (100%), Positives = 323/323 (100%), Gaps = 0/323 (0%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA
Sbjct  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ
Sbjct  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAV  180
            PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAV
Sbjct  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAV  180

Query  181  QLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN  240
            QLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN
Sbjct  181  QLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN  240

Query  241  ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADW  300
            ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADW
Sbjct  241  ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADW  300

Query  301  ALLGAALLGVGGSGAAVVNCATK  323
            ALLGAALLGVGGSGAAVVNCATK
Sbjct  301  ALLGAALLGVGGSGAAVVNCATK  323


>gi|183984032|ref|YP_001852323.1| hypothetical protein MMAR_4061 [Mycobacterium marinum M]
 gi|183177358|gb|ACC42468.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=336

 Score =  244 bits (622),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 138/245 (57%), Positives = 167/245 (69%), Gaps = 13/245 (5%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQIRAWSTEHLID+AGYWT+TADRWED F Q+RNQ++A+ WNGAGG  LR+RT A
Sbjct  1    MPATLSQIRAWSTEHLIDSAGYWTKTADRWEDTFFQIRNQSYALDWNGAGGAALRERTSA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D   VS  AD LR+AA IAR+GA  I AAQRRV+YA+EDAQ+ GF VGEDLSVTDT+++ 
Sbjct  61   DLPLVSAKADVLRQAAGIARDGASGISAAQRRVLYAIEDAQNVGFTVGEDLSVTDTRSSG  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPV---VAH  177
             AA Q AR AQAQA AGDIRLR  QL AAE +V+GQL+A    +  + FA  P+   VAH
Sbjct  121  TAAEQVARHAQAQAFAGDIRLRAEQLDAAEVKVAGQLSAIRAGLSGIGFAENPIFNPVAH  180

Query  178  S-----AVQLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMML----PPAGTEAPVS  228
            +      +Q VD FKQD   PPP      +     P   P   M+L    PP   + P++
Sbjct  181  APANRIGIQPVD-FKQDSGAPPPFAPWDTADETPPPGKGPFNRMLLPSSTPPLEPDDPLN  239

Query  229  DATKR  233
            DA +R
Sbjct  240  DALRR  244


>gi|118465678|ref|YP_879971.1| hypothetical protein MAV_0692 [Mycobacterium avium 104]
 gi|118166965|gb|ABK67862.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=256

 Score =  228 bits (582),  Expect = 8e-58, Method: Compositional matrix adjust.
 Identities = 125/196 (64%), Positives = 142/196 (73%), Gaps = 3/196 (1%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI+AWSTEHLIDAA YWT+TADRWED FL MRNQA +I W+GAGGD LRQRT A
Sbjct  1    MPATLSQIQAWSTEHLIDAAAYWTQTADRWEDAFLTMRNQAQSITWHGAGGDALRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VSG ADQLR+AA IARNGA  I AAQRRV+Y VEDAQ+AGF VGEDLSVTDT++T 
Sbjct  61   DVSVVSGKADQLRQAAGIARNGASEISAAQRRVLYGVEDAQNAGFTVGEDLSVTDTRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAV  180
            PA   A +       A D+RLR  QL AA+ + +GQ+ AT GDVGN  F   P    + V
Sbjct  121  PAERAARQAQAEAFAA-DLRLRAEQLEAADTKAAGQITATAGDVGNATF--TPAHNGNGV  177

Query  181  QLVDFFKQDGPTPPPP  196
            QLVDF +  GP    P
Sbjct  178  QLVDFKQDGGPVCDDP  193


>gi|342858515|ref|ZP_08715170.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT 
3035]
 gi|342134219|gb|EGT87399.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT 
3035]
Length=358

 Score =  223 bits (567),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 130/250 (52%), Positives = 151/250 (61%), Gaps = 47/250 (18%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M  TLSQI  WSTEHL+DAA YWT+TADRWED FL MRNQA +I W+GAGG+ LRQRT A
Sbjct  1    MPPTLSQIEVWSTEHLVDAAAYWTQTADRWEDAFLTMRNQAQSITWHGAGGEALRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VS  AD LR+AA IARNGA  I AAQRRV+Y VEDAQ+AGF VGEDLSVTDT++T 
Sbjct  61   DVSVVSDKADLLRQAAGIARNGASDISAAQRRVLYGVEDAQNAGFAVGEDLSVTDTRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFA-------GAP  173
            PA  +AAR  QA+A A D+RLR  QL  A+ +VSGQL A T  +    FA       G+P
Sbjct  121  PAE-RAARQTQAEAFAADLRLRAEQLEGADVKVSGQLTAATAGLSGGGFAPGSGSSHGSP  179

Query  174  VVAHS--------AVQLVDFFKQD-------------------------------GPTPP  194
               H+          +LVD+FKQD                               GP  P
Sbjct  180  ADHHTTPGSNRNNGAKLVDYFKQDGGPQPQPQPGPPKPGQQPGFLDQYEQQLTSTGPQSP  239

Query  195  PPGAPHPSGG  204
            PP  P P+ G
Sbjct  240  PPAVPMPAFG  249


>gi|118464810|ref|YP_882824.1| hypothetical protein MAV_3647 [Mycobacterium avium 104]
 gi|118166097|gb|ABK66994.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=235

 Score =  222 bits (566),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 111/167 (67%), Positives = 134/167 (81%), Gaps = 0/167 (0%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M  TLSQ+RAW+TEHL++AA YW++TAD+WEDVFLQMRNQ+++I W GAGGDGLRQRT A
Sbjct  1    MPVTLSQVRAWTTEHLVNAASYWSKTADQWEDVFLQMRNQSYSITWKGAGGDGLRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VSG ADQLR+AA IARNGA  I AAQRRV+YAVEDAQ+AGF VGEDLSVTDT+++ 
Sbjct  61   DLSVVSGKADQLRKAAGIARNGASDIGAAQRRVLYAVEDAQNAGFTVGEDLSVTDTRSST  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNV  167
              A  AAR A+A+A AGDIR R  QL   + +V+ +L  TT D+G V
Sbjct  121  TPADHAARQARAEAFAGDIRARAEQLEGVDRKVARELTTTTADLGTV  167


>gi|41408570|ref|NP_961406.1| hypothetical protein MAP2472 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396928|gb|AAS04789.1| hypothetical protein MAP_2472 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=362

 Score =  221 bits (563),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 126/205 (62%), Positives = 145/205 (71%), Gaps = 18/205 (8%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI AWSTEHLI+AAGYWT+TADRWED FL MRNQA +IAW GAGGD LR+RT+A
Sbjct  1    MPATLSQILAWSTEHLIEAAGYWTQTADRWEDGFLTMRNQAQSIAWRGAGGDALRERTQA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VS  AD LR+AA IARNGA  I AAQRRV++ VEDAQ+AGF VGEDLSVTDT++T 
Sbjct  61   DLSVVSAKADLLRQAAGIARNGASDISAAQRRVLFGVEDAQNAGFTVGEDLSVTDTRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGA--PVVAHS  178
            PA  + AR A+A+A A DIRLR  QL  A+ +V+ QL A T  +G   FA A  P   H 
Sbjct  121  PAE-RPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSNHG  179

Query  179  A--------------VQLVDFFKQD  189
            A              V+LVD FKQD
Sbjct  180  AAAADRTTPGSNRNGVRLVD-FKQD  203


>gi|336460919|gb|EGO39802.1| hypothetical protein MAPs_35850 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=362

 Score =  221 bits (562),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 126/205 (62%), Positives = 145/205 (71%), Gaps = 18/205 (8%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI AWSTEHLI+AAGYWT+TADRWED FL MRNQA +IAW GAGGD LR+RT+A
Sbjct  1    MPATLSQILAWSTEHLIEAAGYWTQTADRWEDGFLTMRNQAQSIAWRGAGGDALRERTQA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VS  AD LR+AA IARNGA  I AAQRRV++ VEDAQ+AGF VGEDLSVTDT++T 
Sbjct  61   DLSVVSAKADLLRQAAGIARNGASDISAAQRRVLFGVEDAQNAGFTVGEDLSVTDTRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGA--PVVAHS  178
            PA  + AR A+A+A A DIRLR  QL  A+ +V+ QL A T  +G   FA A  P   H 
Sbjct  121  PAE-RPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSNHG  179

Query  179  A--------------VQLVDFFKQD  189
            A              V+LVD FKQD
Sbjct  180  AAAADRTTPGSNRNGVRLVD-FKQD  203


>gi|183980150|ref|YP_001848441.1| hypothetical protein MMAR_0116 [Mycobacterium marinum M]
 gi|183173476|gb|ACC38586.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=339

 Score =  215 bits (548),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 151/314 (49%), Positives = 189/314 (61%), Gaps = 34/314 (10%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQ+RAWSTEHLID AGYWT+TAD+WE+ F QMRNQ++A+ W+GAGGD LR+RT A
Sbjct  1    MPATLSQVRAWSTEHLIDTAGYWTKTADQWENAFFQMRNQSYALGWSGAGGDALRERTSA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D   V   AD LR+AA IA NGA  I AAQRRV+YAVEDA +AGF VGEDLSVTDT  + 
Sbjct  61   DLPIVGAKADMLRQAAGIAGNGASDISAAQRRVLYAVEDAHNAGFTVGEDLSVTDTHRSG  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSA-  179
              A QAAR AQAQA AGDIRL   QL  A+ +V+GQL A T D+ +V FA  P+ A  A 
Sbjct  121  TPAEQAARQAQAQAFAGDIRLHARQLDGADAKVAGQLTAATADLSSVGFAQNPIPATQAP  180

Query  180  ------VQLVDFFKQDGPTPP-------PPGAPHPSGGADGPYSDPITSMMLPPAGTEAP  226
                  VQLVD FKQ+G  PP       P G P P  GA G  S  +  M+L   G + P
Sbjct  181  TTHRNGVQLVD-FKQNGGEPPPFAPWDTPDGTPPP--GAPG-LSPELQQMIL---GGD-P  232

Query  227  VSDATKRWVDNMVNELAARPPDDPIA---------VEARRLAFQALHRPCNSAEWTAAVA  277
             +   +  +DN+   + + P +DP           ++A           C +++W     
Sbjct  233  ANLTGQGLLDNLQQLVQSLPENDPRTAWLRGQVADLQAHMSDIDYARTHCTTSDWFDRTT  292

Query  278  GFAGSSAGVVGTAL  291
             FA   +G+V T +
Sbjct  293  LFA---SGLVSTGI  303


>gi|118466269|ref|YP_881458.1| hypothetical protein MAV_2254 [Mycobacterium avium 104]
 gi|118167556|gb|ABK68453.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=354

 Score =  210 bits (534),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 125/227 (56%), Positives = 141/227 (63%), Gaps = 33/227 (14%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI AWSTEHLIDAA YWT+TADRWED FL MRNQA +I W+GAGGD LRQRT A
Sbjct  1    MPATLSQIEAWSTEHLIDAAAYWTQTADRWEDAFLTMRNQAQSITWHGAGGDALRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VSG AD LR+AA IARNGA  I AAQRRV+Y VEDA +AGF VGEDLSVTDT++T 
Sbjct  61   DLSVVSGKADLLRQAAGIARNGASDISAAQRRVLYGVEDALNAGFTVGEDLSVTDTRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFA----------  170
            PA   A +       A DIRLR  QL  A+ +VSGQL A T  +    FA          
Sbjct  121  PAERAARQAQAEAFAA-DIRLRAEQLDGADTKVSGQLTAATAGLSGGGFAQNSTSNRGGR  179

Query  171  --------GAP------------VVAHSAVQLVDFFKQD--GPTPPP  195
                    G P               H+ V+LVDF + +  GP PPP
Sbjct  180  AQNSSGNGGQPQPGHNAGQPQPATTNHNGVRLVDFTQDNASGPNPPP  226


>gi|118464060|ref|YP_880692.1| hypothetical protein MAV_1450 [Mycobacterium avium 104]
 gi|118165347|gb|ABK66244.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353

 Score =  210 bits (534),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 126/238 (53%), Positives = 144/238 (61%), Gaps = 27/238 (11%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI AWSTEHLI+AAGYWT+TADRWED FL MRNQA +I W GAGGD LR+RT+A
Sbjct  1    MPATLSQILAWSTEHLIEAAGYWTQTADRWEDGFLTMRNQAQSITWRGAGGDALRERTQA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VS  AD LR+AA IARNGA  I AAQRRV+Y +EDAQ+AGF VGEDLSVTD ++T 
Sbjct  61   DLSVVSAKADLLRQAAGIARNGASDISAAQRRVVYGIEDAQNAGFTVGEDLSVTDMRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFA----------  170
            PA   A +       A DIRLR  QL  A+ +V+GQL A T  +G   FA          
Sbjct  121  PAERAARQAQAEAFAA-DIRLRAEQLDGADTKVAGQLTAATAGLGGDGFAPASSHNSRQP  179

Query  171  --------------GAPVVAHSAVQLVDFFKQDGPTPPPPGAPHPSGGAD--GPYSDP  212
                          G P      V LVDF +  G  P P   P PS G    GP+  P
Sbjct  180  SAQKDGGQNRRSTSGVPNSQRGGVHLVDFKQDGGADPSPMPQPTPSQGQPQIGPFPVP  237


>gi|340626959|ref|YP_004745411.1| hypothetical protein MCAN_19661 [Mycobacterium canettii CIPT 
140010059]
 gi|340005149|emb|CCC44298.1| putative uncharacterized protein flags: fragment [Mycobacterium 
canettii CIPT 140010059]
Length=371

 Score =  210 bits (534),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 124/206 (61%), Positives = 151/206 (74%), Gaps = 11/206 (5%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            ML TLS I AW TEHLI+AA YWT+ AD+WEDVFL+MRN++H IAW GAGGDGLRQRT A
Sbjct  1    MLPTLSHIHAWDTEHLIEAAYYWTKVADQWEDVFLEMRNRSHFIAWEGAGGDGLRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D   VSGIA+ LR+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSVTDT+T++
Sbjct  61   DLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSR  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPV------  174
             AA QAAR AQAQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P+      
Sbjct  121  TAAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPT  180

Query  175  -VAHSA---VQLVD-FFKQDGPTPPP  195
             V H+    +  VD  +KQD P+P P
Sbjct  181  PVPHNEKPQIHAVDRSWKQDPPSPMP  206


>gi|254774328|ref|ZP_05215844.1| hypothetical protein MaviaA2_06625 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=362

 Score =  207 bits (527),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 122/205 (60%), Positives = 139/205 (68%), Gaps = 18/205 (8%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI AWSTEHLI+AAGYWT+TADRWED FL MRNQA +IAW GAGGD LR+RT+A
Sbjct  1    MPATLSQILAWSTEHLIEAAGYWTQTADRWEDGFLTMRNQAQSIAWRGAGGDALRERTQA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VS  AD LR+AA IARNGA  I AAQRRV+Y +EDAQ+AGF VGEDLSVTDT++T 
Sbjct  61   DLSVVSAKADLLRQAAGIARNGASDISAAQRRVVYGIEDAQNAGFTVGEDLSVTDTRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGA--PVVAHS  178
            PA   A +       A DIRLR  QL  A+ +V+ QL A T  +G   FA A  P   H 
Sbjct  121  PAERAARQAQAEAFAA-DIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSNHG  179

Query  179  A--------------VQLVDFFKQD  189
            A              V+LVD FKQD
Sbjct  180  AAAADRTTPGSNRNGVRLVD-FKQD  203


>gi|118464941|ref|YP_880720.1| hypothetical protein MAV_1479 [Mycobacterium avium 104]
 gi|118166228|gb|ABK67125.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=362

 Score =  204 bits (518),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 120/205 (59%), Positives = 137/205 (67%), Gaps = 18/205 (8%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M ATLSQI AWSTEHLI+AA YWT+TADRWED FL MRNQA +I W GAGGD LR+RT+A
Sbjct  1    MPATLSQILAWSTEHLIEAAAYWTQTADRWEDGFLTMRNQAQSITWRGAGGDALRERTQA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D S VS  AD LR+AA IARNGA  I AAQRRV+Y +EDAQ+AGF VGEDLSVTD ++T 
Sbjct  61   DLSVVSAKADLLRQAAGIARNGASDISAAQRRVVYGIEDAQNAGFTVGEDLSVTDMRSTS  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGA--PVVAHS  178
            PA   A +       A DIRLR  QL  A+ +V+GQL A T  +G   FA A  P   H 
Sbjct  121  PAERAARQAQAEAFAA-DIRLRAEQLDGADTKVAGQLTAATAGLGGSGFAPASSPNSNHG  179

Query  179  A--------------VQLVDFFKQD  189
            A              V+LVD FKQD
Sbjct  180  AAAADRTTPGSNRNGVRLVD-FKQD  203


>gi|240172763|ref|ZP_04751422.1| hypothetical protein MkanA1_25837 [Mycobacterium kansasii ATCC 
12478]
Length=354

 Score =  190 bits (483),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 105/152 (70%), Positives = 122/152 (81%), Gaps = 0/152 (0%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            ML TLSQ++AW TEHL+DAA YW+ TAD WEDVFLQMRNQ+H I W+GAGG+ LR RT  
Sbjct  1    MLPTLSQLQAWDTEHLVDAAHYWSRTADLWEDVFLQMRNQSHTIVWDGAGGEALRARTGG  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D   V+  ADQLR+AA IAR GAGTI AAQRRV+YAV+DA DAGFNVGEDLSV DT+T++
Sbjct  61   DLVIVTAKADQLRQAAVIAREGAGTIGAAQRRVIYAVQDANDAGFNVGEDLSVADTRTSR  120

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENE  152
             AA QA+R AQAQA A DIR R  QL+ AE+E
Sbjct  121  TAAEQASRQAQAQAFAADIRQRATQLIGAEHE  152


>gi|342860951|ref|ZP_08717600.1| hypothetical protein MCOL_18807 [Mycobacterium colombiense CECT 
3035]
 gi|342131395|gb|EGT84665.1| hypothetical protein MCOL_18807 [Mycobacterium colombiense CECT 
3035]
Length=403

 Score =  179 bits (455),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 110/182 (61%), Positives = 130/182 (72%), Gaps = 2/182 (1%)

Query  3    ATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADF  62
            ATLSQIRAWST HL DAA YW++TAD+WED FL MRNQ+H+IAW GAGGD LRQRT AD 
Sbjct  4    ATLSQIRAWSTAHLTDAASYWSKTADQWEDTFLTMRNQSHSIAWKGAGGDALRQRTAADL  63

Query  63   STVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPA  122
            STVS  ADQLR+AA IAR+GA  I AAQR V+ AV DA++AGF+VGEDLSV+ T     A
Sbjct  64   STVSSKADQLRQAAGIARSGASDISAAQRSVLNAVADAENAGFDVGEDLSVSYTDHGGTA  123

Query  123  AVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAVQL  182
            + QAAR AQA+ +A  I  R  QL   E +V+ QL   T  +GN  FA      +S +QL
Sbjct  124  SQQAARQAQAEQMASQIWSRAKQLDGTEVKVADQLTTATTGLGNATFAHN--GKNSGIQL  181

Query  183  VD  184
            VD
Sbjct  182  VD  183


>gi|183980513|ref|YP_001848804.1| hypothetical protein MMAR_0484 [Mycobacterium marinum M]
 gi|183173839|gb|ACC38949.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=204

 Score =  177 bits (448),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 82/122 (68%), Positives = 103/122 (85%), Gaps = 0/122 (0%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M+ TLSQ++AWSTEHLI+AA YW++TAD+WEDVFLQMRNQ+H + W GAGGD LRQRT A
Sbjct  1    MVLTLSQVQAWSTEHLIEAATYWSKTADQWEDVFLQMRNQSHTLVWEGAGGDALRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D + VS  AD+LR+A+ IAR+GAGTI  AQRRV++AVEDA +AGF VGED SVTD +T++
Sbjct  61   DLAIVSTKADELRQASKIARDGAGTIGIAQRRVLHAVEDAHNAGFTVGEDFSVTDIRTSR  120

Query  121  PA  122
             +
Sbjct  121  SS  122


>gi|118616857|ref|YP_905189.1| hypothetical protein MUL_1136 [Mycobacterium ulcerans Agy99]
 gi|118568967|gb|ABL03718.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans 
Agy99]
Length=248

 Score =  176 bits (445),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 81/120 (68%), Positives = 101/120 (85%), Gaps = 0/120 (0%)

Query  1    MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA  60
            M+ TLSQ++AW TEHLI+AA YW++TAD+WEDVFLQMRNQ+H + W GAGGD LRQRT A
Sbjct  1    MVLTLSQVQAWRTEHLIEAATYWSKTADQWEDVFLQMRNQSHTLVWEGAGGDALRQRTGA  60

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D + VS  AD+LR+A+ IAR+GAGTI  AQRRV++AVEDA +AGF VGED SVTD +T++
Sbjct  61   DLAIVSTKADELRQASKIARDGAGTIGIAQRRVLHAVEDAHNAGFTVGEDFSVTDIRTSR  120


>gi|183983552|ref|YP_001851843.1| hypothetical protein MMAR_3572 [Mycobacterium marinum M]
 gi|183176878|gb|ACC41988.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=301

 Score =  140 bits (352),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 84/166 (51%), Positives = 105/166 (64%), Gaps = 0/166 (0%)

Query  2    LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRAD  61
            L TLS + AW TEHL +AA  WT    RW +VF Q+   + ++ W G G D L  RT AD
Sbjct  8    LPTLSNLMAWPTEHLTEAAASWTAAGHRWYEVFNQIWRDSLSVDWKGIGADALHTRTHAD  67

Query  62   FSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQP  121
             + VSG+ DQL  AA IAR GA  + AA+ RV YAVEDA DAGF VGEDLSVTD  T   
Sbjct  68   HTKVSGLVDQLHEAARIARVGASDLYAARSRVRYAVEDAHDAGFVVGEDLSVTDYSTGGS  127

Query  122  AAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNV  167
               +A R AQAQALA DIR R G L++ + +++G++      +GNV
Sbjct  128  LVERATRQAQAQALAADIRQRAGLLISLDGQLAGKVTTAMAGIGNV  173


>gi|240170349|ref|ZP_04749008.1| hypothetical protein MkanA1_13635 [Mycobacterium kansasii ATCC 
12478]
Length=346

 Score =  137 bits (346),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 113/344 (33%), Positives = 162/344 (48%), Gaps = 43/344 (12%)

Query  2    LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRAD  61
            L TLSQ+  W  EHL +A  YW   A +  D   Q+      + W G     LR  T AD
Sbjct  5    LPTLSQLLNWPYEHLNEAPAYWQALASKCYDAVGQVWRDTLNMDWEGEAITALRAATGAD  64

Query  62   FSTVSGIADQL-RRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
             +  + + DQ+ ++A   AR+GA  I  A+ R+ Y V+DA++AGF+V ED+SV DT TT 
Sbjct  65   KTIAANVYDQVTQQACKEARSGASQILDARNRLKYKVQDAEEAGFSVSEDMSVYDTHTTA  124

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVA----  176
                 A R AQAQA A DIRLR  +LV A+ +V+ ++ AT   +G   F G P+ A    
Sbjct  125  NPVELADRQAQAQAFAEDIRLRAAKLVTADTDVAQKVTATMAGIGPQAF-GEPINADDTI  183

Query  177  -----HSAVQLVDFFKQD--GPTPP-------PPGAPHPSGGADGPYSDPITSMMLPPAG  222
                 H+ VQLVDF + +  G  PP       P G P P  G     S  +  M+L    
Sbjct  184  IGDNKHNGVQLVDFTQDNAAGTNPPPFAPWDTPDGTPPPGTG----LSPKLQQMLL----  235

Query  223  TEAPVSDATKRWVDNMVNELAARPPDDPIA---------VEARRLAFQALHRPCNSAEWT  273
               P S   +  V+NM   + + P +DP           ++A     +     C + +W 
Sbjct  236  GSNPASLTGQGLVENMQRFVQSLPENDPRTAWLRGQVADLQAHVTDIEYARTHCTTRDWI  295

Query  274  AAVAGFAGSSAGVVGTALAIPAGPADWALLGAALLGVGGSGAAV  317
               + FA   +GV+ T   + A       +G A+ G GG G  +
Sbjct  296  ERTSQFA---SGVIVTGYGLLAAETG---VGLAVAGAGGVGTII  333


>gi|296170642|ref|ZP_06852217.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295894631|gb|EFG74365.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=281

 Score =  135 bits (339),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 83/158 (53%), Positives = 106/158 (68%), Gaps = 0/158 (0%)

Query  10   AWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFSTVSGIA  69
            AW TEHL +AA YW+ T +RW DVF Q  +++ ++ W G G D L+ RT AD   VSG+ 
Sbjct  2    AWPTEHLTNAADYWSSTGNRWYDVFAQTWHESLSVDWRGTGADALQTRTYADKLKVSGLV  61

Query  70   DQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARL  129
            DQL  AA +AR GA  + AA+ RV YAVEDA+DAGF VGEDLSVTD  T   +A ++AR 
Sbjct  62   DQLHEAAKVARAGASDLYAARSRVRYAVEDARDAGFAVGEDLSVTDRSTGGSSAARSARQ  121

Query  130  AQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNV  167
            AQAQA A DIR R  QL+  + +V+ ++ A    VGNV
Sbjct  122  AQAQAFAADIRQRAVQLIGLDEQVASKVNAAMAGVGNV  159


>gi|118466271|ref|YP_880360.1| hypothetical protein MAV_1108 [Mycobacterium avium 104]
 gi|118167558|gb|ABK68455.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=348

 Score =  123 bits (309),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 100/265 (38%), Positives = 136/265 (52%), Gaps = 27/265 (10%)

Query  10   AWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFSTVSGIA  69
            AW T+HL +AA YW   ++R   +  Q+   A +  W GA  + LR  T AD ++ S +A
Sbjct  2    AWPTDHLTEAADYWETVSERTFGIAHQVWRDALSADWRGAAAETLRGATHADMTSTSAVA  61

Query  70   DQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARL  129
            DQLR AA++AR GA  + AA+ RV YAVEDA  AGF+VGEDLS+ D       A +AAR 
Sbjct  62   DQLRAAASVARGGASDLSAARSRVRYAVEDAHSAGFDVGEDLSIRDRTVGGSTAQRAARQ  121

Query  130  AQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAVQLVDFFKQD  189
            AQA+ALAGDIR R  QLV+ + EV+G++ A    V  VR               D F  D
Sbjct  122  AQARALAGDIRQRAAQLVSLDQEVAGKITAA---VAGVR---------------DTFPHD  163

Query  190  GPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKR-WVDNMVNE--LAARP  246
                 P    H  G  +  + D  +S M      +A + D  KR W  N +++  +   P
Sbjct  164  PTANRPSTDGHVRGVDNHTFKDAPSSGMSREQA-KAGLKDVNKRIWEHNHIDKPVIEQLP  222

Query  247  PDDPIAVEARRLAFQALHRPCNSAE  271
            P+DP     RR  F       N+ +
Sbjct  223  PNDP-----RRADFHVETEQLNAEK  242


>gi|15609086|ref|NP_216465.1| hypothetical protein Rv1949c [Mycobacterium tuberculosis H37Rv]
 gi|1806213|emb|CAB06512.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|326903555|gb|EGE50488.1| LOW QUALITY PROTEIN: hypothetical protein TBPG_01431 [Mycobacterium 
tuberculosis W-148]
Length=319

 Score =  122 bits (306),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 84/153 (55%), Positives = 105/153 (69%), Gaps = 11/153 (7%)

Query  54   LRQRTRADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSV  113
            LRQRT AD   VSGIA+ LR+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSV
Sbjct  2    LRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  61

Query  114  TDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAP  173
            TDT+T++  A QAAR AQAQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P
Sbjct  62   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121

Query  174  V-------VAHSA---VQLVD-FFKQDGPTPPP  195
            +       V H+    +  VD  +KQD P+P P
Sbjct  122  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMP  154


>gi|289570036|ref|ZP_06450263.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289543790|gb|EFD47438.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=318

 Score =  121 bits (304),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 83/153 (55%), Positives = 105/153 (69%), Gaps = 11/153 (7%)

Query  54   LRQRTRADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSV  113
            +RQRT AD   VSGIA+ LR+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSV
Sbjct  1    MRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  60

Query  114  TDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAP  173
            TDT+T++  A QAAR AQAQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P
Sbjct  61   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  120

Query  174  V-------VAHSA---VQLVD-FFKQDGPTPPP  195
            +       V H+    +  VD  +KQD P+P P
Sbjct  121  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMP  153


>gi|289762103|ref|ZP_06521481.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709609|gb|EFD73625.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=318

 Score =  121 bits (304),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 83/153 (55%), Positives = 105/153 (69%), Gaps = 11/153 (7%)

Query  54   LRQRTRADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSV  113
            +RQRT AD   VSGIA+ LR+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSV
Sbjct  1    MRQRTGADLQIVSGIAEHLRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSV  60

Query  114  TDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAP  173
            TDT+T++  A QAAR AQAQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P
Sbjct  61   TDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  120

Query  174  V-------VAHSA---VQLVD-FFKQDGPTPPP  195
            +       V H+    +  VD  +KQD P+P P
Sbjct  121  IAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMP  153


>gi|342860790|ref|ZP_08717440.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT 
3035]
 gi|342131814|gb|EGT85071.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT 
3035]
Length=356

 Score =  120 bits (301),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 70/155 (46%), Positives = 90/155 (59%), Gaps = 0/155 (0%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LSQ+ AW T HL +AA YW     R   V  Q+     ++ W G   D L   T  D   
Sbjct  10   LSQVLAWPTRHLTEAADYWEAVGGRSYAVASQVWRDGLSVDWQGRAADALHAATHGDLQK  69

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
             S +ADQL+ AA +AR+GA  + AA+ RV Y VEDA  AGF+V ED+SVTD  T    A 
Sbjct  70   TSAVADQLQAAAKVARSGAADLSAARSRVRYVVEDAFGAGFDVREDMSVTDPSTGGSTAQ  129

Query  125  QAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAA  159
            +A R AQAQ  AGDIR R  QLVA + +V+ ++ +
Sbjct  130  RATRRAQAQGYAGDIRQRATQLVALDQQVAERVTS  164


>gi|41407315|ref|NP_960151.1| hypothetical protein MAP1217c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395667|gb|AAS03534.1| hypothetical protein MAP_1217c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458045|gb|EGO37032.1| hypothetical protein MAPs_17430 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=259

 Score =  118 bits (295),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 71/164 (44%), Positives = 96/164 (59%), Gaps = 4/164 (2%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LS++ AW T+HL +AA +W  T DRW + F +    + +I W G G + LR RT AD   
Sbjct  9    LSELLAWPTDHLTEAADHWMSTRDRWYEAFTETWKDSLSIGWQGNGAEALRSRTYADKVK  68

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
            VS + DQL  AA +AR GA  + AA+ R+  AV DA +AGF V EDLSVTD  T   +A 
Sbjct  69   VSDMVDQLHEAAKVARAGATDLSAARSRMRNAVVDAHEAGFYVHEDLSVTDLSTGNSSAD  128

Query  125  QAARLAQAQALAGDIRLRVGQLVAAE----NEVSGQLAATTGDV  164
            +A R A+A+A A DI  R   L+ A+    + +S  +A   G V
Sbjct  129  RAIREAEAEAYAADIHQRAADLIRADVRTADRISNAMAGLNGQV  172


>gi|118464597|ref|YP_882327.1| hypothetical protein MAV_3143 [Mycobacterium avium 104]
 gi|118165884|gb|ABK66781.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353

 Score =  117 bits (292),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 113/203 (56%), Gaps = 11/203 (5%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LSQ+ AW T+HL DAA +W    +R   V  Q+     +  W G   D L   T  D   
Sbjct  7    LSQVLAWPTQHLTDAARHWEAVGERSYSVIHQVWRDGLSSDWRGRAADALHAATHDDAGK  66

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
             SG+ADQLR AA +AR+GA  + AA+ RV YAVEDA  +GF+V ED+SV D  T   AA 
Sbjct  67   TSGVADQLRAAAGVARSGASELVAARSRVRYAVEDAMRSGFDVYEDMSVADRSTGGSAAQ  126

Query  125  QAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVV----AHSAV  180
            +AAR AQAQA AGDIR R  +LVA + +V+G++ A T  + +  F   P           
Sbjct  127  RAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT-FPQTPDSDAPQRKPKF  185

Query  181  QLVDF--FKQDGPTPPPPGAPHP  201
            Q VD   FK+D    PPP   +P
Sbjct  186  QAVDHHTFKED----PPPNGSYP  204


>gi|41407431|ref|NP_960267.1| hypothetical protein MAP1333 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395783|gb|AAS03650.1| hypothetical protein MAP_1333 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=261

 Score =  115 bits (289),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 112/203 (56%), Gaps = 11/203 (5%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LSQ+ AW T+HL DAA +W    +R   V  Q+     +  W G   D L   T  D   
Sbjct  10   LSQVLAWPTQHLTDAARHWEAVGERSYSVIHQVWRDGLSSDWRGRAADALHAATHDDVGK  69

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
             SG+ADQLR AA +AR+GA  + AA+ RV YAVEDA  +GF+V ED+SV D  T   AA 
Sbjct  70   TSGVADQLRAAAGVARSGACELVAARSRVRYAVEDAMRSGFDVYEDMSVADRSTGGSAAQ  129

Query  125  QAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVV----AHSAV  180
            +AAR AQAQA AGDIR R  +LVA + +V+G++ A T  + +  F   P           
Sbjct  130  RAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT-FPQTPDSDAPQRKPKF  188

Query  181  QLVDF--FKQDGPTPPPPGAPHP  201
              VD   FK+D    PPP   +P
Sbjct  189  HAVDHHTFKED----PPPNGSYP  207


>gi|336457784|gb|EGO36778.1| hypothetical protein MAPs_18830 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=356

 Score =  115 bits (289),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 112/203 (56%), Gaps = 11/203 (5%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LSQ+ AW T+HL DAA +W    +R   V  Q+     +  W G   D L   T  D   
Sbjct  10   LSQVLAWPTQHLTDAARHWEAVGERSYSVIHQVWRDGLSSDWRGRAADALHAATHDDVGK  69

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
             SG+ADQLR AA +AR+GA  + AA+ RV YAVEDA  +GF+V ED+SV D  T   AA 
Sbjct  70   TSGVADQLRAAAGVARSGACELVAARSRVRYAVEDAMRSGFDVYEDMSVADRSTGGSAAQ  129

Query  125  QAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVV----AHSAV  180
            +AAR AQAQA AGDIR R  +LVA + +V+G++ A T  + +  F   P           
Sbjct  130  RAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT-FPQTPDSDAPQRKPKF  188

Query  181  QLVDF--FKQDGPTPPPPGAPHP  201
              VD   FK+D    PPP   +P
Sbjct  189  HAVDHHTFKED----PPPNGSYP  207


>gi|183980511|ref|YP_001848802.1| hypothetical protein MMAR_0482 [Mycobacterium marinum M]
 gi|183173837|gb|ACC38947.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=371

 Score =  111 bits (278),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 97/162 (60%), Gaps = 0/162 (0%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LS + AW T+HL +AA +W    +    V  Q+   A +I W+G     LR  T AD  T
Sbjct  9    LSALLAWPTDHLTEAAAHWDNVGEHTYAVAHQLWRDATSIDWSGHAAGALRAATHADLQT  68

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
             S   DQL+ AA +ARNGA  + AA+ RV YAV DAQ AGF V EDLSVTD  T   AA 
Sbjct  69   TSAAVDQLQEAARVARNGASDLYAARSRVRYAVTDAQAAGFQVEEDLSVTDRMTGGSAAQ  128

Query  125  QAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGN  166
            +AAR AQAQA AGD+R R  QLV  + +V+ ++ A    +G+
Sbjct  129  RAARQAQAQAFAGDLRQRAAQLVGLDAQVATKVTAAVAGIGS  170


>gi|296164510|ref|ZP_06847081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900110|gb|EFG79545.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=406

 Score =  109 bits (273),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 111/200 (56%), Gaps = 10/200 (5%)

Query  5    LSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFST  64
            LSQ+  W TEHL  AA +W         +  Q+   + ++ W G     LR  T AD   
Sbjct  10   LSQLLTWPTEHLTQAADHWEAVGSSSYALANQVWRDSLSVDWQGEAAQALRTGTHADMMA  69

Query  65   VSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAV  124
             S  ADQL  AA +ARNGA  +  A+ R+ YAVEDA  AGF+VG+DLSV D      A +
Sbjct  70   TSRAADQLLLAAKVARNGATDLYGARSRLRYAVEDADAAGFDVGQDLSVADRSYGASATI  129

Query  125  QAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHS----AV  180
            +AAR AQAQA A DIR R  QLVA + +V+G++ A T  + +  F   P  A S     V
Sbjct  130  RAARQAQAQAFAADIRQRAAQLVALDQQVAGKVTAATAGIRDT-FPPDPGAATSPHEPEV  188

Query  181  QLVD--FFKQDGPTPPPPGA  198
            + VD   F++D   PPPPG+
Sbjct  189  RAVDNHTFQRD---PPPPGS  205


>gi|15841420|ref|NP_336457.1| hypothetical protein MT1999 [Mycobacterium tuberculosis CDC1551]
 gi|148661757|ref|YP_001283280.1| hypothetical protein MRA_1959 [Mycobacterium tuberculosis H37Ra]
 gi|148823161|ref|YP_001287915.1| hypothetical protein TBFG_11978 [Mycobacterium tuberculosis F11]
 48 more sequence titles
 
gi|167970535|ref|ZP_02552812.1| hypothetical protein MtubH3_21878 [Mycobacterium tuberculosis 
H37Ra]
 gi|253799004|ref|YP_003032005.1| hypothetical protein TBMG_02043 [Mycobacterium tuberculosis KZN 
1435]
 gi|254232120|ref|ZP_04925447.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254364769|ref|ZP_04980815.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550968|ref|ZP_05141415.1| hypothetical protein Mtube_10986 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289554275|ref|ZP_06443485.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289746113|ref|ZP_06505491.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289758058|ref|ZP_06517436.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996870|ref|ZP_06802561.1| hypothetical protein Mtub2_20788 [Mycobacterium tuberculosis 
210]
 gi|297634517|ref|ZP_06952297.1| hypothetical protein MtubK4_10361 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731505|ref|ZP_06960623.1| hypothetical protein MtubKR_10466 [Mycobacterium tuberculosis 
KZN R506]
 gi|298525443|ref|ZP_07012852.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306779962|ref|ZP_07418299.1| hypothetical protein TMBG_00484 [Mycobacterium tuberculosis SUMu002]
 gi|306784711|ref|ZP_07423033.1| hypothetical protein TMCG_00033 [Mycobacterium tuberculosis SUMu003]
 gi|306789068|ref|ZP_07427390.1| hypothetical protein TMDG_02770 [Mycobacterium tuberculosis SUMu004]
 gi|306793403|ref|ZP_07431705.1| hypothetical protein TMEG_01843 [Mycobacterium tuberculosis SUMu005]
 gi|306803667|ref|ZP_07440335.1| hypothetical protein TMHG_01126 [Mycobacterium tuberculosis SUMu008]
 gi|306808241|ref|ZP_07444909.1| hypothetical protein TMGG_00493 [Mycobacterium tuberculosis SUMu007]
 gi|306968064|ref|ZP_07480725.1| hypothetical protein TMIG_00602 [Mycobacterium tuberculosis SUMu009]
 gi|306972289|ref|ZP_07484950.1| hypothetical protein TMJG_00197 [Mycobacterium tuberculosis SUMu010]
 gi|307080000|ref|ZP_07489170.1| hypothetical protein TMKG_00201 [Mycobacterium tuberculosis SUMu011]
 gi|307084574|ref|ZP_07493687.1| hypothetical protein TMLG_01227 [Mycobacterium tuberculosis SUMu012]
 gi|313658838|ref|ZP_07815718.1| hypothetical protein MtubKV_10476 [Mycobacterium tuberculosis 
KZN V2475]
 gi|13881658|gb|AAK46271.1| hypothetical protein MT1999 [Mycobacterium tuberculosis CDC1551]
 gi|124601179|gb|EAY60189.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134150283|gb|EBA42328.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505909|gb|ABQ73718.1| hypothetical protein MRA_1959 [Mycobacterium tuberculosis H37Ra]
 gi|148721688|gb|ABR06313.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253320507|gb|ACT25110.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289438907|gb|EFD21400.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289686641|gb|EFD54129.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289713622|gb|EFD77634.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298495237|gb|EFI30531.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308327116|gb|EFP15967.1| hypothetical protein TMBG_00484 [Mycobacterium tuberculosis SUMu002]
 gi|308330552|gb|EFP19403.1| hypothetical protein TMCG_00033 [Mycobacterium tuberculosis SUMu003]
 gi|308334386|gb|EFP23237.1| hypothetical protein TMDG_02770 [Mycobacterium tuberculosis SUMu004]
 gi|308338182|gb|EFP27033.1| hypothetical protein TMEG_01843 [Mycobacterium tuberculosis SUMu005]
 gi|308345366|gb|EFP34217.1| hypothetical protein TMGG_00493 [Mycobacterium tuberculosis SUMu007]
 gi|308349669|gb|EFP38520.1| hypothetical protein TMHG_01126 [Mycobacterium tuberculosis SUMu008]
 gi|308354298|gb|EFP43149.1| hypothetical protein TMIG_00602 [Mycobacterium tuberculosis SUMu009]
 gi|308358240|gb|EFP47091.1| hypothetical protein TMJG_00197 [Mycobacterium tuberculosis SUMu010]
 gi|308362170|gb|EFP51021.1| hypothetical protein TMKG_00201 [Mycobacterium tuberculosis SUMu011]
 gi|308365826|gb|EFP54677.1| hypothetical protein TMLG_01227 [Mycobacterium tuberculosis SUMu012]
 gi|323719513|gb|EGB28639.1| hypothetical protein TMMG_01209 [Mycobacterium tuberculosis CDC1551A]
 gi|328458759|gb|AEB04182.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339294881|gb|AEJ46992.1| hypothetical protein CCDC5079_1802 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298504|gb|AEJ50614.1| hypothetical protein CCDC5180_1777 [Mycobacterium tuberculosis 
CCDC5180]
 gi|344219771|gb|AEN00402.1| hypothetical protein MTCTRI2_1982 [Mycobacterium tuberculosis 
CTRI-2]
Length=300

 Score = 99.8 bits (247),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 71/135 (53%), Positives = 92/135 (69%), Gaps = 11/135 (8%)

Query  72   LRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQ  131
            +R+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSVTDT+T++  A QAAR AQ
Sbjct  1    MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ  60

Query  132  AQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPV-------VAHSA---VQ  181
            AQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P+       V H+    + 
Sbjct  61   AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH  120

Query  182  LVD-FFKQDGPTPPP  195
             VD  +KQD P+P P
Sbjct  121  AVDRSWKQDPPSPMP  135


>gi|31793141|ref|NP_855634.1| hypothetical protein Mb1984c [Mycobacterium bovis AF2122/97]
 gi|121637854|ref|YP_978077.1| hypothetical protein BCG_1988c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224990338|ref|YP_002645025.1| hypothetical protein JTY_1972 [Mycobacterium bovis BCG str. Tokyo 
172]
 16 more sequence titles
 
gi|289443430|ref|ZP_06433174.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447565|ref|ZP_06437309.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289574632|ref|ZP_06454859.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289750532|ref|ZP_06509910.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754045|ref|ZP_06513423.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|339632001|ref|YP_004723643.1| hypothetical protein MAF_19720 [Mycobacterium africanum GM041182]
 gi|31618732|emb|CAD94686.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493501|emb|CAL71975.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773451|dbj|BAH26257.1| hypothetical protein JTY_1972 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289416349|gb|EFD13589.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420523|gb|EFD17724.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289539063|gb|EFD43641.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289691119|gb|EFD58548.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694632|gb|EFD62061.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|339331357|emb|CCC27042.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601881|emb|CCC64555.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=300

 Score = 99.8 bits (247),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 71/135 (53%), Positives = 92/135 (69%), Gaps = 11/135 (8%)

Query  72   LRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQ  131
            +R+A+ +AR GAGTI AAQRRV+YAV+DA +AGFNV EDLSVTDT+T++  A QAAR AQ
Sbjct  1    MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ  60

Query  132  AQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPV-------VAHSA---VQ  181
            AQALAGDIR R  QL+  E+EV+ ++A  T  +  V F   P+       V H+    + 
Sbjct  61   AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH  120

Query  182  LVD-FFKQDGPTPPP  195
             VD  +KQD P+P P
Sbjct  121  AVDRSWKQDPPSPMP  135


>gi|118464287|ref|YP_882469.1| hypothetical protein MAV_3287 [Mycobacterium avium 104]
 gi|118165574|gb|ABK66471.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=232

 Score = 94.0 bits (232),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 61/143 (43%), Positives = 81/143 (57%), Gaps = 4/143 (2%)

Query  26   TADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFSTVSGIADQLRRAATIARNGAGT  85
            T DRW + F +    + +I W G G + LR RT AD   VS + DQL  AA +AR GA  
Sbjct  3    TRDRWYEAFTETWKDSLSIGWQGNGAEALRSRTYADKVKVSDMVDQLHEAARVARAGATD  62

Query  86   IDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQAQALAGDIRLRVGQ  145
            + AA+ R+  AV DA +AGF V EDLSVTD  T   +A +A R A+A+A A DI  R   
Sbjct  63   LSAARSRMRNAVVDAHEAGFYVHEDLSVTDLSTGNSSADRAIREAEAEAYAADIHQRAAD  122

Query  146  LVAAE----NEVSGQLAATTGDV  164
            L+ A+    + +S  +A   G V
Sbjct  123  LIRADVRTADRISNAMAGLNGQV  145


>gi|118469187|ref|YP_889834.1| hypothetical protein MSMEG_5600 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118170474|gb|ABK71370.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=383

 Score = 93.6 bits (231),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 63/186 (34%), Positives = 87/186 (47%), Gaps = 4/186 (2%)

Query  6    SQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHA---IAWNGAGGDGLRQRTRADF  62
            S+I +W T HL +A   W  TA   E  F Q+R    A     W G   D   +R   + 
Sbjct  17   SRIESWDTTHLENATARWRATATELEGHFEQLRQHVLAPGGTEWEGDAKDAALERATQNL  76

Query  63   STVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPA  122
            +TV    D  R AA +A N +  I AA+R  + ++ DA+  GF V EDLSV DT      
Sbjct  77   NTVRAAGDIARSAADLAENSSADISAAKRDALQSISDAEADGFEVNEDLSVRDTSRVD-V  135

Query  123  AVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAVQL  182
            +  AAR   A+  A +I+    QL+A +  +  +L A   ++  VRF   P     A   
Sbjct  136  STMAARYTAAREHAENIQWNANQLLATDTLIGRRLTAKAAELNGVRFDDEPEGTIRAASF  195

Query  183  VDFFKQ  188
             D FKQ
Sbjct  196  GDGFKQ  201


>gi|15609087|ref|NP_216466.1| hypothetical protein Rv1950c [Mycobacterium tuberculosis H37Rv]
 gi|15841421|ref|NP_336458.1| hypothetical protein MT2000 [Mycobacterium tuberculosis CDC1551]
 gi|31793142|ref|NP_855635.1| hypothetical protein Mb1985c [Mycobacterium bovis AF2122/97]
 62 more sequence titles
 
gi|121637855|ref|YP_978078.1| hypothetical protein BCG_1989c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148661758|ref|YP_001283281.1| hypothetical protein MRA_1960 [Mycobacterium tuberculosis H37Ra]
 gi|148823162|ref|YP_001287916.1| hypothetical protein TBFG_11979 [Mycobacterium tuberculosis F11]
 gi|167970534|ref|ZP_02552811.1| hypothetical protein MtubH3_21873 [Mycobacterium tuberculosis 
H37Ra]
 gi|224990339|ref|YP_002645026.1| hypothetical protein JTY_1973 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253799003|ref|YP_003032004.1| hypothetical protein TBMG_02042 [Mycobacterium tuberculosis KZN 
1435]
 gi|254232121|ref|ZP_04925448.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254550969|ref|ZP_05141416.1| hypothetical protein Mtube_10991 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289443431|ref|ZP_06433175.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447566|ref|ZP_06437310.1| transmembrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554274|ref|ZP_06443484.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570037|ref|ZP_06450264.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289746112|ref|ZP_06505490.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289754046|ref|ZP_06513424.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758059|ref|ZP_06517437.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762104|ref|ZP_06521482.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294996871|ref|ZP_06802562.1| hypothetical protein Mtub2_20793 [Mycobacterium tuberculosis 
210]
 gi|297634518|ref|ZP_06952298.1| hypothetical protein MtubK4_10366 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731506|ref|ZP_06960624.1| hypothetical protein MtubKR_10471 [Mycobacterium tuberculosis 
KZN R506]
 gi|306779963|ref|ZP_07418300.1| hypothetical protein TMBG_00485 [Mycobacterium tuberculosis SUMu002]
 gi|306784712|ref|ZP_07423034.1| hypothetical protein TMCG_00034 [Mycobacterium tuberculosis SUMu003]
 gi|306789069|ref|ZP_07427391.1| hypothetical protein TMDG_02771 [Mycobacterium tuberculosis SUMu004]
 gi|306793404|ref|ZP_07431706.1| hypothetical protein TMEG_01844 [Mycobacterium tuberculosis SUMu005]
 gi|306803668|ref|ZP_07440336.1| hypothetical protein TMHG_01127 [Mycobacterium tuberculosis SUMu008]
 gi|306808242|ref|ZP_07444910.1| hypothetical protein TMGG_00494 [Mycobacterium tuberculosis SUMu007]
 gi|306968065|ref|ZP_07480726.1| hypothetical protein TMIG_00603 [Mycobacterium tuberculosis SUMu009]
 gi|306972290|ref|ZP_07484951.1| hypothetical protein TMJG_00198 [Mycobacterium tuberculosis SUMu010]
 gi|307084575|ref|ZP_07493688.1| hypothetical protein TMLG_01228 [Mycobacterium tuberculosis SUMu012]
 gi|313658839|ref|ZP_07815719.1| hypothetical protein MtubKV_10481 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632002|ref|YP_004723644.1| hypothetical protein MAF_19730 [Mycobacterium africanum GM041182]
 gi|1806212|emb|CAB06511.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13881659|gb|AAK46272.1| hypothetical protein MT2000 [Mycobacterium tuberculosis CDC1551]
 gi|31618733|emb|CAD94687.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493502|emb|CAL71976.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124601180|gb|EAY60190.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148505910|gb|ABQ73719.1| hypothetical protein MRA_1960 [Mycobacterium tuberculosis H37Ra]
 gi|148721689|gb|ABR06314.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224773452|dbj|BAH26258.1| hypothetical protein JTY_1973 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253320506|gb|ACT25109.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289416350|gb|EFD13590.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420524|gb|EFD17725.1| transmembrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438906|gb|EFD21399.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289543791|gb|EFD47439.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686640|gb|EFD54128.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
 gi|289694633|gb|EFD62062.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289709610|gb|EFD73626.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713623|gb|EFD77635.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308327117|gb|EFP15968.1| hypothetical protein TMBG_00485 [Mycobacterium tuberculosis SUMu002]
 gi|308330553|gb|EFP19404.1| hypothetical protein TMCG_00034 [Mycobacterium tuberculosis SUMu003]
 gi|308334387|gb|EFP23238.1| hypothetical protein TMDG_02771 [Mycobacterium tuberculosis SUMu004]
 gi|308338183|gb|EFP27034.1| hypothetical protein TMEG_01844 [Mycobacterium tuberculosis SUMu005]
 gi|308345367|gb|EFP34218.1| hypothetical protein TMGG_00494 [Mycobacterium tuberculosis SUMu007]
 gi|308349670|gb|EFP38521.1| hypothetical protein TMHG_01127 [Mycobacterium tuberculosis SUMu008]
 gi|308354299|gb|EFP43150.1| hypothetical protein TMIG_00603 [Mycobacterium tuberculosis SUMu009]
 gi|308358241|gb|EFP47092.1| hypothetical protein TMJG_00198 [Mycobacterium tuberculosis SUMu010]
 gi|308365827|gb|EFP54678.1| hypothetical protein TMLG_01228 [Mycobacterium tuberculosis SUMu012]
 gi|323719514|gb|EGB28640.1| hypothetical protein TMMG_01210 [Mycobacterium tuberculosis CDC1551A]
 gi|326903556|gb|EGE50489.1| hypothetical protein TBPG_01432 [Mycobacterium tuberculosis W-148]
 gi|328458758|gb|AEB04181.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339331358|emb|CCC27043.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601882|emb|CCC64556.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344219772|gb|AEN00403.1| hypothetical protein MTCTRI2_1983 [Mycobacterium tuberculosis 
CTRI-2]
Length=63

 Score = 89.7 bits (221),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 39/53 (74%), Positives = 45/53 (85%), Gaps = 0/53 (0%)

Query  1   MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDG  53
           ML TLS I AW TEHLI+AA YWT+ AD+WEDVFL+MRN++H IAW GAGGDG
Sbjct  1   MLPTLSHIHAWDTEHLIEAAYYWTKVADQWEDVFLEMRNRSHFIAWEGAGGDG  53


>gi|298525444|ref|ZP_07012853.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495238|gb|EFI30532.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=63

 Score = 87.4 bits (215),  Expect = 3e-15, Method: Composition-based stats.
 Identities = 38/53 (72%), Positives = 44/53 (84%), Gaps = 0/53 (0%)

Query  1   MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDG  53
           ML TLS I AW TEHLI+AA YWT+ AD+WEDVFL+MRN++H IAW GA GDG
Sbjct  1   MLPTLSHIHAWDTEHLIEAAYYWTKVADQWEDVFLEMRNRSHFIAWEGASGDG  53


>gi|254775594|ref|ZP_05217110.1| hypothetical protein MaviaA2_13128 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=298

 Score = 84.3 bits (207),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 88/150 (59%), Gaps = 11/150 (7%)

Query  58   TRADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTK  117
            T  D    SG+ADQLR AA +AR+GA  + AA+ RV YAVEDA  +GF+V ED+SV D  
Sbjct  5    THDDAGKTSGVADQLRAAAGVARSGASELVAARSRVRYAVEDAMRSGFDVYEDMSVADRS  64

Query  118  TTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVV--  175
            T   AA +AAR AQAQA AGDIR R  +LVA + +V+G++ A T  + +  F   P    
Sbjct  65   TGGSAAQRAARQAQAQAFAGDIRRRAAELVALDQQVAGRVTAATAGIRDT-FPQTPDSDA  123

Query  176  --AHSAVQLVDF--FKQDGPTPPPPGAPHP  201
                   Q VD   FK+D    PPP   +P
Sbjct  124  PQRKPKFQAVDHHTFKED----PPPNGSYP  149


>gi|289574633|ref|ZP_06454860.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|289539064|gb|EFD43642.1| transmembrane protein [Mycobacterium tuberculosis K85]
Length=63

 Score = 84.0 bits (206),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 38/53 (72%), Positives = 44/53 (84%), Gaps = 0/53 (0%)

Query  1   MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDG  53
           ML TLS I AW TEHLI+AA YWT+ AD+ EDVFL+MRN++H IAW GAGGDG
Sbjct  1   MLPTLSHIHAWDTEHLIEAAYYWTKVADQGEDVFLEMRNRSHFIAWEGAGGDG  53


>gi|240173425|ref|ZP_04752083.1| putative transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=44

 Score = 80.1 bits (196),  Expect = 4e-13, Method: Composition-based stats.
 Identities = 33/43 (77%), Positives = 41/43 (96%), Gaps = 0/43 (0%)

Query  2   LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAI  44
           +ATLSQ+R WST+HLI+AAGYWT+TAD+WEDVFLQMRNQ+H +
Sbjct  1   MATLSQVRTWSTQHLIEAAGYWTKTADQWEDVFLQMRNQSHTL  43


>gi|118616854|ref|YP_905186.1| hypothetical protein MUL_1133 [Mycobacterium ulcerans Agy99]
 gi|118568964|gb|ABL03715.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=314

 Score = 79.7 bits (195),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 58/113 (52%), Positives = 72/113 (64%), Gaps = 0/113 (0%)

Query  54   LRQRTRADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSV  113
            +R  T AD  T S   DQL+ AA +ARNGA  + AA+ RV YAV DAQ AGF V EDLSV
Sbjct  1    MRAATHADLQTTSAAVDQLQEAARVARNGASDLYAARSRVRYAVTDAQAAGFQVEEDLSV  60

Query  114  TDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGN  166
            TD  T   AA +AAR AQAQA AGD+  R  QLV  + +V+ ++ A    +G+
Sbjct  61   TDRMTGGSAAQRAARQAQAQAFAGDLPQRAAQLVGLDAQVATKVTAAVAGIGS  113


>gi|145222562|ref|YP_001133240.1| hypothetical protein Mflv_1972 [Mycobacterium gilvum PYR-GCK]
 gi|145215048|gb|ABP44452.1| hypothetical protein Mflv_1972 [Mycobacterium gilvum PYR-GCK]
Length=653

 Score = 78.6 bits (192),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 61/173 (36%), Positives = 79/173 (46%), Gaps = 4/173 (2%)

Query  2    LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQA---HAIAWNGAGGDGLRQRT  58
            + + S++ +W T  L  AA  W    D  E  F Q R         AW G   D    R 
Sbjct  1    MPSRSEVESWETADLDAAASRWRTAGDVLESAFEQHRQNILTPGGTAWEGDAKDAALDRV  60

Query  59   RADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKT  118
             AD S V    D  R AA IA  G+  I  A+ RV+ A+ +A+   F VGEDLSVTD + 
Sbjct  61   TADTSVVRRQGDVHRVAADIAARGSEDIQGARSRVLEAIAEAEQDDFTVGEDLSVTDNRA  120

Query  119  TQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAG  171
                   A   A  +  A  IR RV QLVA +  +  QL A   ++  +RF G
Sbjct  121  YDLETAAARMTAATEH-AEFIRWRVEQLVATDALIGQQLQANAAELEGIRFEG  172


>gi|118468163|ref|YP_889699.1| hypothetical protein MSMEG_5460 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169450|gb|ABK70346.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=184

 Score = 76.3 bits (186),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 58/169 (35%), Positives = 84/169 (50%), Gaps = 4/169 (2%)

Query  4    TLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHA---IAWNGAGGDGLRQRTRA  60
            T SQI  W T HL DAA  W + A + E++F   R    A     W+G  G+   +R  A
Sbjct  15   TRSQIENWDTSHLDDAAMRWRQMAAQSEELFEWHRQNVAAPGGSEWSGNAGEVALERVTA  74

Query  61   DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ  120
            D + V    D  R AA IA +G+  I  +  +V+ A+  A+  GF VGEDLSV DT+   
Sbjct  75   DAALVRQQGDIQREAANIAEDGSRDIRRSVNQVLEAIAAAEADGFRVGEDLSVRDTRRID  134

Query  121  PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRF  169
             A + A R   ++  A DIR    +LV A+  +  +L     ++  + F
Sbjct  135  VATM-AKRFTASREHAEDIRWHAERLVQADIYLGQRLEMKALELDEIMF  182


>gi|118462425|ref|YP_879781.1| hypothetical protein MAV_0500 [Mycobacterium avium 104]
 gi|118163712|gb|ABK64609.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=468

 Score = 75.9 bits (185),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 52/172 (31%), Positives = 78/172 (46%), Gaps = 4/172 (2%)

Query  2    LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRN---QAHAIAWNGAGGDGLRQRT  58
            L TLS++RA + +HL   A  W      WE  F ++ N   +     W GAG +  + R 
Sbjct  4    LPTLSEVRAANWDHLRTNAAAWRSLGRTWESAFTEVHNASLRPGGTDWTGAGAEAFQDRA  63

Query  59   RADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKT  118
              D   +   AD     A IA  GA   D  +R ++  V++ +   F VGED SVTD  T
Sbjct  64   YLDLVKIRHPADITDTVAGIAERGADAQDGNKRSILDTVDEVEGDNFQVGEDWSVTDRIT  123

Query  119  TQPAAVQAARLAQ-AQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRF  169
               +A +  +  Q AQ     +  +V +LV  E ++S  L   + D+    F
Sbjct  124  WYSSAAELEQREQAAQEHRSFLMSKVYKLVGDEADISRNLTTASADLHGFSF  175


>gi|183980508|ref|YP_001848799.1| hypothetical protein MMAR_0479 [Mycobacterium marinum M]
 gi|183173834|gb|ACC38944.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=98

 Score = 72.4 bits (176),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 3/50 (6%)

Query  1   MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAG  50
           M+ TLSQ+RAWST HLI+A  YWT+TAD+WEDVFLQMR   H +A +G G
Sbjct  1   MVPTLSQVRAWSTGHLIEATSYWTQTADQWEDVFLQMR---HEVASHGPG  47


>gi|118616851|ref|YP_905183.1| hypothetical protein MUL_1130 [Mycobacterium ulcerans Agy99]
 gi|118568961|gb|ABL03712.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=98

 Score = 72.4 bits (176),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 3/50 (6%)

Query  1   MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAG  50
           M+ TLSQ+RAWST HLI+A  YWT+TAD+WEDVFLQMR   H +A +G G
Sbjct  1   MVPTLSQVRAWSTGHLIEATSYWTQTADQWEDVFLQMR---HEVASHGPG  47


>gi|169627124|ref|YP_001700773.1| hypothetical protein MAB_0016 [Mycobacterium abscessus ATCC 19977]
 gi|169239091|emb|CAM60119.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=515

 Score = 72.0 bits (175),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 45/170 (27%), Positives = 79/170 (47%), Gaps = 1/170 (0%)

Query  2    LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRAD  61
            + T S+I  W T+HL  AA  W + A + +      +     +  +G   +  R R ++ 
Sbjct  1    MPTKSEILNWRTDHLGAAAKTWGDQATQLDTAVNGAQGLLDGLRGSGQFVEAFRTRLKSY  60

Query  62   FSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQP  121
                    D+L+ A  +A +    +  A+ + +YAV D +D  FNV EDLSVT+ + +  
Sbjct  61   IDKTRPKVDKLKSAKQVAESSEQQLKGAKDKAVYAVHDPEDEDFNVNEDLSVTE-RRSHS  119

Query  122  AAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAG  171
               +  R  + + L G +  R  +LVA +N ++ +L     D+ N    G
Sbjct  120  GLDRLKRAIRRRWLQGILHTRAQELVATDNAIARKLHEIAQDLSNFHLEG  169


>gi|120406653|ref|YP_956482.1| hypothetical protein Mvan_5711 [Mycobacterium vanbaalenii PYR-1]
 gi|119959471|gb|ABM16476.1| hypothetical protein Mvan_5711 [Mycobacterium vanbaalenii PYR-1]
Length=266

 Score = 71.2 bits (173),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 56/178 (32%), Positives = 81/178 (46%), Gaps = 9/178 (5%)

Query  2    LATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQA---HAIAWNGAGGDGLRQRT  58
            L TLSQI  W T HL  AA  WT  A+ WE  F  + +     H   W GA     + R 
Sbjct  8    LPTLSQIENWETAHLACAARRWTAAAEHWESSFGLIADGVRSPHGTQWEGAAQAAAQARA  67

Query  59   RADFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKT  118
             +D + V  +AD+LR AA  A +G   I+AA+   +  +      GF V +DL+V +   
Sbjct  68   DSDLAGVRMLADRLRTAARTAVDGGSAIEAAKHEALTVIAATNAMGFEVADDLTVWNRMG  127

Query  119  TQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVA  176
                   A R   A+ L   +R    QL A ++ V+ +L + T     +     PV+A
Sbjct  128  A------ALRRNDAELLGISVRTGAAQLAAVDHAVATELDSVTAGFDALNIGEGPVIA  179


>gi|31793724|ref|NP_856217.1| hypothetical protein Mb2571 [Mycobacterium bovis AF2122/97]
 gi|121638426|ref|YP_978650.1| hypothetical protein BCG_2564 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148823737|ref|YP_001288491.1| hypothetical protein TBFG_12562 [Mycobacterium tuberculosis F11]
 54 more sequence titles
 
gi|224990920|ref|YP_002645607.1| hypothetical protein JTY_2558 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798378|ref|YP_003031379.1| hypothetical protein TBMG_01431 [Mycobacterium tuberculosis KZN 
1435]
 gi|254366746|ref|ZP_04982789.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289444077|ref|ZP_06433821.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448190|ref|ZP_06437934.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553669|ref|ZP_06442879.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570706|ref|ZP_06450933.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575247|ref|ZP_06455474.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746335|ref|ZP_06505713.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751160|ref|ZP_06510538.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754657|ref|ZP_06514035.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758671|ref|ZP_06518049.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762710|ref|ZP_06522088.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994348|ref|ZP_06800039.1| hypothetical protein Mtub2_07488 [Mycobacterium tuberculosis 
210]
 gi|297635152|ref|ZP_06952932.1| hypothetical protein MtubK4_13570 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732144|ref|ZP_06961262.1| hypothetical protein MtubKR_13695 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526015|ref|ZP_07013424.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776817|ref|ZP_07415154.1| hypothetical protein TMAG_02346 [Mycobacterium tuberculosis SUMu001]
 gi|306789943|ref|ZP_07428265.1| hypothetical protein TMDG_00255 [Mycobacterium tuberculosis SUMu004]
 gi|306794024|ref|ZP_07432326.1| hypothetical protein TMEG_03217 [Mycobacterium tuberculosis SUMu005]
 gi|306798422|ref|ZP_07436724.1| hypothetical protein TMFG_03769 [Mycobacterium tuberculosis SUMu006]
 gi|307080641|ref|ZP_07489811.1| hypothetical protein TMKG_02970 [Mycobacterium tuberculosis SUMu011]
 gi|313659478|ref|ZP_07816358.1| hypothetical protein MtubKV_13709 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632569|ref|YP_004724211.1| hypothetical protein MAF_25580 [Mycobacterium africanum GM041182]
 gi|31619318|emb|CAD94756.1| CONSERVED HYPOTHETICAL PROTEIN [SECOND PART] [Mycobacterium bovis 
AF2122/97]
 gi|121494074|emb|CAL72552.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134152257|gb|EBA44302.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148722264|gb|ABR06889.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774033|dbj|BAH26839.1| hypothetical protein JTY_2558 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253319881|gb|ACT24484.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289416996|gb|EFD14236.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421148|gb|EFD18349.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438301|gb|EFD20794.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289539678|gb|EFD44256.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544460|gb|EFD48108.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686863|gb|EFD54351.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691747|gb|EFD59176.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695244|gb|EFD62673.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710216|gb|EFD74232.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289714235|gb|EFD78247.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298495809|gb|EFI31103.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214744|gb|EFO74143.1| hypothetical protein TMAG_02346 [Mycobacterium tuberculosis SUMu001]
 gi|308333553|gb|EFP22404.1| hypothetical protein TMDG_00255 [Mycobacterium tuberculosis SUMu004]
 gi|308337581|gb|EFP26432.1| hypothetical protein TMEG_03217 [Mycobacterium tuberculosis SUMu005]
 gi|308341245|gb|EFP30096.1| hypothetical protein TMFG_03769 [Mycobacterium tuberculosis SUMu006]
 gi|308361562|gb|EFP50413.1| hypothetical protein TMKG_02970 [Mycobacterium tuberculosis SUMu011]
 gi|323718813|gb|EGB27969.1| hypothetical protein TMMG_02551 [Mycobacterium tuberculosis CDC1551A]
 gi|326904157|gb|EGE51090.1| hypothetical protein TBPG_02050 [Mycobacterium tuberculosis W-148]
 gi|328458148|gb|AEB03571.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339295421|gb|AEJ47532.1| hypothetical protein CCDC5079_2342 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299041|gb|AEJ51151.1| hypothetical protein CCDC5180_2314 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339331925|emb|CCC27628.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341602464|emb|CCC65140.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344220370|gb|AEN01001.1| hypothetical protein MTCTRI2_2591 [Mycobacterium tuberculosis 
CTRI-2]
Length=403

 Score = 67.8 bits (164),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 46/110 (42%), Positives = 62/110 (57%), Gaps = 8/110 (7%)

Query  93   VMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENE  152
            ++ AV DA+  GF VGED +VTD  T      +AARL QAQ  A  IR RVG L+A + +
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRD  60

Query  153  VSGQLAATTGDVGNVRFAGAPVV---AHSAVQLVDFFKQDGPTPPPPGAP  199
            ++ +++A T  +  + F   P V   A   VQ VDF +      PPPGAP
Sbjct  61   IATRVSAATQGLDELAFEDVPGVDTPAEDGVQAVDFRQA-----PPPGAP  105


>gi|15609679|ref|NP_217058.1| hypothetical protein Rv2542 [Mycobacterium tuberculosis H37Rv]
 gi|148662380|ref|YP_001283903.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
 gi|167968850|ref|ZP_02551127.1| hypothetical protein MtubH3_12785 [Mycobacterium tuberculosis 
H37Ra]
 gi|1781060|emb|CAB06196.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506532|gb|ABQ74341.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
Length=403

 Score = 67.8 bits (164),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 46/110 (42%), Positives = 62/110 (57%), Gaps = 8/110 (7%)

Query  93   VMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENE  152
            ++ AV DA+  GF VGED +VTD  T      +AARL QAQ  A  IR RVG L+A + +
Sbjct  1    MLDAVSDARRDGFAVGEDYTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRD  60

Query  153  VSGQLAATTGDVGNVRFAGAPVV---AHSAVQLVDFFKQDGPTPPPPGAP  199
            ++ +++A T  +  + F   P V   A   VQ VDF +      PPPGAP
Sbjct  61   IATRVSAATQGLDELAFEDVPGVDTPAEDGVQAVDFRQA-----PPPGAP  105



Lambda     K      H
   0.316    0.130    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 570943570224


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40