BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2107 Length=98 Score E Sequences producing significant alignments: (Bits) Value gi|15841598|ref|NP_336635.1| PE family protein [Mycobacterium tu... 199 9e-50 gi|340627117|ref|YP_004745569.1| PE family protein [Mycobacteriu... 197 6e-49 gi|167967483|ref|ZP_02549760.1| PE family protein [Mycobacterium... 177 3e-43 gi|297731679|ref|ZP_06960797.1| PE family protein [Mycobacterium... 152 2e-35 gi|15827511|ref|NP_301774.1| hypothetical protein ML1053 [Mycoba... 75.5 2e-12 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 74.7 5e-12 gi|183984257|ref|YP_001852548.1| PE-PGRS family protein [Mycobac... 71.2 5e-11 gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobac... 69.3 2e-10 gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium... 68.6 3e-10 gi|296170857|ref|ZP_06852418.1| conserved hypothetical protein [... 67.8 6e-10 gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS... 67.8 6e-10 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 67.4 7e-10 gi|118616101|ref|YP_904433.1| PE-PGRS family protein [Mycobacter... 67.4 7e-10 gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare AT... 67.0 9e-10 gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_0697... 66.2 1e-09 gi|240168031|ref|ZP_04746690.1| PE family protein [Mycobacterium... 65.9 2e-09 gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium... 65.9 2e-09 gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Myco... 64.3 6e-09 gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Myco... 64.3 6e-09 gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium... 64.3 6e-09 gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 ... 63.2 1e-08 gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_121... 59.7 2e-07 gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211... 59.7 2e-07 gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 ... 59.3 2e-07 gi|118619579|ref|YP_907911.1| PE family protein [Mycobacterium u... 58.9 2e-07 gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium... 58.5 3e-07 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 58.2 4e-07 gi|333991599|ref|YP_004524213.1| PE-PGRS family protein [Mycobac... 57.8 5e-07 gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium... 56.2 1e-06 gi|240173438|ref|ZP_04752096.1| PE-PGRS family protein [Mycobact... 54.7 4e-06 gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycoba... 54.3 5e-06 gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobac... 54.3 5e-06 gi|240171455|ref|ZP_04750114.1| PE-PGRS family protein [Mycobact... 53.9 8e-06 gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium u... 52.4 2e-05 gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycob... 52.4 3e-05 gi|240167872|ref|ZP_04746531.1| PE-PGRS family protein [Mycobact... 51.6 4e-05 gi|306778954|ref|ZP_07417291.1| PE-PGRS family protein [Mycobact... 50.8 7e-05 gi|289756186|ref|ZP_06515564.1| PE-PGRS family protein [Mycobact... 50.4 8e-05 gi|308378552|ref|ZP_07482972.2| PE-PGRS family protein [Mycobact... 50.4 9e-05 gi|313656899|ref|ZP_07813779.1| PE-PGRS family protein [Mycobact... 50.4 9e-05 gi|297729572|ref|ZP_06958690.1| PE-PGRS family protein [Mycobact... 50.4 9e-05 gi|289441493|ref|ZP_06431237.1| LOW QUALITY PROTEIN: PE-PGRS fam... 50.4 9e-05 gi|306805915|ref|ZP_07442583.1| PE-PGRS family protein [Mycobact... 50.4 9e-05 gi|289747891|ref|ZP_06507269.1| PE family protein [Mycobacterium... 50.4 1e-04 gi|308231469|ref|ZP_07412546.2| PE-PGRS family protein [Mycobact... 50.1 1e-04 gi|306791666|ref|ZP_07429968.1| PE-PGRS family protein [Mycobact... 50.1 1e-04 gi|308371594|ref|ZP_07425431.2| PE-PGRS family protein [Mycobact... 50.1 1e-04 gi|308374632|ref|ZP_07436789.2| PE-PGRS family protein [Mycobact... 50.1 1e-04 gi|297632598|ref|ZP_06950378.1| PE-PGRS family protein [Mycobact... 50.1 1e-04 gi|307082252|ref|ZP_07491422.1| PE-PGRS family protein [Mycobact... 50.1 1e-04 >gi|15841598|ref|NP_336635.1| PE family protein [Mycobacterium tuberculosis CDC1551] gi|31793287|ref|NP_855780.1| hypothetical protein Mb2131 [Mycobacterium bovis AF2122/97] gi|57116945|ref|YP_177858.1| PE family protein [Mycobacterium tuberculosis H37Rv] 69 more sequence titles Length=98 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ Sbjct 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNEGF 98 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNEGF Sbjct 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNEGF 98 >gi|340627117|ref|YP_004745569.1| PE family protein [Mycobacterium canettii CIPT 140010059] gi|340005307|emb|CCC44463.1| PE family protein [Mycobacterium canettii CIPT 140010059] Length=98 Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 96/98 (98%), Positives = 98/98 (100%), Gaps = 0/98 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTT+VPPPAADYVSKKLSLFFSSHGQ Sbjct 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTRVPPPAADYVSKKLSLFFSSHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNEGF 98 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANN+GF Sbjct 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNKGF 98 >gi|167967483|ref|ZP_02549760.1| PE family protein [Mycobacterium tuberculosis H37Ra] gi|254551139|ref|ZP_05141586.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308403673|ref|ZP_07493868.2| PE family protein [Mycobacterium tuberculosis SUMu012] gi|308365658|gb|EFP54509.1| PE family protein [Mycobacterium tuberculosis SUMu012] gi|323719320|gb|EGB28461.1| PE family protein [Mycobacterium tuberculosis CDC1551A] Length=88 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%) Query 11 MLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQYQVQAARGT 70 MLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQYQVQAARGT Sbjct 1 MLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQYQVQAARGT 60 Query 71 AFHRKLVRTLANGALAYEEVEIANNEGF 98 AFHRKLVRTLANGALAYEEVEIANNEGF Sbjct 61 AFHRKLVRTLANGALAYEEVEIANNEGF 88 >gi|297731679|ref|ZP_06960797.1| PE family protein [Mycobacterium tuberculosis KZN R506] Length=74 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 74/74 (100%), Positives = 74/74 (100%), Gaps = 0/74 (0%) Query 25 MAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQYQVQAARGTAFHRKLVRTLANGA 84 MAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQYQVQAARGTAFHRKLVRTLANGA Sbjct 1 MAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQYQVQAARGTAFHRKLVRTLANGA 60 Query 85 LAYEEVEIANNEGF 98 LAYEEVEIANNEGF Sbjct 61 LAYEEVEIANNEGF 74 >gi|15827511|ref|NP_301774.1| hypothetical protein ML1053 [Mycobacterium leprae TN] gi|15827600|ref|NP_301863.1| hypothetical protein ML1183 [Mycobacterium leprae TN] gi|221229988|ref|YP_002503404.1| hypothetical protein MLBr_01053 [Mycobacterium leprae Br4923] 7 more sequence titles Length=99 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/96 (45%), Positives = 61/96 (64%), Gaps = 0/96 (0%) Query 3 FVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQQY 62 F+N +P + AAA TLE L + SNAA A +TT++ PPAAD VS L+ FFS HG+QY Sbjct 4 FLNAEPQALTAAANTLEGLSAATVASNAAAAQLTTEIAPPAADDVSILLAHFFSGHGRQY 63 Query 63 QVQAARGTAFHRKLVRTLANGALAYEEVEIANNEGF 98 Q A++G H+ L+++L + AY E AN++ Sbjct 64 QAHASQGATNHQDLIQSLLTSSSAYAGTETANHDSL 99 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/94 (47%), Positives = 61/94 (65%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVNV P + AA L +GS ++ +NAA ++TT V P AAD VS ++ F SH + Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 +YQ +A+ AFH +LV+TL +GA AY E+AN Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELAN 94 >gi|183984257|ref|YP_001852548.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177583|gb|ACC42693.1| PE-PGRS family protein [Mycobacterium marinum M] Length=733 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/96 (43%), Positives = 55/96 (58%), Gaps = 0/96 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV +P + AAA L S+GS + + +A A TT V P D VS ++ F +HGQ Sbjct 1 MSFVFAEPQYLSAAATDLASIGSTIDTAGSAAALATTGVIPAGLDEVSAGIAALFGAHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNE 96 YQ +AR FH + VR L+ GA AY E+AN + Sbjct 61 AYQELSARAALFHDEFVRVLSAGADAYASSEVANAQ 96 >gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601] gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601] Length=99 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/87 (45%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVN P + +AA+ L +GS +A N A A TT +PP AAD VS + FS+H Q Sbjct 1 MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H VRTLA + +Y Sbjct 61 AYQEVSAQAAAIHEAFVRTLALSSESY 87 >gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium intracellulare ATCC 13950] Length=176 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/94 (45%), Positives = 56/94 (60%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P ++AAA+ LE+LGS M NAA A+ TT + P AAD VS + FS++G Sbjct 1 MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 YQ +A+ A H+ +V L A +Y E E AN Sbjct 61 WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETAN 94 >gi|296170857|ref|ZP_06852418.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894513|gb|EFG74254.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=133 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/87 (49%), Positives = 58/87 (67%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA L+ +GS +AV++ A A+ TT V PPAAD VS + + F+++GQ Sbjct 1 MSFVITAPDTLAAAAGDLQGIGSAIAVADGAAATPTTAVFPPAADAVSVRTAALFAAYGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 QYQ AAR AFH +LV+TL + +Y Sbjct 61 QYQQIAARAEAFHAQLVQTLVGSSDSY 87 >gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M] gi|183177695|gb|ACC42805.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M] Length=910 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 49/87 (57%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVNV P + AAA+ L +GS + +NA A TT V D VS ++ FS HGQ Sbjct 1 MSFVNVTPEAVAAAASDLTGIGSVLGEANAVAARATTTVLAAGGDEVSAAIAALFSFHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ A+ AFH + + +ANGA Y Sbjct 61 SYQTLGAQAEAFHAQFAQLMANGAGTY 87 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/96 (44%), Positives = 59/96 (62%), Gaps = 0/96 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA+ L + S +A +N+ A+ TT V P AAD VS ++ F +H Q Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNE 96 QYQ +A AFH + V++L GA +Y E AN E Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAE 96 >gi|118616101|ref|YP_904433.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568211|gb|ABL02962.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=636 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 49/87 (57%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVNV P + AAA+ L +GS + +NA A TT V D VS ++ FS HGQ Sbjct 1 MSFVNVTPEAVAAAASDLTGIGSVLGEANAVAARATTTVLAAGGDEVSAAIAALFSFHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ A+ AFH + + +ANGA Y Sbjct 61 SYQTLGAQAEAFHAQFAQLMANGAGTY 87 >gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare ATCC 13950] Length=265 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/94 (45%), Positives = 56/94 (60%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P ++AAA+ LE+LGS M NAA A+ TT + P AAD VS + FS++G Sbjct 1 MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 YQ +A+ A H+ +V L A +Y E E AN Sbjct 61 WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETAN 94 >gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_06979 [Mycobacterium kansasii ATCC 12478] Length=99 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSF+ P + AAAA L S+G+ ++ N+A A+ TT V PPAAD VS +++ F++H Sbjct 1 MSFLTAQPDVLAAAAANLGSVGAALSAGNSAAAAPTTGVLPPAADEVSALVAVQFAAHAA 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +AR H +LV TLA A +Y Sbjct 61 TYQAVSARAAGIHDQLVATLAASAGSY 87 >gi|240168031|ref|ZP_04746690.1| PE family protein [Mycobacterium kansasii ATCC 12478] Length=399 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/96 (49%), Positives = 60/96 (63%), Gaps = 0/96 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MS +NV P M AAA L +GS M+ +NAA A TT + AAD VS ++ F++H Q Sbjct 1 MSILNVVPDVMNAAAGNLAEIGSAMSAANAAAAPPTTGLVAMAADQVSAAVTAAFATHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNE 96 YQ +A+ AFH + VRTL+NGA AY EIAN E Sbjct 61 DYQALSAKMAAFHDQFVRTLSNGAGAYLGAEIANAE 96 >gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=173 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/94 (45%), Positives = 54/94 (58%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P +LA A+ LE LGS M NAA A+ TT + P AAD VS + FS++G Sbjct 1 MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 YQ +A+ A H+ LV+ L A +Y E AN Sbjct 61 WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAAN 94 >gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Mycobacterium marinum M] gi|183176003|gb|ACC41113.1| PE family protein, PE19_1 [Mycobacterium marinum M] Length=99 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/80 (44%), Positives = 49/80 (62%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MS+V P + AAA+TL+ +GS ++ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ +A H V TL Sbjct 61 MYQAVSAQASAIHEMFVNTL 80 >gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463687|ref|YP_880590.1| PE family protein [Mycobacterium avium 104] gi|41397032|gb|AAS04893.1| PE_6 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164974|gb|ABK65871.1| PE family protein [Mycobacterium avium 104] gi|212595794|gb|ACJ35523.1| PE5 [Mycobacterium avium subsp. avium] Length=278 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/94 (45%), Positives = 54/94 (58%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P +LA A+ LE LGS M NAA A+ TT + P AAD VS + FS++G Sbjct 1 MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 YQ +A+ A H+ LV+ L A +Y E AN Sbjct 61 WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAAN 94 >gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium colombiense CECT 3035] gi|342130390|gb|EGT83705.1| PE family protein [Mycobacterium colombiense CECT 3035] Length=268 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/94 (44%), Positives = 56/94 (60%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P +LA A+ L++LGS M NAA A+ TT + P AAD VS + FS++G Sbjct 1 MSFVTTRPEALLATASMLQALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 YQ +A+ A H+ +V L + A +Y E E AN Sbjct 61 WYQQVSAQAKAVHQTMVANLNSNAGSYGETETAN 94 >gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT 3035] gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT 3035] Length=99 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/91 (42%), Positives = 53/91 (59%), Gaps = 0/91 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA L+++GS ++ NAA A+ TT V P AAD VS + F++HGQ Sbjct 1 MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVE 91 YQ +A+ A H V TL+ + +Y E Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE 91 >gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp. avium ATCC 25291] gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium] gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=99 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/87 (42%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA L+++GS ++ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H V TL+ + +Y Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSGSY 87 >gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare ATCC 13950] gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950] Length=99 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/87 (42%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA L+++GS ++ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H V TL+ + +Y Sbjct 61 MYQAVSAQAQAIHEAFVNTLSTSSGSY 87 >gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT 3035] gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT 3035] Length=99 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/87 (42%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA L+++GS ++ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H V TL+ + +Y Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSY 87 >gi|118619579|ref|YP_907911.1| PE family protein [Mycobacterium ulcerans Agy99] gi|183984578|ref|YP_001852869.1| PE family protein [Mycobacterium marinum M] gi|118571689|gb|ABL06440.1| PE family protein [Mycobacterium ulcerans Agy99] gi|183177904|gb|ACC43014.1| PE family protein [Mycobacterium marinum M] Length=99 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/88 (44%), Positives = 53/88 (61%), Gaps = 0/88 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA +L+ +GS ++ +AA + TT V P AAD VS + FS+H Q Sbjct 1 MSFVVTQPERLAAAAGSLQEVGSAVSAQSAAAVAPTTSVAPAAADQVSALTAARFSAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYE 88 YQ+ +A+ A H + V LA GA +YE Sbjct 61 LYQMVSAQAVAIHDRFVAALAAGAQSYE 88 >gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894738|gb|EFG74468.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=99 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/87 (42%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA L+++GS ++ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H V TL+ + +Y Sbjct 61 MYQAVSAQAAAIHEAFVNTLSMSSGSY 87 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/78 (42%), Positives = 48/78 (62%), Gaps = 0/78 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P ++A A+ L +GS +A +NAAV + TT + AD VS ++ F +HGQ Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 QYQVQAARGTAFHRKLVR 78 YQ +A+ +AFH + V+ Sbjct 61 AYQTVSAQASAFHAQFVQ 78 >gi|333991599|ref|YP_004524213.1| PE-PGRS family protein [Mycobacterium sp. JDM601] gi|333487567|gb|AEF36959.1| PE-PGRS family protein [Mycobacterium sp. JDM601] Length=99 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/83 (46%), Positives = 50/83 (61%), Gaps = 0/83 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P +LAA A L ++GS +A +AA AS TT V P AAD VS ++ F++HGQ Sbjct 1 MSFVTTQPEALLAAVANLRAIGSSLAAHSAAAASPTTGVVPAAADQVSALTAVQFANHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANG 83 YQ + + A H V L+NG Sbjct 61 SYQAVSTQAVAVHEMFVNALSNG 83 >gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899880|gb|EFG79324.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=99 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/91 (42%), Positives = 52/91 (58%), Gaps = 0/91 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA +L+S+GS + NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALSAAAGSLQSIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVE 91 YQ +A+ A H V TL+ + +Y E Sbjct 61 MYQAVSAQAAAIHEMFVNTLSMSSGSYAVTE 91 >gi|240173438|ref|ZP_04752096.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=252 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/94 (47%), Positives = 55/94 (59%), Gaps = 0/94 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P M+ AAA L +GS + ++AAVA TT V P AAD VS ++ F+SHGQ Sbjct 1 MSFVVAQPVWMVEAAAVLARVGSAVDAADAAVARATTTVAPAAADEVSVAVAALFASHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIAN 94 YQV + R AF ++ VR L A AY E N Sbjct 61 AYQVLSVRAAAFEQQFVRALVAAANAYGGAEAVN 94 >gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycobacterium marinum M] gi|183176006|gb|ACC41116.1| PE family protein, PE19 [Mycobacterium marinum M] Length=99 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAAA L+ +G+ M+ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H V TLA + +Y Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87 >gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobacterium sp. JDM601] gi|333486510|gb|AEF35902.1| PE-PGRS family protein [Mycobacterium sp. JDM601] Length=99 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/87 (43%), Positives = 51/87 (59%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFVN P + AAA L ++GS ++ NAA A+ TT V P AAD VS + F++H Sbjct 1 MSFVNTQPEALTAAAGNLAAIGSALSAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAS 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H+ V TL + A +Y Sbjct 61 MYQSISAQAEAIHQAFVATLNSSANSY 87 >gi|240171455|ref|ZP_04750114.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=157 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/80 (42%), Positives = 48/80 (60%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MS++ V P +LA A++L S+GS + +NAA A T +V AD VS +++ FS H + Sbjct 1 MSYLIVAPESILATASSLSSIGSTITSANAAAAPATLEVLAAGADEVSAAIAVLFSEHAR 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A AFH + VR L Sbjct 61 DYQALSAHAAAFHEQFVRAL 80 >gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium ulcerans Agy99] gi|118570577|gb|ABL05328.1| PE family protein [Mycobacterium ulcerans Agy99] Length=99 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/87 (43%), Positives = 49/87 (57%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAAA L+ +G+ M+ NAA A+ TT V P AAD VS + F+ H Q Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ H V TLA + +Y Sbjct 61 MYQAVSAQAAVIHEMFVNTLATSSGSY 87 >gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478] Length=99 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/87 (43%), Positives = 52/87 (60%), Gaps = 0/87 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + AAA++L+ +G+ M+ NAA A+ TT V P AAD VS + F++H Q Sbjct 1 MSFVTTQPEALAAAASSLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAY 87 YQ +A+ A H V TLA + +Y Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87 >gi|240167872|ref|ZP_04746531.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=477 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/96 (42%), Positives = 57/96 (60%), Gaps = 0/96 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV P + A+A L +GS ++ +NAA A+ T V AD VS ++ F++HGQ Sbjct 1 MSFVITSPEMLATASAQLAGIGSAISEANAAAAAPITGVLAAGADEVSAAIAAMFTAHGQ 60 Query 61 QYQVQAARGTAFHRKLVRTLANGALAYEEVEIANNE 96 YQ +A+ AFH + V+T+A A AY E+AN E Sbjct 61 AYQAISAQAEAFHNQFVQTVAANAAAYASTEVANVE 96 >gi|306778954|ref|ZP_07417291.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu002] gi|308328074|gb|EFP16925.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu002] Length=142 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|289756186|ref|ZP_06515564.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] gi|289696773|gb|EFD64202.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] Length=276 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|308378552|ref|ZP_07482972.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu009] gi|308352216|gb|EFP41067.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu009] Length=154 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 75 AYQALSAQAAAFHQQFVQTL 94 >gi|313656899|ref|ZP_07813779.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=169 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|297729572|ref|ZP_06958690.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=174 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|289441493|ref|ZP_06431237.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289414412|gb|EFD11652.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis T46] Length=120 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|306805915|ref|ZP_07442583.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu007] gi|308347590|gb|EFP36441.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu007] Length=132 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|289747891|ref|ZP_06507269.1| PE family protein [Mycobacterium tuberculosis 02_1987] gi|289688419|gb|EFD55907.1| PE family protein [Mycobacterium tuberculosis 02_1987] Length=130 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 75 AYQALSAQAAAFHQQFVQTL 94 >gi|308231469|ref|ZP_07412546.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu001] gi|308217214|gb|EFO76613.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu001] Length=158 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 75 AYQALSAQAAAFHQQFVQTL 94 >gi|306791666|ref|ZP_07429968.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu005] gi|308339813|gb|EFP28664.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu005] Length=126 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|308371594|ref|ZP_07425431.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu004] gi|308336210|gb|EFP25061.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu004] Length=154 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 75 AYQALSAQAAAFHQQFVQTL 94 >gi|308374632|ref|ZP_07436789.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu006] gi|308341308|gb|EFP30159.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu006] Length=162 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 15 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 74 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 75 AYQALSAQAAAFHQQFVQTL 94 >gi|297632598|ref|ZP_06950378.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=165 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 >gi|307082252|ref|ZP_07491422.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu011] gi|308360120|gb|EFP48971.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu011] Length=125 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 0/80 (0%) Query 1 MSFVNVDPFGMLAAAATLESLGSHMAVSNAAVASVTTKVPPPAADYVSKKLSLFFSSHGQ 60 MSFV+V P ++AAA L +GS ++ +NAA A+ TT V AD VS ++ FS H Q Sbjct 1 MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGADEVSAAIAALFSGHAQ 60 Query 61 QYQVQAARGTAFHRKLVRTL 80 YQ +A+ AFH++ V+TL Sbjct 61 AYQALSAQAAAFHQQFVQTL 80 Lambda K H 0.316 0.126 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130183417542 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40