BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2103c

Length=144
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841594|ref|NP_336631.1|  hypothetical protein MT2163 [Mycoba...   288    1e-76
gi|15609240|ref|NP_216619.1|  hypothetical protein Rv2103c [Mycob...   288    1e-76
gi|289758220|ref|ZP_06517598.1|  conserved hypothetical protein [...   286    5e-76
gi|340627115|ref|YP_004745567.1|  hypothetical protein MCAN_21291...   285    1e-75
gi|307084750|ref|ZP_07493863.1|  toxin [Mycobacterium tuberculosi...   282    1e-74
gi|289750699|ref|ZP_06510077.1|  conserved hypothetical protein [...   272    1e-71
gi|145221522|ref|YP_001132200.1|  PilT domain-containing protein ...   214    4e-54
gi|333990439|ref|YP_004523053.1|  hypothetical protein JDM601_179...   209    1e-52
gi|116624725|ref|YP_826881.1|  PilT domain-containing protein [Ca...   142    2e-32
gi|300780204|ref|ZP_07090060.1|  PilT domain protein [Corynebacte...   130    9e-29
gi|116748338|ref|YP_845025.1|  PilT domain-containing protein [Sy...   126    8e-28
gi|229822546|ref|YP_002884072.1|  PIN domain-containing protein f...   124    3e-27
gi|297623633|ref|YP_003705067.1|  PIN domain-containing protein [...   123    7e-27
gi|308270136|emb|CBX26748.1|  hypothetical protein N47_A07770 [un...   117    4e-25
gi|240170675|ref|ZP_04749334.1|  PIN domain protein family protei...   108    2e-22
gi|333991903|ref|YP_004524517.1|  PIN domain-containing protein f...   107    7e-22
gi|88810689|ref|ZP_01125946.1|  hypothetical protein NB231_16453 ...   106    1e-21
gi|467021|gb|AAA17206.1|  B2126_C3_261 [Mycobacterium leprae]          106    1e-21
gi|240168912|ref|ZP_04747571.1|  hypothetical protein MkanA1_0634...   105    2e-21
gi|15608382|ref|NP_215758.1|  hypothetical protein Rv1242 [Mycoba...  99.8    1e-19
gi|289573902|ref|ZP_06454129.1|  toxin [Mycobacterium tuberculosi...  97.4    6e-19
gi|294054235|ref|YP_003547893.1|  PIN domain-containing protein f...  95.1    3e-18
gi|296130776|ref|YP_003638026.1|  PIN domain protein family prote...  88.6    3e-16
gi|320105317|ref|YP_004180907.1|  PIN domain-containing protein f...  85.9    2e-15
gi|340625767|ref|YP_004744219.1|  hypothetical protein MCAN_07521...  84.0    7e-15
gi|297567544|ref|YP_003686516.1|  PIN domain-containing protein f...  82.8    1e-14
gi|297623624|ref|YP_003705058.1|  PIN domain-containing protein [...  80.9    5e-14
gi|167967876|ref|ZP_02550153.1|  hypothetical protein MtubH3_0751...  80.9    7e-14
gi|15607889|ref|NP_215263.1|  hypothetical protein Rv0749 [Mycoba...  80.1    1e-13
gi|121636671|ref|YP_976894.1|  hypothetical protein BCG_0799 [Myc...  80.1    1e-13
gi|340625313|ref|YP_004743765.1|  hypothetical protein MCAN_02841...  78.6    3e-13
gi|306774366|ref|ZP_07412703.1|  toxin [Mycobacterium tuberculosi...  77.4    7e-13
gi|253797202|ref|YP_003030203.1|  toxin [Mycobacterium tuberculos...  76.6    1e-12
gi|15607418|ref|NP_214791.1|  hypothetical protein Rv0277c [Mycob...  75.9    2e-12
gi|88811999|ref|ZP_01127252.1|  hypothetical protein NB231_06401 ...  75.5    3e-12
gi|121638754|ref|YP_978978.1|  hypothetical protein BCG_2894 [Myc...  68.9    2e-10
gi|340627865|ref|YP_004746317.1|  hypothetical protein MCAN_28941...  68.9    2e-10
gi|289744472|ref|ZP_06503850.1|  conserved hypothetical protein [...  68.9    2e-10
gi|15610009|ref|NP_217388.1|  hypothetical protein Rv2872 [Mycoba...  68.6    3e-10
gi|258593480|emb|CBE69819.1|  Conserved membrane protein [NC10 ba...  67.8    5e-10
gi|289756836|ref|ZP_06516214.1|  conserved hypothetical protein [...  66.6    1e-09
gi|322435687|ref|YP_004217899.1|  PIN domain protein family prote...  62.4    2e-08
gi|313835966|gb|EFS73680.1|  toxin-antitoxin system, toxin compon...  62.0    3e-08
gi|340628670|ref|YP_004747122.1|  hypothetical protein MCAN_37181...  60.8    7e-08
gi|15610833|ref|NP_218214.1|  hypothetical protein Rv3697c [Mycob...  60.8    7e-08
gi|258593476|emb|CBE69815.1|  conserved protein of unknown functi...  59.3    2e-07
gi|254550248|ref|ZP_05140695.1|  toxin [Mycobacterium tuberculosi...  58.9    2e-07
gi|31794868|ref|NP_857361.1|  hypothetical protein Mb3723c [Mycob...  57.8    6e-07
gi|306805540|ref|ZP_07442208.1|  toxin [Mycobacterium tuberculosi...  57.4    7e-07
gi|302542963|ref|ZP_07295305.1|  putative toxin-antitoxin system,...  57.0    8e-07


>gi|15841594|ref|NP_336631.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
 gi|13881843|gb|AAK46445.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
Length=145

 Score =  288 bits (738),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP
Sbjct  2    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  61

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA
Sbjct  62   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  121

Query  121  SIVSYDSDFGRFEGVRWDQPPALL  144
            SIVSYDSDFGRFEGVRWDQPPALL
Sbjct  122  SIVSYDSDFGRFEGVRWDQPPALL  145


>gi|15609240|ref|NP_216619.1| hypothetical protein Rv2103c [Mycobacterium tuberculosis H37Rv]
 gi|31793285|ref|NP_855778.1| hypothetical protein Mb2129c [Mycobacterium bovis AF2122/97]
 gi|121637987|ref|YP_978211.1| hypothetical protein BCG_2122c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 67 more sequence titles
 Length=144

 Score =  288 bits (738),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP
Sbjct  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  SIVSYDSDFGRFEGVRWDQPPALL  144
            SIVSYDSDFGRFEGVRWDQPPALL
Sbjct  121  SIVSYDSDFGRFEGVRWDQPPALL  144


>gi|289758220|ref|ZP_06517598.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294997046|ref|ZP_06802737.1| hypothetical protein Mtub2_21708 [Mycobacterium tuberculosis 
210]
 gi|289713784|gb|EFD77796.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326903715|gb|EGE50648.1| toxin [Mycobacterium tuberculosis W-148]
 gi|339295024|gb|AEJ47135.1| hypothetical protein CCDC5079_1945 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298648|gb|AEJ50758.1| hypothetical protein CCDC5180_1921 [Mycobacterium tuberculosis 
CCDC5180]
Length=144

 Score =  286 bits (733),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 143/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MKIVDANVLLYAVNT SEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP
Sbjct  1    MKIVDANVLLYAVNTASEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  SIVSYDSDFGRFEGVRWDQPPALL  144
            SIVSYDSDFGRFEGVRWDQPPALL
Sbjct  121  SIVSYDSDFGRFEGVRWDQPPALL  144


>gi|340627115|ref|YP_004745567.1| hypothetical protein MCAN_21291 [Mycobacterium canettii CIPT 
140010059]
 gi|340005305|emb|CCC44461.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=144

 Score =  285 bits (729),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 142/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLL+FVRLATKVGLFPRP
Sbjct  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLSFVRLATKVGLFPRP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  SIVSYDSDFGRFEGVRWDQPPALL  144
            SIVSYDSDFGRF GVRWDQPPALL
Sbjct  121  SIVSYDSDFGRFAGVRWDQPPALL  144


>gi|307084750|ref|ZP_07493863.1| toxin [Mycobacterium tuberculosis SUMu012]
 gi|308365680|gb|EFP54531.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=143

 Score =  282 bits (722),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP
Sbjct  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  SIVSYDSDFGRFEGVRWDQPPAL  143
            SIVSYDSDFGRFEGVRWDQP  L
Sbjct  121  SIVSYDSDFGRFEGVRWDQPALL  143


>gi|289750699|ref|ZP_06510077.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289691286|gb|EFD58715.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=136

 Score =  272 bits (695),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  9    LLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPREAAIT  68
            +LYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPREAAIT
Sbjct  1    MLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPREAAIT  60

Query  69   QVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASIVSYDSD  128
            QVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASIVSYDSD
Sbjct  61   QVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASIVSYDSD  120

Query  129  FGRFEGVRWDQPPALL  144
            FGRFEGVRWDQPPALL
Sbjct  121  FGRFEGVRWDQPPALL  136


>gi|145221522|ref|YP_001132200.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145214008|gb|ABP43412.1| PIN domain family protein [Mycobacterium gilvum PYR-GCK]
Length=145

 Score =  214 bits (544),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 103/144 (72%), Positives = 120/144 (84%), Gaps = 0/144 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M+IVDANVLLYAVN++SEHH  S RWLDGALSG D VG AWVP+LAFVRL TK GLFP P
Sbjct  1    MRIVDANVLLYAVNSSSEHHDASRRWLDGALSGNDVVGLAWVPMLAFVRLTTKHGLFPSP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L  + A+ ++ DW +AP AV+VNPT RHAD+LA +L+ VGTG NLVNDAHLAALA+EHRA
Sbjct  61   LTPDDAMARITDWCSAPGAVIVNPTARHADVLATLLSDVGTGGNLVNDAHLAALALEHRA  120

Query  121  SIVSYDSDFGRFEGVRWDQPPALL  144
             IVSYD+DFGRF GV+WD P +LL
Sbjct  121  RIVSYDNDFGRFSGVQWDVPESLL  144


>gi|333990439|ref|YP_004523053.1| hypothetical protein JDM601_1799 [Mycobacterium sp. JDM601]
 gi|333486407|gb|AEF35799.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=143

 Score =  209 bits (532),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 107/143 (75%), Positives = 118/143 (83%), Gaps = 1/143 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MKIVDANVLLYAVNT +EHH  SLRWLD ALSGAD VGFAWVPLLAFVRL+TK GLFP P
Sbjct  1    MKIVDANVLLYAVNTAAEHHDASLRWLDRALSGADTVGFAWVPLLAFVRLSTKEGLFPHP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L  E A+ +VA+W AA SAV+VNPT RHADIL  +L  VG G NLVNDAHLAALA+EHR 
Sbjct  61   LRPEDAVDRVAEWTAASSAVVVNPTPRHADILTGLLARVGAGGNLVNDAHLAALAIEHRG  120

Query  121  SIVSYDSDFGRFEGVRWDQPPAL  143
             IVSYD+DFGRF G+RWD+P  L
Sbjct  121  GIVSYDADFGRF-GIRWDRPDDL  142


>gi|116624725|ref|YP_826881.1| PilT domain-containing protein [Candidatus Solibacter usitatus 
Ellin6076]
 gi|116227887|gb|ABJ86596.1| PIN domain family protein [Candidatus Solibacter usitatus Ellin6076]
Length=142

 Score =  142 bits (358),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 68/140 (49%), Positives = 96/140 (69%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            MK++DAN+LLYAVN  +  H+ + +WL+  LSG + +GF+W  +LAF+RL T+ GLF +P
Sbjct  1    MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L  + A   VA WLA P+A++V+   RH +I+ R++  +GT  NL +DAHL ALA+E  A
Sbjct  61   LSPDQAFDLVASWLAEPAAIIVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             + S DSDF RF GV W  P
Sbjct  121  QLCSCDSDFARFSGVDWLNP  140


>gi|300780204|ref|ZP_07090060.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
 gi|300534314|gb|EFK55373.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
Length=145

 Score =  130 bits (326),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 65/138 (48%), Positives = 84/138 (61%), Gaps = 0/138 (0%)

Query  3    IVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLP  62
            I+DANVL+YA +  + H   +  WLDGAL G +RVGF W+ LLAF R+ T   LF  PL 
Sbjct  2    IIDANVLIYASDENATHFAEASSWLDGALRGTERVGFPWICLLAFQRITTNPALFAMPLT  61

Query  63   REAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASI  122
               A   + +WL  P++ +  P  +HA IL  +         LV DAHLAALA+EH  SI
Sbjct  62   PSRASDYIENWLKHPNSWVPQPGPQHASILRTLTVDSDARGTLVTDAHLAALAIEHGTSI  121

Query  123  VSYDSDFGRFEGVRWDQP  140
             S+DSDF RF+G+RW  P
Sbjct  122  CSFDSDFARFQGLRWFSP  139


>gi|116748338|ref|YP_845025.1| PilT domain-containing protein [Syntrophobacter fumaroxidans 
MPOB]
 gi|116697402|gb|ABK16590.1| PIN domain family protein [Syntrophobacter fumaroxidans MPOB]
Length=144

 Score =  126 bits (317),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 66/143 (47%), Positives = 87/143 (61%), Gaps = 0/143 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M +VD N+LLYAVN     H  S  WL+  LSG++ VG  WV + AF+R+ T   +F RP
Sbjct  1    MILVDVNLLLYAVNQDLPQHARSRTWLETVLSGSESVGLPWVVIRAFLRITTNARIFERP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L  E A+  V +WLA P A  V P   H  IL  +L   GTG NL  DAH+AALA+E+  
Sbjct  61   LSVERAVAYVEEWLAQPVATTVTPGKSHWMILRNLLLDSGTGGNLTTDAHIAALAIEYGH  120

Query  121  SIVSYDSDFGRFEGVRWDQPPAL  143
            ++ S D+DF RF+G+R   P A+
Sbjct  121  TVYSTDNDFKRFQGLRHINPLAV  143


>gi|229822546|ref|YP_002884072.1| PIN domain-containing protein family protein [Beutenbergia cavernae 
DSM 12333]
 gi|229568459|gb|ACQ82310.1| PIN domain protein family protein [Beutenbergia cavernae DSM 
12333]
Length=143

 Score =  124 bits (312),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 71/140 (51%), Positives = 86/140 (62%), Gaps = 0/140 (0%)

Query  3    IVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLP  62
            IVDANVLLYAV+T S  H+ +  WL+ ALSG  RVG  W  LLAF R+A+      +PL 
Sbjct  2    IVDANVLLYAVDTGSPFHRAAKEWLEEALSGPARVGLPWPSLLAFQRIASHPRAAAQPLT  61

Query  63   REAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASI  122
              AA   + +WL A  A +  P   HA IL R+LT      NLV DAHLAALA+EH   I
Sbjct  62   PGAAWAFITEWLRADPAWIPTPGDGHAAILGRLLTAGDLRGNLVTDAHLAALALEHGVGI  121

Query  123  VSYDSDFGRFEGVRWDQPPA  142
             S+DSDF RF+G+ W  P A
Sbjct  122  CSFDSDFARFDGLTWHNPSA  141


>gi|297623633|ref|YP_003705067.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297164813|gb|ADI14524.1| PIN domain protein family protein [Truepera radiovictrix DSM 
17093]
Length=145

 Score =  123 bits (309),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 65/140 (47%), Positives = 82/140 (59%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++DAN+L+YA    S  H  +  WLD  LS   RVG  W  LLAF+RL T   +F RP
Sbjct  1    MILIDANLLIYAHVMGSPQHHAAHAWLDAQLSAGYRVGLPWPSLLAFLRLTTNPRVFERP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L    A  QV  WL+ PS  L  PT  H  +L  ++T  G  ANL+ DAHLAALA+EH  
Sbjct  61   LTAAEAWAQVEAWLSVPSVWLPTPTAEHPKLLRDLVTQTGATANLIPDAHLAALALEHGL  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            ++ S D DFGRF  ++W  P
Sbjct  121  TLCSTDGDFGRFPRLKWRNP  140


>gi|308270136|emb|CBX26748.1| hypothetical protein N47_A07770 [uncultured Desulfobacterium 
sp.]
Length=143

 Score =  117 bits (294),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 61/143 (43%), Positives = 84/143 (59%), Gaps = 0/143 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M +VDAN+LLYA ++ S  H+ +  W D  LS ++ V   W  L AF+R+ T   +F  P
Sbjct  1    MILVDANILLYAEDSLSPLHQQARLWWDDQLSKSEPVCLCWPVLSAFIRIGTNPRVFEHP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LP E A+T+V  WL  P   ++ PT +H  +   ML      ANLV DAHLAALA+E+  
Sbjct  61   LPLEQALTRVQSWLDQPCTRVIQPTEQHWAVFMMMLKGGQAVANLVTDAHLAALAIENGC  120

Query  121  SIVSYDSDFGRFEGVRWDQPPAL  143
             + S DSDF RF  ++W  P +L
Sbjct  121  DLASTDSDFSRFPKLKWINPLSL  143


>gi|240170675|ref|ZP_04749334.1| PIN domain protein family protein [Mycobacterium kansasii ATCC 
12478]
Length=142

 Score =  108 bits (271),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 63/138 (46%), Positives = 81/138 (59%), Gaps = 0/138 (0%)

Query  3    IVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLP  62
            IVDAN+LLYAV+ +S H+  +  WL+  L+G  RVG  W  + AF+R+AT   +   PL 
Sbjct  2    IVDANLLLYAVDESSAHNVAAASWLEEVLAGDSRVGLPWQTIGAFLRIATHPRVAENPLS  61

Query  63   REAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASI  122
              AA   VA+WLA P   +   T   A + AR+   V    NLV DA LAALAVEH   +
Sbjct  62   GPAAWRYVAEWLAVPVVWIPPATETTARVYARLSEQVEITGNLVPDAQLAALAVEHGVEL  121

Query  123  VSYDSDFGRFEGVRWDQP  140
             S D+DF RF G+RW  P
Sbjct  122  ASADTDFMRFPGLRWMNP  139


>gi|333991903|ref|YP_004524517.1| PIN domain-containing protein family protein [Mycobacterium sp. 
JDM601]
 gi|333487871|gb|AEF37263.1| PIN domain protein family protein [Mycobacterium sp. JDM601]
Length=143

 Score =  107 bits (266),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 58/138 (43%), Positives = 80/138 (58%), Gaps = 0/138 (0%)

Query  3    IVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLP  62
            ++DAN+LLYAV+  S+H+  +  WL+  L+G +R+G  W  + AF+R+ T   +   PLP
Sbjct  2    LLDANLLLYAVDADSKHNPVAAAWLEETLNGDNRIGLPWQTIGAFLRIITHPRVTENPLP  61

Query  63   REAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASI  122
               A + VADWLA P   +   T   A + A +        NLV DA LAALA+EH   +
Sbjct  62   PSEAWSYVADWLAVPVVWIPPATEATARVYAGICAQADVAGNLVPDAQLAALAIEHGVEL  121

Query  123  VSYDSDFGRFEGVRWDQP  140
             S DSDF RF G+RW  P
Sbjct  122  ASADSDFQRFPGLRWFNP  139


>gi|88810689|ref|ZP_01125946.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
 gi|88792319|gb|EAR23429.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
Length=144

 Score =  106 bits (265),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 52/140 (38%), Positives = 74/140 (53%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M + D N+L+YA NT + HH  +  W +G LS  + VG  W   L F+RL T   +   P
Sbjct  1    MIVPDVNLLIYAYNTDAPHHSDAKAWWEGLLSSEEPVGLPWASALGFIRLMTHRAVLVMP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            +    A+  V  W +  +   + P  RH ++L  +   +GT   L  D HLAALA+EH+ 
Sbjct  61   VEPSRAVEYVRSWHSRSNVSALEPGPRHLELLDGLFAALGTAGKLTTDTHLAALAIEHQC  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             + S D DF RF G+RW  P
Sbjct  121  VLCSNDGDFARFPGLRWRNP  140


>gi|467021|gb|AAA17206.1| B2126_C3_261 [Mycobacterium leprae]
Length=97

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/96 (60%), Positives = 65/96 (68%), Gaps = 0/96 (0%)

Query  1   MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
           MKI DANVLLY+ NT+SEH           LS ADR+GF WVPLL FVR ATK+GL  R 
Sbjct  1   MKIADANVLLYSGNTSSEHTGHPCAGSTVRLSCADRIGFGWVPLLVFVRPATKMGLVLRT  60

Query  61  LPREAAITQVADWLAAPSAVLVNPTVRHADILARML  96
           +  E AI QVADWL  PSAVL+  TVRHA  L ++L
Sbjct  61  MSSEDAIGQVADWLTGPSAVLMCLTVRHAAFLVKIL  96


>gi|240168912|ref|ZP_04747571.1| hypothetical protein MkanA1_06345 [Mycobacterium kansasii ATCC 
12478]
Length=143

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 52/140 (38%), Positives = 76/140 (55%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M I D N+LLYAV T    H+ +  W    ++  +R+G  +  +  F+R+ T   +   P
Sbjct  1    MIIPDVNLLLYAVITGFPQHRRAYAWWHDTVNSQERIGLTYPAVFGFLRIVTNARILTEP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L    A+  V DWL  P+  L+ P+ RH D+   +L  +GT +NL  D  LAA A+EH A
Sbjct  61   LSATEAVAYVRDWLTQPNVDLLIPSARHLDLALGLLEQLGTASNLTTDVQLAAYAIEHNA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             + S D+DF RF G+ W  P
Sbjct  121  EMHSSDADFARFAGLAWTNP  140


>gi|15608382|ref|NP_215758.1| hypothetical protein Rv1242 [Mycobacterium tuberculosis H37Rv]
 gi|15840687|ref|NP_335724.1| hypothetical protein MT1280 [Mycobacterium tuberculosis CDC1551]
 gi|31792435|ref|NP_854928.1| hypothetical protein Mb1274 [Mycobacterium bovis AF2122/97]
 79 more sequence titles
 Length=143

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 53/140 (38%), Positives = 76/140 (55%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M I D N+LLYAV T    H+ +  W    ++G  R+G  +  L  F+R+AT   +   P
Sbjct  1    MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LP   AI  V +WL+ P+  L+    RH DI   +L  +GT ++L  D  LAA  +E+ A
Sbjct  61   LPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAAYGIEYDA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             I S D+DF RF  ++W  P
Sbjct  121  EIHSSDTDFARFADLKWTDP  140


>gi|289573902|ref|ZP_06454129.1| toxin [Mycobacterium tuberculosis K85]
 gi|289538333|gb|EFD42911.1| toxin [Mycobacterium tuberculosis K85]
Length=143

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 52/140 (38%), Positives = 75/140 (54%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M I D N+LLYAV T    H+ +  W    ++G  R+G  +  L  F+R+AT   +   P
Sbjct  1    MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LP   AI  V +WL+ P+  L+    RH DI   +L  +GT ++   D  LAA  +E+ A
Sbjct  61   LPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHRTTDVQLAAYGIEYDA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             I S D+DF RF  ++W  P
Sbjct  121  EIHSSDTDFARFADLKWTDP  140


>gi|294054235|ref|YP_003547893.1| PIN domain-containing protein family protein [Coraliomargarita 
akajimensis DSM 45221]
 gi|293613568|gb|ADE53723.1| PIN domain protein family protein [Coraliomargarita akajimensis 
DSM 45221]
Length=142

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 52/140 (38%), Positives = 73/140 (53%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M + DAN+L+YA + +S  H  +  W + ALSG++ +G  W+ +LAF R+ T   +   P
Sbjct  1    MILPDANLLIYAHDHSSRDHATAKDWWETALSGSESIGIPWIVVLAFTRILTHPQICEAP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            L        V  W  +P   L+  + R   +   +L   G G NL  DA +AA A EH A
Sbjct  61   LGVTQVRELVEQWFDSPQVRLIQTSNRALPVFFDLLEDAGMGGNLSTDALIAAHAREHSA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             I S D DF RF G+RW  P
Sbjct  121  VIYSCDRDFDRFMGIRWVNP  140


>gi|296130776|ref|YP_003638026.1| PIN domain protein family protein [Cellulomonas flavigena DSM 
20109]
 gi|296022591|gb|ADG75827.1| PIN domain protein family protein [Cellulomonas flavigena DSM 
20109]
Length=143

 Score = 88.6 bits (218),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 55/137 (41%), Positives = 71/137 (52%), Gaps = 0/137 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M + D NVL+ A+   S  H    RWL+ A+   + +G     L   VR+ T   +F RP
Sbjct  1    MILPDVNVLVGALRADSPRHDALRRWLEAAVDAPEPLGLTDAVLGGTVRVLTHPRVFARP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             P   A+  V D  A P  V V P  RH +I+A +        NLV DA  AA+AVEH A
Sbjct  61   TPLRTALDLVGDLRAHPGTVRVAPGDRHWEIVADLCRAADARGNLVADAQHAAVAVEHGA  120

Query  121  SIVSYDSDFGRFEGVRW  137
            + VS D DF RF G+RW
Sbjct  121  TWVSQDRDFARFPGLRW  137


>gi|320105317|ref|YP_004180907.1| PIN domain-containing protein family protein [Terriglobus saanensis 
SP1PR4]
 gi|319923838|gb|ADV80913.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=145

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 51/143 (36%), Positives = 78/143 (55%), Gaps = 6/143 (4%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++DAN+L+YA +  + HHK S +W++   S  + V      ++AF+R+ T   L   P
Sbjct  1    MILLDANLLIYAYDEAAPHHKRSSKWIERIFSSREPVLIPVAAIMAFLRIMTHQAL---P  57

Query  61   LPR---EAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVE  117
             PR   E  I  V +W +     +      H + L + LT     ++LV D+HLAALA+E
Sbjct  58   GPRFSMEEGIGIVDEWFSLSHVSIAITGNEHWNYLRQTLTDGQARSSLVTDSHLAALAIE  117

Query  118  HRASIVSYDSDFGRFEGVRWDQP  140
            + A++ S D DF RF G+RW  P
Sbjct  118  NGATLCSVDRDFARFPGLRWVDP  140


>gi|340625767|ref|YP_004744219.1| hypothetical protein MCAN_07521 [Mycobacterium canettii CIPT 
140010059]
 gi|340003957|emb|CCC43092.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 52/141 (37%), Positives = 72/141 (52%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++DANVLL A      +H+    W D  L+  D      +   +F+RLAT   +F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR AA   +    A P  +  NP  RH  +L ++        +L+ DA LAA+AVEH  
Sbjct  61   SPRAAAFAFIDAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFTSVRHIRPP  141


>gi|297567544|ref|YP_003686516.1| PIN domain-containing protein family protein [Meiothermus silvanus 
DSM 9946]
 gi|296851993|gb|ADH65008.1| PIN domain protein family protein [Meiothermus silvanus DSM 9946]
Length=143

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 52/141 (37%), Positives = 74/141 (53%), Gaps = 2/141 (1%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGF-AWVPLLAFVRLATKVGLFPR  59
            M ++D NVL+YA    S  H     WL G+L+  + VG  +WV L A +R+ T   L   
Sbjct  1    MYVLDVNVLIYAFRRDSPQHPACYAWLSGSLATGESVGVPSWVEL-AVLRINTLPSLGDL  59

Query  60   PLPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR  119
              P +  +  + +  + PS  LV P  +H  I   +   +G   N +NDA +AALA+EH 
Sbjct  60   AAPLKDVLAFLYELRSHPSYQLVEPGPKHLPIFEDLCQRLGLRGNDLNDAFIAALAIEHG  119

Query  120  ASIVSYDSDFGRFEGVRWDQP  140
            A++VS D  F RF GVR   P
Sbjct  120  ATLVSTDRGFARFPGVRRIDP  140


>gi|297623624|ref|YP_003705058.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297164804|gb|ADI14515.1| PIN domain protein family protein [Truepera radiovictrix DSM 
17093]
Length=144

 Score = 80.9 bits (198),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 45/140 (33%), Positives = 72/140 (52%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++D N L+YA    +  H   + WL+  ++     G A +    F+R+ T   +F  P
Sbjct  1    MILLDINPLVYAFRPDAPQHPAYVGWLEKLVNQDAAFGLADIVCSGFIRVVTHPRVFSPP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             P + A+  + D  A P+ V++ P  RH  I  ++   VG   N+V DA+LAALA+E  +
Sbjct  61   SPLDDALEYLEDIRAQPNCVILAPGERHWRIFLQLCHAVGAKGNVVPDAYLAALAIESGS  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
             + + D    RF G+RW  P
Sbjct  121  ELATADRGVARFPGLRWRHP  140


>gi|167967876|ref|ZP_02550153.1| hypothetical protein MtubH3_07513 [Mycobacterium tuberculosis 
H37Ra]
Length=123

 Score = 80.9 bits (198),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 45/122 (37%), Positives = 65/122 (54%), Gaps = 0/122 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M I D N+LLYAV T    H+ +  W    ++G  R+G  +  L  F+R+AT   +   P
Sbjct  1    MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
            LP   AI  V +WL+ P+  L+    RH DI   +L  +GT ++L  D  LAA  +E+ A
Sbjct  61   LPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAAYGIEYDA  120

Query  121  SI  122
             I
Sbjct  121  EI  122


>gi|15607889|ref|NP_215263.1| hypothetical protein Rv0749 [Mycobacterium tuberculosis H37Rv]
 gi|15840162|ref|NP_335199.1| hypothetical protein MT0773 [Mycobacterium tuberculosis CDC1551]
 gi|31791935|ref|NP_854428.1| hypothetical protein Mb0770 [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=142

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 51/141 (37%), Positives = 70/141 (50%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++DANVLL A      +H+    W D  L+  D      +   +F+RLAT   +F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR  A   V    A P  +  NP  RH  +L ++        +L+ DA LAA+AV H  
Sbjct  61   SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFASVRHIRPP  141


>gi|121636671|ref|YP_976894.1| hypothetical protein BCG_0799 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989143|ref|YP_002643830.1| hypothetical protein JTY_0769 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289442150|ref|ZP_06431894.1| toxin [Mycobacterium tuberculosis T46]
 10 more sequence titles
 Length=142

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 51/141 (37%), Positives = 70/141 (50%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++DANVLL A      +H+    W D  L+  D      +   +F+RLAT   +F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR  A   V    A P  +  NP  RH  +L ++        +L+ DA LAA+AV H  
Sbjct  61   SPRAEAFAFVEAVTAQPHHLPTNPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVGHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFASVRHIRPP  141


>gi|340625313|ref|YP_004743765.1| hypothetical protein MCAN_02841 [Mycobacterium canettii CIPT 
140010059]
 gi|340003503|emb|CCC42624.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 50/141 (36%), Positives = 70/141 (50%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++DANVLL A      +H+    W D  L+  D      +   +F+RL T   +F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR  A   V    A P  +  +P  RH  +L ++        +L+ DA LAA+AVEH  
Sbjct  61   SPRADAFAFVDAVTAQPHHLPTSPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFASVRHIRPP  141


>gi|306774366|ref|ZP_07412703.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|306974699|ref|ZP_07487360.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|307082408|ref|ZP_07491578.1| toxin [Mycobacterium tuberculosis SUMu011]
 gi|308217200|gb|EFO76599.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|308356102|gb|EFP44953.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|308360056|gb|EFP48907.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=142

 Score = 77.4 bits (189),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 49/141 (35%), Positives = 69/141 (49%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++D NVLL A      +H+    W D  L+  D      +   +F+RL T   +F  P
Sbjct  1    MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR  A   V    A P  +  +P  RH  +L ++        +L+ DA LAA+AVEH  
Sbjct  61   SPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVEHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFASVRHIRPP  141


>gi|253797202|ref|YP_003030203.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289552530|ref|ZP_06441740.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|297632757|ref|ZP_06950537.1| toxin [Mycobacterium tuberculosis KZN 4207]
 gi|297729731|ref|ZP_06958849.1| toxin [Mycobacterium tuberculosis KZN R506]
 gi|313657057|ref|ZP_07813937.1| toxin [Mycobacterium tuberculosis KZN V2475]
 gi|253318705|gb|ACT23308.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289437162|gb|EFD19655.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328456989|gb|AEB02412.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=142

 Score = 76.6 bits (187),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 48/141 (35%), Positives = 68/141 (49%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++D NVLL A      +H+    W D  L+  D      +   +F+RL T   +F  P
Sbjct  1    MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR  A   V    A P  +  +P  RH  +L ++        +L+ DA L A+AVEH  
Sbjct  61   SPRADAFAFVEAVTAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFASVRHIRPP  141


>gi|15607418|ref|NP_214791.1| hypothetical protein Rv0277c [Mycobacterium tuberculosis H37Rv]
 gi|15839658|ref|NP_334695.1| hypothetical protein MT0289 [Mycobacterium tuberculosis CDC1551]
 gi|31791455|ref|NP_853948.1| hypothetical protein Mb0283c [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=142

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 48/141 (35%), Positives = 68/141 (49%), Gaps = 0/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++D NVLL A      +H+    W D  L+  D      +   +F+RL T   +F  P
Sbjct  1    MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             PR  A   V    A P  +  +P  RH  +L ++        +L+ DA L A+AVEH  
Sbjct  61   SPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHC  120

Query  121  SIVSYDSDFGRFEGVRWDQPP  141
            ++VS D DF RF  VR  +PP
Sbjct  121  AVVSLDRDFARFASVRHIRPP  141


>gi|88811999|ref|ZP_01127252.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
 gi|88790883|gb|EAR21997.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
Length=145

 Score = 75.5 bits (184),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 70/140 (50%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M ++D NVL+YA    +  H     WL+  ++G    G + + L  F+R+ T   +F RP
Sbjct  1    MILMDVNVLVYAHREDTADHLAYRDWLEEQINGLGAYGVSDLVLSGFIRVVTHPRVFERP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
             P + A+  V    + P AV + P  RH  I  +++       NLV DA+ AALA+E   
Sbjct  61   TPLDRALAFVHQVRSQPQAVPIRPGPRHWAIFEKLVRLSKAEGNLVPDAYHAALAIEAGC  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
              ++ D  F RF G+R   P
Sbjct  121  DWITTDKGFLRFPGLRARHP  140


>gi|121638754|ref|YP_978978.1| hypothetical protein BCG_2894 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991246|ref|YP_002645935.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121494402|emb|CAL72883.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224774361|dbj|BAH27167.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602792|emb|CCC65470.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=147

 Score = 68.9 bits (167),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   TSPQDAWQAVDTLLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            + +S D  F RF  +RW  P
Sbjct  121  TWLSADRGFARFRRLRWRHP  140


>gi|340627865|ref|YP_004746317.1| hypothetical protein MCAN_28941 [Mycobacterium canettii CIPT 
140010059]
 gi|157382523|gb|ABV48756.1| Rv2872 [Mycobacterium canettii]
 gi|340006055|emb|CCC45225.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=147

 Score = 68.9 bits (167),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MLCVDVNVLVYAHRADLREHTDYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            + +S D  F RF  +RW  P
Sbjct  121  TWLSADRGFARFRRLRWRHP  140


>gi|289744472|ref|ZP_06503850.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289685000|gb|EFD52488.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=131

 Score = 68.9 bits (167),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 43/122 (36%), Positives = 59/122 (49%), Gaps = 0/122 (0%)

Query  20   HKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPREAAITQVADWLAAPSA  79
            H+    W D  L+  D      +   +F+RLAT   +F  P PR  A   V    A P  
Sbjct  9    HRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHH  68

Query  80   VLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASIVSYDSDFGRFEGVRWDQ  139
            +  NP  RH  +L ++        +L+ DA LAA+AV H  ++VS D DF RF  VR  +
Sbjct  69   LPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIR  128

Query  140  PP  141
            PP
Sbjct  129  PP  130


>gi|15610009|ref|NP_217388.1| hypothetical protein Rv2872 [Mycobacterium tuberculosis H37Rv]
 gi|15842413|ref|NP_337450.1| hypothetical protein MT2939 [Mycobacterium tuberculosis CDC1551]
 gi|31794049|ref|NP_856542.1| hypothetical protein Mb2897 [Mycobacterium bovis AF2122/97]
 75 more sequence titles
 Length=147

 Score = 68.6 bits (166),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            + +S D  F RF  +RW  P
Sbjct  121  TWLSADRGFARFRRLRWRHP  140


>gi|258593480|emb|CBE69819.1| Conserved membrane protein [NC10 bacterium 'Dutch sediment']
Length=144

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 43/131 (33%), Positives = 66/131 (51%), Gaps = 1/131 (0%)

Query  4    VDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPR  63
            VD NVLLYA +T+S  H  ++R+++      D    AW  L+A++R+AT   +F RPL  
Sbjct  5    VDVNVLLYASDTSSPKHPEAIRFMEERAFDPDLFCIAWSTLIAYLRIATYPRIFARPLSP  64

Query  64   EAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-ASI  122
              A+  V   L+ P    ++      D    +  +     NLV DAHLA L  +H    +
Sbjct  65   SDALGNVESLLSLPRVRTLSEGEDFLDGYRGVTAHFPVRGNLVPDAHLATLLQQHGVGRL  124

Query  123  VSYDSDFGRFE  133
             + D DF +F+
Sbjct  125  YTADRDFRKFD  135


>gi|289756836|ref|ZP_06516214.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289712400|gb|EFD76412.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=104

 Score = 66.6 bits (161),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 38/96 (40%), Positives = 51/96 (54%), Gaps = 0/96 (0%)

Query  46   AFVRLATKVGLFPRPLPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANL  105
            +F+RLAT   +F  P PR  A   V    A P  +  NP  RH  +L ++        +L
Sbjct  8    SFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDL  67

Query  106  VNDAHLAALAVEHRASIVSYDSDFGRFEGVRWDQPP  141
            + DA LAA+AV H  ++VS D DF RF  VR  +PP
Sbjct  68   IPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIRPP  103


>gi|322435687|ref|YP_004217899.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
 gi|321163414|gb|ADW69119.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
Length=143

 Score = 62.4 bits (150),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 47/143 (33%), Positives = 72/143 (51%), Gaps = 1/143 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSG-ADRVGFAWVPLLAFVRLATKVGLFPR  59
            M ++DAN+LLYA    S  H+P+  +LD   S  ++ +G       AF+RL T   +   
Sbjct  1    MIVLDANLLLYAYTARSSFHQPARSYLDHIFSDTSESIGIPIQCATAFLRLITNPAVTGA  60

Query  60   PLPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR  119
             +  + AI +V +W A P   ++ P   H   L  +        +L+ DA +AA A+E+ 
Sbjct  61   RIAMDDAIARVEEWQALPHVRILYPGEEHWQFLKTVTRNGHATGDLIADAAIAAFALEYG  120

Query  120  ASIVSYDSDFGRFEGVRWDQPPA  142
            A + S D DF RF  +RW  P A
Sbjct  121  AVVHSNDRDFARFSSIRWHNPLA  143


>gi|313835966|gb|EFS73680.1| toxin-antitoxin system, toxin component, PIN family [Propionibacterium 
acnes HL037PA2]
 gi|314927191|gb|EFS91022.1| toxin-antitoxin system, toxin component, PIN family [Propionibacterium 
acnes HL044PA1]
 gi|314970722|gb|EFT14820.1| toxin-antitoxin system, toxin component, PIN family [Propionibacterium 
acnes HL037PA3]
Length=116

 Score = 62.0 bits (149),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 34/77 (45%), Positives = 47/77 (62%), Gaps = 1/77 (1%)

Query  8   VLLYAVNTTSEHHKPSLRWLDGALSGADRV-GFAWVPLLAFVRLATKVGLFPRPLPREAA  66
           +L+YAVNT +++HK S  WL   L G+ RV G  W  LL FVR++T   +F  PL  E A
Sbjct  1   MLVYAVNTDAQYHKASRVWLLEGLRGSTRVIGMPWASLLGFVRISTHPRIFANPLEAEQA  60

Query  67  ITQVADWLAAPSAVLVN  83
           I+ V  WL+ P  V ++
Sbjct  61  ISVVNAWLSYPRVVTLS  77


>gi|340628670|ref|YP_004747122.1| hypothetical protein MCAN_37181 [Mycobacterium canettii CIPT 
140010059]
 gi|340006860|emb|CCC46049.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=145

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 43/140 (31%), Positives = 65/140 (47%), Gaps = 1/140 (0%)

Query  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62

Query  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            +I S+D DF +FEG+R   P
Sbjct  123  TIWSHDRDFRKFEGIRIRDP  142


>gi|15610833|ref|NP_218214.1| hypothetical protein Rv3697c [Mycobacterium tuberculosis H37Rv]
 gi|15843315|ref|NP_338352.1| hypothetical protein MT3799 [Mycobacterium tuberculosis CDC1551]
 gi|148663560|ref|YP_001285083.1| hypothetical protein MRA_3732 [Mycobacterium tuberculosis H37Ra]
 62 more sequence titles
 Length=145

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 43/140 (31%), Positives = 65/140 (47%), Gaps = 1/140 (0%)

Query  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62

Query  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            +I S+D DF +FEG+R   P
Sbjct  123  TIWSHDRDFRKFEGIRIRDP  142


>gi|258593476|emb|CBE69815.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=144

 Score = 59.3 bits (142),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 43/134 (33%), Positives = 63/134 (48%), Gaps = 2/134 (1%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M + D NVL+YA +  S  H+     L             W  L  F+R+ T   +F +P
Sbjct  1    MFVSDTNVLIYAADADSPFHRRCHARLQDWRGQTSAWYLTWGILYEFLRVTTHPRVFRQP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYV-GTGANLVNDAHLAALAVEHR  119
             P   A   +   LA+P   L+ PT RHA ++A +   +     N+++DAH A L  EH 
Sbjct  61   WPAARAWEFIEAVLASPGLSLLLPTDRHATVVAEVFGELPHLAGNVIHDAHTAILMREHG  120

Query  120  A-SIVSYDSDFGRF  132
               I + D+DF RF
Sbjct  121  IRRIYTRDTDFHRF  134


>gi|254550248|ref|ZP_05140695.1| toxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=89

 Score = 58.9 bits (141),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 28/71 (40%), Positives = 41/71 (58%), Gaps = 0/71 (0%)

Query  70   VADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASIVSYDSDF  129
            V +WL+ P+  L+    RH DI   +L  +GT ++L  D  LAA  +E+ A I S D+DF
Sbjct  16   VREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAAYGIEYDAEIHSSDTDF  75

Query  130  GRFEGVRWDQP  140
             RF  ++W  P
Sbjct  76   ARFADLKWTDP  86


>gi|31794868|ref|NP_857361.1| hypothetical protein Mb3723c [Mycobacterium bovis AF2122/97]
 gi|121639611|ref|YP_979835.1| hypothetical protein BCG_3756c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992107|ref|YP_002646796.1| hypothetical protein JTY_3757 [Mycobacterium bovis BCG str. Tokyo 
172]
 10 more sequence titles
 Length=145

 Score = 57.8 bits (138),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (46%), Gaps = 1/140 (0%)

Query  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61
            +  D +VL++A +  S  H  +   ++  L+    V   W   L ++R+ T   L   PL
Sbjct  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLARPGLVYLLWPVALGYLRVVTHPTLLGAPL  62

Query  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            +I S+D DF +FEG+R   P
Sbjct  123  TIWSHDRDFRKFEGIRIRDP  142


>gi|306805540|ref|ZP_07442208.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|306969936|ref|ZP_07482597.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|308347839|gb|EFP36690.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|308352492|gb|EFP41343.1| toxin [Mycobacterium tuberculosis SUMu009]
Length=145

 Score = 57.4 bits (137),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (46%), Gaps = 1/140 (0%)

Query  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++ + T   L   PL
Sbjct  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLWVVTHPTLLGAPL  62

Query  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  SIVSYDSDFGRFEGVRWDQP  140
            +I S+D DF +FEG+R   P
Sbjct  123  TIWSHDRDFRKFEGIRIRDP  142


>gi|302542963|ref|ZP_07295305.1| putative toxin-antitoxin system, toxin component, PIN family 
[Streptomyces hygroscopicus ATCC 53653]
 gi|302460581|gb|EFL23674.1| putative toxin-antitoxin system, toxin component, PIN family 
[Streptomyces himastatinicus ATCC 53653]
Length=144

 Score = 57.0 bits (136),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 41/141 (30%), Positives = 61/141 (44%), Gaps = 1/141 (0%)

Query  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60
            M  VD N+L+YA  + S  H  +   + G           W  L  F  +AT   ++  P
Sbjct  1    MIAVDTNILVYAHRSDSPFHSAAAAQIKGLAEARAPWALPWPCLHEFFSIATHPRIYQPP  60

Query  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120
               E AI Q+  WL++PS VL++    +   L +ML        +V+D  +AAL      
Sbjct  61   STAEQAIAQIDAWLSSPSVVLLSEADTYWPTLRQMLEDGKVAGPMVHDGRIAALCANSGV  120

Query  121  -SIVSYDSDFGRFEGVRWDQP  140
              + S D DF RF  +    P
Sbjct  121  RELWSADRDFSRFPALTTRNP  141



Lambda     K      H
   0.323    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128702269584


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40