BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2109c
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
gi|90109389|pdb|2FHH|A Chain A, Crystal Structure Of Mycobacteri... 499 1e-139
gi|15609246|ref|NP_216625.1| proteasome (alpha subunit) PrcA [My... 499 2e-139
gi|90109361|pdb|2FHG|A Chain A, Crystal Structure Of Mycobacteri... 499 2e-139
gi|254364916|ref|ZP_04980962.1| proteasome (alpha subunit) prcA ... 497 6e-139
gi|15841601|ref|NP_336638.1| proteasome, alpha subunit [Mycobact... 496 1e-138
gi|31793289|ref|NP_855782.1| proteasome (alpha subunit) PrcA [My... 493 1e-137
gi|258588450|pdb|3HF9|A Chain A, Crystal Structure Of Mycobacter... 480 6e-134
gi|15827688|ref|NP_301951.1| proteasome [alpha]-type subunit 1 [... 450 1e-124
gi|467020|gb|AAA17205.1| B2126_C3_260 [Mycobacterium leprae] 446 2e-123
gi|240171536|ref|ZP_04750195.1| proteasome, alpha subunit [Mycob... 439 2e-121
gi|118617840|ref|YP_906172.1| proteasome (alpha subunit) PrcA [M... 429 2e-118
gi|296165181|ref|ZP_06847728.1| proteasome [Mycobacterium parasc... 428 5e-118
gi|183983083|ref|YP_001851374.1| proteasome (alpha subunit) PrcA... 427 8e-118
gi|41407932|ref|NP_960768.1| PrcA [Mycobacterium avium subsp. pa... 418 4e-115
gi|254819641|ref|ZP_05224642.1| peptidase, T1 family protein [My... 417 9e-115
gi|336461986|gb|EGO40835.1| proteasome, alpha subunit, bacterial... 416 1e-114
gi|342859802|ref|ZP_08716455.1| proteasome subunit alpha [Mycoba... 410 6e-113
gi|118468612|ref|YP_888184.1| proteasome subunit alpha [Mycobact... 403 1e-110
gi|120404420|ref|YP_954249.1| 20S proteasome, A and B subunits [... 401 4e-110
gi|294993517|ref|ZP_06799208.1| 20S proteasome, A and B subunits... 392 2e-107
gi|108800095|ref|YP_640292.1| 20S proteasome, A and B subunits [... 389 2e-106
gi|145223665|ref|YP_001134343.1| 20S proteasome, A and B subunit... 389 3e-106
gi|333990436|ref|YP_004523050.1| proteasome (alpha subunit) PrcA... 382 3e-104
gi|169629259|ref|YP_001702908.1| proteasome (subunit alpha) PrcA... 353 1e-95
gi|111017862|ref|YP_700834.1| proteasome alpha subunit [Rhodococ... 327 1e-87
gi|75491638|sp|Q53084.1|PSA2_RHOER RecName: Full=Proteasome subu... 324 9e-87
gi|226306660|ref|YP_002766620.1| 20S proteasome alpha-type subun... 324 9e-87
gi|75491634|sp|Q53080.1|PSA1_RHOER RecName: Full=Proteasome subu... 323 2e-86
gi|229493669|ref|ZP_04387454.1| proteasome, alpha subunit [Rhodo... 322 2e-86
gi|226359995|ref|YP_002777773.1| 20S proteasome alpha-type subun... 322 3e-86
gi|325676827|ref|ZP_08156500.1| proteasome, alpha subunit [Rhodo... 316 2e-84
gi|312139723|ref|YP_004007059.1| 20S proteasome alpha subunit pr... 316 2e-84
gi|40889398|pdb|1Q5R|A Chain A, The Rhodococcus 20s Proteasome W... 315 3e-84
gi|343927936|ref|ZP_08767402.1| 20S proteasome alpha-type subuni... 301 8e-80
gi|333919678|ref|YP_004493259.1| proteasome [Amycolicicoccus sub... 300 1e-79
gi|134098821|ref|YP_001104482.1| 20S proteasome alpha-subunit [S... 299 2e-79
gi|54025140|ref|YP_119382.1| putative proteasome subunit alpha [... 294 9e-78
gi|257056205|ref|YP_003134037.1| 20S proteasome subunit (alpha o... 283 1e-74
gi|331697107|ref|YP_004333346.1| proteasome subunit alpha [Pseud... 282 4e-74
gi|256376368|ref|YP_003100028.1| 20S proteasome subunits A and B... 275 3e-72
gi|330468522|ref|YP_004406265.1| proteasome subunit alpha [Verru... 273 1e-71
gi|159037958|ref|YP_001537211.1| 20S proteasome subunits A and B... 271 5e-71
gi|145594776|ref|YP_001159073.1| 20S proteasome subunits A and B... 271 9e-71
gi|336178170|ref|YP_004583545.1| proteasome subunit alpha [Frank... 268 5e-70
gi|288917498|ref|ZP_06411863.1| 20S proteasome A and B subunits ... 268 8e-70
gi|302425216|sp|A8LH53.2|PSA_FRASN RecName: Full=Proteasome subu... 267 8e-70
gi|302527207|ref|ZP_07279549.1| 20S proteasome alpha-subunit [St... 267 1e-69
gi|158316641|ref|YP_001509149.1| 20S proteasome subunits A and B... 266 2e-69
gi|72162190|ref|YP_289847.1| 20S proteasome alpha-subunit [Therm... 265 5e-69
gi|312197565|ref|YP_004017626.1| 20S proteasome A and B subunits... 263 1e-68
>gi|90109389|pdb|2FHH|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109391|pdb|2FHH|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109393|pdb|2FHH|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
11 more sequence titles
gi|90109395|pdb|2FHH|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109397|pdb|2FHH|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109399|pdb|2FHH|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109401|pdb|2FHH|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109403|pdb|2FHH|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109405|pdb|2FHH|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109407|pdb|2FHH|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109409|pdb|2FHH|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109411|pdb|2FHH|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109413|pdb|2FHH|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
gi|90109415|pdb|2FHH|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With A Peptidyl Boronate Inhibitor Mln-273
Length=251
Score = 499 bits (1285), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 2 SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG 61
SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG
Sbjct 5 SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG 64
Query 62 FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE 121
FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE
Sbjct 65 FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE 124
Query 122 LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL 181
LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL
Sbjct 125 LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL 184
Query 182 RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ 241
RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ
Sbjct 185 RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ 244
Query 242 SDGESSG 248
SDGESSG
Sbjct 245 SDGESSG 251
>gi|15609246|ref|NP_216625.1| proteasome (alpha subunit) PrcA [Mycobacterium tuberculosis H37Rv]
gi|148661924|ref|YP_001283447.1| proteasome subunit alpha [Mycobacterium tuberculosis H37Ra]
gi|148823320|ref|YP_001288074.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis F11]
115 more sequence titles
gi|167967480|ref|ZP_02549757.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis H37Ra]
gi|253798829|ref|YP_003031830.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis KZN
1435]
gi|254551141|ref|ZP_05141588.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289554105|ref|ZP_06443315.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis KZN
605]
gi|289762271|ref|ZP_06521649.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis GM
1503]
gi|297634693|ref|ZP_06952473.1| 20S proteasome, A and B subunits [Mycobacterium tuberculosis
KZN 4207]
gi|297731681|ref|ZP_06960799.1| 20S proteasome, A and B subunits [Mycobacterium tuberculosis
KZN R506]
gi|306776356|ref|ZP_07414693.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu001]
gi|306780136|ref|ZP_07418473.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu002]
gi|306784879|ref|ZP_07423201.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu003]
gi|306789246|ref|ZP_07427568.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu004]
gi|306793575|ref|ZP_07431877.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu005]
gi|306797964|ref|ZP_07436266.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu006]
gi|306803843|ref|ZP_07440511.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu008]
gi|306808416|ref|ZP_07445084.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu007]
gi|306968239|ref|ZP_07480900.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu009]
gi|306972466|ref|ZP_07485127.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu010]
gi|307080177|ref|ZP_07489347.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu011]
gi|307084757|ref|ZP_07493870.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu012]
gi|313659016|ref|ZP_07815896.1| proteasome subunit alpha [Mycobacterium tuberculosis KZN V2475]
gi|81669081|sp|O33244.1|PSA_MYCTU RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|302425199|sp|A5U4D5.1|PSA_MYCTA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|302425200|sp|A5WP83.1|PSA_MYCTF RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|302425201|sp|C6DPV2.1|PSA_MYCTK RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|258588385|pdb|3H6F|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588386|pdb|3H6F|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588388|pdb|3H6F|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588390|pdb|3H6F|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588393|pdb|3H6F|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588395|pdb|3H6F|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588397|pdb|3H6F|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588399|pdb|3H6F|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588401|pdb|3H6F|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588403|pdb|3H6F|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588405|pdb|3H6F|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588407|pdb|3H6F|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588409|pdb|3H6F|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588411|pdb|3H6F|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Ht1171
gi|258588413|pdb|3H6I|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588414|pdb|3H6I|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588416|pdb|3H6I|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588418|pdb|3H6I|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588421|pdb|3H6I|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588423|pdb|3H6I|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588425|pdb|3H6I|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588427|pdb|3H6I|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588429|pdb|3H6I|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588431|pdb|3H6I|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588433|pdb|3H6I|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588435|pdb|3H6I|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588437|pdb|3H6I|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|258588439|pdb|3H6I|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Modified By Inhibitor Gl1
gi|296863653|pdb|3MKA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863654|pdb|3MKA|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863656|pdb|3MKA|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863658|pdb|3MKA|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863661|pdb|3MKA|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863663|pdb|3MKA|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863665|pdb|3MKA|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863667|pdb|3MKA|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863669|pdb|3MKA|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863671|pdb|3MKA|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863673|pdb|3MKA|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863675|pdb|3MKA|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863677|pdb|3MKA|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863679|pdb|3MKA|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|299689208|pdb|3MI0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689209|pdb|3MI0|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689211|pdb|3MI0|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689213|pdb|3MI0|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689216|pdb|3MI0|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689218|pdb|3MI0|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689220|pdb|3MI0|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689222|pdb|3MI0|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689224|pdb|3MI0|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689226|pdb|3MI0|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689228|pdb|3MI0|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689230|pdb|3MI0|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689232|pdb|3MI0|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|299689234|pdb|3MI0|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
At 2.2 A
gi|307776448|pdb|3KRD|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776449|pdb|3KRD|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776451|pdb|3KRD|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776453|pdb|3KRD|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776456|pdb|3KRD|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776458|pdb|3KRD|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776460|pdb|3KRD|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776462|pdb|3KRD|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776464|pdb|3KRD|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776466|pdb|3KRD|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776468|pdb|3KRD|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776470|pdb|3KRD|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776472|pdb|3KRD|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|307776474|pdb|3KRD|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
In Complex With Fellutamide B
gi|2253049|emb|CAB10713.1| proteasome (alpha subunit) PrcA [Mycobacterium tuberculosis H37Rv]
gi|148506076|gb|ABQ73885.1| proteasome subunit alpha [Mycobacterium tuberculosis H37Ra]
gi|148721847|gb|ABR06472.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis F11]
gi|148832233|gb|ABR14061.1| PrcA [Mycobacterium tuberculosis H37Ra]
gi|253320332|gb|ACT24935.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis KZN
1435]
gi|289438737|gb|EFD21230.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis KZN
605]
gi|289709777|gb|EFD73793.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis GM
1503]
gi|308215202|gb|EFO74601.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu001]
gi|308326963|gb|EFP15814.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu002]
gi|308330396|gb|EFP19247.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu003]
gi|308334231|gb|EFP23082.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu004]
gi|308338031|gb|EFP26882.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu005]
gi|308341717|gb|EFP30568.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu006]
gi|308345207|gb|EFP34058.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu007]
gi|308349510|gb|EFP38361.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu008]
gi|308354140|gb|EFP42991.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu009]
gi|308358078|gb|EFP46929.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu010]
gi|308362012|gb|EFP50863.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu011]
gi|308365660|gb|EFP54511.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis SUMu012]
gi|328458590|gb|AEB04013.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis KZN
4207]
gi|344219932|gb|AEN00563.1| proteasome (alpha subunit) PrcA [Mycobacterium tuberculosis CTRI-2]
Length=248
Score = 499 bits (1284), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 247/248 (99%), Positives = 248/248 (100%), Gaps = 0/248 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
Query 241 QSDGESSG 248
QSDGESSG
Sbjct 241 QSDGESSG 248
>gi|90109361|pdb|2FHG|A Chain A, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109363|pdb|2FHG|B Chain B, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109365|pdb|2FHG|D Chain D, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
11 more sequence titles
gi|90109367|pdb|2FHG|F Chain F, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109369|pdb|2FHG|I Chain I, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109371|pdb|2FHG|K Chain K, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109373|pdb|2FHG|M Chain M, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109375|pdb|2FHG|O Chain O, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109377|pdb|2FHG|Q Chain Q, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109379|pdb|2FHG|S Chain S, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109381|pdb|2FHG|U Chain U, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109383|pdb|2FHG|W Chain W, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109385|pdb|2FHG|Y Chain Y, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
gi|90109387|pdb|2FHG|1 Chain 1, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
Length=250
Score = 499 bits (1284), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 2 SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG 61
SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG
Sbjct 4 SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG 63
Query 62 FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE 121
FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE
Sbjct 64 FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE 123
Query 122 LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL 181
LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL
Sbjct 124 LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL 183
Query 182 RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ 241
RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ
Sbjct 184 RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ 243
Query 242 SDGESSG 248
SDGESSG
Sbjct 244 SDGESSG 250
>gi|254364916|ref|ZP_04980962.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis str.
Haarlem]
gi|134150430|gb|EBA42475.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis str.
Haarlem]
Length=248
Score = 497 bits (1280), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 246/248 (99%), Positives = 247/248 (99%), Gaps = 0/248 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKTPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
Query 241 QSDGESSG 248
QSDGESSG
Sbjct 241 QSDGESSG 248
>gi|15841601|ref|NP_336638.1| proteasome, alpha subunit [Mycobacterium tuberculosis CDC1551]
gi|254232269|ref|ZP_04925596.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis C]
gi|13881851|gb|AAK46452.1| proteasome, alpha subunit [Mycobacterium tuberculosis CDC1551]
gi|124601328|gb|EAY60338.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis C]
gi|323719322|gb|EGB28463.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis CDC1551A]
Length=248
Score = 496 bits (1277), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 246/248 (99%), Positives = 247/248 (99%), Gaps = 0/248 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
Query 241 QSDGESSG 248
QSDGESSG
Sbjct 241 QSDGESSG 248
>gi|31793289|ref|NP_855782.1| proteasome (alpha subunit) PrcA [Mycobacterium bovis AF2122/97]
gi|121637991|ref|YP_978215.1| proteasome subunit alpha PrcA [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990485|ref|YP_002645172.1| proteasome subunit alpha [Mycobacterium bovis BCG str. Tokyo
172]
30 more sequence titles
Length=248
Score = 493 bits (1268), Expect = 1e-137, Method: Compositional matrix adjust.
Identities = 245/248 (99%), Positives = 246/248 (99%), Gaps = 0/248 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
L IAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct 181 LGIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
Query 241 QSDGESSG 248
QSDGESSG
Sbjct 241 QSDGESSG 248
>gi|258588450|pdb|3HF9|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588451|pdb|3HF9|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588452|pdb|3HF9|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
53 more sequence titles
gi|258588453|pdb|3HF9|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588454|pdb|3HF9|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588455|pdb|3HF9|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588456|pdb|3HF9|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588457|pdb|3HF9|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588458|pdb|3HF9|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588459|pdb|3HF9|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588460|pdb|3HF9|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588461|pdb|3HF9|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588462|pdb|3HF9|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588463|pdb|3HF9|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588464|pdb|3HF9|AA Chain a, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588465|pdb|3HF9|BB Chain b, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588466|pdb|3HF9|DD Chain d, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588467|pdb|3HF9|FF Chain f, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588468|pdb|3HF9|II Chain i, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588469|pdb|3HF9|KK Chain k, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588470|pdb|3HF9|MM Chain m, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588471|pdb|3HF9|OO Chain o, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588472|pdb|3HF9|QQ Chain q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588473|pdb|3HF9|SS Chain s, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588474|pdb|3HF9|UU Chain u, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588475|pdb|3HF9|WW Chain w, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588476|pdb|3HF9|YY Chain y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588477|pdb|3HF9|3 Chain 3, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588520|pdb|3HFA|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588521|pdb|3HFA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588522|pdb|3HFA|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588523|pdb|3HFA|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588524|pdb|3HFA|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588525|pdb|3HFA|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588526|pdb|3HFA|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588527|pdb|3HFA|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588528|pdb|3HFA|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588529|pdb|3HFA|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588530|pdb|3HFA|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588531|pdb|3HFA|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588532|pdb|3HFA|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|258588533|pdb|3HFA|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant
gi|299689178|pdb|3MFE|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689179|pdb|3MFE|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689180|pdb|3MFE|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689181|pdb|3MFE|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689182|pdb|3MFE|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689183|pdb|3MFE|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689184|pdb|3MFE|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689185|pdb|3MFE|O Chain O, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689186|pdb|3MFE|Q Chain Q, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689187|pdb|3MFE|S Chain S, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689188|pdb|3MFE|U Chain U, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689189|pdb|3MFE|W Chain W, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689190|pdb|3MFE|Y Chain Y, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
gi|299689191|pdb|3MFE|1 Chain 1, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
Open-Gate Mutant With H0 Movement
Length=240
Score = 480 bits (1236), Expect = 6e-134, Method: Compositional matrix adjust.
Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%)
Query 10 EQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGKFN 69
EQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGKFN
Sbjct 2 EQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGKFN 61
Query 70 EFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEVAH 129
EFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEVAH
Sbjct 62 EFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEVAH 121
Query 130 YGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAALR 189
YGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAALR
Sbjct 122 YGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAALR 181
Query 190 AGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQSDGESSG 248
AGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQSDGESSG
Sbjct 182 AGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQSDGESSG 240
>gi|15827688|ref|NP_301951.1| proteasome [alpha]-type subunit 1 [Mycobacterium leprae TN]
gi|221230165|ref|YP_002503581.1| proteasome alpha-type subunit 1 [Mycobacterium leprae Br4923]
gi|81552795|sp|Q9S375.1|PSA_MYCLE RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|302425195|sp|B8ZRF4.1|PSA_MYCLB RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|4200275|emb|CAA22934.1| putative proteasome alpha-type subunit 1 [Mycobacterium leprae]
gi|13093239|emb|CAC31704.1| proteasome [alpha]-type subunit 1 [Mycobacterium leprae]
gi|219933272|emb|CAR71418.1| proteasome [alpha]-type subunit 1 [Mycobacterium leprae Br4923]
Length=265
Score = 450 bits (1157), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 223/244 (92%), Positives = 231/244 (95%), Gaps = 0/244 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR +SVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGRSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSI DEPHF+VMGGTTE IANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSINDEPHFMVMGGTTESIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
L IAVAALRAGSAD +G DQPTLGVASLEVAVLDANRPRRAFRRI GS L+ALL +++S
Sbjct 181 LGIAVAALRAGSADAAGSDQPTLGVASLEVAVLDANRPRRAFRRIIGSGLEALLREKDSK 240
Query 241 QSDG 244
S G
Sbjct 241 GSKG 244
>gi|467020|gb|AAA17205.1| B2126_C3_260 [Mycobacterium leprae]
Length=265
Score = 446 bits (1147), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 221/244 (91%), Positives = 230/244 (95%), Gaps = 0/244 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRE+ ELARKGIAR +SVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMREQRELARKGIARGRSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSI DEPHF+VMGGTTE IANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSINDEPHFMVMGGTTESIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
L IAVAALRAGSAD +G DQPTLGVASLEVAVLDANRPRRAFRRI GS L+ALL +++S
Sbjct 181 LGIAVAALRAGSADAAGSDQPTLGVASLEVAVLDANRPRRAFRRIIGSGLEALLREKDSK 240
Query 241 QSDG 244
S G
Sbjct 241 GSKG 244
>gi|240171536|ref|ZP_04750195.1| proteasome, alpha subunit [Mycobacterium kansasii ATCC 12478]
Length=268
Score = 439 bits (1130), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 216/234 (93%), Positives = 222/234 (95%), Gaps = 0/234 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVALAY+GGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALAYSGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIA ALKESYAENA L DA
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIATALKESYAENADLPDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
LRIAV ALRA SADTSG QP LGVA+LEVA+LDANRPRRAFRRITG+ L+ LL
Sbjct 181 LRIAVEALRASSADTSGNGQPALGVANLEVAILDANRPRRAFRRITGAQLETLL 234
>gi|118617840|ref|YP_906172.1| proteasome (alpha subunit) PrcA [Mycobacterium ulcerans Agy99]
gi|302425202|sp|A0PQT2.1|PSA_MYCUA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|118569950|gb|ABL04701.1| proteasome (alpha subunit) PrcA [Mycobacterium ulcerans Agy99]
Length=267
Score = 429 bits (1103), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 209/239 (88%), Positives = 220/239 (93%), Gaps = 0/239 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVALA+AGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALAFAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI ALK +Y ENA L DA
Sbjct 121 ELCVAEVAHYGETKAPELYRITYDGSIADEPHFVVMGGTTEPITTALKNTYTENADLPDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES 239
L IAV ALRAGSA+ S DQP LGVASLE A+LDAN+PRRAFRR+T S L+ LL +++S
Sbjct 181 LDIAVEALRAGSAENSSNDQPVLGVASLEAAILDANKPRRAFRRLTRSTLETLLQERDS 239
>gi|296165181|ref|ZP_06847728.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899370|gb|EFG78829.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=257
Score = 428 bits (1100), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 215/257 (84%), Positives = 227/257 (89%), Gaps = 9/257 (3%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI ALKESYAENA L +A
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKESYAENADLREA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES- 239
+IAV ALRAGSAD SGGDQP+ V SLEVA+LD NRPRRAFRRI + L+ LL + +S
Sbjct 181 TQIAVKALRAGSADGSGGDQPSPDVGSLEVAILDVNRPRRAFRRINRATLENLLHEGDSQ 240
Query 240 --------PQSDGESSG 248
P+S+G+S G
Sbjct 241 QPETNGDGPESNGDSVG 257
>gi|183983083|ref|YP_001851374.1| proteasome (alpha subunit) PrcA [Mycobacterium marinum M]
gi|302425196|sp|B2HFV5.1|PSA_MYCMM RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|183176409|gb|ACC41519.1| proteasome (alpha subunit) PrcA [Mycobacterium marinum M]
Length=267
Score = 427 bits (1097), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 208/239 (88%), Positives = 220/239 (93%), Gaps = 0/239 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVALA+AGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALAFAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGE+K PELYRITYDGSIADEPHFVVMGGTTEPI ALK +Y ENA L DA
Sbjct 121 ELCVAEVAHYGESKAPELYRITYDGSIADEPHFVVMGGTTEPITTALKNTYTENADLPDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES 239
L IAV ALRAGSA+ S DQP LGVASLE A+LDAN+PRRAFRR+T S L+ LL +++S
Sbjct 181 LGIAVEALRAGSAENSSNDQPVLGVASLEAAILDANKPRRAFRRLTRSTLETLLQERDS 239
>gi|41407932|ref|NP_960768.1| PrcA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118466837|ref|YP_881604.1| peptidase, T1 family protein [Mycobacterium avium 104]
gi|254775074|ref|ZP_05216590.1| peptidase, T1 family protein [Mycobacterium avium subsp. avium
ATCC 25291]
gi|81571312|sp|Q73YW9.1|PSA_MYCPA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|302425190|sp|A0QFB6.1|PSA_MYCA1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|41396286|gb|AAS04151.1| PrcA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118168124|gb|ABK69021.1| peptidase, T1 family protein [Mycobacterium avium 104]
Length=256
Score = 418 bits (1074), Expect = 4e-115, Method: Compositional matrix adjust.
Identities = 210/244 (87%), Positives = 220/244 (91%), Gaps = 1/244 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI ALK+SYAENA+L +A
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENANLREA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
RIAV ALRAGS ++S GDQ L V SLEVA+LD NRPRRAFRRI L+ LL + +S
Sbjct 181 TRIAVRALRAGS-ESSNGDQSALDVGSLEVAILDVNRPRRAFRRINRPTLENLLRELDSN 239
Query 241 QSDG 244
SDG
Sbjct 240 GSDG 243
>gi|254819641|ref|ZP_05224642.1| peptidase, T1 family protein [Mycobacterium intracellulare ATCC
13950]
Length=261
Score = 417 bits (1071), Expect = 9e-115, Method: Compositional matrix adjust.
Identities = 207/234 (89%), Positives = 217/234 (93%), Gaps = 1/234 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGE+K PELYRITYDGSIADEPHFVVMGGTTEPI ALK+SYAENA+L +A
Sbjct 121 ELCVAEVAHYGESKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENANLREA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
RIAV ALRAGS ++S GDQ TL VASLEVA+LD NRPRRAFRRI + L+ LL
Sbjct 181 TRIAVKALRAGS-ESSNGDQSTLDVASLEVAILDVNRPRRAFRRINRATLENLL 233
>gi|336461986|gb|EGO40835.1| proteasome, alpha subunit, bacterial type [Mycobacterium avium
subsp. paratuberculosis S397]
Length=256
Score = 416 bits (1070), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 209/244 (86%), Positives = 219/244 (90%), Gaps = 1/244 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGR LANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRHLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI ALK+SYAENA+L +A
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENANLREA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
RIAV ALRAGS ++S GDQ L V SLEVA+LD NRPRRAFRRI L+ LL + +S
Sbjct 181 TRIAVRALRAGS-ESSNGDQSALDVGSLEVAILDVNRPRRAFRRINRPTLENLLRELDSN 239
Query 241 QSDG 244
SDG
Sbjct 240 GSDG 243
>gi|342859802|ref|ZP_08716455.1| proteasome subunit alpha [Mycobacterium colombiense CECT 3035]
gi|342132934|gb|EGT86154.1| proteasome subunit alpha [Mycobacterium colombiense CECT 3035]
Length=254
Score = 410 bits (1055), Expect = 6e-113, Method: Compositional matrix adjust.
Identities = 213/256 (84%), Positives = 220/256 (86%), Gaps = 12/256 (4%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI ALK+SYAENA L A
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENADLRQA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLV----- 235
RIAV ALRAGS ++S GD L V SLEVA+LD NRPRRAFRRI + L+ LL
Sbjct 181 TRIAVKALRAGS-ESSNGD--ALDVGSLEVAILDVNRPRRAFRRINRATLENLLRELDSD 237
Query 236 ----DQESPQSDGESS 247
D E SDGESS
Sbjct 238 GSGGDGEPADSDGESS 253
>gi|118468612|ref|YP_888184.1| proteasome subunit alpha [Mycobacterium smegmatis str. MC2 155]
gi|259534758|sp|A0QZ46.1|PSA_MYCS2 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|2293464|gb|AAC45615.1| proteasome alpha subunit [Mycobacterium smegmatis str. MC2 155]
gi|118169899|gb|ABK70795.1| proteasome alpha subunit [Mycobacterium smegmatis str. MC2 155]
Length=246
Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 201/245 (83%), Positives = 216/245 (89%), Gaps = 3/245 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR +SVVALAY+ GVLFVAENPSRSLQK+SELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGRSVVALAYSEGVLFVAENPSRSLQKVSELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+FNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAVGRFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI AL ESY ENASL DA
Sbjct 121 ELCVAEVAHYGETKAPELYRITYDGSIADEPHFVVMGGTTEPIIAALNESYTENASLQDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+ IAV AL SA G + +LG ++LEVA+LDA RPRRAFRRITG+AL+ALL +Q
Sbjct 181 VEIAVKAL---SASAEGAEPRSLGPSTLEVAILDAGRPRRAFRRITGAALEALLPEQPQQ 237
Query 241 QSDGE 245
G+
Sbjct 238 ADSGD 242
>gi|120404420|ref|YP_954249.1| 20S proteasome, A and B subunits [Mycobacterium vanbaalenii PYR-1]
gi|302425203|sp|A1TAP3.1|PSA_MYCVP RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|119957238|gb|ABM14243.1| 20S proteasome, A and B subunits [Mycobacterium vanbaalenii PYR-1]
Length=254
Score = 401 bits (1031), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 199/246 (81%), Positives = 219/246 (90%), Gaps = 3/246 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR +SV+ALAYA GVLFVAENPSRSLQK+SELYDR+
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGRSVIALAYADGVLFVAENPSRSLQKVSELYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+FNEF+NLR GGI+FADT+GYAY RRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAVGRFNEFNNLRSGGIRFADTQGYAYSRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAH+GETK PELYRITYDGSIADEPHFVVMGGTTEPI+ AL ESY EN SL DA
Sbjct 121 ELCVAEVAHHGETKAPELYRITYDGSIADEPHFVVMGGTTEPISTALNESYKENLSLADA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+ IAV AL AG +G + TLG A+LEVAVLDANRPRRAFRRITGSAL+ALL + +S
Sbjct 181 VSIAVKALGAG---VNGAEPRTLGPATLEVAVLDANRPRRAFRRITGSALEALLPEVDSS 237
Query 241 QSDGES 246
+S E+
Sbjct 238 ESSNEA 243
>gi|294993517|ref|ZP_06799208.1| 20S proteasome, A and B subunits [Mycobacterium tuberculosis
210]
Length=198
Score = 392 bits (1008), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 194/198 (98%), Positives = 195/198 (99%), Gaps = 0/198 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct 121 ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
Query 181 LRIAVAALRAGSADTSGG 198
L AVAALRAGSADTSGG
Sbjct 181 LGFAVAALRAGSADTSGG 198
>gi|108800095|ref|YP_640292.1| 20S proteasome, A and B subunits [Mycobacterium sp. MCS]
gi|119869222|ref|YP_939174.1| 20S proteasome, A and B subunits [Mycobacterium sp. KMS]
gi|126435719|ref|YP_001071410.1| 20S proteasome, A and B subunits [Mycobacterium sp. JLS]
6 more sequence titles
Length=250
Score = 389 bits (1000), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 192/234 (83%), Positives = 211/234 (91%), Gaps = 3/234 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR +SVVALAYA GVLFVAENPSRSLQK+SELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGRSVVALAYADGVLFVAENPSRSLQKVSELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+FNEF+NLR GGI+FADT+GYAY RRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAVGRFNEFNNLRSGGIRFADTQGYAYSRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAH+GE+K PELYRITYDGSIADEPHFVVMGG TEPI L +SY ENA L DA
Sbjct 121 ELCVAEVAHFGESKAPELYRITYDGSIADEPHFVVMGGATEPIIAKLNDSYTENAELADA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+RIAV AL +G +G ++ TLG ++LEVA+LDANRPRRAFRRITGSAL+ALL
Sbjct 181 VRIAVDALESGG---NGAERRTLGPSTLEVAILDANRPRRAFRRITGSALEALL 231
>gi|145223665|ref|YP_001134343.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
gi|315443991|ref|YP_004076870.1| 20S proteasome subunit (alpha or beta) [Mycobacterium sp. Spyr1]
gi|302425194|sp|A4TB55.1|PSA_MYCGI RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|145216151|gb|ABP45555.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
gi|315262294|gb|ADT99035.1| 20S proteasome subunit (alpha or beta) [Mycobacterium sp. Spyr1]
Length=251
Score = 389 bits (998), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 201/248 (82%), Positives = 220/248 (89%), Gaps = 3/248 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRERSELARKGIAR +SV+ALAYA GVLFVAENPSRSLQK+SELYDRV
Sbjct 1 MSFPYFISPEQAMRERSELARKGIARGRSVIALAYADGVLFVAENPSRSLQKVSELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+FNEF+NLR GGI+FADT+GYAY RRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAVGRFNEFNNLRSGGIRFADTQGYAYSRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIA AL ESYAENASL DA
Sbjct 121 ELCVAEVAHYGETKAPELYRITYDGSIADEPHFVVMGGTTEPIATALNESYAENASLEDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+RIAVAAL A +G + TLG ++LEVA+LDANRPRRAFRRITG+AL+ALL ++
Sbjct 181 VRIAVAAL---GAGGNGAEPRTLGPSTLEVAILDANRPRRAFRRITGAALEALLPQADTK 237
Query 241 QSDGESSG 248
+S G
Sbjct 238 DDSQDSEG 245
>gi|333990436|ref|YP_004523050.1| proteasome (alpha subunit) PrcA [Mycobacterium sp. JDM601]
gi|333486404|gb|AEF35796.1| proteasome (alpha subunit) PrcA [Mycobacterium sp. JDM601]
Length=248
Score = 382 bits (980), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 196/251 (79%), Positives = 213/251 (85%), Gaps = 10/251 (3%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+SFPYFISPEQAMRER ELARKGIAR + V+ALAYA GVLFVAENPSRSLQKISELYDRV
Sbjct 1 MSFPYFISPEQAMRERGELARKGIARGRGVIALAYADGVLFVAENPSRSLQKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAAAG+ NEF+NLRRGGIQFADTRGYAYDRRDVT RQLANVYAQTLGTIFTEQAKPYEV
Sbjct 61 GFAAAGRINEFENLRRGGIQFADTRGYAYDRRDVTARQLANVYAQTLGTIFTEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVA VA+ G+TK PELYRITYDGSI DEPHFVVMGGTTEP+ ALKESY ENA L DA
Sbjct 121 ELCVAGVAYQGQTKAPELYRITYDGSITDEPHFVVMGGTTEPVIAALKESYTENAELADA 180
Query 181 LRIAVAALRAGSADT-SGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES 239
L IAV AL+ DT +G +Q LG +LEVA+LDANRP+RAFRRI S L+ LL
Sbjct 181 LHIAVNALK--QTDTGNGAEQRELGPGTLEVAILDANRPKRAFRRIARSTLEELL----- 233
Query 240 PQSD--GESSG 248
PQ+D GE+SG
Sbjct 234 PQADSSGENSG 244
>gi|169629259|ref|YP_001702908.1| proteasome (subunit alpha) PrcA [Mycobacterium abscessus ATCC
19977]
gi|302425191|sp|B1MAI3.1|PSA_MYCA9 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|169241226|emb|CAM62254.1| Proteasome (alpha subunit) PrcA [Mycobacterium abscessus]
Length=260
Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/245 (72%), Positives = 204/245 (84%), Gaps = 3/245 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++FPY+ S EQ MR+RSELARKGI+R +SVVAL Y GVLFVAENPS SLQK+SE+YDRV
Sbjct 1 MTFPYYASVEQLMRDRSELARKGISRGRSVVALTYTDGVLFVAENPSNSLQKVSEVYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GKFNEFD LRRGGIQ+AD RGYAYDRRDV+GRQLAN+YA+ LGTIF EQAKPYEV
Sbjct 61 GFAAVGKFNEFDRLRRGGIQWADMRGYAYDRRDVSGRQLANIYAEALGTIFNEQAKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCV EVAHYG P LYRITYDGSIADEPH+VVMGG TEP+ N+LKESY E+++L DA
Sbjct 121 ELCVGEVAHYGRDTEPVLYRITYDGSIADEPHWVVMGGNTEPVINSLKESYVEDSALKDA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+ AV AL+AG+A +G + LG LEVAVL+ +RPRRAFRRI G+AL+ALL + SP
Sbjct 181 VGFAVKALQAGTAGANGSEGRALG--GLEVAVLEQSRPRRAFRRIKGAALEALLPEDFSP 238
Query 241 -QSDG 244
Q++G
Sbjct 239 GQTEG 243
>gi|111017862|ref|YP_700834.1| proteasome alpha subunit [Rhodococcus jostii RHA1]
gi|123341024|sp|Q0SIG0.1|PSA_RHOSR RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|110817392|gb|ABG92676.1| proteasome alpha subunit [Rhodococcus jostii RHA1]
Length=259
Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/243 (68%), Positives = 191/243 (79%), Gaps = 2/243 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SVV L + GVLFVAENPS +L K+SELYDR+
Sbjct 1 MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV G K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY + L A
Sbjct 121 EICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+ IAV ALR G A G++ + VASLEVAVLD +RPRRAFRRITG AL+ L+ + +P
Sbjct 181 VGIAVNALRQGGAGE--GEKRNVDVASLEVAVLDQSRPRRAFRRITGPALEQLIPAEPAP 238
Query 241 QSD 243
S+
Sbjct 239 ASE 241
>gi|75491638|sp|Q53084.1|PSA2_RHOER RecName: Full=Proteasome subunit alpha 2; AltName: Full=20S proteasome
alpha subunit 2; AltName: Full=Proteasome core protein
PrcA 2
gi|847775|gb|AAC45737.1| proteasome alpha-type subunit 2 [Rhodococcus erythropolis]
Length=255
Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/253 (64%), Positives = 198/253 (79%), Gaps = 7/253 (2%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SVV L Y GVLFVAENPSR+L K+SELYDR+
Sbjct 1 MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAE+ +G + +LYRITYDGSIADE FVVMGGTTEPI A++ESY + L A
Sbjct 121 EICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESA 180
Query 181 LRIAVAALRAGS---ADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL--- 234
+R+AV AL+ G A T+ + TL V++LEVAVLD+NRPRRAF+RI GS+L+ +L
Sbjct 181 VRLAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGSSLEEMLPTP 240
Query 235 -VDQESPQSDGES 246
+++P ++G++
Sbjct 241 AATEDAPPANGDA 253
>gi|226306660|ref|YP_002766620.1| 20S proteasome alpha-type subunit [Rhodococcus erythropolis PR4]
gi|302425252|sp|C0ZZU6.1|PSA_RHOE4 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|226185777|dbj|BAH33881.1| 20S proteasome alpha-type subunit [Rhodococcus erythropolis PR4]
Length=254
Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/237 (68%), Positives = 189/237 (80%), Gaps = 3/237 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SVV L Y GVLFVAENPSR+L K+SELYDR+
Sbjct 1 MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAE+ +G + +LYRITYDGSIADE FVVMGGTTEPI A++ESY + L A
Sbjct 121 EICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESA 180
Query 181 LRIAVAALRAGS---ADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+R+AV AL+ G A T+ + TL V++LEVAVLD+NRPRRAF+RI GSAL+ +L
Sbjct 181 VRLAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGSALEEML 237
>gi|75491634|sp|Q53080.1|PSA1_RHOER RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S proteasome
alpha subunit 1; AltName: Full=Proteasome core protein
PrcA 1
gi|40889384|pdb|1Q5Q|A Chain A, The Rhodococcus 20s Proteasome
gi|40889385|pdb|1Q5Q|B Chain B, The Rhodococcus 20s Proteasome
13 more sequence titles
gi|40889386|pdb|1Q5Q|C Chain C, The Rhodococcus 20s Proteasome
gi|40889387|pdb|1Q5Q|D Chain D, The Rhodococcus 20s Proteasome
gi|40889388|pdb|1Q5Q|E Chain E, The Rhodococcus 20s Proteasome
gi|40889389|pdb|1Q5Q|F Chain F, The Rhodococcus 20s Proteasome
gi|40889390|pdb|1Q5Q|G Chain G, The Rhodococcus 20s Proteasome
gi|112491159|pdb|2H6J|A Chain A, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491160|pdb|2H6J|B Chain B, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491161|pdb|2H6J|C Chain C, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491162|pdb|2H6J|D Chain D, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491163|pdb|2H6J|E Chain E, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491164|pdb|2H6J|F Chain F, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491165|pdb|2H6J|G Chain G, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|847770|gb|AAC45741.1| proteasome alpha-type subunit 1 [Rhodococcus erythropolis]
Length=259
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/234 (69%), Positives = 186/234 (80%), Gaps = 2/234 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SVV L + GVLFVAENPS +L K+SELYDR+
Sbjct 1 MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV G K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY + L A
Sbjct 121 EICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+ IAV ALR G A G++ + VASLEVAVLD +RPRRAFRRI G+AL+ L+
Sbjct 181 VGIAVNALRQGGA--GEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLV 232
>gi|229493669|ref|ZP_04387454.1| proteasome, alpha subunit [Rhodococcus erythropolis SK121]
gi|229319630|gb|EEN85466.1| proteasome, alpha subunit [Rhodococcus erythropolis SK121]
Length=255
Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/253 (64%), Positives = 197/253 (78%), Gaps = 7/253 (2%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SVV L Y GVLFVAENPSR+L K+SELYDR+
Sbjct 1 MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAE+ +G + +LYRITYDGSIADE FVVMGGTTEPI A++ESY + L A
Sbjct 121 EICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESA 180
Query 181 LRIAVAALRAG---SADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL--- 234
+RIAV AL+ G A T+ + TL V++LEVAVLD+NRPRRAF+RI G+ L+ +L
Sbjct 181 VRIAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGTVLEEMLPAP 240
Query 235 -VDQESPQSDGES 246
+++P ++G++
Sbjct 241 AAVEDAPPANGDA 253
>gi|226359995|ref|YP_002777773.1| 20S proteasome alpha-type subunit [Rhodococcus opacus B4]
gi|302425253|sp|C1ASP6.1|PSA_RHOOB RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|226238480|dbj|BAH48828.1| 20S proteasome alpha-type subunit [Rhodococcus opacus B4]
Length=259
Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/234 (69%), Positives = 186/234 (80%), Gaps = 2/234 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SVV L + GVLFVAENPS +L K+SELYDR+
Sbjct 1 MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV G K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY + L A
Sbjct 121 EICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+ IAV ALR G A G++ + VASLEVAVLD +RPRRAFRRI G+AL+ L+
Sbjct 181 VGIAVNALRQGGAGE--GEKRNVDVASLEVAVLDQSRPRRAFRRIAGAALEQLV 232
>gi|325676827|ref|ZP_08156500.1| proteasome, alpha subunit [Rhodococcus equi ATCC 33707]
gi|325552375|gb|EGD22064.1| proteasome, alpha subunit [Rhodococcus equi ATCC 33707]
Length=264
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/249 (64%), Positives = 189/249 (76%), Gaps = 1/249 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SV+ L YA GVLFVAENPS +L K+SELYDR+
Sbjct 1 MTLPYYASAEQIMRDRSELARKGIARGRSVIVLTYADGVLFVAENPSTALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANGYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV + +LYRITYDGSI DE FVVMGGTTEPIA+AL+ESY L +A
Sbjct 121 EICVAEVGPQEGPRHAQLYRITYDGSIVDEQQFVVMGGTTEPIASALRESYRPGMDLAEA 180
Query 181 LRIAVAALRAGSADTSG-GDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES 239
+ +AV ALR G+ +G ++ LGV LEVAVLD +RPRR FRRI G+AL+ LL +
Sbjct 181 VSVAVTALRDGTPSGNGDSERRALGVTGLEVAVLDQSRPRRTFRRIAGAALEPLLPAPSA 240
Query 240 PQSDGESSG 248
P+ + G
Sbjct 241 PKQESAEGG 249
>gi|312139723|ref|YP_004007059.1| 20S proteasome alpha subunit prca [Rhodococcus equi 103S]
gi|311889062|emb|CBH48375.1| putative 20S proteasome alpha subunit PrcA [Rhodococcus equi
103S]
Length=264
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/249 (64%), Positives = 189/249 (76%), Gaps = 1/249 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+RSELARKGIAR +SV+ L YA GVLFVAENPS +L K+SELYDR+
Sbjct 1 MTLPYYASAEQIMRDRSELARKGIARGRSVIVLTYADGVLFVAENPSTALHKVSELYDRL 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct 61 GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANGYAQTLGTIFTEQPKPYEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV + +LYRITYDGSI DE FVVMGGTTEPIA+AL+ESY L +A
Sbjct 121 EICVAEVGPQEGPRHAQLYRITYDGSIVDEQQFVVMGGTTEPIASALRESYRPGMDLAEA 180
Query 181 LRIAVAALRAGSADTSG-GDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES 239
+ +AV ALR G+ +G ++ LGV LEVAVLD +RPRR FRRI G+AL+ LL +
Sbjct 181 VSVAVTALRDGTPSGNGDSERRALGVTGLEVAVLDQSRPRRTFRRIAGAALEPLLPAPSA 240
Query 240 PQSDGESSG 248
P+ + G
Sbjct 241 PKQESAEGG 249
>gi|40889398|pdb|1Q5R|A Chain A, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
gi|40889399|pdb|1Q5R|B Chain B, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
gi|40889400|pdb|1Q5R|C Chain C, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
gi|40889401|pdb|1Q5R|D Chain D, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
gi|40889402|pdb|1Q5R|E Chain E, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
gi|40889403|pdb|1Q5R|F Chain F, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
gi|40889404|pdb|1Q5R|G Chain G, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
Length=259
Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/227 (71%), Positives = 181/227 (80%), Gaps = 2/227 (0%)
Query 8 SPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGK 67
S EQ MR+RSELARKGIAR +SVV L + GVLFVAENPS +L K+SELYDR+GFAA GK
Sbjct 8 SAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGK 67
Query 68 FNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEV 127
+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEVE+CVAEV
Sbjct 68 YNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEV 127
Query 128 AHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAA 187
G K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY + L A+ IAV A
Sbjct 128 GRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNA 187
Query 188 LRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
LR G A G++ + VASLEVAVLD +RPRRAFRRI G+AL+ L+
Sbjct 188 LRQGGA--GEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLV 232
>gi|343927936|ref|ZP_08767402.1| 20S proteasome alpha-type subunit [Gordonia alkanivorans NBRC
16433]
gi|343762159|dbj|GAA14328.1| 20S proteasome alpha-type subunit [Gordonia alkanivorans NBRC
16433]
Length=266
Score = 301 bits (770), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/237 (64%), Positives = 185/237 (79%), Gaps = 4/237 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++FPY+ S EQ MR+RSELARKGIAR +SVV L YA GVLFVAENPS +L+K SE+YDR+
Sbjct 1 MTFPYYASAEQIMRDRSELARKGIARGRSVVILTYADGVLFVAENPSNTLRKTSEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF++LR+ GIQ AD RGY+YDR DV+G LAN YA LG++FTEQAKP+EV
Sbjct 61 GFAAVGKYNEFESLRKAGIQLADMRGYSYDRADVSGLSLANTYANALGSVFTEQAKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEVA G+ K +LYRI+YDGSI DE F+VMGG TEPIA ALKESYA + +L +A
Sbjct 121 ELCVAEVARAGKPKPSQLYRISYDGSITDETRFLVMGGATEPIAAALKESYAPDMALAEA 180
Query 181 LRIAVAALRAGSADTSGGDQPT---LGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+ +AV AL A AD+ G + L LEVA+LD NRPRRAF+R+T +A++ LL
Sbjct 181 IGVAVKAL-ATPADSGNGAPASPRELTAGDLEVAILDRNRPRRAFKRLTSAAVEELL 236
>gi|333919678|ref|YP_004493259.1| proteasome [Amycolicicoccus subflavus DQS3-9A1]
gi|333481899|gb|AEF40459.1| Proteasome [Amycolicicoccus subflavus DQS3-9A1]
Length=249
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/241 (64%), Positives = 182/241 (76%), Gaps = 7/241 (2%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+ PY+ S EQ MR+RSELARKGIAR +SVV L YA GVLFVAENPS +L K+SELYDR+
Sbjct 3 MGLPYYASAEQIMRDRSELARKGIARGRSVVVLTYADGVLFVAENPSTALHKVSELYDRL 62
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR GI AD RGY+YDRRDVTGR LAN YAQ LGTIFTEQ KPYEV
Sbjct 63 GFAAVGKYNEFENLRRSGILHADMRGYSYDRRDVTGRALANAYAQLLGTIFTEQPKPYEV 122
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEV + + +LYRI+YDGSIADEP+++VMGG+TEPI LKESY + L A
Sbjct 123 ELCVAEVGAPRQPRAAQLYRISYDGSIADEPNYIVMGGSTEPIVTELKESYDHSFPLERA 182
Query 181 LRIAVAALRAGSADT-----SGGDQP--TLGVASLEVAVLDANRPRRAFRRITGSALQAL 233
+ +AV AL+ +A + GG LG +LEVA+LD N+PRRAFRRI G L+++
Sbjct 183 IPVAVGALQKAAAPSGQPAGQGGQTEGRILGPNALEVAILDQNKPRRAFRRIRGPQLESI 242
Query 234 L 234
L
Sbjct 243 L 243
>gi|134098821|ref|YP_001104482.1| 20S proteasome alpha-subunit [Saccharopolyspora erythraea NRRL
2338]
gi|291005824|ref|ZP_06563797.1| 20S proteasome, A and B subunits [Saccharopolyspora erythraea
NRRL 2338]
gi|302595680|sp|A4FBY2.1|PSA_SACEN RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|133911444|emb|CAM01557.1| 20S proteasome alpha-subunit [Saccharopolyspora erythraea NRRL
2338]
Length=256
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/249 (61%), Positives = 186/249 (75%), Gaps = 8/249 (3%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ P++ SPEQ MRERSELARKGIAR +SVV L YAGGVLFVAENPS +L K+SE+YDR+
Sbjct 1 MTMPFYTSPEQLMRERSELARKGIARGRSVVVLKYAGGVLFVAENPSTTLHKVSEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+++EF++LR G++ AD RGY+YDRRDVTGR LAN YAQ LG IFTEQ KP+EV
Sbjct 61 GFAAVGRYSEFESLRVAGVRIADVRGYSYDRRDVTGRALANTYAQHLGAIFTEQIKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV + +LYR+TYDGSI DEP +VVMGG + I LK+S+++ L +A
Sbjct 121 EICVAEVGQTADND--QLYRLTYDGSIVDEPQYVVMGGQADTITTTLKDSFSDGLELAEA 178
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQ-ES 239
+A+ AL +G T LGV LEVAVLD RP R FRRITG+AL+ALL Q ES
Sbjct 179 AGLAIRALSSGGEGTR-----ELGVGQLEVAVLDRARPNRTFRRITGAALKALLPSQEES 233
Query 240 PQSDGESSG 248
+DGE+SG
Sbjct 234 GSTDGEASG 242
>gi|54025140|ref|YP_119382.1| putative proteasome subunit alpha [Nocardia farcinica IFM 10152]
gi|81374567|sp|Q5YUX3.1|PSA_NOCFA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|54016648|dbj|BAD58018.1| putative proteasome alpha subunit [Nocardia farcinica IFM 10152]
Length=258
Score = 294 bits (752), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 145/247 (59%), Positives = 185/247 (75%), Gaps = 0/247 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ PY+ S EQ MR+++ELARKGIAR +SVV L Y GVLFVAENPS +L K+SELYDR+
Sbjct 1 MTLPYYASAEQIMRDKTELARKGIARGRSVVVLTYDKGVLFVAENPSATLHKVSELYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF++LRRGGI AD RGY YDRRDVTGR LAN YAQ LGT+F +Q KP+EV
Sbjct 61 GFAAVGKYNEFESLRRGGILQADLRGYQYDRRDVTGRALANAYAQALGTVFNDQLKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV + ++ LYRI +DG+I DE FVVMGGTTEPI ALK+SY L+ A
Sbjct 121 EICVAEVGYPEQSPEAVLYRINFDGAIVDEREFVVMGGTTEPIVAALKDSYQPGLDLSSA 180
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+ +AV AL+A + + ++ T+GV+ LEVA L+ RPRRAFRR+T +AL+ LLV
Sbjct 181 VGVAVQALQASGPEGADKEKRTIGVSQLEVATLEQARPRRAFRRVTKTALEQLLVGNGVD 240
Query 241 QSDGESS 247
S G+++
Sbjct 241 TSVGKAT 247
>gi|257056205|ref|YP_003134037.1| 20S proteasome subunit (alpha or beta) [Saccharomonospora viridis
DSM 43017]
gi|302595681|sp|C7MWV6.1|PSA_SACVD RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|256586077|gb|ACU97210.1| 20S proteasome subunit (alpha or beta) [Saccharomonospora viridis
DSM 43017]
Length=255
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/235 (61%), Positives = 178/235 (76%), Gaps = 4/235 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ P + SPEQ MRERSELARKGIAR +SVV L Y GGVLFVAENPS +L K+SE+YDR+
Sbjct 1 MTMPLYASPEQLMRERSELARKGIARGRSVVVLKYRGGVLFVAENPSPTLHKVSEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+++EF++LRRGGI+ D +GY YDRRDV R LANVYAQTL TIFTEQ KP+EV
Sbjct 61 GFAAVGRYSEFESLRRGGIRHVDLQGYMYDRRDVNARALANVYAQTLSTIFTEQLKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIA-DEPHFVVMGGTTEPIANALKESYAENASLTD 179
E+CVAEV + + ELYR+TYDGSI DEP FVVMGG T+ I L+E+Y+++ L
Sbjct 121 EICVAEVGN--NSSEDELYRLTYDGSIVMDEPKFVVMGGQTDAINAKLRETYSDDMELAT 178
Query 180 ALRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
AL +AV ALRA S + G+ T + LEVA+LD RP R FRRITG+ L++L+
Sbjct 179 ALAVAVEALRAPSTSGASGNGET-EPSKLEVAILDRERPGRKFRRITGAELESLM 232
>gi|331697107|ref|YP_004333346.1| proteasome subunit alpha [Pseudonocardia dioxanivorans CB1190]
gi|326951796|gb|AEA25493.1| proteasome, alpha subunit [Pseudonocardia dioxanivorans CB1190]
Length=267
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/236 (64%), Positives = 185/236 (79%), Gaps = 4/236 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ P++ S +Q +R+RSELARKGIAR +SVV L YAGGVLFVAEN S +L K+SE+YDR+
Sbjct 1 MTMPFYSSVDQLLRDRSELARKGIARGRSVVVLTYAGGVLFVAENHSTALHKVSEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G++NEF+NLR GGI+ AD RGY+YDRRDVTGR LANVYAQTLGTIF EQ KP+EV
Sbjct 61 GFAAVGRYNEFENLRTGGIRAADVRGYSYDRRDVTGRWLANVYAQTLGTIFIEQQKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
ELCVAEV +T +LYRITYDGSI DEP FVVMGG TEPI+ L E++ L DA
Sbjct 121 ELCVAEVGE--DTGSDQLYRITYDGSITDEPRFVVMGGQTEPISAKLGETFEPGQELADA 178
Query 181 LRIAVAALRAGSADTSG--GDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+ +AV L+A +A +G ++ LGV +LEVAVLD RPRR+FRRITG+AL+ LL
Sbjct 179 IAVAVGGLQAVAAPGNGAAAEERVLGVGALEVAVLDRGRPRRSFRRITGNALRELL 234
>gi|256376368|ref|YP_003100028.1| 20S proteasome subunits A and B [Actinosynnema mirum DSM 43827]
gi|302425185|sp|C6WID9.1|PSA_ACTMD RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|255920671|gb|ACU36182.1| 20S proteasome A and B subunits [Actinosynnema mirum DSM 43827]
Length=263
Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/236 (64%), Positives = 177/236 (75%), Gaps = 2/236 (0%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ P + SPEQ +R+RSE ARKGI+R +SVV L YA GVLFVAENPS +L K+SE+YDR+
Sbjct 1 MTMPLYASPEQILRDRSEYARKGISRGRSVVVLRYADGVLFVAENPSSTLHKVSEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G+++EF+NLR+ GI+FAD RGY D RDVTGR LANVYAQTLG+IFTEQ KP EV
Sbjct 61 GFAAVGRYSEFENLRQAGIRFADVRGYQNDPRDVTGRSLANVYAQTLGSIFTEQIKPLEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV H E LYR+TYDGSI +EP VMGG E A ALKESY E L A
Sbjct 121 EICVAEVGHTPEHDT--LYRLTYDGSIVEEPQHSVMGGQAETTATALKESYEEGLPLAAA 178
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVD 236
LR+AV AL AGSA T G L A+LE AVL+ +RPRRAFRR+ G+AL ALL D
Sbjct 179 LRVAVKALSAGSASTGNGKPELLEAANLEAAVLERDRPRRAFRRLKGTALAALLQD 234
>gi|330468522|ref|YP_004406265.1| proteasome subunit alpha [Verrucosispora maris AB-18-032]
gi|328811493|gb|AEB45665.1| proteasome subunit alpha [Verrucosispora maris AB-18-032]
Length=276
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/234 (60%), Positives = 171/234 (74%), Gaps = 4/234 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ ++ SPEQ MR+RSELARKGIAR +S V L+YAGGVLFVAEN S +L K+SE+YDR+
Sbjct 1 MAMQFYASPEQIMRDRSELARKGIARGRSAVVLSYAGGVLFVAENLSSTLHKVSEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA GK+NEF+NLRR G++ AD G +YDRRDVTG LAN YAQTLG IFTEQ+KP+EV
Sbjct 61 GFAAVGKYNEFENLRRAGVRMADLNGLSYDRRDVTGLALANAYAQTLGAIFTEQSKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVAEV E LYR+TYDGS+ DEP + MGG +E IA LK + + SL DA
Sbjct 121 EICVAEVGATPEED--SLYRLTYDGSVNDEPGRMAMGGQSEAIAGVLKSHHQPDMSLGDA 178
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
+++AV AL S GG T+ LEVAVLD +R R FRRITG+AL ALL
Sbjct 179 VKVAVQAL--SSVGGEGGAARTIAANQLEVAVLDRSRVGRTFRRITGAALTALL 230
>gi|159037958|ref|YP_001537211.1| 20S proteasome subunits A and B [Salinispora arenicola CNS-205]
gi|302595682|sp|A8M2A4.1|PSA_SALAI RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|157916793|gb|ABV98220.1| 20S proteasome A and B subunits [Salinispora arenicola CNS-205]
Length=273
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 138/241 (58%), Positives = 173/241 (72%), Gaps = 4/241 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ ++ SPEQ MR+RSELARKGIAR +S V L+YAGGVLFVAEN S +L K+ E+YDR+
Sbjct 1 MAMQFYASPEQIMRDRSELARKGIARGRSAVVLSYAGGVLFVAENLSSALHKVGEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G++NEF+NLRR G++ AD G +YDRRDVTGR LAN +AQTLG IFTEQ+KP+EV
Sbjct 61 GFAAVGRYNEFENLRRAGVRMADLNGLSYDRRDVTGRALANAFAQTLGAIFTEQSKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVA+V T ELYR+TYDGS+ DEP + MGG E I LK ++ + SL DA
Sbjct 121 EICVAQVG--ATTADDELYRLTYDGSVNDEPGRMAMGGQAEAITGVLKSNHRPDMSLGDA 178
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP 240
+++AV AL GS GG T+ LEVAVLD R R FRR+TG+AL LL D +
Sbjct 179 VKVAVQAL--GSVGGEGGAARTIAADQLEVAVLDRGRVGRTFRRVTGAALTVLLDDGAAG 236
Query 241 Q 241
Q
Sbjct 237 Q 237
>gi|145594776|ref|YP_001159073.1| 20S proteasome subunits A and B [Salinispora tropica CNB-440]
gi|302595683|sp|A4X745.1|PSA_SALTO RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|145304113|gb|ABP54695.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
Length=260
Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/230 (59%), Positives = 171/230 (75%), Gaps = 4/230 (1%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
++ ++ SPEQ MR+RSELARKGIAR +S V L+YAGGVLFVAEN S +L K+ E+YDR+
Sbjct 1 MAMQFYASPEQIMRDRSELARKGIARGRSAVVLSYAGGVLFVAENLSSALHKVGEIYDRI 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
GFAA G++NEF+NLRR G++ AD G +YDRRDVTGR LAN +AQTLG IFTEQ+KP+EV
Sbjct 61 GFAAVGRYNEFENLRRAGVRMADLNGLSYDRRDVTGRALANSFAQTLGAIFTEQSKPFEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+CVA+V E ELYR+TYDGS+ DEP + MGG E IA ALK ++ + SL DA
Sbjct 121 EICVAQVGVTAEDD--ELYRLTYDGSVNDEPGRMAMGGQAEAIAGALKSNHRSDMSLGDA 178
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSAL 230
+++AV AL GS GG T+ LEVA+LD +R R FRR+TG+AL
Sbjct 179 VKVAVRAL--GSVGGEGGAARTIAADQLEVAILDRHRDGRTFRRVTGAAL 226
>gi|336178170|ref|YP_004583545.1| proteasome subunit alpha [Frankia symbiont of Datisca glomerata]
gi|334859150|gb|AEH09624.1| proteasome, alpha subunit [Frankia symbiont of Datisca glomerata]
Length=240
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 138/235 (59%), Positives = 173/235 (74%), Gaps = 4/235 (1%)
Query 1 VSFPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDR 59
++ P+ + SPEQ +R+RSE ARKGIAR +SVV +YA G+LFVAENPS +L KISE+YDR
Sbjct 1 MTMPFGYASPEQQVRDRSEYARKGIARGRSVVVRSYADGILFVAENPSSTLHKISEIYDR 60
Query 60 VGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYE 119
V FAA GK+NEF+NLR G++ D RGY YDRRDVTGR LAN YAQTLGTIFT+ KPYE
Sbjct 61 VAFAAVGKYNEFENLRTAGVRMMDVRGYMYDRRDVTGRALANFYAQTLGTIFTDSIKPYE 120
Query 120 VELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTD 179
VE+ VAEV + ++YR+TYDGSIADE FV +GG +E + +LKE +A+ L
Sbjct 121 VEIVVAEVGE--DAVSDQIYRLTYDGSIADERGFVAIGGQSEQVNTSLKEHHADAQPLAT 178
Query 180 ALRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
ALR+A ALRAG+ + GD+ L A+LEVA+LD R RR F+RI+G L ALL
Sbjct 179 ALRVAANALRAGTPPGANGDR-VLSSANLEVAMLDRTRSRRLFKRISGPQLDALL 232
>gi|288917498|ref|ZP_06411863.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
gi|288351044|gb|EFC85256.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
Length=242
Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 137/239 (58%), Positives = 176/239 (74%), Gaps = 6/239 (2%)
Query 1 VSFPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDR 59
++ P+ + SPEQ +R++SE ARKGIAR +SVV L Y G+LFVAENPS +L KISE+YDR
Sbjct 1 MTMPFGYASPEQQVRDKSEYARKGIARGRSVVVLTYVDGILFVAENPSSTLHKISEIYDR 60
Query 60 VGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYE 119
+GFAA GK+NEF+NLR GI+ DTRGY YDRRDVT R LAN YAQTLG IFTE KPYE
Sbjct 61 IGFAAVGKYNEFENLRTAGIRIMDTRGYMYDRRDVTSRALANAYAQTLGAIFTESIKPYE 120
Query 120 VELCVAEVAHYGET-KRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLT 178
VE+ VAEV G+T ++YR+TYDGSIADE F+ +GG +E + +L+E + E L
Sbjct 121 VEIVVAEV---GDTVAADQIYRLTYDGSIADERGFIAIGGQSEQVMTSLREHHTEGQPLA 177
Query 179 DALRIAVAALRAGS-ADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVD 236
ALR+AV+AL AG+ T+ + +L A+LEVA+LD R RR F+RI GS L++LL +
Sbjct 178 TALRVAVSALTAGAPPGTAQNGERSLTAANLEVAMLDRTRSRRQFKRIAGSQLESLLAE 236
>gi|302425216|sp|A8LH53.2|PSA_FRASN RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
Length=241
Score = 267 bits (683), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/235 (58%), Positives = 168/235 (72%), Gaps = 3/235 (1%)
Query 1 VSFPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDR 59
++ P+ + SPEQ +R++SE ARKGIAR +SVV L Y G+LFVAENPS +L KISE+YDR
Sbjct 1 MTMPFGYASPEQQVRDKSEYARKGIARGRSVVVLTYVDGILFVAENPSTTLHKISEMYDR 60
Query 60 VGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYE 119
+GFAA GK+NEF+NLR GI+ DTRGY YDRRDVT R LAN YAQTLG IFTE KPYE
Sbjct 61 IGFAAVGKYNEFENLRTAGIRIMDTRGYMYDRRDVTSRALANAYAQTLGAIFTESIKPYE 120
Query 120 VELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTD 179
VE+ VAEV H +++R+TYDGSIADE F+ +GG +E + +L+E + E L
Sbjct 121 VEIVVAEVGHTAADD--QIFRLTYDGSIADERGFIAIGGQSEQVLTSLREHHTEGQPLAT 178
Query 180 ALRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
ALR+AV AL AG+ + + TL +LEVA+LD R RR F+RI GS L LL
Sbjct 179 ALRVAVDALTAGAPPGAQNGERTLTAGNLEVAMLDRKRSRRLFKRIVGSQLDGLL 233
>gi|302527207|ref|ZP_07279549.1| 20S proteasome alpha-subunit [Streptomyces sp. AA4]
gi|302436102|gb|EFL07918.1| 20S proteasome alpha-subunit [Streptomyces sp. AA4]
Length=263
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/246 (59%), Positives = 176/246 (72%), Gaps = 2/246 (0%)
Query 3 FPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGF 62
P + SPEQ MRERSELARKGIAR +SVV L YAGGVLFVAENPS +L K+SE+YDR+GF
Sbjct 1 MPLYASPEQLMRERSELARKGIARGRSVVVLKYAGGVLFVAENPSATLHKVSEIYDRIGF 60
Query 63 AAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVEL 122
AA G+++EF+NLR GI+ AD +GY YDRRDV+ R LAN YA TLG+IFTEQ KP+EVE+
Sbjct 61 AAVGRYSEFENLRVAGIRHADLKGYQYDRRDVSARALANAYAATLGSIFTEQLKPFEVEV 120
Query 123 CVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALR 182
CVAEV +LYR+T+DGSI DE FVVMGG TEPI+ LK+ + L AL
Sbjct 121 CVAEVG--ATAAEDQLYRLTFDGSIFDESPFVVMGGQTEPISAKLKDVVDPDHDLATALA 178
Query 183 IAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQS 242
A+ LRA + ++G LEVAVLD +PRRAFRR++G+AL+ALL +E P
Sbjct 179 TAIEGLRATATSSNGNGSAAEAEIKLEVAVLDRAKPRRAFRRLSGAALEALLPAKEEPAE 238
Query 243 DGESSG 248
+ SG
Sbjct 239 KPDESG 244
>gi|158316641|ref|YP_001509149.1| 20S proteasome subunits A and B [Frankia sp. EAN1pec]
gi|158112046|gb|ABW14243.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
Length=239
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/233 (58%), Positives = 166/233 (72%), Gaps = 3/233 (1%)
Query 3 FPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG 61
P+ + SPEQ +R++SE ARKGIAR +SVV L Y G+LFVAENPS +L KISE+YDR+G
Sbjct 1 MPFGYASPEQQVRDKSEYARKGIARGRSVVVLTYVDGILFVAENPSTTLHKISEMYDRIG 60
Query 62 FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE 121
FAA GK+NEF+NLR GI+ DTRGY YDRRDVT R LAN YAQTLG IFTE KPYEVE
Sbjct 61 FAAVGKYNEFENLRTAGIRIMDTRGYMYDRRDVTSRALANAYAQTLGAIFTESIKPYEVE 120
Query 122 LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL 181
+ VAEV H +++R+TYDGSIADE F+ +GG +E + +L+E + E L AL
Sbjct 121 IVVAEVGHTAADD--QIFRLTYDGSIADERGFIAIGGQSEQVLTSLREHHTEGQPLATAL 178
Query 182 RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
R+AV AL AG+ + + TL +LEVA+LD R RR F+RI GS L LL
Sbjct 179 RVAVDALTAGAPPGAQNGERTLTAGNLEVAMLDRKRSRRLFKRIVGSQLDGLL 231
>gi|72162190|ref|YP_289847.1| 20S proteasome alpha-subunit [Thermobifida fusca YX]
gi|123629304|sp|Q47NZ5.1|PSA_THEFY RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome
alpha subunit; AltName: Full=Proteasome core protein
PrcA
gi|71915922|gb|AAZ55824.1| putative 20S proteasome alpha-subunit [Thermobifida fusca YX]
Length=249
Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/234 (55%), Positives = 170/234 (73%), Gaps = 7/234 (2%)
Query 1 VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV 60
+S P+++SPEQ M+++++ ARKGIAR +S V L Y GG+LFVA+N SR+L KISELYDRV
Sbjct 1 MSMPFYVSPEQIMKDKADYARKGIARGRSAVVLQYEGGILFVADNVSRTLHKISELYDRV 60
Query 61 GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV 120
FAA G++NEF+NLR G++FAD GY YDR DVTG+ LAN YAQTLG +FTE +KP+EV
Sbjct 61 AFAAVGRYNEFENLRLAGVRFADMHGYTYDRSDVTGQMLANAYAQTLGAVFTESSKPWEV 120
Query 121 ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA 180
E+ VAEV ++ ++YRIT+DGS+ DE F+ MGG+ E + AL+E Y +N SLTDA
Sbjct 121 EIVVAEVGDSPDS--DQIYRITFDGSVVDERDFLAMGGSAERVTAALRERYVKNMSLTDA 178
Query 181 LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL 234
LR+AV L G++ L +SLEVA+L+ +RP R FRRI G L +L
Sbjct 179 LRVAVHGLA-----HENGERRELKASSLEVAMLERSRPHRKFRRIQGERLARML 227
>gi|312197565|ref|YP_004017626.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
gi|311228901|gb|ADP81756.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
Length=246
Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/243 (56%), Positives = 173/243 (72%), Gaps = 9/243 (3%)
Query 1 VSFPY--FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYD 58
++ P+ + SPEQ +R++SE ARKGIAR +SVV + Y+ G+LFVAENPS +L KISE+YD
Sbjct 1 MTMPFGGYASPEQWVRDKSEYARKGIARGRSVVIVTYSDGILFVAENPSVTLHKISEVYD 60
Query 59 RVGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPY 118
R+ FAA GK+NEF+NLR GI+ D +GY YDRRDVTGR LAN YAQTLGTIFTE KPY
Sbjct 61 RIAFAAVGKYNEFENLRTAGIRLTDMKGYTYDRRDVTGRALANAYAQTLGTIFTESIKPY 120
Query 119 EVELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLT 178
EVE+ VAEV E+ ++YR+TYDGSIADE FV +GG +E + +L+E + L
Sbjct 121 EVEIVVAEVGSTPESD--QIYRLTYDGSIADERGFVAIGGQSEQVNASLREHHTAGEPLA 178
Query 179 DALRIAVAALRAGSADTSGG-----DQPTLGVASLEVAVLDANRPRRAFRRITGSALQAL 233
ALR+AV AL AG+ + G + L +LEVAVLD NRPRR F+R+TG L+ L
Sbjct 179 QALRVAVRALGAGTQPGAPGAAAQNGERVLSAGNLEVAVLDRNRPRRQFKRVTGPQLEGL 238
Query 234 LVD 236
L +
Sbjct 239 LAE 241
Lambda K H
0.316 0.132 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 352647919680
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40