BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2081c Length=146 Score E Sequences producing significant alignments: (Bits) Value gi|15841574|ref|NP_336611.1| hypothetical protein MT2143 [Mycoba... 280 4e-74 gi|15609218|ref|NP_216597.1| transmembrane protein [Mycobacteriu... 280 5e-74 gi|289570194|ref|ZP_06450421.1| LOW QUALITY PROTEIN: transmembra... 196 8e-49 gi|339632117|ref|YP_004723759.1| hypothetical protein MAF_20950 ... 196 9e-49 gi|31793264|ref|NP_855757.1| transmembrane protein [Mycobacteriu... 196 1e-48 gi|289443587|ref|ZP_06433331.1| LOW QUALITY PROTEIN: transmembra... 196 1e-48 gi|224990460|ref|YP_002645147.1| putative transmembrane protein ... 196 1e-48 gi|289574762|ref|ZP_06454989.1| transmembrane protein [Mycobacte... 195 2e-48 gi|289554134|ref|ZP_06443344.1| transmembrane protein [Mycobacte... 195 2e-48 gi|289754192|ref|ZP_06513570.1| transmembrane protein [Mycobacte... 194 2e-48 gi|289745356|ref|ZP_06504734.1| transmembrane protein [Mycobacte... 194 5e-48 gi|121637966|ref|YP_978190.1| putative transmembrane protein [My... 134 3e-30 gi|340627093|ref|YP_004745545.1| putative transmembrane protein ... 128 3e-28 gi|148823297|ref|YP_001288051.1| hypothetical protein TBFG_12118... 90.1 9e-17 gi|253798860|ref|YP_003031861.1| hypothetical protein TBMG_01900... 81.6 4e-14 gi|240173510|ref|ZP_04752168.1| hypothetical protein MkanA1_2963... 44.3 0.005 gi|336459793|gb|EGO38707.1| hypothetical protein MAPs_46840 [Myc... 39.7 0.14 gi|333992421|ref|YP_004525035.1| hypothetical protein JDM601_378... 34.3 5.4 >gi|15841574|ref|NP_336611.1| hypothetical protein MT2143 [Mycobacterium tuberculosis CDC1551] gi|13881821|gb|AAK46425.1| hypothetical protein MT2143 [Mycobacterium tuberculosis CDC1551] Length=150 Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 5 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 64 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVGHPRKAIAAAVSVHS 120 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVGHPRKAIAAAVSVHS Sbjct 65 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVGHPRKAIAAAVSVHS 124 Query 121 TCMPAAFGGHLGLGDRSRSVSLSGTP 146 TCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 125 TCMPAAFGGHLGLGDRSRSVSLSGTP 150 >gi|15609218|ref|NP_216597.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|148661897|ref|YP_001283420.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|254364893|ref|ZP_04980939.1| hypothetical transmembrane protein [Mycobacterium tuberculosis str. Haarlem] 7 more sequence titles Length=146 Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVGHPRKAIAAAVSVHS 120 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVGHPRKAIAAAVSVHS Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVGHPRKAIAAAVSVHS 120 Query 121 TCMPAAFGGHLGLGDRSRSVSLSGTP 146 TCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 121 TCMPAAFGGHLGLGDRSRSVSLSGTP 146 >gi|289570194|ref|ZP_06450421.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T17] gi|289543948|gb|EFD47596.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T17] Length=103 Score = 196 bits (499), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 >gi|339632117|ref|YP_004723759.1| hypothetical protein MAF_20950 [Mycobacterium africanum GM041182] gi|339331473|emb|CCC27165.1| putative transmembrane protein [Mycobacterium africanum GM041182] Length=147 Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 >gi|31793264|ref|NP_855757.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|31618856|emb|CAD96960.1| POSSIBLE TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=147 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 140/147 (96%), Positives = 140/147 (96%), Gaps = 1/147 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV-GVHCPVVGGGGVGHPRKAIAAAVSVH 119 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV V GGGGVGHPRKAIAAAVSVH Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGGVGHPRKAIAAAVSVH 120 Query 120 STCMPAAFGGHLGLGDRSRSVSLSGTP 146 STCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 121 STCMPAAFGGHLGLGDRSRSVSLSGTP 147 >gi|289443587|ref|ZP_06433331.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T46] gi|289416506|gb|EFD13746.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T46] Length=146 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 >gi|224990460|ref|YP_002645147.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224773573|dbj|BAH26379.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] Length=148 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 139/148 (94%), Positives = 139/148 (94%), Gaps = 2/148 (1%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV--GVHCPVVGGGGVGHPRKAIAAAVSV 118 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV GGGGVGHPRKAIAAAVSV Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGGGVGHPRKAIAAAVSV 120 Query 119 HSTCMPAAFGGHLGLGDRSRSVSLSGTP 146 HSTCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 121 HSTCMPAAFGGHLGLGDRSRSVSLSGTP 148 >gi|289574762|ref|ZP_06454989.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289750677|ref|ZP_06510055.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289539193|gb|EFD43771.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289691264|gb|EFD58693.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=203 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 5 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 64 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG Sbjct 65 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 107 >gi|289554134|ref|ZP_06443344.1| transmembrane protein [Mycobacterium tuberculosis KZN 605] gi|289438766|gb|EFD21259.1| transmembrane protein [Mycobacterium tuberculosis KZN 605] gi|328458618|gb|AEB04041.1| transmembrane protein [Mycobacterium tuberculosis KZN 4207] Length=150 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 140/150 (94%), Positives = 140/150 (94%), Gaps = 4/150 (2%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV----GVHCPVVGGGGVGHPRKAIAAAV 116 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV V GGGGVGHPRKAIAAAV Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGGGGGVGHPRKAIAAAV 120 Query 117 SVHSTCMPAAFGGHLGLGDRSRSVSLSGTP 146 SVHSTCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 121 SVHSTCMPAAFGGHLGLGDRSRSVSLSGTP 150 >gi|289754192|ref|ZP_06513570.1| transmembrane protein [Mycobacterium tuberculosis EAS054] gi|289694779|gb|EFD62208.1| transmembrane protein [Mycobacterium tuberculosis EAS054] Length=199 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 >gi|289745356|ref|ZP_06504734.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289685884|gb|EFD53372.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] Length=201 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/106 (99%), Positives = 104/106 (99%), Gaps = 0/106 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGGGVG 106 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGG G G Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGWGGG 106 >gi|121637966|ref|YP_978190.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493614|emb|CAL72088.1| Possible transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341602004|emb|CCC64678.1| possible transmembrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=203 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%) Query 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT Sbjct 1 MFANAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSAT 60 Query 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV 93 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV Sbjct 61 IKAAAPSTTAAIATLATAANGQLRERGGAGGWV 93 >gi|340627093|ref|YP_004745545.1| putative transmembrane protein [Mycobacterium canettii CIPT 140010059] gi|340005283|emb|CCC44438.1| putative transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=224 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 91/100 (91%), Positives = 93/100 (93%), Gaps = 1/100 (1%) Query 4 NAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSAVVPAAVAGPLFVGRVSATIKA 63 +A LSP+V IWTARAASLYTSHNFWCAAAVS AVYVGSAVVPAAVAGPLFVGRVSATIKA Sbjct 40 SAWLSPWVCIWTARAASLYTSHNFWCAAAVSVAVYVGSAVVPAAVAGPLFVGRVSATIKA 99 Query 64 AAPSTTAAIATLATAANGQLRERGGAGGWVGVHCPVVGGG 103 AAPSTTAAIATLATAANGQL E GA GWVGVHCPVVGGG Sbjct 100 AAPSTTAAIATLATAANGQLCEPAGA-GWVGVHCPVVGGG 138 >gi|148823297|ref|YP_001288051.1| hypothetical protein TBFG_12118 [Mycobacterium tuberculosis F11] gi|289758200|ref|ZP_06517578.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|148721824|gb|ABR06449.1| hypothetical transmembrane protein [Mycobacterium tuberculosis F11] gi|289713764|gb|EFD77776.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=149 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%) Query 102 GGGVGHPRKAIAAAVSVHSTCMPAAFGGHLGLGDRSRSVSLSGTP 146 GGGVGHPRKAIAAAVSVHSTCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 105 GGGVGHPRKAIAAAVSVHSTCMPAAFGGHLGLGDRSRSVSLSGTP 149 >gi|253798860|ref|YP_003031861.1| hypothetical protein TBMG_01900 [Mycobacterium tuberculosis KZN 1435] gi|253320363|gb|ACT24966.1| transmembrane protein [Mycobacterium tuberculosis KZN 1435] Length=157 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 40/40 (100%), Positives = 40/40 (100%), Gaps = 0/40 (0%) Query 107 HPRKAIAAAVSVHSTCMPAAFGGHLGLGDRSRSVSLSGTP 146 HPRKAIAAAVSVHSTCMPAAFGGHLGLGDRSRSVSLSGTP Sbjct 118 HPRKAIAAAVSVHSTCMPAAFGGHLGLGDRSRSVSLSGTP 157 >gi|240173510|ref|ZP_04752168.1| hypothetical protein MkanA1_29636 [Mycobacterium kansasii ATCC 12478] Length=54 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/52 (70%), Positives = 38/52 (74%), Gaps = 0/52 (0%) Query 36 AVYVGSAVVPAAVAGPLFVGRVSATIKAAAPSTTAAIATLATAANGQLRERG 87 AVYVG AVV A AG L VGRV ATIKAAA ST A + A AA+GQLRERG Sbjct 1 AVYVGDAVVAGAAAGLLDVGRVKATIKAAALSTMATMPMPAKAASGQLRERG 52 >gi|336459793|gb|EGO38707.1| hypothetical protein MAPs_46840 [Mycobacterium avium subsp. paratuberculosis S397] Length=237 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/26 (66%), Positives = 20/26 (77%), Gaps = 0/26 (0%) Query 2 FANAGLSPFVAIWTARAASLYTSHNF 27 FA + PFV+I TARAA+LY SHNF Sbjct 212 FARSEFLPFVSICTARAANLYVSHNF 237 >gi|333992421|ref|YP_004525035.1| hypothetical protein JDM601_3781 [Mycobacterium sp. JDM601] gi|333488389|gb|AEF37781.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=81 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 27/67 (41%), Positives = 35/67 (53%), Gaps = 5/67 (7%) Query 4 NAGLSPFVAIWTARAASLYTSHNFWCAAAVSAAVYVGSA----VVPAAVAGPLFVGRVSA 59 AG P V + +A A L T H WC+ A+ YV S+ +V A G L VG + Sbjct 11 RAGGHPMVPVGSAHADGL-TPHPDWCSGALMGKRYVDSSGAEVLVTRAGIGTLGVGVTAM 69 Query 60 TIKAAAP 66 T+KAAAP Sbjct 70 TLKAAAP 76 Lambda K H 0.319 0.130 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127605758688 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40