BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2102

Length=238
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841593|ref|NP_336630.1|  hypothetical protein MT2162 [Mycoba...   482    2e-134
gi|15609239|ref|NP_216618.1|  hypothetical protein Rv2102 [Mycoba...   481    5e-134
gi|307084749|ref|ZP_07493862.1|  hypothetical protein TMLG_03595 ...   480    9e-134
gi|340627114|ref|YP_004745566.1|  hypothetical protein MCAN_21281...   427    5e-118
gi|317126524|ref|YP_004100636.1|  hypothetical protein Intca_3429...   306    2e-81 
gi|260906270|ref|ZP_05914592.1|  hypothetical protein BlinB_13161...   259    3e-67 
gi|254364912|ref|ZP_04980958.1|  conserved hypothetical protein [...   243    2e-62 
gi|308178506|ref|YP_003917912.1|  zinc finger domain-containing p...   241    5e-62 
gi|331697416|ref|YP_004333655.1|  hypothetical protein Psed_3631 ...   229    3e-58 
gi|134098192|ref|YP_001103853.1|  hypothetical protein SACE_1608 ...   218    5e-55 
gi|325000734|ref|ZP_08121846.1|  hypothetical protein PseP1_18282...   216    3e-54 
gi|52549976|gb|AAU83825.1|  conserved hypothetical protein [uncul...   204    1e-50 
gi|268324618|emb|CBH38206.1|  conserved hypothetical protein [unc...   197    1e-48 
gi|145595876|ref|YP_001160173.1|  zinc finger SWIM domain-contain...   192    3e-47 
gi|159039138|ref|YP_001538391.1|  zinc finger SWIM domain-contain...   191    6e-47 
gi|330469459|ref|YP_004407202.1|  zinc finger SWIM domain-contain...   191    7e-47 
gi|330506406|ref|YP_004382834.1|  zinc finger, swim domain-contai...   187    1e-45 
gi|302869122|ref|YP_003837759.1|  hypothetical protein Micau_4672...   182    3e-44 
gi|315504406|ref|YP_004083293.1|  zinc finger swim domain-contain...   182    4e-44 
gi|238060400|ref|ZP_04605109.1|  zinc finger protein [Micromonosp...   179    3e-43 
gi|147921751|ref|YP_684427.1|  hypothetical protein LRC72 [uncult...   177    2e-42 
gi|333977795|ref|YP_004515740.1|  hypothetical protein Desku_0308...   172    4e-41 
gi|298242054|ref|ZP_06965861.1|  zinc finger SWIM domain protein ...   171    7e-41 
gi|332799947|ref|YP_004461446.1|  hypothetical protein TepRe1_201...   170    1e-40 
gi|21227582|ref|NP_633504.1|  hypothetical protein MM_1480 [Metha...   169    3e-40 
gi|20089088|ref|NP_615163.1|  hypothetical protein MA0190 [Methan...   167    1e-39 
gi|300785423|ref|YP_003765714.1|  hypothetical protein AMED_3526 ...   166    4e-39 
gi|257075449|ref|ZP_05569810.1|  hypothetical protein Faci_00225 ...   164    9e-39 
gi|309790428|ref|ZP_07684990.1|  hypothetical protein OSCT_0941 [...   162    3e-38 
gi|225593134|gb|ACN96052.1|  conserved protein with SWIM Zn-finge...   161    7e-38 
gi|119510050|ref|ZP_01629190.1|  SWIM Zn-finger [Nodularia spumig...   160    1e-37 
gi|22299848|ref|NP_683095.1|  hypothetical protein tlr2305 [Therm...   160    2e-37 
gi|256375188|ref|YP_003098848.1|  hypothetical protein Amir_1046 ...   159    2e-37 
gi|186683770|ref|YP_001866966.1|  zinc finger SWIM domain-contain...   159    3e-37 
gi|37521836|ref|NP_925213.1|  hypothetical protein glr2267 [Gloeo...   159    4e-37 
gi|119357049|ref|YP_911693.1|  zinc finger SWIM domain-containing...   157    9e-37 
gi|303245901|ref|ZP_07332183.1|  zinc finger SWIM domain protein ...   157    1e-36 
gi|194335232|ref|YP_002017026.1|  zinc finger SWIM domain-contain...   157    2e-36 
gi|298490376|ref|YP_003720553.1|  zinc finger SWIM domain-contain...   156    2e-36 
gi|209526887|ref|ZP_03275406.1|  zinc finger SWIM domain protein ...   155    3e-36 
gi|16332104|ref|NP_442832.1|  hypothetical protein slr1429 [Synec...   155    5e-36 
gi|75906973|ref|YP_321269.1|  SWIM Zn-finger [Anabaena variabilis...   155    6e-36 
gi|158338675|ref|YP_001519852.1|  SWIM zinc finger domain-contain...   154    1e-35 
gi|17231647|ref|NP_488195.1|  hypothetical protein all4155 [Nosto...   153    2e-35 
gi|334119520|ref|ZP_08493606.1|  zinc finger SWIM domain-containi...   152    3e-35 
gi|78186765|ref|YP_374808.1|  hypothetical protein Plut_0903 [Chl...   152    3e-35 
gi|282899416|ref|ZP_06307383.1|  SWIM Zn-finger [Cylindrospermops...   152    3e-35 
gi|307154012|ref|YP_003889396.1|  zinc finger SWIM domain-contain...   152    5e-35 
gi|119489574|ref|ZP_01622334.1|  hypothetical protein L8106_08196...   151    7e-35 
gi|113474327|ref|YP_720388.1|  SWIM-type zinc finger protein [Tri...   151    7e-35 


>gi|15841593|ref|NP_336630.1| hypothetical protein MT2162 [Mycobacterium tuberculosis CDC1551]
 gi|148823315|ref|YP_001288069.1| hypothetical protein TBFG_12136 [Mycobacterium tuberculosis F11]
 gi|167966814|ref|ZP_02549091.1| hypothetical protein MtubH3_01595 [Mycobacterium tuberculosis 
H37Ra]
 40 more sequence titles
 Length=277

 Score =  482 bits (1240),  Expect = 2e-134, Method: Compositional matrix adjust.
 Identities = 238/238 (100%), Positives = 238/238 (100%), Gaps = 0/238 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA
Sbjct  40   VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  99

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL
Sbjct  100  HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  159

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD
Sbjct  160  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  219

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG  238
            RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG
Sbjct  220  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG  277


>gi|15609239|ref|NP_216618.1| hypothetical protein Rv2102 [Mycobacterium tuberculosis H37Rv]
 gi|31793284|ref|NP_855777.1| hypothetical protein Mb2128 [Mycobacterium bovis AF2122/97]
 gi|121637986|ref|YP_978210.1| hypothetical protein BCG_2121 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 31 more sequence titles
 Length=238

 Score =  481 bits (1237),  Expect = 5e-134, Method: Compositional matrix adjust.
 Identities = 237/238 (99%), Positives = 238/238 (100%), Gaps = 0/238 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +LEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA
Sbjct  1    MLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL
Sbjct  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD
Sbjct  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG  238
            RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG
Sbjct  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG  238


>gi|307084749|ref|ZP_07493862.1| hypothetical protein TMLG_03595 [Mycobacterium tuberculosis SUMu012]
 gi|308365679|gb|EFP54530.1| hypothetical protein TMLG_03595 [Mycobacterium tuberculosis SUMu012]
Length=276

 Score =  480 bits (1235),  Expect = 9e-134, Method: Compositional matrix adjust.
 Identities = 237/237 (100%), Positives = 237/237 (100%), Gaps = 0/237 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA
Sbjct  40   VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  99

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL
Sbjct  100  HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  159

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD
Sbjct  160  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  219

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAG  237
            RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAG
Sbjct  220  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAG  276


>gi|340627114|ref|YP_004745566.1| hypothetical protein MCAN_21281 [Mycobacterium canettii CIPT 
140010059]
 gi|340005304|emb|CCC44460.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=237

 Score =  427 bits (1099),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 233/238 (98%), Positives = 236/238 (99%), Gaps = 1/238 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +LEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA
Sbjct  1    MLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            HVERTLAENAWYAAKLLSGEMP+DIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL
Sbjct  61   HVERTLAENAWYAAKLLSGEMPDDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AATFYLLAESFD+DPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD
Sbjct  121  AATFYLLAESFDDDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG  238
            RYYARQADINVPSPPATPS  LLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG
Sbjct  181  RYYARQADINVPSPPATPSM-LLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG  237


>gi|317126524|ref|YP_004100636.1| hypothetical protein Intca_3429 [Intrasporangium calvum DSM 43043]
 gi|315590612|gb|ADU49909.1| hypothetical protein Intca_3429 [Intrasporangium calvum DSM 43043]
Length=274

 Score =  306 bits (784),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 153/227 (68%), Positives = 183/227 (81%), Gaps = 1/227 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE +G+  RLQRGR+YARKGQV+S+ VDAG+VTALVQGSRARPYR+RIGI AFGK++WA
Sbjct  38   VLEGMGMSGRLQRGRTYARKGQVLSVDVDAGVVTALVQGSRARPYRVRIGITAFGKAEWA  97

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +ER LA +AWY A+LL+GEMPEDIE+VF G+GLSLFP  AR+LSLDC+CPD+ VPCKHL
Sbjct  98   AIERDLAGHAWYLARLLAGEMPEDIEEVFRGIGLSLFPAQARDLSLDCTCPDWEVPCKHL  157

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AATFYLLAE+FD+DPF ILAWRGR RE+LL NL AAR+D    AAD A   A PL D LD
Sbjct  158  AATFYLLAEAFDDDPFRILAWRGRAREELLDNLRAARSDQPPGAADSAPSGA-PLEDLLD  216

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYH  227
             Y++ Q  +     P++ +TALLDQLP   ++ RGR LTELLRPAY 
Sbjct  217  SYFSVQGRLPRTLAPSSSTTALLDQLPPVDVTVRGRALTELLRPAYE  263


>gi|260906270|ref|ZP_05914592.1| hypothetical protein BlinB_13161 [Brevibacterium linens BL2]
Length=265

 Score =  259 bits (661),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 130/232 (57%), Positives = 169/232 (73%), Gaps = 12/232 (5%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE +G+G RL RGR+YAR+GQV+ + +DAGLV A VQGSRARPYR+RIG+ A+GK++WA
Sbjct  43   VLEGMGMGTRLTRGRNYARRGQVLDIDLDAGLVNATVQGSRARPYRVRIGLRAYGKAEWA  102

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +E  + E+AW+ A+LLSG+MP DIE +F  +GL+LFP    EL+LDCSCPD AVPCKH+
Sbjct  103  SIEERMNEDAWFVAQLLSGQMPADIEKLFDDVGLTLFP-IKGELTLDCSCPDSAVPCKHV  161

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANL-AAARADGAAPAADHAEQVAQPLTDCL  179
            AA  YLLAE FDEDPF ILAWRGREREDLL +L   + A+ +AP          PLT+ L
Sbjct  162  AAVVYLLAEQFDEDPFRILAWRGREREDLLEHLHTGSTAENSAPV---------PLTELL  212

Query  180  DRYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTH  231
            D +Y + A I  P P  T + ++L+Q+P   ++ R +PL E+LRPAY AL  
Sbjct  213  DAFYFQPAQIVPPRPLGT-AVSVLEQVPPIDVTVRKQPLAEVLRPAYEALAE  263


>gi|254364912|ref|ZP_04980958.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134150426|gb|EBA42471.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=156

 Score =  243 bits (619),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 143/151 (95%), Positives = 143/151 (95%), Gaps = 0/151 (0%)

Query  88   VFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAATFYLLAESFDEDPFAILAWRGRERE  147
            V A  G     GTARELSLDCSCPDYAVPCKHLAATFYLLAESFDEDPFAILAWRGRERE
Sbjct  6    VLARFGQLPGTGTARELSLDCSCPDYAVPCKHLAATFYLLAESFDEDPFAILAWRGRERE  65

Query  148  DLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTALLDQLP  207
            DLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTALLDQLP
Sbjct  66   DLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTALLDQLP  125

Query  208  DTGLSARGRPLTELLRPAYHALTHHHNSAGG  238
            DTGLSARGRPLTELLRPAYHALTHHHNSAGG
Sbjct  126  DTGLSARGRPLTELLRPAYHALTHHHNSAGG  156


>gi|308178506|ref|YP_003917912.1| zinc finger domain-containing protein [Arthrobacter arilaitensis 
Re117]
 gi|307745969|emb|CBT76941.1| zinc finger domain-containing protein [Arthrobacter arilaitensis 
Re117]
Length=274

 Score =  241 bits (616),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 123/234 (53%), Positives = 156/234 (67%), Gaps = 2/234 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+  G+G+RLQRGR+YARKGQVISL +  GLV A VQGS  RPY ++I +  F  +QW 
Sbjct  42   ILDGFGMGSRLQRGRAYARKGQVISLDITPGLVAARVQGSTPRPYSVQISLGIFRDAQWE  101

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V++ L ++AW+ A LL G+MPEDIE VF   GLSLFP + RELSL CSCPD AVPCKHL
Sbjct  102  QVQQILNQDAWFVASLLDGQMPEDIERVFEAAGLSLFPASRRELSLSCSCPDSAVPCKHL  161

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVA-QPLTDCL  179
            AA FYLLAE FDEDPF+ILAWRGR+RE LL +L     D        AEQ A  PL + L
Sbjct  162  AAAFYLLAERFDEDPFSILAWRGRDRESLLGSLHPIGQDTKTADGGTAEQEAGTPLEEAL  221

Query  180  DRYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHH  233
            + +Y +   +      A  +  L+DQLP +G++ R   L ++LRP Y AL  + 
Sbjct  222  EGFY-QSGPMPAGRSEALGTALLIDQLPSSGVTVRSMALEDVLRPIYRALRENR  274


>gi|331697416|ref|YP_004333655.1| hypothetical protein Psed_3631 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326952105|gb|AEA25802.1| hypothetical protein Psed_3631 [Pseudonocardia dioxanivorans 
CB1190]
Length=288

 Score =  229 bits (583),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/240 (55%), Positives = 162/240 (68%), Gaps = 13/240 (5%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE +  G RL RGRSYAR GQ + ++VD G VTA VQGSR  PYR+RIG+  +GK +WA
Sbjct  47   VLESLVAGGRLARGRSYARAGQTLDMRVDPGSVTATVQGSRPEPYRVRIGVTTYGKPEWA  106

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             VE  LA +AWYAA LL+G MP +IE +FA LGL+LFP   R+L +DCSCPD+AVPCKHL
Sbjct  107  RVEEALAADAWYAATLLAGSMPPEIEGLFATLGLALFPADGRDLVMDCSCPDHAVPCKHL  166

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA-----DGAAPAADHAEQ-VAQP  174
            AA FYLLAE FD DPF +LA RGR+RE LLANL + RA     D   PA   AE+  A P
Sbjct  167  AAVFYLLAERFDADPFEVLALRGRDRETLLANLRSRRAAVAAHDATGPAGPGAEEPAAPP  226

Query  175  LTDCLDRYYARQADIN-----VPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHAL  229
            L + LD ++A    ++     VP P  T   ALLDQ+P   ++ RG+ + +LLRP Y  L
Sbjct  227  LAEVLDDFFAAGPGLDDARRVVPVP--TAPDALLDQVPGFAIAVRGKKVADLLRPVYRTL  284


>gi|134098192|ref|YP_001103853.1| hypothetical protein SACE_1608 [Saccharopolyspora erythraea NRRL 
2338]
 gi|291009115|ref|ZP_06567088.1| hypothetical protein SeryN2_31734 [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133910815|emb|CAM00928.1| hypothetical protein SACE_1608 [Saccharopolyspora erythraea NRRL 
2338]
Length=270

 Score =  218 bits (555),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 123/229 (54%), Positives = 149/229 (66%), Gaps = 4/229 (1%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE  G+G RLQRG+ YAR GQV++L V   LV  LVQGSR  PYR+RIG+ AF  ++WA
Sbjct  38   VLESFGMGGRLQRGKRYARAGQVLNLSVSTSLVIGLVQGSRETPYRVRIGMKAFSPAEWA  97

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +E  LA  A +AAKLL+GEMP  IE  F  LGL LFP T RE+++DCSCPD+ +PCKHL
Sbjct  98   RIEEALAGQALFAAKLLAGEMPAGIEAEFERLGLRLFPDTMREMTMDCSCPDWEIPCKHL  157

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AA  YLLAESFDEDPF ILAWRGR RE+LL  L + R  G    A  AE  A PL + LD
Sbjct  158  AAACYLLAESFDEDPFQILAWRGRGREELLDRLRSLR--GTVAGAAPAEPQAPPLAESLD  215

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHAL  229
             ++        P+  +    ALLDQL    L+  G  + E LR AY A+
Sbjct  216  SFWTMPPVSTTPARESPRPDALLDQL--GPLAVEGVDVVEHLREAYRAM  262


>gi|325000734|ref|ZP_08121846.1| hypothetical protein PseP1_18282 [Pseudonocardia sp. P1]
Length=276

 Score =  216 bits (550),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 117/231 (51%), Positives = 147/231 (64%), Gaps = 2/231 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE +G+G RL RG++YAR GQ++S+ VDAG V ALVQG+R +PYR+RIG+  + K +W 
Sbjct  45   VLEQLGVGGRLSRGKTYARSGQIVSVDVDAGAVVALVQGTRPQPYRVRIGLRVWDKPEWR  104

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             VE  LA +AWYAA LL+G +P +IE++  GLGLSLFP    +LS DCSCPD  VPCKHL
Sbjct  105  RVEEALAGDAWYAAALLAGTVPPEIEELLDGLGLSLFPAAGTDLSQDCSCPDATVPCKHL  164

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AA FY+LAE  D DPF +L  RGR+R  LL  L   R   A  AA         L D   
Sbjct  165  AAVFYVLAERCDTDPFTLLTLRGRDRTALLERLREERDRAAGAAAPSGPAALADLLDGF-  223

Query  181  RYYARQADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTH  231
             + A       PSPP T   A+LDQ+P+  L A    LT++LRP Y A+T 
Sbjct  224  -WTAPAGGAAPPSPPETEPDAVLDQVPEPPLRAGRERLTDVLRPVYRAMTR  273


>gi|52549976|gb|AAU83825.1| conserved hypothetical protein [uncultured archaeon GZfos34A6]
Length=323

 Score =  204 bits (519),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 108/234 (47%), Positives = 142/234 (61%), Gaps = 7/234 (2%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   +G RL RGRSYARKGQV+S+ V  G+VTA VQG+R++PY +RI +    +  W 
Sbjct  65   VLESFNMGARLTRGRSYARKGQVVSIDVQKGIVTAKVQGTRSKPYSVRIQLNPISEHDWE  124

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V   +A  A +AA LLSGEMP DIED F+  GL+LFP +  EL+  CSCPD+A PCKH+
Sbjct  125  KVTEAMASKAIFAANLLSGEMPHDIEDAFSEAGLALFPSSKNELATKCSCPDWANPCKHI  184

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADG----AAPAADHAEQVAQPLT  176
            AA +YLLAE FDEDPF I   RGR +E+++A L   RA      A  +A ++ +   PL 
Sbjct  185  AAVYYLLAERFDEDPFLIFKLRGRTKEEIIAALRDKRASSAESEAKTSASYSGERVIPLA  244

Query  177  DCLDRYY-ARQADINVPSPPATP--STALLDQLPDTGLSARGRPLTELLRPAYH  227
            +CLD ++ A  A  +    P  P    A+L +L D   +     L  LL  AY 
Sbjct  245  ECLDSFWHAGDALDSFSVNPNRPEVENAILKRLGDAPFAIGKTNLASLLAKAYE  298


>gi|268324618|emb|CBH38206.1| conserved hypothetical protein [uncultured archaeon]
Length=301

 Score =  197 bits (500),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 104/234 (45%), Positives = 142/234 (61%), Gaps = 7/234 (2%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   +G RL RGRSYARKGQV+S+ V  G+VTA VQG+R++PY +RI +    ++ W 
Sbjct  43   VLESFDMGARLTRGRSYARKGQVVSIDVQKGIVTAKVQGTRSKPYSVRIQLNPISEADWE  102

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V   +A  A +AA LLSGEMP DIED F+  GL+LFP +   L+ +CSCPD+A PCKH+
Sbjct  103  KVTEAMASKAIFAANLLSGEMPHDIEDAFSEAGLALFPSSKNALATNCSCPDWANPCKHI  162

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAP----AADHAEQVAQPLT  176
            AA +YLLAE FDEDPF I   RG+ + +++  L   RA  A      +A +  +   PL+
Sbjct  163  AAVYYLLAERFDEDPFLIFKLRGQTKSEIIDALRDKRASSAESEAITSASYTGESVIPLS  222

Query  177  DCLDRYY-ARQADINVPSPPATP--STALLDQLPDTGLSARGRPLTELLRPAYH  227
            +CL+ ++ A  A  +    P  P    A+L +L D   +     LT LL  AY 
Sbjct  223  ECLESFWHAGDALDSFSVNPDRPEVENAILKRLGDAPFAIGKTNLTSLLAKAYE  276


>gi|145595876|ref|YP_001160173.1| zinc finger SWIM domain-containing protein [Salinispora tropica 
CNB-440]
 gi|145305213|gb|ABP55795.1| zinc finger, SWIM domain protein [Salinispora tropica CNB-440]
Length=304

 Score =  192 bits (488),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 117/254 (47%), Positives = 146/254 (58%), Gaps = 22/254 (8%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   LG RL RGRSYAR GQV+ L V  G VTA VQGSR+RPY +RI +  F  + WA
Sbjct  52   VLESFALGTRLTRGRSYARAGQVLRLDVTPGEVTAAVQGSRSRPYEVRITLAPFPATLWA  111

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             VE  LA  A+++A+LL+G++P ++E++F   G  LFP    EL   CSCPD AVPCKHL
Sbjct  112  RVEEELAAQAFFSARLLAGDLPAELEELFVAAGAPLFPVGLAELGQWCSCPDGAVPCKHL  171

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGA-------------APAADH  167
            AATFYLLAE+FD DPFA+L WRGR R++LL  L   R   A             AP    
Sbjct  172  AATFYLLAEAFDADPFALLHWRGRGRDELLDRLRVRRGGAAAVPERSDSDEVSSAPVTGA  231

Query  168  AEQVA----QPLTDCLDRYYARQADINVPSPPATPSTA---LLDQLPDTGLSARGRPLTE  220
            A  VA      L D +DR+++  + + +P  P T +T    LL QL     +  G  L E
Sbjct  232  ARSVAGLPPASLADAVDRFWS--SPVPLPDRPPTLATGTELLLRQLGAPAPAIGGPGLVE  289

Query  221  LLRPAYHALTHHHN  234
             LR AY  L     
Sbjct  290  RLRRAYRRLGEQGT  303


>gi|159039138|ref|YP_001538391.1| zinc finger SWIM domain-containing protein [Salinispora arenicola 
CNS-205]
 gi|157917973|gb|ABV99400.1| zinc finger SWIM domain protein [Salinispora arenicola CNS-205]
Length=302

 Score =  191 bits (486),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 114/245 (47%), Positives = 143/245 (59%), Gaps = 16/245 (6%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   LG RL RGRSYAR GQV+ L V  G VTA+VQGSR+RPY + I +  F  + W+
Sbjct  52   VLESFALGTRLTRGRSYARAGQVMRLDVAPGEVTAVVQGSRSRPYEVHITLATFPMALWS  111

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             VE  LA  A+++A+LL+G++P ++E++FA  G  LFP    EL   CSCPD AVPCKHL
Sbjct  112  RVEEDLATQAFFSARLLAGDLPAELEELFAAAGAPLFPAGMAELGQRCSCPDAAVPCKHL  171

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAA-----------PAADHAE  169
            AATFYLLAE+FD DPFA+L WRGR R++LL  L   R    A           P A  A 
Sbjct  172  AATFYLLAEAFDADPFALLHWRGRSRDELLDQLRVRRGTAVAVRSDSDSAPDLPVAGAAR  231

Query  170  QVAQ----PLTDCLDRYYARQADINVPSPP-ATPSTALLDQLPDTGLSARGRPLTELLRP  224
             VA     PL D + R+++    +    P   T +  LL QL     +  G  L E LR 
Sbjct  232  SVAGLPPVPLADAVHRFWSPPVPLPDRPPTLVTGTELLLRQLGAPAPTIGGPGLVERLRR  291

Query  225  AYHAL  229
            AY  L
Sbjct  292  AYRRL  296


>gi|330469459|ref|YP_004407202.1| zinc finger SWIM domain-containing protein [Verrucosispora maris 
AB-18-032]
 gi|328812430|gb|AEB46602.1| zinc finger SWIM domain-containing protein [Verrucosispora maris 
AB-18-032]
Length=293

 Score =  191 bits (485),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 90/165 (55%), Positives = 118/165 (72%), Gaps = 0/165 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   LG RL RGR+YAR GQV+ L +  G VT+ VQGSR RPY++ I +P F +  WA
Sbjct  47   VLESFALGTRLTRGRAYARAGQVVRLDIAPGTVTSTVQGSRPRPYQVHIALPVFPEQLWA  106

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +E  LA  A+++A+LL+G++P ++E++F  +G  LFP T  EL+  CSCPD AVPCKHL
Sbjct  107  RIEAELAGQAFFSARLLAGDLPAELEELFTAVGAPLFPATVTELAQRCSCPDAAVPCKHL  166

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAA  165
            AATFYLLAE+FD DPFA+L WRGR R+ LL  L   R  G+ P++
Sbjct  167  AATFYLLAEAFDADPFALLHWRGRSRDALLDRLRELRGTGSKPSS  211


>gi|330506406|ref|YP_004382834.1| zinc finger, swim domain-containing protein [Methanosaeta concilii 
GP6]
 gi|328927214|gb|AEB67016.1| zinc finger, swim domain protein [Methanosaeta concilii GP6]
Length=297

 Score =  187 bits (475),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 100/238 (43%), Positives = 141/238 (60%), Gaps = 12/238 (5%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
             LE   LG RL RG+SYARKGQVIS+ V+ G+V A VQG+ + PY + I +     ++W 
Sbjct  41   TLESFNLGARLTRGKSYARKGQVISIDVNPGIVRARVQGTGSEPYDVVIKLKPLSDAEWD  100

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
                T+A  A +AA+LL GEMP++IE+ F+  GLSLFP   R+L  DCSCPD++ PCKH+
Sbjct  101  KAASTMASKAVFAARLLGGEMPQNIEEAFSESGLSLFPSKGRDLKTDCSCPDWSNPCKHI  160

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAAR-------ADGAAPAADHAEQVAQ  173
            AA +YLLAE FD DPF I   RGR +E ++  +   R       ADG + ++  A +  +
Sbjct  161  AAVYYLLAEQFDCDPFLIFKLRGRSKEQIMEAMRKMRSAEAVEEADGISRSSQDAREQFK  220

Query  174  PLTDCLDRYYARQADINV----PSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYH  227
            PL +CLD Y+    ++++    P  P     A+L++L  +     G  L  LL  AY 
Sbjct  221  PLEECLDCYWRGGGELDLLEINPRAPDVKG-AVLERLGPSPFYIAGVNLAALLPKAYE  277


>gi|302869122|ref|YP_003837759.1| hypothetical protein Micau_4672 [Micromonospora aurantiaca ATCC 
27029]
 gi|302571981|gb|ADL48183.1| hypothetical protein Micau_4672 [Micromonospora aurantiaca ATCC 
27029]
Length=378

 Score =  182 bits (463),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 88/158 (56%), Positives = 112/158 (71%), Gaps = 0/158 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   LG+RL RGR+YAR+GQV+ L V  G VTA VQGSR RPY +RIG+ A+ +  W 
Sbjct  39   VLESFALGSRLTRGRAYARRGQVLRLDVSPGTVTAEVQGSRPRPYPVRIGLAAYPEETWR  98

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +E  LA  A+++A+LL+G++P ++E++FA  G  LFP    EL   C CPD+AVPCKHL
Sbjct  99   RIEAELAGQAFFSARLLAGDLPAELEELFAEAGAPLFPAAVGELDQRCGCPDFAVPCKHL  158

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA  158
            AATFYLLAE+FD DPF +L WRGR R +LL  L   R 
Sbjct  159  AATFYLLAEAFDADPFHLLHWRGRSRAELLDRLRTLRG  196


>gi|315504406|ref|YP_004083293.1| zinc finger swim domain-containing protein [Micromonospora sp. 
L5]
 gi|315411025|gb|ADU09142.1| zinc finger SWIM domain-containing protein [Micromonospora sp. 
L5]
Length=348

 Score =  182 bits (461),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 88/158 (56%), Positives = 112/158 (71%), Gaps = 0/158 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   LG+RL RGR+YAR+GQV+ L V  G VTA VQGSR RPY +RIG+ A+ +  W 
Sbjct  39   VLESFALGSRLTRGRAYARRGQVLRLDVSPGTVTAEVQGSRPRPYPVRIGLAAYPEETWR  98

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +E  LA  A+++A+LL+G++P ++E++FA  G  LFP    EL   C CPD+AVPCKHL
Sbjct  99   RIEAELAGQAFFSARLLAGDLPAELEELFAEAGAPLFPAAIGELDQRCGCPDFAVPCKHL  158

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA  158
            AATFYLLAE+FD DPF +L WRGR R +LL  L   R 
Sbjct  159  AATFYLLAEAFDADPFHLLHWRGRSRAELLDRLRTLRG  196


>gi|238060400|ref|ZP_04605109.1| zinc finger protein [Micromonospora sp. ATCC 39149]
 gi|237882211|gb|EEP71039.1| zinc finger protein [Micromonospora sp. ATCC 39149]
Length=347

 Score =  179 bits (454),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 85/148 (58%), Positives = 108/148 (73%), Gaps = 0/148 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE   LG RL RGRSYAR GQV+ L V  G+VTA VQGSR +PYR+RI +  F ++ W 
Sbjct  44   VLESFALGTRLTRGRSYARAGQVLDLDVAPGVVTARVQGSRPQPYRVRIALEPFPEALWD  103

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             VE  LA  A+++A+LL+G++P ++E++FA  G  LFP    EL   C+CPD+AVPCKHL
Sbjct  104  RVEAALAVQAFFSARLLAGDLPNELEELFAATGAPLFPADVAELDQRCNCPDFAVPCKHL  163

Query  121  AATFYLLAESFDEDPFAILAWRGRERED  148
            AATFYLLAE+FD DPF +L WRGR R +
Sbjct  164  AATFYLLAEAFDADPFELLHWRGRRRAE  191


>gi|147921751|ref|YP_684427.1| hypothetical protein LRC72 [uncultured methanogenic archaeon 
RC-I]
 gi|110619823|emb|CAJ35101.1| conserved hypothetical protein [uncultured methanogenic archaeon 
RC-I]
Length=301

 Score =  177 bits (448),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 81/158 (52%), Positives = 110/158 (70%), Gaps = 0/158 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VL+  G  NRL+RGR YAR GQV+ +++  G   A VQGSR++PY + I +  F   +W 
Sbjct  44   VLDSFGWTNRLERGRRYARAGQVLDIKIAQGKAVADVQGSRSKPYDVEIMLAPFSPEEWD  103

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +  +++  A ++AKLL+GEMPE+IED F+  G SLFP + +EL+ DCSCPDYA PCKH+
Sbjct  104  RIIDSMSAKAIFSAKLLAGEMPENIEDAFSEAGKSLFPTSPKELTTDCSCPDYANPCKHI  163

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA  158
            AA +Y+LAE FD+DPF I  +RG E+E LL  L   RA
Sbjct  164  AAVYYILAEEFDKDPFMIFRFRGMEKERLLEALRKKRA  201


>gi|333977795|ref|YP_004515740.1| hypothetical protein Desku_0308 [Desulfotomaculum kuznetsovii 
DSM 6115]
 gi|333821276|gb|AEG13939.1| hypothetical protein Desku_0308 [Desulfotomaculum kuznetsovii 
DSM 6115]
Length=272

 Score =  172 bits (436),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 92/205 (45%), Positives = 120/205 (59%), Gaps = 10/205 (4%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE  G   RL+RGR+YAR G V+ + +  G+V+A VQGSR RPYR+ I +      +W 
Sbjct  19   VLESFGWDTRLRRGRAYARAGNVLEIDIKPGVVSARVQGSRPRPYRVSIEVKTLSDREWE  78

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V   +A  A +AA LL+GEMP DIE+ F   GLSLFP +A ++  DCSCPD+A PCKH+
Sbjct  79   RVTGIMAGRAVFAALLLAGEMPRDIEEAFRQAGLSLFPRSAGDIRTDCSCPDWANPCKHI  138

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA------DGAAPAADHAEQVAQP  174
            AA +YLL E FDEDPF +   RGR RE L++ L   RA       G   A    E     
Sbjct  139  AAVYYLLGEKFDEDPFFLFLLRGRTREQLISALREKRAARVEQEQGEEIAPASPEPAGPS  198

Query  175  LTDCLDRYYARQADIN----VPSPP  195
            L   LDR++    ++     +P PP
Sbjct  199  LEGQLDRFWDEGEELAGLRFLPVPP  223


>gi|298242054|ref|ZP_06965861.1| zinc finger SWIM domain protein [Ktedonobacter racemifer DSM 
44963]
 gi|297555108|gb|EFH88972.1| zinc finger SWIM domain protein [Ktedonobacter racemifer DSM 
44963]
Length=308

 Score =  171 bits (433),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 100/241 (42%), Positives = 139/241 (58%), Gaps = 9/241 (3%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
             LE +G+G+RL RGRSYAR GQV++L+V AG VTA VQGS  RPY++ I +       W 
Sbjct  60   TLEALGIGSRLARGRSYARSGQVLALEVKAGCVTASVQGSSPRPYKVAIYLSPLSDQDWE  119

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            H+   +A++A  AA+LLSGEMP++IE +F    +SLFP  + +LS  CSCPD A PCKH+
Sbjct  120  HILDIMAQDALLAARLLSGEMPQEIEALFVRERISLFPEVSDDLSTSCSCPDPANPCKHI  179

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA--DGAAPAADH---AEQVA-QP  174
            AA +YLLAE FD DPF +   RGR +E +   L   R+  +  + A D    A+ V  QP
Sbjct  180  AAVYYLLAERFDSDPFMLFTLRGRSKEAVGEALQQRRSQVEELSQAEDFLLAAQPVPLQP  239

Query  175  LTDCLDRYYARQADIN--VPSPPATPS-TALLDQLPDTGLSARGRPLTELLRPAYHALTH  231
            L + LD ++    ++    P P   P  + +L +L D   +  G  LT      Y     
Sbjct  240  LEERLDTFWQEGEELEDFAPRPAQLPGPSPMLRELGDAPYTVVGENLTNWFERIYMKAAQ  299

Query  232  H  232
            +
Sbjct  300  Y  300


>gi|332799947|ref|YP_004461446.1| hypothetical protein TepRe1_2012 [Tepidanaerobacter sp. Re1]
 gi|332697682|gb|AEE92139.1| hypothetical protein TepRe1_2012 [Tepidanaerobacter sp. Re1]
Length=272

 Score =  170 bits (431),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 92/250 (37%), Positives = 136/250 (55%), Gaps = 26/250 (10%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +LE  G  NRL+RGR YAR G V+   ++ G +TA VQGSR+ PY++ I +    + +W 
Sbjct  19   ILESFGWANRLERGRRYARNGSVLEFHIEPGKITAKVQGSRSTPYKVTIKVVKLTRKEWQ  78

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V + L+  A YAAKLLSG+MPEDI  +F  +G+SL P    E+   CSCPD+AVPCKH+
Sbjct  79   TVLKHLSTKALYAAKLLSGDMPEDIAAIFQEVGISLLPADDSEIDARCSCPDFAVPCKHI  138

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAA--RADGAAPAADHAEQVAQPLTDC  178
            AA  Y++AE  D+DPF +   RG E+ED+L  L     R   +   +++    A+P T  
Sbjct  139  AAVHYIVAEELDKDPFLVFKLRGMEKEDVLNRLLKFDDRKRKSRNGSNNITAQAKPSTSL  198

Query  179  LD----RYYARQAD---------------INVPSPPATP---STALLDQLPDTGLSARGR  216
                    +A++ +               + V SPPA P   +TA  D        ++  
Sbjct  199  FSGTTASAFAKENNTAIAYSLEDFWSGKPLPVSSPPAAPFIHATAFADT--KNAFWSKDF  256

Query  217  PLTELLRPAY  226
            PL ++++  Y
Sbjct  257  PLAQIMQAIY  266


>gi|21227582|ref|NP_633504.1| hypothetical protein MM_1480 [Methanosarcina mazei Go1]
 gi|20905966|gb|AAM31176.1| conserved protein [Methanosarcina mazei Go1]
Length=312

 Score =  169 bits (428),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 89/198 (45%), Positives = 116/198 (59%), Gaps = 2/198 (1%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
             LE   LG RL RG+SYARKGQV S++++ GLV A VQGS  RPY + I +     S+W 
Sbjct  44   TLESFNLGARLSRGKSYARKGQVTSIKIETGLVRAKVQGSDPRPYSVTIKVRTLTGSEWD  103

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +   LA    +AAKLL+GEMPEDI+  F  +GLSLFP T  +L  DCSCPD++ PCKH+
Sbjct  104  LLAEKLALKPIFAAKLLAGEMPEDIDSAFKEIGLSLFPETLDDLETDCSCPDWSNPCKHI  163

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AA +YLL E FD DPF I   RG + +D ++ L        A     AE + +   D   
Sbjct  164  AAVYYLLGEEFDRDPFLIFKLRGVDMDDFMSILGKGFVPETADRVAEAEALTERTDDKTG  223

Query  181  RYYARQADINVPSPPATP  198
                 +A+I+  SP   P
Sbjct  224  T--VLEAEISPVSPEPLP  239


>gi|20089088|ref|NP_615163.1| hypothetical protein MA0190 [Methanosarcina acetivorans C2A]
 gi|19913950|gb|AAM03643.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length=315

 Score =  167 bits (423),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 78/154 (51%), Positives = 102/154 (67%), Gaps = 0/154 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
             LE   +G RL RG+SYARKGQV S++++ GLV A VQGS  +PY + I +     S+W 
Sbjct  47   TLESFNIGARLSRGKSYARKGQVTSIKIETGLVRAKVQGSDPKPYSVTIKVRTLTGSEWE  106

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             +   LA    +AAKLL+GEMPEDI+  F  +GLSLFP T  +L  DCSCPD++ PCKH+
Sbjct  107  LLAEKLALKPIFAAKLLAGEMPEDIDSAFKEIGLSLFPETLDDLETDCSCPDWSNPCKHI  166

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLA  154
            AA +YLL E FD DPF I   RG + +D ++ L 
Sbjct  167  AAVYYLLGEEFDRDPFLIFKLRGVDMDDFMSILG  200


>gi|300785423|ref|YP_003765714.1| hypothetical protein AMED_3526 [Amycolatopsis mediterranei U32]
 gi|299794937|gb|ADJ45312.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gi|340526867|gb|AEK42072.1| hypothetical protein RAM_17930 [Amycolatopsis mediterranei S699]
Length=243

 Score =  166 bits (419),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 101/226 (45%), Positives = 127/226 (57%), Gaps = 20/226 (8%)

Query  20   KGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAHVERTLAENAWYAAKLLSG  79
            +G+V+SL+V AG V A VQ    RPYR+RIG+ AFGK+ WA +   LA  A     LLSG
Sbjct  28   QGRVVSLEVGAGRVDAEVQD--GRPYRVRIGLTAFGKTDWAAITHALAAKASATVLLLSG  85

Query  80   EMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAATFYLLAESFDEDPFAIL  139
            E+P DIE+ F  + L LFP +ARE+SLDC+CP   VPC HL A F  L     +DPF IL
Sbjct  86   ELPRDIEETFTAVRLPLFPSSAREVSLDCTCPAAEVPCGHLNAVFSALLARVGDDPFTIL  145

Query  140  AWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSP-----  194
            A RGR RE LL  L   R   A P     +  +  LT+ +D ++A       P+P     
Sbjct  146  ALRGRNRETLLDEL-KNRLISAEPL--DPDDRSPALTEVMDTFFACG-----PAPGLGGA  197

Query  195  -----PATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNS  235
                 P T S ALLDQ P   ++  G  + ELLRP Y ALT  H +
Sbjct  198  APLQGPRTTSDALLDQAPPFAITVDGEDIAELLRPVYQALTGEHGA  243


>gi|257075449|ref|ZP_05569810.1| hypothetical protein Faci_00225 [Ferroplasma acidarmanus fer1]
Length=280

 Score =  164 bits (416),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 121/200 (61%), Gaps = 2/200 (1%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L   G   RLQRG+ YAR GQV+S+ +D+ +V+A VQGSR +PYRI I  P  G S W 
Sbjct  42   ILNSYGWETRLQRGKRYARVGQVLSVNIDSNVVSADVQGSRKKPYRISIEFPRLGDSAWE  101

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             + + +       A +L+GE+P ++E+ F   G SLFP +  E++++C+CPDYA+PCKH+
Sbjct  102  KIVKQIISTKGLVAGMLAGEVPSELENAFKQGGASLFPQSGDEINMNCTCPDYAIPCKHI  161

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
            AA FY+LA+  D+DPF +    G+ +E+L++ + +   DG  P      +      + L+
Sbjct  162  AAVFYILADRLDDDPFLLFELNGKRKEELISAI-SKNNDGNIPENKENNKDTSVAVEELN  220

Query  181  RYYARQADINVPSPPATPST  200
             ++ +  D+++P      +T
Sbjct  221  NFW-KPPDLHIPVENVRKNT  239


>gi|309790428|ref|ZP_07684990.1| hypothetical protein OSCT_0941 [Oscillochloris trichoides DG6]
 gi|308227541|gb|EFO81207.1| hypothetical protein OSCT_0941 [Oscillochloris trichoides DG6]
Length=307

 Score =  162 bits (411),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 73/150 (49%), Positives = 101/150 (68%), Gaps = 0/150 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +LE  G G RL RGR+YAR G V+++ +  G VTA VQGS+  PY++ + I     +QW 
Sbjct  54   ILEGFGYGTRLTRGRNYARNGAVLNIDITPGRVTARVQGSQRTPYKVTLSIAPLTDAQWR  113

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            H  + +AE A + AKLL+GEMP +IE+ FA   ++LFP  + +L   CSCPD+A PCKH+
Sbjct  114  HAIKAMAEQAIFTAKLLAGEMPHEIEEAFATARVALFPTRSGDLETSCSCPDFANPCKHI  173

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLL  150
            AA ++LL E FDEDPF I   RGR +E ++
Sbjct  174  AAVYFLLGERFDEDPFLIFELRGRTKEQII  203


>gi|225593134|gb|ACN96052.1| conserved protein with SWIM Zn-finger [Fischerella sp. MV11]
Length=278

 Score =  161 bits (408),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 70/169 (42%), Positives = 106/169 (63%), Gaps = 0/169 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+RGR+YAR+G V+S++     V A VQGS   PY++ + + +F   +W 
Sbjct  20   LLDSYRFKKRLERGRNYARQGNVLSIEFQGAKVLAKVQGSEPEPYKVSLSLDSFSDEEWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T+++ A +AAKLL+GEMP++IE VF   G+SLFP T  ++   C+CPD A PCKH+
Sbjct  80   YVVETMSQKAIFAAKLLAGEMPQNIEAVFTANGISLFPFTLSDVHSRCTCPDKANPCKHI  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAE  169
            AA +Y L + F EDPF +   RGR +E +++NL   R+       D  +
Sbjct  140  AAVYYQLGDRFSEDPFVLFQLRGRTKEQIISNLRQLRSTNIEVTTDQTQ  188


>gi|119510050|ref|ZP_01629190.1| SWIM Zn-finger [Nodularia spumigena CCY9414]
 gi|119465237|gb|EAW46134.1| SWIM Zn-finger [Nodularia spumigena CCY9414]
Length=278

 Score =  160 bits (406),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 108/176 (62%), Gaps = 0/176 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R+Y+R+G V++++     V A VQGS   PY++ + I  F + +W 
Sbjct  20   LLDSYRFKKRLERARNYSRQGNVLNIEFKGAKVLARVQGSEPEPYKVSLSIDHFTEEEWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T+++ A +AAKLL+GEMP++IE+VF   GLSLFP T  ++   CSCPD A PCKH+
Sbjct  80   YVIETMSQRAIFAAKLLAGEMPQNIEEVFTANGLSLFPFTLSDVHSKCSCPDKANPCKHI  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLT  176
             A +Y L + F EDPF +   RGR +E ++++L   R       A    ++ QP T
Sbjct  140  GAVYYQLGDRFSEDPFVLFQLRGRTKEQIISDLRQLRGAKVEVTAPETSEITQPTT  195


>gi|22299848|ref|NP_683095.1| hypothetical protein tlr2305 [Thermosynechococcus elongatus BP-1]
 gi|22296032|dbj|BAC09857.1| tlr2305 [Thermosynechococcus elongatus BP-1]
Length=323

 Score =  160 bits (404),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 73/164 (45%), Positives = 106/164 (65%), Gaps = 0/164 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE  G   RL+R R+Y R+G+V++L+     V A VQG+ A PY +++ + AF + QW 
Sbjct  66   VLESFGWRRRLERARNYVREGRVLTLEFKGNQVHAQVQGTAAEPYHVKLYLDAFSEEQWQ  125

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +    +A+ A+YAAKLL+GE+P  IE+VF   GLSLFP T  ++   C+CPD   PCKH+
Sbjct  126  YAIDGMAQKAFYAAKLLAGELPPSIEEVFTQAGLSLFPFTKFDIHSRCNCPDPVNPCKHI  185

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPA  164
             A +YLL +SF+EDPF +   RG+ +E++L  L   RA    P+
Sbjct  186  GAVYYLLGQSFNEDPFLLFQLRGKTKEEILQRLRHYRATATTPS  229


>gi|256375188|ref|YP_003098848.1| hypothetical protein Amir_1046 [Actinosynnema mirum DSM 43827]
 gi|255919491|gb|ACU35002.1| zinc finger SWIM domain protein [Actinosynnema mirum DSM 43827]
Length=328

 Score =  159 bits (403),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 100/243 (42%), Positives = 138/243 (57%), Gaps = 19/243 (7%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSR--ARPYRIRIGIPAFGKSQ  58
            VL   G+ + ++RGR   R G+V+S  V + LV ALV G R    P+R R+ +  F   +
Sbjct  93   VLGSFGMADAVKRGRVLVRGGRVMSFSVSSSLVVALVAGERDGQGPFRARVAVRRFDDGE  152

Query  59   WAHVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCK  118
            WA VE  LA  A + AKLL+G +P  +E+VF  LGLSL P ++REL +DCSCP + VPC+
Sbjct  153  WAAVEEALAGRAVFVAKLLAGTLPSGVEEVFGELGLSLLPRSSRELGMDCSCPAWEVPCE  212

Query  119  HLAATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDC  178
            HLAA   +LA + D+DPF +LAWRGRER++LL  L A+RA G        E+ A PL   
Sbjct  213  HLAAACQVLASALDDDPFTLLAWRGRERDELLDRLRASRAPG------DDERSAPPLAAA  266

Query  179  LDRYYAR---------QADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHAL  229
            LD ++ R         Q ++           A+LD+L +  L   GRP+  +LR  Y  L
Sbjct  267  LDSFWVRPPARAASAGQGELTGADVSGQRVDAVLDELGE--LLVDGRPVRPVLRELYRRL  324

Query  230  THH  232
               
Sbjct  325  PRR  327


>gi|186683770|ref|YP_001866966.1| zinc finger SWIM domain-containing protein [Nostoc punctiforme 
PCC 73102]
 gi|186466222|gb|ACC82023.1| zinc finger, SWIM domain protein [Nostoc punctiforme PCC 73102]
Length=278

 Score =  159 bits (403),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 106/175 (61%), Gaps = 0/175 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R+YAR+G V+S++     V A VQGS   PY++ + +  F   QW 
Sbjct  20   LLDSYRFKKRLERARNYARQGNVLSIEFKGAKVLARVQGSEVEPYKVSLSLEPFTDEQWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T+++ A +AAKLL+GEMP++IE+VF   GLS+FP T  ++   CSCPD A PCKH+
Sbjct  80   YVIETMSQRAIFAAKLLAGEMPQNIEEVFTANGLSIFPFTLADVQSKCSCPDKANPCKHI  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPL  175
             A +Y L + F EDPF +   RGR +E ++++L   R+    P       + Q +
Sbjct  140  GALYYQLGDRFSEDPFVLFQLRGRTKEQIISDLRQLRSTKIQPNTTETPDIQQSI  194


>gi|37521836|ref|NP_925213.1| hypothetical protein glr2267 [Gloeobacter violaceus PCC 7421]
 gi|35212835|dbj|BAC90208.1| glr2267 [Gloeobacter violaceus PCC 7421]
Length=274

 Score =  159 bits (401),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 79/169 (47%), Positives = 103/169 (61%), Gaps = 0/169 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE  G   RL RGR+YAR G V++++     V A VQG+   PY + + +  F   QW 
Sbjct  29   VLESFGWTQRLARGRNYARGGNVLAMEFQGSKVKAKVQGTAPVPYDVTLFLDRFSDEQWE  88

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V  TLA  A +AAKLL+GEMP++IE+ F   GLSLFP    ++   CSCPD A PCKH+
Sbjct  89   EVIETLAGRAIFAAKLLAGEMPQNIEEAFIASGLSLFPFNKWDIHSQCSCPDSANPCKHI  148

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAE  169
            AA +YL+ E FD+DPF + A RGR R  +L  L   R  GA   ++ AE
Sbjct  149  AAVYYLMGERFDQDPFVLFALRGRSRTQILQRLRELRGSGAPLQSEPAE  197


>gi|119357049|ref|YP_911693.1| zinc finger SWIM domain-containing protein [Chlorobium phaeobacteroides 
DSM 266]
 gi|119354398|gb|ABL65269.1| zinc finger, SWIM domain protein [Chlorobium phaeobacteroides 
DSM 266]
Length=323

 Score =  157 bits (398),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 83/202 (42%), Positives = 116/202 (58%), Gaps = 1/202 (0%)

Query  2    LEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAH  61
            LE     +RL RGR+YARKGQV  L V +  V+A VQGSR  PY++ + +  F K QW  
Sbjct  41   LERFNDSSRLARGRAYARKGQVTDLVVTSTGVSAKVQGSRKSPYKVILRLTPFSKEQWRR  100

Query  62   VERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLA  121
            +   L +   + A++L GEM E IE +    GLSLFP + REL   CSCPDYA PCKHLA
Sbjct  101  LIDMLIDKPIHLAQMLGGEMSESIEQLCNKEGLSLFPKSFRELETSCSCPDYANPCKHLA  160

Query  122  ATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDR  181
            A FYLLAE+FD DPF +   RG ++E L   L   + D  +      + +A+ L    + 
Sbjct  161  AVFYLLAEAFDRDPFLLFTLRGMDKEMLFKALGGNQ-DSVSEKKPKKKNLAESLPSDAEA  219

Query  182  YYARQADINVPSPPATPSTALL  203
            +++   D+    P   P+++ +
Sbjct  220  FWSSGGDVMSALPRQQPTSSAI  241


>gi|303245901|ref|ZP_07332183.1| zinc finger SWIM domain protein [Desulfovibrio fructosovorans 
JJ]
 gi|302492684|gb|EFL52552.1| zinc finger SWIM domain protein [Desulfovibrio fructosovorans 
JJ]
Length=290

 Score =  157 bits (397),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 82/212 (39%), Positives = 128/212 (61%), Gaps = 16/212 (7%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VL    LG RL RGRSYAR GQV+++++  G ++A+VQGSR++PY + I +     ++W+
Sbjct  41   VLSGFNLGARLARGRSYARSGQVLAVEIGVGAISAMVQGSRSKPYVVTIRVKTLSPAEWS  100

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V   L+    + A LL+G+MP+ +EDVF    +SLFP    +L  +CSCPD++ PCKH+
Sbjct  101  KVATVLSHETGHVAALLAGQMPQALEDVFKKAKVSLFPSRYEDLITECSCPDWSNPCKHI  160

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAAD-HAEQVA------Q  173
            AA ++L+AE FD DPF +   RG  R  L+  L   + +  AP A+ HA++        +
Sbjct  161  AAVYFLVAEEFDRDPFLLFKLRGMTRAGLIEMLQDVQVEDDAPQAEAHAQKSGSASSARE  220

Query  174  PL-TDCLDRYYARQA-------DINVPSPPAT  197
            PL  DC   ++ ++A       +I+VP+  A+
Sbjct  221  PLPVDC-GAFWGQEAHEDVTLGEISVPAVKAS  251


>gi|194335232|ref|YP_002017026.1| zinc finger SWIM domain-containing protein [Pelodictyon phaeoclathratiforme 
BU-1]
 gi|194307709|gb|ACF42409.1| zinc finger SWIM domain protein [Pelodictyon phaeoclathratiforme 
BU-1]
Length=294

 Score =  157 bits (396),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 78/168 (47%), Positives = 105/168 (63%), Gaps = 3/168 (1%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGL-VTALVQGSRARPYRIRIGIPAFGKSQW  59
             LE+  +G R+ RG+SYARKGQV  L + A   V A VQGSR RPY++ I +  + K Q 
Sbjct  42   TLENFDIGERITRGKSYARKGQVTDLVITAKKGVAAKVQGSRVRPYKVSITLTPYSKEQK  101

Query  60   AHVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKH  119
              + + L     Y A+LLSGEMPE++  VF   GL+LFP    +L+  CSCPDY+ PCKH
Sbjct  102  ELLAQKLTSKPIYIAQLLSGEMPENLARVFKTAGLALFPAKYNDLTTTCSCPDYSNPCKH  161

Query  120  LAATFYLLAESFDEDPFAILAWRGREREDLLANLAAAR--ADGAAPAA  165
            +AA  YL+AE+FD+DPF +   RG ++E+ L  +   R  A G  P A
Sbjct  162  IAAVVYLMAEAFDQDPFLLFTLRGIDKEEFLRKIGYKRQTATGDDPPA  209


>gi|298490376|ref|YP_003720553.1| zinc finger SWIM domain-containing protein ['Nostoc azollae' 
0708]
 gi|298232294|gb|ADI63430.1| zinc finger SWIM domain protein ['Nostoc azollae' 0708]
Length=283

 Score =  156 bits (395),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 114/189 (61%), Gaps = 8/189 (4%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R RSY R+G V+S++     V A VQGS A PY++ + + +F   +W 
Sbjct  20   LLDSYRFKKRLERARSYYRQGNVLSIEFKDAKVLAWVQGSEAEPYKVSLFLDSFSDEEWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T++  + +AAKLL+GEMP+ IE+VF   GLSLFP T  ++   CSCPD AVPCKH+
Sbjct  80   YVIETMSHKSVFAAKLLAGEMPQKIEEVFTSNGLSLFPFTLGDVHGKCSCPDKAVPCKHI  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
             A +Y L + F EDPF +   RGR +E ++++L   R++     A  +E+  Q      +
Sbjct  140  GAVYYQLGDHFSEDPFVLFQLRGRTKEQIISDLRNLRSNKNINLA--SERFIQ------E  191

Query  181  RYYARQADI  189
              Y RQ+ I
Sbjct  192  EKYTRQSSI  200


>gi|209526887|ref|ZP_03275406.1| zinc finger SWIM domain protein [Arthrospira maxima CS-328]
 gi|209492666|gb|EDZ93002.1| zinc finger SWIM domain protein [Arthrospira maxima CS-328]
Length=273

 Score =  155 bits (393),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 80/210 (39%), Positives = 120/210 (58%), Gaps = 8/210 (3%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L       RL+R R+YAR G V++++     V A VQG++A PY++ + + AF + +W 
Sbjct  20   ILNRYRFKKRLERARNYARPGNVLNIEFTGQRVLAQVQGTQAEPYQVELWLDAFTEEEWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  TL++ A ++AKLL+GEMP +IEDVFA  GL LFP    E+   CSCPD A PCKH+
Sbjct  80   YVIETLSQQAIFSAKLLAGEMPYNIEDVFAKNGLRLFPFNLDEVHSRCSCPDPANPCKHI  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVA-------Q  173
             A +Y+L + F EDPF +   RGR +E+++A L   R  G         +V+        
Sbjct  140  GAVYYMLGDRFSEDPFVLFQLRGRLKEEIIAKLRNIRGSGGGKKDRKTSKVSPSVKGYEP  199

Query  174  PLTDCLDRYYAR-QADINVPSPPATPSTAL  202
            P+     +Y  + ++ + V SPP    T L
Sbjct  200  PVVSEYWQYKQQLESSLVVISPPPGSETVL  229


>gi|16332104|ref|NP_442832.1| hypothetical protein slr1429 [Synechocystis sp. PCC 6803]
 gi|1653733|dbj|BAA18644.1| slr1429 [Synechocystis sp. PCC 6803]
 gi|339275201|dbj|BAK51688.1| hypothetical protein SYNGTS_2940 [Synechocystis sp. PCC 6803]
Length=289

 Score =  155 bits (392),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 76/157 (49%), Positives = 98/157 (63%), Gaps = 0/157 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R+YAR+G V+SLQ     +TALVQG+   PY++ +G+  F    W 
Sbjct  18   LLDSYRFKKRLERARNYAREGNVLSLQFVESKLTALVQGTEVDPYQVTLGLDCFSDEDWH  77

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  TLA+ A YAA+LL G MP  IE VF   GL+LFP T  E+   CSCPD A PCKH+
Sbjct  78   YVVATLAQQALYAAQLLGGAMPPSIEQVFVQNGLNLFPFTLGEVHSRCSCPDKANPCKHI  137

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAAR  157
             A +Y LA+ F EDPF I   RGR R +LL  L+  R
Sbjct  138  GAVYYQLADHFQEDPFVIFRLRGRSRSELLEQLSCYR  174


>gi|75906973|ref|YP_321269.1| SWIM Zn-finger [Anabaena variabilis ATCC 29413]
 gi|75700698|gb|ABA20374.1| SWIM Zn-finger [Anabaena variabilis ATCC 29413]
Length=277

 Score =  155 bits (391),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 79/210 (38%), Positives = 115/210 (55%), Gaps = 8/210 (3%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R Y+R+G V+S++     V A VQGS   PY++ + +  F   QW 
Sbjct  20   LLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGSEEEPYKVSLSLDPFSDEQWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T+++ A +AAKLL+GEMP++IE+VF   GLSLFP T  ++   CSCPD A PCKH+
Sbjct  80   YVIETMSQKAVFAAKLLAGEMPQNIEEVFTTNGLSLFPFTLSDVHSKCSCPDKANPCKHV  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLT----  176
             A +Y L + F EDPF +   RGR +E ++++L   R          A +  Q +T    
Sbjct  140  GAVYYQLGDRFSEDPFVLFQLRGRNKEKIISDLRQLRNAKIETKITAASEPQQQVTRTQS  199

Query  177  ----DCLDRYYARQADINVPSPPATPSTAL  202
                D   RY+       V   P+T  T L
Sbjct  200  NMKLDSCWRYHEPLESSLVVIAPSTSETVL  229


>gi|158338675|ref|YP_001519852.1| SWIM zinc finger domain-containing protein [Acaryochloris marina 
MBIC11017]
 gi|158308916|gb|ABW30533.1| SWIM zinc finger domain protein, putative [Acaryochloris marina 
MBIC11017]
Length=306

 Score =  154 bits (388),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 89/244 (37%), Positives = 138/244 (57%), Gaps = 15/244 (6%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            VLE  G   RL+R R+Y R+G+V+ L+ +   V A VQG+   PY++ + + +F   QW 
Sbjct  52   VLESFGWRRRLERARNYVREGRVLKLEFNGPKVVARVQGTAEDPYKVSLALDSFTDEQWG  111

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V   +++ A +AAKLL+GEMP++IE+ F   GLSLFP +  ++   CSCPD   PCKH+
Sbjct  112  FVIEEMSQRAIFAAKLLAGEMPQNIEEAFTASGLSLFPFSKFDIHSRCSCPDPVNPCKHI  171

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA------DGAAPAADHAEQVAQP  174
             A +YLL + F +DPF +L  RGR ++ ++ +L   R+      +G   ++D  +  A  
Sbjct  172  GAVYYLLGDYFSQDPFILLQLRGRTKQSIVEDLRQMRSAGSDLEEGELKSSDAPQSSAIK  231

Query  175  LTDCLDRYYARQAD--INVPSPPATPSTALLDQLPDTGLSARGR----PL-TELLRPAYH  227
            +     R Y +Q D  + V +PP T  T +LD L    LS  G+    PL ++ LR  Y 
Sbjct  232  VKADFWR-YDQQLDPSLVVITPPPTSET-VLDVLGPLPLSTEGKVGSDPLVSDCLRTIYQ  289

Query  228  ALTH  231
             ++ 
Sbjct  290  RVSQ  293


>gi|17231647|ref|NP_488195.1| hypothetical protein all4155 [Nostoc sp. PCC 7120]
 gi|17133290|dbj|BAB75854.1| all4155 [Nostoc sp. PCC 7120]
Length=278

 Score =  153 bits (387),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 68/157 (44%), Positives = 99/157 (64%), Gaps = 0/157 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R Y+R+G V+S++     V A VQGS   PY++ + +  F   QW 
Sbjct  21   LLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGSEEEPYKVSLSLDPFSDEQWG  80

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T+++ A +AAKLL+GEMP++IE+VF   GLSLFP T  ++   CSCPD A PCKH+
Sbjct  81   YVIETMSQKAVFAAKLLAGEMPQNIEEVFTSNGLSLFPFTLSDVHSKCSCPDKANPCKHV  140

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAAR  157
             A +Y L + F EDPF +   RGR +E ++ +L   R
Sbjct  141  GAVYYQLGDRFSEDPFVLFQLRGRNKEKIIRDLRQLR  177


>gi|334119520|ref|ZP_08493606.1| zinc finger SWIM domain-containing protein [Microcoleus vaginatus 
FGP-2]
 gi|333458308|gb|EGK86927.1| zinc finger SWIM domain-containing protein [Microcoleus vaginatus 
FGP-2]
Length=275

 Score =  152 bits (385),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 83/237 (36%), Positives = 127/237 (54%), Gaps = 9/237 (3%)

Query  7    LGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAHVERTL  66
               RL+RG  YAR+G+V+S++     V A+VQG+  +PY++ +G+       W +V   +
Sbjct  20   FKKRLERGWQYAREGKVLSIKFPNQEVIAIVQGTDPKPYQVSLGLDTLTDEDWDYVIENM  79

Query  67   AENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAATFYL  126
            ++ A ++AKLL+GEMP +IEDVFA  G +LFP +  ++   CSCPD   PCKH++A +YL
Sbjct  80   SQRAVFSAKLLAGEMPHNIEDVFAAAGKTLFPLSLSDIRSRCSCPDPKNPCKHISAVYYL  139

Query  127  LAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTD----CLDRY  182
            L + F EDPF +   RGR +E +L  L   R       +        P T+     +DR+
Sbjct  140  LGDRFSEDPFVLFQLRGRTKEQILTALRQRRGTQGEENSQLNSGENAPTTNPKLPKVDRF  199

Query  183  YAR----QADINVPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTHHHNS  235
            +      ++ + V  PP +  T +LD L    L+  G+       PA  AL  H N 
Sbjct  200  WEYNQQLESSLVVIVPPPSSET-VLDILGPIALATDGKGTASKSSPASDALKQHFNK  255


>gi|78186765|ref|YP_374808.1| hypothetical protein Plut_0903 [Chlorobium luteolum DSM 273]
 gi|78166667|gb|ABB23765.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length=292

 Score =  152 bits (385),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 110/189 (59%), Gaps = 0/189 (0%)

Query  2    LEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAH  61
            LE      RL RGR+YARKGQV  L V +  VTA VQGSR RPY + I +  + + ++  
Sbjct  41   LERFNDSARLARGRAYARKGQVTGLSVTSSGVTAKVQGSRTRPYSVSIRLTPYSEEEYQR  100

Query  62   VERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLA  121
            +   L       A++L  EMPE I  +    GL LFP + R++   CSCPD+AVPCKHLA
Sbjct  101  LLGVLGLQPVLVARMLGKEMPEAIAGICRKEGLPLFPASFRDIEASCSCPDHAVPCKHLA  160

Query  122  ATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDR  181
            A FYLLAE+FD DPF +   RG E++ L   L    +   AP +   +++A+PL    + 
Sbjct  161  AVFYLLAEAFDRDPFLLFTLRGVEKDALFKALGGTLSPEPAPESKRKKKIAEPLPPDPES  220

Query  182  YYARQADIN  190
            ++   AD++
Sbjct  221  FWHAAADLS  229


>gi|282899416|ref|ZP_06307383.1| SWIM Zn-finger [Cylindrospermopsis raciborskii CS-505]
 gi|281195680|gb|EFA70610.1| SWIM Zn-finger [Cylindrospermopsis raciborskii CS-505]
Length=294

 Score =  152 bits (385),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 66/158 (42%), Positives = 100/158 (64%), Gaps = 0/158 (0%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R+Y+R+G V+S++     V A V+GS   PY++ + +  F   +W+
Sbjct  33   LLDSYRFKKRLERARNYSRQGNVLSIEFQKSKVLARVKGSEVEPYQVSLSLDIFSDEEWS  92

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V   ++  + +AAKLL+GEMP++IEDVF   GLSLFP T  ++   CSCPD AVPCKH+
Sbjct  93   YVIENMSHKSLFAAKLLAGEMPQNIEDVFTSNGLSLFPFTLNDVHSQCSCPDPAVPCKHI  152

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARA  158
             A +Y L++   EDPF +   RGR RE ++ +L   R 
Sbjct  153  GAVYYQLSDRLSEDPFVLFELRGRSRERIIQDLRKLRG  190


>gi|307154012|ref|YP_003889396.1| zinc finger SWIM domain-containing protein [Cyanothece sp. PCC 
7822]
 gi|306984240|gb|ADN16121.1| zinc finger SWIM domain protein [Cyanothece sp. PCC 7822]
Length=286

 Score =  152 bits (383),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 75/180 (42%), Positives = 107/180 (60%), Gaps = 4/180 (2%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+RGR+YAR+G V+S+  +A    A VQGS   PY++ + +  F    W 
Sbjct  22   LLDSYRFKKRLERGRNYAREGNVLSIDFEAAQALAKVQGSEPDPYQVSLSMEPFTDEDWN  81

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
            +V  T++E A ++A+LL+G+MPE IE VF   GL+LFP T  ++   CSCPD A PCKH+
Sbjct  82   YVIDTMSEKAIFSAQLLAGQMPETIEQVFISNGLNLFPFTLSDVHSRCSCPDKANPCKHI  141

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAA----DHAEQVAQPLT  176
            AA +Y L + F EDPF I   RGR +  +L  L   R+ G   A+    +  EQ +Q  T
Sbjct  142  AAVYYQLGDRFSEDPFVIFQLRGRSKAQILEALRERRSQGTIKASSDTVEKEEQKSQSAT  201


>gi|119489574|ref|ZP_01622334.1| hypothetical protein L8106_08196 [Lyngbya sp. PCC 8106]
 gi|119454486|gb|EAW35634.1| hypothetical protein L8106_08196 [Lyngbya sp. PCC 8106]
Length=280

 Score =  151 bits (382),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 75/213 (36%), Positives = 122/213 (58%), Gaps = 13/213 (6%)

Query  1    VLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWA  60
            +L+      RL+R R+YAR+G V+S+      V A VQG+++ PY + + +  F   +W 
Sbjct  20   LLDKYRFKKRLERARNYARQGNVLSIDFQDQKVQAQVQGTQSEPYEVSLWLDHFSDEEWG  79

Query  61   HVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHL  120
             V  TL++ A ++AKLL+GEMP++IE+VF+  GL LFP +  ++   C+CPD A PCKH+
Sbjct  80   FVIETLSQQAIFSAKLLAGEMPQNIEEVFSANGLRLFPFSLDDVHAHCTCPDKANPCKHI  139

Query  121  AATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLD  180
             A +Y+L + F EDPF +   RG+ +E ++ANL   R+        + + +A+  T+ ++
Sbjct  140  GAVYYMLGDRFSEDPFVLFKLRGQTQEKIIANLRQLRSQTDEEIETNYQLLAE--TETVN  197

Query  181  RY---------YARQAD--INVPSPPATPSTAL  202
             Y         Y  Q D  + V +PP +    L
Sbjct  198  SYPPQVEQFWEYNEQLDPSLVVITPPTSSDNVL  230


>gi|113474327|ref|YP_720388.1| SWIM-type zinc finger protein [Trichodesmium erythraeum IMS101]
 gi|110165375|gb|ABG49915.1| zinc finger, SWIM-type [Trichodesmium erythraeum IMS101]
Length=286

 Score =  151 bits (382),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 81/241 (34%), Positives = 124/241 (52%), Gaps = 18/241 (7%)

Query  10   RLQRGRSYARKGQVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAHVERTLAEN  69
            RL+R R+YAR+G V+SL+     + A VQG+   PY++ + +  F    W+++ +T++E 
Sbjct  30   RLERARNYARQGNVLSLEFKDQKIIAEVQGTAPEPYKLFLWLDTFTDEDWSYIIQTMSER  89

Query  70   AWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAATFYLLAE  129
            A + AKLL+GEMP+DIE+VFA  GL LFP T  E+   CSCPD A  CKH+ A +YLL +
Sbjct  90   AIFTAKLLAGEMPQDIEEVFAANGLRLFPFTLDEIHSKCSCPDPAKVCKHIGAVYYLLGD  149

Query  130  SFDEDPFAILAWRGREREDLLANLAAARA---DGAAPAADHAEQVAQPLTDCLDRYYARQ  186
             F +DPF +   RGR +E +L  L   R    D   P A + +     ++D L    A Q
Sbjct  150  RFSDDPFLLFQLRGRTKERILEELRQKRGQSEDEKVPEAKNFKSKKTKVSDSLTVASATQ  209

Query  187  ADIN---------------VPSPPATPSTALLDQLPDTGLSARGRPLTELLRPAYHALTH  231
              ++               V   P+  +  +LD L D    +    +    +  Y  ++ 
Sbjct  210  ESLSFENFWQYNQQLDPSLVVISPSPSNEIVLDVLGDVPFGSSANVVMNYFQKIYQNISQ  269

Query  232  H  232
             
Sbjct  270  Q  270



Lambda     K      H
   0.319    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 325878760174


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40