BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2108
Length=243
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841599|ref|NP_336636.1| PPE family protein [Mycobacterium t... 504 3e-141
gi|289750701|ref|ZP_06510079.1| PPE family protein [Mycobacteriu... 503 1e-140
gi|188523821|gb|ACD61709.1| P27 [Mycobacterium bovis] 502 2e-140
gi|340627118|ref|YP_004745570.1| PPE family protein [Mycobacteri... 485 2e-135
gi|148823319|ref|YP_001288073.1| PPE family protein [Mycobacteri... 418 3e-115
gi|221230076|ref|YP_002503492.1| PPE-family protein [Mycobacteri... 173 2e-41
gi|15827599|ref|NP_301862.1| PPE-family protein [Mycobacterium l... 173 2e-41
gi|699113|gb|AAA62879.1| u1756z [Mycobacterium leprae] 165 5e-39
gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 139 5e-31
gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacteriu... 137 2e-30
gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 131 9e-29
gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacteriu... 127 2e-27
gi|240171968|ref|ZP_04750627.1| PPE family protein [Mycobacteriu... 124 1e-26
gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacteri... 124 1e-26
gi|333989927|ref|YP_004522541.1| PPE family protein PPE51_2 [Myc... 123 2e-26
gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium t... 122 3e-26
gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tu... 122 4e-26
gi|289750372|ref|ZP_06509750.1| PPE family protein [Mycobacteriu... 122 4e-26
gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ... 122 4e-26
gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacteriu... 122 5e-26
gi|289757904|ref|ZP_06517282.1| PPE family protein [Mycobacteriu... 122 5e-26
gi|254550809|ref|ZP_05141256.1| PPE family protein [Mycobacteriu... 122 5e-26
gi|289745767|ref|ZP_06505145.1| PPE family protein [Mycobacteriu... 122 6e-26
gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacteriu... 121 8e-26
gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacteri... 121 8e-26
gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacteriu... 121 1e-25
gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacteriu... 120 1e-25
gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacteriu... 120 2e-25
gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacteri... 120 2e-25
gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium b... 120 2e-25
gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacteriu... 120 2e-25
gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium t... 120 2e-25
gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacteri... 120 2e-25
gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium t... 120 2e-25
gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacteriu... 120 2e-25
gi|240173124|ref|ZP_04751782.1| PPE family protein [Mycobacteriu... 120 2e-25
gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium ... 119 3e-25
gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacteriu... 119 3e-25
gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacteriu... 119 5e-25
gi|289757814|ref|ZP_06517192.1| predicted protein [Mycobacterium... 118 7e-25
gi|183980708|ref|YP_001848999.1| PPE family protein [Mycobacteri... 117 1e-24
gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacteriu... 117 1e-24
gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacteriu... 117 1e-24
gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium t... 117 1e-24
gi|240171262|ref|ZP_04749921.1| PPE family protein [Mycobacteriu... 117 1e-24
gi|289761860|ref|ZP_06521238.1| PPE family protein [Mycobacteriu... 117 2e-24
gi|240169713|ref|ZP_04748372.1| PPE family protein [Mycobacteriu... 117 2e-24
gi|240169716|ref|ZP_04748375.1| PPE family protein [Mycobacteriu... 117 2e-24
gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 117 2e-24
gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Myco... 116 3e-24
>gi|15841599|ref|NP_336636.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|31793288|ref|NP_855781.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57116946|ref|YP_177859.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
74 more sequence titles
Length=243
Score = 504 bits (1299), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ
Sbjct 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL
Sbjct 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE 180
KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE
Sbjct 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE 180
Query 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH
Sbjct 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
Query 241 PKF 243
PKF
Sbjct 241 PKF 243
>gi|289750701|ref|ZP_06510079.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289691288|gb|EFD58717.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=243
Score = 503 bits (1294), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 242/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ
Sbjct 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL
Sbjct 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE 180
KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYD
Sbjct 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDA 180
Query 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH
Sbjct 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
Query 241 PKF 243
PKF
Sbjct 241 PKF 243
>gi|188523821|gb|ACD61709.1| P27 [Mycobacterium bovis]
Length=243
Score = 502 bits (1293), Expect = 2e-140, Method: Compositional matrix adjust.
Identities = 242/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ
Sbjct 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
SSQALIQQTLPYVQWLTTTAEHAHK AIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL
Sbjct 61 SSQALIQQTLPYVQWLTTTAEHAHKIAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE 180
KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE
Sbjct 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE 180
Query 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH
Sbjct 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
Query 241 PKF 243
PKF
Sbjct 241 PKF 243
>gi|340627118|ref|YP_004745570.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005308|emb|CCC44464.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=243
Score = 485 bits (1249), Expect = 2e-135, Method: Compositional matrix adjust.
Identities = 232/243 (96%), Positives = 236/243 (98%), Gaps = 0/243 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ
Sbjct 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
SSQALIQQTLPYVQWLTTTAEHAH+TA QLTAAANAYEQARAAMVPPAMVRANRVQT L
Sbjct 61 SSQALIQQTLPYVQWLTTTAEHAHRTATQLTAAANAYEQARAAMVPPAMVRANRVQTIAL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE 180
KA NWFGQFSTRIA+KEADYEQMWFQDALVME YWEAVQEAIQSTS FEDPP+MADDYDE
Sbjct 121 KAFNWFGQFSTRIAEKEADYEQMWFQDALVMETYWEAVQEAIQSTSQFEDPPKMADDYDE 180
Query 181 AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH 240
AWMLNTVFDYHNENAKEE IHLVPDVNKERGPIELVTK+DKEGTIRLVYDGEPTFSYKEH
Sbjct 181 AWMLNTVFDYHNENAKEETIHLVPDVNKERGPIELVTKLDKEGTIRLVYDGEPTFSYKEH 240
Query 241 PKF 243
PKF
Sbjct 241 PKF 243
>gi|148823319|ref|YP_001288073.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148721846|gb|ABR06471.1| PPE family protein [Mycobacterium tuberculosis F11]
Length=213
Score = 418 bits (1075), Expect = 3e-115, Method: Compositional matrix adjust.
Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 42 TKVGLQSALDTLLESYRGQSSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQAR 101
+KVGLQSALDTLLESYRGQSSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQAR
Sbjct 12 SKVGLQSALDTLLESYRGQSSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQAR 71
Query 102 AAMVPPAMVRANRVQTTVLKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEA 161
AAMVPPAMVRANRVQTTVLKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEA
Sbjct 72 AAMVPPAMVRANRVQTTVLKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEA 131
Query 162 IQSTSHFEDPPEMADDYDEAWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDK 221
IQSTSHFEDPPEMADDYDEAWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDK
Sbjct 132 IQSTSHFEDPPEMADDYDEAWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDK 191
Query 222 EGTIRLVYDGEPTFSYKEHPKF 243
EGTIRLVYDGEPTFSYKEHPKF
Sbjct 192 EGTIRLVYDGEPTFSYKEHPKF 213
>gi|221230076|ref|YP_002503492.1| PPE-family protein [Mycobacterium leprae Br4923]
gi|219933183|emb|CAR71277.1| PPE-family protein [Mycobacterium leprae Br4923]
Length=417
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/172 (53%), Positives = 110/172 (64%), Gaps = 0/172 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
M +F AL PE NSTR+YLGPGS PIL AA W LA EL GLQSA++ LL ++ G+
Sbjct 1 MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKELTAAAQGLQSAVEALLTTFEGE 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
S+ AL ++ PY +WLT A A TA QLT AANAYE A VPP MV NR Q +L
Sbjct 61 SAAALAERVTPYEKWLTQNAASAELTATQLTVAANAYETAFTMTVPPLMVFVNRAQACLL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPP 172
N FGQ ST IA+KEA+Y +MW QDA M +Y +V EA+ +T F PP
Sbjct 121 IMSNIFGQNSTAIAEKEAEYTEMWIQDAAAMTSYQASVLEAVGATKAFTAPP 172
>gi|15827599|ref|NP_301862.1| PPE-family protein [Mycobacterium leprae TN]
gi|4493788|emb|CAB39148.1| putative PPE protein [Mycobacterium leprae]
gi|13093150|emb|CAC31563.1| PPE-family protein [Mycobacterium leprae]
Length=421
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/172 (53%), Positives = 110/172 (64%), Gaps = 0/172 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
M +F AL PE NSTR+YLGPGS PIL AA W LA EL GLQSA++ LL ++ G+
Sbjct 1 MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKELTAAAQGLQSAVEALLTTFEGE 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
S+ AL ++ PY +WLT A A TA QLT AANAYE A VPP MV NR Q +L
Sbjct 61 SAAALAERVTPYEKWLTQNAASAELTATQLTVAANAYETAFTMTVPPLMVFVNRAQACLL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPP 172
N FGQ ST IA+KEA+Y +MW QDA M +Y +V EA+ +T F PP
Sbjct 121 IMSNIFGQNSTAIAEKEAEYTEMWIQDAAAMTSYQASVLEAVGATKAFTAPP 172
>gi|699113|gb|AAA62879.1| u1756z [Mycobacterium leprae]
Length=204
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/165 (54%), Positives = 107/165 (65%), Gaps = 0/165 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ 60
M +F AL PE NSTR+YLGPGS PIL AA W LA EL GLQSA++ LL ++ G+
Sbjct 1 MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKELTAAAQGLQSAVEALLTTFEGE 60
Query 61 SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL 120
S+ AL ++ PY +WLT A A TA QLT AANAYE A VPP MV NR Q +L
Sbjct 61 SAAALAERVTPYEKWLTQNAASAELTATQLTVAANAYETAFTMTVPPLMVFVNRAQACLL 120
Query 121 KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQST 165
N FGQ ST IA+KEA+Y +MW QDA M +Y +V EA+ +T
Sbjct 121 IMSNIFGQNSTAIAEKEAEYTEMWIQDATAMTSYQASVLEAVGAT 165
>gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M]
gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M]
Length=427
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/173 (48%), Positives = 103/173 (60%), Gaps = 2/173 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLE-SYRGQS 61
+F ALPPEINS R+Y+GPGSGP+LAAA W+ LA+EL T G +S LD L S+RG +
Sbjct 2 DFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S ++ PYV W+T TA A Q AA+AYE A AA VPP ++ ANR L
Sbjct 62 SASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEM 174
N FGQ + IA EA Y +MW QDA M Y + A Q T F +PP++
Sbjct 122 FTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVT-PFTEPPQI 173
>gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=391
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/203 (42%), Positives = 115/203 (57%), Gaps = 1/203 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSAL-DTLLESYRGQS 61
+F ALPPEINS R+Y GPGSG +LAAAQ W+ +A +L +QS + L+ +RG S
Sbjct 2 DFGALPPEINSARMYTGPGSGSLLAAAQVWDGVAIDLYNAASAVQSVIWGLLVGPWRGTS 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
+ ++ PYV WL TTA A TA Q+ AA AYE A A VPPA++ NR+Q L
Sbjct 62 AGLMVAAASPYVTWLGTTAAQAELTADQVRTAATAYEAAFATTVPPAVIAGNRIQLLTLI 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
A N FGQ + IA EADY +MW QDA M Y + A ++ + F++ PE+ +
Sbjct 122 ASNLFGQNTPAIAVTEADYGEMWAQDAAAMYGYAGSAAVAAETLTPFDESPEITNAGGLV 181
Query 182 WMLNTVFDYHNENAKEEVIHLVP 204
V + + A ++I VP
Sbjct 182 QQAGAVEEATDTAAANQLISTVP 204
>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/200 (41%), Positives = 105/200 (53%), Gaps = 2/200 (1%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLL-ESYRG 59
M +F A PPE NS R+Y GPG + AAA WN LA+EL T +G + L E + G
Sbjct 1 MIDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLG 60
Query 60 QSSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTV 119
+S ++ Q PYV W+ TTA A +TA Q+ AAA AYE A AA VPP +V ANR QT
Sbjct 61 PASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQ 120
Query 120 LKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYD 179
L A N G + IA EA Y +MW QDA M +Y A + F P++A+
Sbjct 121 LLATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSY-AGQSAAATKVAPFTAAPQIANPSA 179
Query 180 EAWMLNTVFDYHNENAKEEV 199
+A V + +A
Sbjct 180 QATQGTAVANATGNSAASST 199
>gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=379
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/174 (48%), Positives = 108/174 (63%), Gaps = 3/174 (1%)
Query 7 LPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYR-GQSSQAL 65
LPPEINS RIY GPG G +LAAA+GW+A+A+EL VG +S + +L Y G +S ++
Sbjct 6 LPPEINSARIYSGPGPGSLLAAARGWDAVATELTSAAVGYRSVISSLTAMYWWGPASVSM 65
Query 66 IQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKAINW 125
+ P+V+WL TTA A ++A Q AAA A+EQA A VPPA+V ANR Q L A N+
Sbjct 66 LATAGPFVEWLETTAAQAKESADQSRAAAAAFEQAHAMTVPPAVVAANRTQLKALIASNF 125
Query 126 FGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYD 179
FGQ + IA EA Y +MW QDA M Y + A + + F PE++ D D
Sbjct 126 FGQNTAAIAATEAQYAEMWAQDAAAMYGY-ASNSAAATALTPFSS-PELSVDPD 177
>gi|240171968|ref|ZP_04750627.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=414
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/176 (45%), Positives = 99/176 (57%), Gaps = 2/176 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLES-YRGQS 61
+F A+PPEINS RIY GPGSGP++AAA W+AL +EL G S + L S + G +
Sbjct 25 DFGAIPPEINSARIYSGPGSGPLIAAATAWDALTAELTAASAGYVSVISELTSSQWLGPA 84
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S A++ +P+ W++ TA A T IQ AAA A+E A A VPP +V ANR L
Sbjct 85 SMAMVATIVPHQVWISATARSAELTGIQARAAAAAFETAHAMTVPPPVVAANRSLLLTLI 144
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADD 177
A N+FGQ + IA E Y +MW QDA M Y + A T F PP AD
Sbjct 145 ATNFFGQNTPAIASTEFHYAEMWAQDAAAMYGYAASCASASMLTP-FTAPPRTADS 199
>gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacterium marinum M]
gi|183174803|gb|ACC39913.1| PPE family protein [Mycobacterium marinum M]
Length=469
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/174 (48%), Positives = 104/174 (60%), Gaps = 2/174 (1%)
Query 4 FWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLE-SYRGQSS 62
+ A PPEINS R+Y GPGSGP+LAAA WN LA+EL+ T S + L+ S+ G S+
Sbjct 3 YAAFPPEINSGRMYTGPGSGPMLAAAVAWNGLAAELQSTAASYSSVISGLISGSWVGPSA 62
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
A+ PYV W+ +TA A + A Q TAAA AYE A AA VPP ++ NR Q L A
Sbjct 63 LAMAAAAGPYVTWVNSTAAQATQAADQATAAAGAYEIAFAAHVPPPVIATNRSQLAALVA 122
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMAD 176
N GQ + IA EA Y +MW QDA+ M+ Y A A Q T F +PP++ D
Sbjct 123 SNLVGQNTAAIAATEAQYAEMWVQDAIAMDTYASASAAASQVTP-FSEPPQIVD 175
>gi|333989927|ref|YP_004522541.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
gi|333485895|gb|AEF35287.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
Length=373
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/230 (39%), Positives = 120/230 (53%), Gaps = 10/230 (4%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLL-ESYRG 59
M +F LPPE+ ST++Y GPGSGP+LA+A W+AL+ +L +G + L L E + G
Sbjct 1 MLDFGILPPEVISTQMYTGPGSGPLLASAAAWDALSGQLNAFALGYSTTLTGLQDEGWTG 60
Query 60 QSSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTV 119
SSQA++ PY+ W++ TA A A Q AAA AYE ARAA VPPA+V NR Q
Sbjct 61 ASSQAMLAAAAPYIAWVSQTATQAEHAATQSRAAAAAYESARAATVPPAVVTTNRTQLAN 120
Query 120 LKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYD 179
L A N FGQ + I+ EA Y QMW QDA M Y A Q + F++PP+ +
Sbjct 121 LVATNIFGQNTALISALEAAYAQMWAQDAAAMHGYATTAYTATQ-LAPFQEPPQTTNSAA 179
Query 180 EAWMLNTVFDY--------HNENAKEEVIHLVPDVNKERGPIELVTKVDK 221
A +++A + VI N GP+ T + +
Sbjct 180 AASQALAPAAALGTAAASQGSQSAADGVIDGASTFNTLSGPVGFATAMSR 229
>gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792989|ref|NP_855482.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57116916|ref|YP_177840.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
57 more sequence titles
Length=423
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=423
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|289750372|ref|ZP_06509750.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289690959|gb|EFD58388.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=333
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118569437|gb|ABL04188.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=392
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/180 (42%), Positives = 105/180 (59%), Gaps = 2/180 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLL-ESYRGQS 61
+F ALPPE+NS R+Y GPGS P+++AA WN LASEL T G + + L E + G +
Sbjct 2 DFGALPPEVNSGRMYTGPGSTPMVSAASAWNRLASELSFTADGYERVIKALSGEEWFGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ +TA A + A Q AA A+E A +VPP ++ +NR+Q L
Sbjct 62 SAMMLEAITPYVTWMRSTAVQAERAAKQAEAAVAAFEAAFTGVVPPPLIASNRMQLMTLM 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
A N +GQ++ IA EA Y +MW QDA M Y + A + T+ F PPE A+ A
Sbjct 122 ARNIYGQYTAEIASLEAQYAEMWAQDARAMYTYAGSSASATKITA-FTPPPETANPAASA 180
>gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709457|gb|EFD73473.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=423
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|289757904|ref|ZP_06517282.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289713468|gb|EFD77480.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=305
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|254550809|ref|ZP_05141256.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=284
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|289745767|ref|ZP_06505145.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686295|gb|EFD53783.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=418
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/174 (45%), Positives = 98/174 (57%), Gaps = 1/174 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMAD 176
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+ +
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQTTN 174
>gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538909|gb|EFD43487.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=423
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QD+ M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331211|emb|CCC26893.1| PPE family protein [Mycobacterium africanum GM041182]
Length=423
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/171 (46%), Positives = 97/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QD+ M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=384
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686386|gb|EFD53874.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=385
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMHGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308362459|gb|EFP51310.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=376
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004901|emb|CCC44047.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=385
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|224990087|ref|YP_002644774.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|289443162|ref|ZP_06432906.1| PPE family protein [Mycobacterium tuberculosis T46]
18 more sequence titles
Length=385
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=385
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661502|ref|YP_001283025.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148822911|ref|YP_001287665.1| PPE family protein [Mycobacterium tuberculosis F11]
39 more sequence titles
Length=385
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005001|emb|CCC44149.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=423
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/171 (47%), Positives = 98/171 (58%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA A Q A AYE A AA VPP ++ ANR Q VL A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAAAQARLAVAAYEAAFAATVPPPVIAANRAQLMVLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881383|gb|AAK46014.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323719795|gb|EGB28909.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=385
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/208 (41%), Positives = 112/208 (54%), Gaps = 9/208 (4%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420374|gb|EFD17575.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=423
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/171 (46%), Positives = 96/171 (57%), Gaps = 1/171 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F LPPEINS R+Y GPG GP+LAAA W+ LA EL T G S L L ++ G SS
Sbjct 2 DFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSS 61
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
++ PYV W++ TA HA Q A AYE A AA VPP ++ ANR Q L A
Sbjct 62 TSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMGLIA 121
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPE 173
N FGQ + I EA Y +MW QDA M Y + A + T+ F +PP+
Sbjct 122 TNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTA-FTEPPQ 171
>gi|240173124|ref|ZP_04751782.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=255
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/189 (44%), Positives = 109/189 (58%), Gaps = 2/189 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLE-SYRGQS 61
+F ALPPEINS R+Y GPGSGP++AAA W LA +LE S + L +RG +
Sbjct 26 DFTALPPEINSGRMYSGPGSGPLMAAAAAWGRLADDLETAATAYSSLILELTGLPWRGPA 85
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
+ A++ LP+V WL+TTA A + AIQ +AAA A+E A A VPP ++ ANR L
Sbjct 86 ADAMVASVLPFVSWLSTTAALAEQAAIQASAAAAAFELAFALTVPPPVIVANRALLMTLV 145
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
A NWFGQ + IA EA Y +MW QDA M Y A + F PP++ + Y +
Sbjct 146 ATNWFGQNTPAIATAEAHYAEMWVQDATAMHEY-AAAAAVASVLTPFTPPPKVTNPYPAS 204
Query 182 WMLNTVFDY 190
+TV +Y
Sbjct 205 IPWDTVLEY 213
>gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|121493259|emb|CAL71730.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
Length=385
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/207 (42%), Positives = 111/207 (54%), Gaps = 9/207 (4%)
Query 4 FWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQSS 62
F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +S
Sbjct 3 FGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPAS 62
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
+++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 63 TLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLVT 122
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEAW 182
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 123 HNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAAT 181
Query 183 MLNTVFDYHNENAK-------EEVIHL 202
L+ V +A E + HL
Sbjct 182 QLSAVAKAAGTSAGAAQSAIAELIAHL 208
>gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=356
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/210 (41%), Positives = 115/210 (55%), Gaps = 8/210 (3%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEA 181
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP A
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVT-PFAPPPNTTSPSAAA 180
Query 182 WMLNTVFDYHN------ENAKEEVIHLVPD 205
L+ V ++A E+I +P+
Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPN 210
>gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131196|gb|EGT84477.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=395
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/166 (48%), Positives = 96/166 (58%), Gaps = 1/166 (0%)
Query 1 MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLL-ESYRG 59
M +F ALPPEINS R+Y GPGSGP+LAAA WN +A+E+ S + L E + G
Sbjct 1 MLDFAALPPEINSARMYSGPGSGPMLAAAAAWNTMAAEMRAAAASYGSVVTELSSEGWLG 60
Query 60 QSSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTV 119
SS +++ PY+ WL TA A + Q AAA AYE A A VPPA+V ANR Q +
Sbjct 61 PSSMSMLAAAAPYLAWLDGTATQAEEVGSQAFAAATAYESAFAMTVPPAVVAANRAQLAM 120
Query 120 LKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQST 165
L A N FGQ + IA EA Y +MW QDA M Y A A Q T
Sbjct 121 LVATNIFGQNTPAIAATEAQYAEMWAQDAGAMNGYATASSAAAQFT 166
>gi|289757814|ref|ZP_06517192.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289713378|gb|EFD77390.1| predicted protein [Mycobacterium tuberculosis T85]
Length=298
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/171 (46%), Positives = 102/171 (60%), Gaps = 2/171 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPP 172
N FGQ + IA EA Y +MW QDA+ M Y + A + T F PP
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTP-FAPPP 171
>gi|183980708|ref|YP_001848999.1| PPE family protein [Mycobacterium marinum M]
gi|183174034|gb|ACC39144.1| PPE family protein [Mycobacterium marinum M]
Length=444
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/171 (43%), Positives = 97/171 (57%), Gaps = 2/171 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLES-YRGQS 61
+F ALPPEINS R+Y GPGS P++ AA+ W LA+EL T S + L + ++G S
Sbjct 2 DFGALPPEINSARMYAGPGSAPLVQAARAWGRLANELNATAASYSSVIAGLGAADWQGPS 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
+ ++ PYV W+ +TA A + A Q +AANAYE A AA+VPP + ANR L
Sbjct 62 ALSMAAAAAPYVAWMRSTAAQAEQAAAQAISAANAYESAHAAIVPPGQIAANRSTMLSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPP 172
N FGQ + IA EADY +MW QD + M+ Y A + F PP
Sbjct 122 RSNIFGQNTPAIATSEADYSEMWAQDIVAMDGY-AGTSAAATDLAPFTSPP 171
>gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306790362|ref|ZP_07428684.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306794889|ref|ZP_07433191.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308325139|gb|EFP13990.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308333218|gb|EFP22069.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308336675|gb|EFP25526.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
Length=380
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/153 (49%), Positives = 97/153 (64%), Gaps = 1/153 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESY-RGQS 61
+F LPPE+NS R+Y GPG+G +LAAA GW++LA+EL T S L L + RG +
Sbjct 2 DFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
++++ PY+ WL TTAE +TAIQ AAA A+EQA A +PP +V ANR+Q L
Sbjct 62 AESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLALI 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENY 154
A N+FGQ + IA EA Y +MW QDA M Y
Sbjct 122 ATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGY 154
>gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=480
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/153 (49%), Positives = 97/153 (64%), Gaps = 1/153 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESY-RGQS 61
+F LPPE+NS R+Y GPG+G +LAAA GW++LA+EL T S L L + RG +
Sbjct 2 DFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
++++ PY+ WL TTAE +TAIQ AAA A+EQA A +PP +V ANR+Q L
Sbjct 62 AESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLALI 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENY 154
A N+FGQ + IA EA Y +MW QDA M Y
Sbjct 122 ATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGY 154
>gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|31794312|ref|NP_856805.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57117065|ref|YP_177935.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
69 more sequence titles
Length=380
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/153 (49%), Positives = 97/153 (64%), Gaps = 1/153 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESY-RGQS 61
+F LPPE+NS R+Y GPG+G +LAAA GW++LA+EL T S L L + RG +
Sbjct 2 DFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
++++ PY+ WL TTAE +TAIQ AAA A+EQA A +PP +V ANR+Q L
Sbjct 62 AESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLALI 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENY 154
A N+FGQ + IA EA Y +MW QDA M Y
Sbjct 122 ATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGY 154
>gi|240171262|ref|ZP_04749921.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=415
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/180 (44%), Positives = 103/180 (58%), Gaps = 1/180 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS 62
+F ALPPEINS R+Y+GPGSGP+LAAA W++LA+ L T S + L ++G +S
Sbjct 4 DFGALPPEINSGRMYIGPGSGPMLAAAAAWDSLAAGLHSTAASYSSVISGLTAGWQGPAS 63
Query 63 QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA 122
+ PY W+ TA A +TA Q AA A+E A AA VPP V ANR Q L A
Sbjct 64 ITMAAAAAPYTAWINATAAQAEQTATQARVAAVAFETAFAATVPPPAVTANRAQLMALIA 123
Query 123 INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDEAW 182
N+FGQ + I +A+Y +MW QDA M Y + A Q T F +PP++A+ W
Sbjct 124 TNFFGQNTPAIMGTQAEYIEMWAQDAAAMYGYAGSSATASQVT-PFSEPPQIANPAGTEW 182
>gi|289761860|ref|ZP_06521238.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709366|gb|EFD73382.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=198
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/153 (48%), Positives = 95/153 (63%), Gaps = 1/153 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTL-LESYRGQS 61
+F ALPPE+NS R+Y GPGS P++AAA WN LA+EL VG + + TL E + G +
Sbjct 2 DFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S +++ PYV W+ TA A + A Q AAA AYE A AA+VPP ++ ANR + T L
Sbjct 62 STLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENY 154
N FGQ + IA EA Y +MW QDA+ M Y
Sbjct 122 THNVFGQNTASIAATEAQYAEMWAQDAMAMYGY 154
>gi|240169713|ref|ZP_04748372.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=445
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/151 (47%), Positives = 90/151 (60%), Gaps = 0/151 (0%)
Query 4 FWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSSQ 63
F LPPE+NS R+Y GPG GP+LAAA W+ LAS+L+ QS + L + G +S
Sbjct 3 FAMLPPEVNSGRMYAGPGPGPMLAAAAAWDGLASDLDSAADACQSVVSQLTSGWLGPAST 62
Query 64 ALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKAI 123
++ Y+ WL T+A A +TA Q AAA AYE+A A VPP+++ ANR Q L A
Sbjct 63 SMATAASGYLAWLRTSAGQAEQTARQAMAAATAYEEAFATTVPPSVIAANRAQLAALMAT 122
Query 124 NWFGQFSTRIADKEADYEQMWFQDALVMENY 154
N GQ + IA EADY +MW QDA M Y
Sbjct 123 NLLGQNTPAIAATEADYAEMWAQDAAAMYGY 153
>gi|240169716|ref|ZP_04748375.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=453
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/153 (46%), Positives = 93/153 (61%), Gaps = 1/153 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLL-ESYRGQS 61
+F ALPPEINS R+Y GPGSGP++AAA W+ +A+EL Q+ + L + +RG +
Sbjct 2 DFGALPPEINSGRMYAGPGSGPMMAAATSWDMIAAELRSMGTVYQAVISALTSQGWRGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S A++ PY+ WL+ T+ A +TA Q AAA A+E A VPP ++ ANR Q L
Sbjct 62 SAAMLGAAEPYIAWLSATSAQAEQTATQAKAAAAAFETAFMMTVPPPVIAANRAQLAALV 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENY 154
N+FGQ + IA EA Y +MW QDA M Y
Sbjct 122 TTNFFGQNTAAIAATEAQYGEMWAQDATAMYGY 154
>gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478]
Length=401
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/170 (48%), Positives = 100/170 (59%), Gaps = 2/170 (1%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLL-ESYRGQS 61
+F LPPEINS R+Y GPGSGP+LAAA W +LA+EL T + S L L E + G +
Sbjct 6 DFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGPA 65
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S ++ PYV WL TTA A +TA+Q AAA AYE A A VPP ++ ANR Q L
Sbjct 66 SASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMALI 125
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDP 171
A N GQ + IA EA Y +MW QDA+ M Y + A Q S F +P
Sbjct 126 ATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQ-LSPFVEP 174
>gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Mycobacterium marinum M]
gi|183174854|gb|ACC39964.1| PPE family protein, PPE51 [Mycobacterium marinum M]
Length=382
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/153 (51%), Positives = 96/153 (63%), Gaps = 1/153 (0%)
Query 3 NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLE-SYRGQS 61
+F LPPE+NS R+Y GPGSG +LAAA W+ALA+EL T S L L + S+RG +
Sbjct 2 DFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGPA 61
Query 62 SQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLK 121
S+++ PYV WL TAE + AIQ AA A+EQA A VPP +V ANR Q VL
Sbjct 62 SESMAASAAPYVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVLI 121
Query 122 AINWFGQFSTRIADKEADYEQMWFQDALVMENY 154
A N+FGQ ++ IA EA Y +MW QDA M Y
Sbjct 122 ATNFFGQNTSAIAANEAQYAEMWAQDAAAMYGY 154
Lambda K H
0.315 0.129 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 336904708980
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40