BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2109c

Length=248
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|90109389|pdb|2FHH|A  Chain A, Crystal Structure Of Mycobacteri...   499    1e-139
gi|15609246|ref|NP_216625.1|  proteasome (alpha subunit) PrcA [My...   499    2e-139
gi|90109361|pdb|2FHG|A  Chain A, Crystal Structure Of Mycobacteri...   499    2e-139
gi|254364916|ref|ZP_04980962.1|  proteasome (alpha subunit) prcA ...   497    6e-139
gi|15841601|ref|NP_336638.1|  proteasome, alpha subunit [Mycobact...   496    1e-138
gi|31793289|ref|NP_855782.1|  proteasome (alpha subunit) PrcA [My...   493    1e-137
gi|258588450|pdb|3HF9|A  Chain A, Crystal Structure Of Mycobacter...   480    6e-134
gi|15827688|ref|NP_301951.1|  proteasome [alpha]-type subunit 1 [...   450    1e-124
gi|467020|gb|AAA17205.1|  B2126_C3_260 [Mycobacterium leprae]          446    2e-123
gi|240171536|ref|ZP_04750195.1|  proteasome, alpha subunit [Mycob...   439    2e-121
gi|118617840|ref|YP_906172.1|  proteasome (alpha subunit) PrcA [M...   429    2e-118
gi|296165181|ref|ZP_06847728.1|  proteasome [Mycobacterium parasc...   428    5e-118
gi|183983083|ref|YP_001851374.1|  proteasome (alpha subunit) PrcA...   427    8e-118
gi|41407932|ref|NP_960768.1|  PrcA [Mycobacterium avium subsp. pa...   418    4e-115
gi|254819641|ref|ZP_05224642.1|  peptidase, T1 family protein [My...   417    9e-115
gi|336461986|gb|EGO40835.1|  proteasome, alpha subunit, bacterial...   416    1e-114
gi|342859802|ref|ZP_08716455.1|  proteasome subunit alpha [Mycoba...   410    6e-113
gi|118468612|ref|YP_888184.1|  proteasome subunit alpha [Mycobact...   403    1e-110
gi|120404420|ref|YP_954249.1|  20S proteasome, A and B subunits [...   401    4e-110
gi|294993517|ref|ZP_06799208.1|  20S proteasome, A and B subunits...   392    2e-107
gi|108800095|ref|YP_640292.1|  20S proteasome, A and B subunits [...   389    2e-106
gi|145223665|ref|YP_001134343.1|  20S proteasome, A and B subunit...   389    3e-106
gi|333990436|ref|YP_004523050.1|  proteasome (alpha subunit) PrcA...   382    3e-104
gi|169629259|ref|YP_001702908.1|  proteasome (subunit alpha) PrcA...   353    1e-95 
gi|111017862|ref|YP_700834.1|  proteasome alpha subunit [Rhodococ...   327    1e-87 
gi|75491638|sp|Q53084.1|PSA2_RHOER  RecName: Full=Proteasome subu...   324    9e-87 
gi|226306660|ref|YP_002766620.1|  20S proteasome alpha-type subun...   324    9e-87 
gi|75491634|sp|Q53080.1|PSA1_RHOER  RecName: Full=Proteasome subu...   323    2e-86 
gi|229493669|ref|ZP_04387454.1|  proteasome, alpha subunit [Rhodo...   322    2e-86 
gi|226359995|ref|YP_002777773.1|  20S proteasome alpha-type subun...   322    3e-86 
gi|325676827|ref|ZP_08156500.1|  proteasome, alpha subunit [Rhodo...   316    2e-84 
gi|312139723|ref|YP_004007059.1|  20S proteasome alpha subunit pr...   316    2e-84 
gi|40889398|pdb|1Q5R|A  Chain A, The Rhodococcus 20s Proteasome W...   315    3e-84 
gi|343927936|ref|ZP_08767402.1|  20S proteasome alpha-type subuni...   301    8e-80 
gi|333919678|ref|YP_004493259.1|  proteasome [Amycolicicoccus sub...   300    1e-79 
gi|134098821|ref|YP_001104482.1|  20S proteasome alpha-subunit [S...   299    2e-79 
gi|54025140|ref|YP_119382.1|  putative proteasome subunit alpha [...   294    9e-78 
gi|257056205|ref|YP_003134037.1|  20S proteasome subunit (alpha o...   283    1e-74 
gi|331697107|ref|YP_004333346.1|  proteasome subunit alpha [Pseud...   282    4e-74 
gi|256376368|ref|YP_003100028.1|  20S proteasome subunits A and B...   275    3e-72 
gi|330468522|ref|YP_004406265.1|  proteasome subunit alpha [Verru...   273    1e-71 
gi|159037958|ref|YP_001537211.1|  20S proteasome subunits A and B...   271    5e-71 
gi|145594776|ref|YP_001159073.1|  20S proteasome subunits A and B...   271    9e-71 
gi|336178170|ref|YP_004583545.1|  proteasome subunit alpha [Frank...   268    5e-70 
gi|288917498|ref|ZP_06411863.1|  20S proteasome A and B subunits ...   268    8e-70 
gi|302425216|sp|A8LH53.2|PSA_FRASN  RecName: Full=Proteasome subu...   267    8e-70 
gi|302527207|ref|ZP_07279549.1|  20S proteasome alpha-subunit [St...   267    1e-69 
gi|158316641|ref|YP_001509149.1|  20S proteasome subunits A and B...   266    2e-69 
gi|72162190|ref|YP_289847.1|  20S proteasome alpha-subunit [Therm...   265    5e-69 
gi|312197565|ref|YP_004017626.1|  20S proteasome A and B subunits...   263    1e-68 


>gi|90109389|pdb|2FHH|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome 
In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109391|pdb|2FHH|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome 
In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109393|pdb|2FHH|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome 
In Complex With A Peptidyl Boronate Inhibitor Mln-273
 11 more sequence titles
 Length=251

 Score =  499 bits (1285),  Expect = 1e-139, Method: Compositional matrix adjust.
 Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)

Query  2    SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG  61
            SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG
Sbjct  5    SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG  64

Query  62   FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE  121
            FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE
Sbjct  65   FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE  124

Query  122  LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL  181
            LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL
Sbjct  125  LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL  184

Query  182  RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ  241
            RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ
Sbjct  185  RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ  244

Query  242  SDGESSG  248
            SDGESSG
Sbjct  245  SDGESSG  251


>gi|15609246|ref|NP_216625.1| proteasome (alpha subunit) PrcA [Mycobacterium tuberculosis H37Rv]
 gi|148661924|ref|YP_001283447.1| proteasome subunit alpha [Mycobacterium tuberculosis H37Ra]
 gi|148823320|ref|YP_001288074.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis F11]
 115 more sequence titles
 Length=248

 Score =  499 bits (1284),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 247/248 (99%), Positives = 248/248 (100%), Gaps = 0/248 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240

Query  241  QSDGESSG  248
            QSDGESSG
Sbjct  241  QSDGESSG  248


>gi|90109361|pdb|2FHG|A Chain A, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109363|pdb|2FHG|B Chain B, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109365|pdb|2FHG|D Chain D, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 11 more sequence titles
 Length=250

 Score =  499 bits (1284),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)

Query  2    SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG  61
            SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG
Sbjct  4    SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG  63

Query  62   FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE  121
            FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE
Sbjct  64   FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE  123

Query  122  LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL  181
            LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL
Sbjct  124  LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL  183

Query  182  RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ  241
            RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ
Sbjct  184  RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQ  243

Query  242  SDGESSG  248
            SDGESSG
Sbjct  244  SDGESSG  250


>gi|254364916|ref|ZP_04980962.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134150430|gb|EBA42475.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis str. 
Haarlem]
Length=248

 Score =  497 bits (1280),  Expect = 6e-139, Method: Compositional matrix adjust.
 Identities = 246/248 (99%), Positives = 247/248 (99%), Gaps = 0/248 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKTPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240

Query  241  QSDGESSG  248
            QSDGESSG
Sbjct  241  QSDGESSG  248


>gi|15841601|ref|NP_336638.1| proteasome, alpha subunit [Mycobacterium tuberculosis CDC1551]
 gi|254232269|ref|ZP_04925596.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis C]
 gi|13881851|gb|AAK46452.1| proteasome, alpha subunit [Mycobacterium tuberculosis CDC1551]
 gi|124601328|gb|EAY60338.1| proteasome (alpha subunit) prcA [Mycobacterium tuberculosis C]
 gi|323719322|gb|EGB28463.1| proteasome alpha subunit prcA [Mycobacterium tuberculosis CDC1551A]
Length=248

 Score =  496 bits (1277),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 246/248 (99%), Positives = 247/248 (99%), Gaps = 0/248 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240

Query  241  QSDGESSG  248
            QSDGESSG
Sbjct  241  QSDGESSG  248


>gi|31793289|ref|NP_855782.1| proteasome (alpha subunit) PrcA [Mycobacterium bovis AF2122/97]
 gi|121637991|ref|YP_978215.1| proteasome subunit alpha PrcA [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990485|ref|YP_002645172.1| proteasome subunit alpha [Mycobacterium bovis BCG str. Tokyo 
172]
 30 more sequence titles
 Length=248

 Score =  493 bits (1268),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 245/248 (99%), Positives = 246/248 (99%), Gaps = 0/248 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            L IAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP
Sbjct  181  LGIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240

Query  241  QSDGESSG  248
            QSDGESSG
Sbjct  241  QSDGESSG  248


>gi|258588450|pdb|3HF9|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Proteasome 
Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588451|pdb|3HF9|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Proteasome 
Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588452|pdb|3HF9|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Proteasome 
Open-Gate Mutant Modified By Inhibitor Gl1
 53 more sequence titles
 Length=240

 Score =  480 bits (1236),  Expect = 6e-134, Method: Compositional matrix adjust.
 Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%)

Query  10   EQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGKFN  69
            EQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGKFN
Sbjct  2    EQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGKFN  61

Query  70   EFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEVAH  129
            EFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEVAH
Sbjct  62   EFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEVAH  121

Query  130  YGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAALR  189
            YGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAALR
Sbjct  122  YGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAALR  181

Query  190  AGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQSDGESSG  248
            AGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQSDGESSG
Sbjct  182  AGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQSDGESSG  240


>gi|15827688|ref|NP_301951.1| proteasome [alpha]-type subunit 1 [Mycobacterium leprae TN]
 gi|221230165|ref|YP_002503581.1| proteasome alpha-type subunit 1 [Mycobacterium leprae Br4923]
 gi|81552795|sp|Q9S375.1|PSA_MYCLE RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|302425195|sp|B8ZRF4.1|PSA_MYCLB RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|4200275|emb|CAA22934.1| putative proteasome alpha-type subunit 1 [Mycobacterium leprae]
 gi|13093239|emb|CAC31704.1| proteasome [alpha]-type subunit 1 [Mycobacterium leprae]
 gi|219933272|emb|CAR71418.1| proteasome [alpha]-type subunit 1 [Mycobacterium leprae Br4923]
Length=265

 Score =  450 bits (1157),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 223/244 (92%), Positives = 231/244 (95%), Gaps = 0/244 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR +SVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGRSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSI DEPHF+VMGGTTE IANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSINDEPHFMVMGGTTESIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            L IAVAALRAGSAD +G DQPTLGVASLEVAVLDANRPRRAFRRI GS L+ALL +++S 
Sbjct  181  LGIAVAALRAGSADAAGSDQPTLGVASLEVAVLDANRPRRAFRRIIGSGLEALLREKDSK  240

Query  241  QSDG  244
             S G
Sbjct  241  GSKG  244


>gi|467020|gb|AAA17205.1| B2126_C3_260 [Mycobacterium leprae]
Length=265

 Score =  446 bits (1147),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 221/244 (91%), Positives = 230/244 (95%), Gaps = 0/244 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRE+ ELARKGIAR +SVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMREQRELARKGIARGRSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSI DEPHF+VMGGTTE IANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSINDEPHFMVMGGTTESIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            L IAVAALRAGSAD +G DQPTLGVASLEVAVLDANRPRRAFRRI GS L+ALL +++S 
Sbjct  181  LGIAVAALRAGSADAAGSDQPTLGVASLEVAVLDANRPRRAFRRIIGSGLEALLREKDSK  240

Query  241  QSDG  244
             S G
Sbjct  241  GSKG  244


>gi|240171536|ref|ZP_04750195.1| proteasome, alpha subunit [Mycobacterium kansasii ATCC 12478]
Length=268

 Score =  439 bits (1130),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 216/234 (93%), Positives = 222/234 (95%), Gaps = 0/234 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVALAY+GGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALAYSGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIA ALKESYAENA L DA
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIATALKESYAENADLPDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            LRIAV ALRA SADTSG  QP LGVA+LEVA+LDANRPRRAFRRITG+ L+ LL
Sbjct  181  LRIAVEALRASSADTSGNGQPALGVANLEVAILDANRPRRAFRRITGAQLETLL  234


>gi|118617840|ref|YP_906172.1| proteasome (alpha subunit) PrcA [Mycobacterium ulcerans Agy99]
 gi|302425202|sp|A0PQT2.1|PSA_MYCUA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|118569950|gb|ABL04701.1| proteasome (alpha subunit) PrcA [Mycobacterium ulcerans Agy99]
Length=267

 Score =  429 bits (1103),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 209/239 (88%), Positives = 220/239 (93%), Gaps = 0/239 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVALA+AGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALAFAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI  ALK +Y ENA L DA
Sbjct  121  ELCVAEVAHYGETKAPELYRITYDGSIADEPHFVVMGGTTEPITTALKNTYTENADLPDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES  239
            L IAV ALRAGSA+ S  DQP LGVASLE A+LDAN+PRRAFRR+T S L+ LL +++S
Sbjct  181  LDIAVEALRAGSAENSSNDQPVLGVASLEAAILDANKPRRAFRRLTRSTLETLLQERDS  239


>gi|296165181|ref|ZP_06847728.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899370|gb|EFG78829.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=257

 Score =  428 bits (1100),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 215/257 (84%), Positives = 227/257 (89%), Gaps = 9/257 (3%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI  ALKESYAENA L +A
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKESYAENADLREA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES-  239
             +IAV ALRAGSAD SGGDQP+  V SLEVA+LD NRPRRAFRRI  + L+ LL + +S 
Sbjct  181  TQIAVKALRAGSADGSGGDQPSPDVGSLEVAILDVNRPRRAFRRINRATLENLLHEGDSQ  240

Query  240  --------PQSDGESSG  248
                    P+S+G+S G
Sbjct  241  QPETNGDGPESNGDSVG  257


>gi|183983083|ref|YP_001851374.1| proteasome (alpha subunit) PrcA [Mycobacterium marinum M]
 gi|302425196|sp|B2HFV5.1|PSA_MYCMM RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|183176409|gb|ACC41519.1| proteasome (alpha subunit) PrcA [Mycobacterium marinum M]
Length=267

 Score =  427 bits (1097),  Expect = 8e-118, Method: Compositional matrix adjust.
 Identities = 208/239 (88%), Positives = 220/239 (93%), Gaps = 0/239 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVALA+AGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALAFAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGE+K PELYRITYDGSIADEPHFVVMGGTTEPI  ALK +Y ENA L DA
Sbjct  121  ELCVAEVAHYGESKAPELYRITYDGSIADEPHFVVMGGTTEPITTALKNTYTENADLPDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES  239
            L IAV ALRAGSA+ S  DQP LGVASLE A+LDAN+PRRAFRR+T S L+ LL +++S
Sbjct  181  LGIAVEALRAGSAENSSNDQPVLGVASLEAAILDANKPRRAFRRLTRSTLETLLQERDS  239


>gi|41407932|ref|NP_960768.1| PrcA [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118466837|ref|YP_881604.1| peptidase, T1 family protein [Mycobacterium avium 104]
 gi|254775074|ref|ZP_05216590.1| peptidase, T1 family protein [Mycobacterium avium subsp. avium 
ATCC 25291]
 gi|81571312|sp|Q73YW9.1|PSA_MYCPA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|302425190|sp|A0QFB6.1|PSA_MYCA1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|41396286|gb|AAS04151.1| PrcA [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118168124|gb|ABK69021.1| peptidase, T1 family protein [Mycobacterium avium 104]
Length=256

 Score =  418 bits (1074),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 210/244 (87%), Positives = 220/244 (91%), Gaps = 1/244 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI  ALK+SYAENA+L +A
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENANLREA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
             RIAV ALRAGS ++S GDQ  L V SLEVA+LD NRPRRAFRRI    L+ LL + +S 
Sbjct  181  TRIAVRALRAGS-ESSNGDQSALDVGSLEVAILDVNRPRRAFRRINRPTLENLLRELDSN  239

Query  241  QSDG  244
             SDG
Sbjct  240  GSDG  243


>gi|254819641|ref|ZP_05224642.1| peptidase, T1 family protein [Mycobacterium intracellulare ATCC 
13950]
Length=261

 Score =  417 bits (1071),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 207/234 (89%), Positives = 217/234 (93%), Gaps = 1/234 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGE+K PELYRITYDGSIADEPHFVVMGGTTEPI  ALK+SYAENA+L +A
Sbjct  121  ELCVAEVAHYGESKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENANLREA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
             RIAV ALRAGS ++S GDQ TL VASLEVA+LD NRPRRAFRRI  + L+ LL
Sbjct  181  TRIAVKALRAGS-ESSNGDQSTLDVASLEVAILDVNRPRRAFRRINRATLENLL  233


>gi|336461986|gb|EGO40835.1| proteasome, alpha subunit, bacterial type [Mycobacterium avium 
subsp. paratuberculosis S397]
Length=256

 Score =  416 bits (1070),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 209/244 (86%), Positives = 219/244 (90%), Gaps = 1/244 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGR LANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRHLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI  ALK+SYAENA+L +A
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENANLREA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
             RIAV ALRAGS ++S GDQ  L V SLEVA+LD NRPRRAFRRI    L+ LL + +S 
Sbjct  181  TRIAVRALRAGS-ESSNGDQSALDVGSLEVAILDVNRPRRAFRRINRPTLENLLRELDSN  239

Query  241  QSDG  244
             SDG
Sbjct  240  GSDG  243


>gi|342859802|ref|ZP_08716455.1| proteasome subunit alpha [Mycobacterium colombiense CECT 3035]
 gi|342132934|gb|EGT86154.1| proteasome subunit alpha [Mycobacterium colombiense CECT 3035]
Length=254

 Score =  410 bits (1055),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 213/256 (84%), Positives = 220/256 (86%), Gaps = 12/256 (4%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR KSVVAL YAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGKSVVALVYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI  ALK+SYAENA L  A
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPITTALKDSYAENADLRQA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLV-----  235
             RIAV ALRAGS ++S GD   L V SLEVA+LD NRPRRAFRRI  + L+ LL      
Sbjct  181  TRIAVKALRAGS-ESSNGD--ALDVGSLEVAILDVNRPRRAFRRINRATLENLLRELDSD  237

Query  236  ----DQESPQSDGESS  247
                D E   SDGESS
Sbjct  238  GSGGDGEPADSDGESS  253


>gi|118468612|ref|YP_888184.1| proteasome subunit alpha [Mycobacterium smegmatis str. MC2 155]
 gi|259534758|sp|A0QZ46.1|PSA_MYCS2 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|2293464|gb|AAC45615.1| proteasome alpha subunit [Mycobacterium smegmatis str. MC2 155]
 gi|118169899|gb|ABK70795.1| proteasome alpha subunit [Mycobacterium smegmatis str. MC2 155]
Length=246

 Score =  403 bits (1036),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 201/245 (83%), Positives = 216/245 (89%), Gaps = 3/245 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR +SVVALAY+ GVLFVAENPSRSLQK+SELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGRSVVALAYSEGVLFVAENPSRSLQKVSELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+FNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAVGRFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPI  AL ESY ENASL DA
Sbjct  121  ELCVAEVAHYGETKAPELYRITYDGSIADEPHFVVMGGTTEPIIAALNESYTENASLQDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            + IAV AL   SA   G +  +LG ++LEVA+LDA RPRRAFRRITG+AL+ALL +Q   
Sbjct  181  VEIAVKAL---SASAEGAEPRSLGPSTLEVAILDAGRPRRAFRRITGAALEALLPEQPQQ  237

Query  241  QSDGE  245
               G+
Sbjct  238  ADSGD  242


>gi|120404420|ref|YP_954249.1| 20S proteasome, A and B subunits [Mycobacterium vanbaalenii PYR-1]
 gi|302425203|sp|A1TAP3.1|PSA_MYCVP RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|119957238|gb|ABM14243.1| 20S proteasome, A and B subunits [Mycobacterium vanbaalenii PYR-1]
Length=254

 Score =  401 bits (1031),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 199/246 (81%), Positives = 219/246 (90%), Gaps = 3/246 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR +SV+ALAYA GVLFVAENPSRSLQK+SELYDR+
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGRSVIALAYADGVLFVAENPSRSLQKVSELYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+FNEF+NLR GGI+FADT+GYAY RRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAVGRFNEFNNLRSGGIRFADTQGYAYSRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAH+GETK PELYRITYDGSIADEPHFVVMGGTTEPI+ AL ESY EN SL DA
Sbjct  121  ELCVAEVAHHGETKAPELYRITYDGSIADEPHFVVMGGTTEPISTALNESYKENLSLADA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            + IAV AL AG    +G +  TLG A+LEVAVLDANRPRRAFRRITGSAL+ALL + +S 
Sbjct  181  VSIAVKALGAG---VNGAEPRTLGPATLEVAVLDANRPRRAFRRITGSALEALLPEVDSS  237

Query  241  QSDGES  246
            +S  E+
Sbjct  238  ESSNEA  243


>gi|294993517|ref|ZP_06799208.1| 20S proteasome, A and B subunits [Mycobacterium tuberculosis 
210]
Length=198

 Score =  392 bits (1008),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 194/198 (98%), Positives = 195/198 (99%), Gaps = 0/198 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA
Sbjct  121  ELCVAEVAHYGETKPPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180

Query  181  LRIAVAALRAGSADTSGG  198
            L  AVAALRAGSADTSGG
Sbjct  181  LGFAVAALRAGSADTSGG  198


>gi|108800095|ref|YP_640292.1| 20S proteasome, A and B subunits [Mycobacterium sp. MCS]
 gi|119869222|ref|YP_939174.1| 20S proteasome, A and B subunits [Mycobacterium sp. KMS]
 gi|126435719|ref|YP_001071410.1| 20S proteasome, A and B subunits [Mycobacterium sp. JLS]
 6 more sequence titles
 Length=250

 Score =  389 bits (1000),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 192/234 (83%), Positives = 211/234 (91%), Gaps = 3/234 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR +SVVALAYA GVLFVAENPSRSLQK+SELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGRSVVALAYADGVLFVAENPSRSLQKVSELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+FNEF+NLR GGI+FADT+GYAY RRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAVGRFNEFNNLRSGGIRFADTQGYAYSRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAH+GE+K PELYRITYDGSIADEPHFVVMGG TEPI   L +SY ENA L DA
Sbjct  121  ELCVAEVAHFGESKAPELYRITYDGSIADEPHFVVMGGATEPIIAKLNDSYTENAELADA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            +RIAV AL +G    +G ++ TLG ++LEVA+LDANRPRRAFRRITGSAL+ALL
Sbjct  181  VRIAVDALESGG---NGAERRTLGPSTLEVAILDANRPRRAFRRITGSALEALL  231


>gi|145223665|ref|YP_001134343.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
 gi|315443991|ref|YP_004076870.1| 20S proteasome subunit (alpha or beta) [Mycobacterium sp. Spyr1]
 gi|302425194|sp|A4TB55.1|PSA_MYCGI RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|145216151|gb|ABP45555.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
 gi|315262294|gb|ADT99035.1| 20S proteasome subunit (alpha or beta) [Mycobacterium sp. Spyr1]
Length=251

 Score =  389 bits (998),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 201/248 (82%), Positives = 220/248 (89%), Gaps = 3/248 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRERSELARKGIAR +SV+ALAYA GVLFVAENPSRSLQK+SELYDRV
Sbjct  1    MSFPYFISPEQAMRERSELARKGIARGRSVIALAYADGVLFVAENPSRSLQKVSELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+FNEF+NLR GGI+FADT+GYAY RRDVTGRQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAVGRFNEFNNLRSGGIRFADTQGYAYSRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVAHYGETK PELYRITYDGSIADEPHFVVMGGTTEPIA AL ESYAENASL DA
Sbjct  121  ELCVAEVAHYGETKAPELYRITYDGSIADEPHFVVMGGTTEPIATALNESYAENASLEDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            +RIAVAAL    A  +G +  TLG ++LEVA+LDANRPRRAFRRITG+AL+ALL   ++ 
Sbjct  181  VRIAVAAL---GAGGNGAEPRTLGPSTLEVAILDANRPRRAFRRITGAALEALLPQADTK  237

Query  241  QSDGESSG  248
                +S G
Sbjct  238  DDSQDSEG  245


>gi|333990436|ref|YP_004523050.1| proteasome (alpha subunit) PrcA [Mycobacterium sp. JDM601]
 gi|333486404|gb|AEF35796.1| proteasome (alpha subunit) PrcA [Mycobacterium sp. JDM601]
Length=248

 Score =  382 bits (980),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 196/251 (79%), Positives = 213/251 (85%), Gaps = 10/251 (3%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +SFPYFISPEQAMRER ELARKGIAR + V+ALAYA GVLFVAENPSRSLQKISELYDRV
Sbjct  1    MSFPYFISPEQAMRERGELARKGIARGRGVIALAYADGVLFVAENPSRSLQKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAAAG+ NEF+NLRRGGIQFADTRGYAYDRRDVT RQLANVYAQTLGTIFTEQAKPYEV
Sbjct  61   GFAAAGRINEFENLRRGGIQFADTRGYAYDRRDVTARQLANVYAQTLGTIFTEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVA VA+ G+TK PELYRITYDGSI DEPHFVVMGGTTEP+  ALKESY ENA L DA
Sbjct  121  ELCVAGVAYQGQTKAPELYRITYDGSITDEPHFVVMGGTTEPVIAALKESYTENAELADA  180

Query  181  LRIAVAALRAGSADT-SGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES  239
            L IAV AL+    DT +G +Q  LG  +LEVA+LDANRP+RAFRRI  S L+ LL     
Sbjct  181  LHIAVNALK--QTDTGNGAEQRELGPGTLEVAILDANRPKRAFRRIARSTLEELL-----  233

Query  240  PQSD--GESSG  248
            PQ+D  GE+SG
Sbjct  234  PQADSSGENSG  244


>gi|169629259|ref|YP_001702908.1| proteasome (subunit alpha) PrcA [Mycobacterium abscessus ATCC 
19977]
 gi|302425191|sp|B1MAI3.1|PSA_MYCA9 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|169241226|emb|CAM62254.1| Proteasome (alpha subunit) PrcA [Mycobacterium abscessus]
Length=260

 Score =  353 bits (906),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 174/245 (72%), Positives = 204/245 (84%), Gaps = 3/245 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++FPY+ S EQ MR+RSELARKGI+R +SVVAL Y  GVLFVAENPS SLQK+SE+YDRV
Sbjct  1    MTFPYYASVEQLMRDRSELARKGISRGRSVVALTYTDGVLFVAENPSNSLQKVSEVYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GKFNEFD LRRGGIQ+AD RGYAYDRRDV+GRQLAN+YA+ LGTIF EQAKPYEV
Sbjct  61   GFAAVGKFNEFDRLRRGGIQWADMRGYAYDRRDVSGRQLANIYAEALGTIFNEQAKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCV EVAHYG    P LYRITYDGSIADEPH+VVMGG TEP+ N+LKESY E+++L DA
Sbjct  121  ELCVGEVAHYGRDTEPVLYRITYDGSIADEPHWVVMGGNTEPVINSLKESYVEDSALKDA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            +  AV AL+AG+A  +G +   LG   LEVAVL+ +RPRRAFRRI G+AL+ALL +  SP
Sbjct  181  VGFAVKALQAGTAGANGSEGRALG--GLEVAVLEQSRPRRAFRRIKGAALEALLPEDFSP  238

Query  241  -QSDG  244
             Q++G
Sbjct  239  GQTEG  243


>gi|111017862|ref|YP_700834.1| proteasome alpha subunit [Rhodococcus jostii RHA1]
 gi|123341024|sp|Q0SIG0.1|PSA_RHOSR RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|110817392|gb|ABG92676.1| proteasome alpha subunit [Rhodococcus jostii RHA1]
Length=259

 Score =  327 bits (837),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 164/243 (68%), Positives = 191/243 (79%), Gaps = 2/243 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SVV L +  GVLFVAENPS +L K+SELYDR+
Sbjct  1    MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV   G  K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY  +  L  A
Sbjct  121  EICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            + IAV ALR G A    G++  + VASLEVAVLD +RPRRAFRRITG AL+ L+  + +P
Sbjct  181  VGIAVNALRQGGAGE--GEKRNVDVASLEVAVLDQSRPRRAFRRITGPALEQLIPAEPAP  238

Query  241  QSD  243
             S+
Sbjct  239  ASE  241


>gi|75491638|sp|Q53084.1|PSA2_RHOER RecName: Full=Proteasome subunit alpha 2; AltName: Full=20S proteasome 
alpha subunit 2; AltName: Full=Proteasome core protein 
PrcA 2
 gi|847775|gb|AAC45737.1| proteasome alpha-type subunit 2 [Rhodococcus erythropolis]
Length=255

 Score =  324 bits (830),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 160/253 (64%), Positives = 198/253 (79%), Gaps = 7/253 (2%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SVV L Y  GVLFVAENPSR+L K+SELYDR+
Sbjct  1    MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAE+  +G +   +LYRITYDGSIADE  FVVMGGTTEPI  A++ESY  +  L  A
Sbjct  121  EICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESA  180

Query  181  LRIAVAALRAGS---ADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL---  234
            +R+AV AL+ G    A T+  +  TL V++LEVAVLD+NRPRRAF+RI GS+L+ +L   
Sbjct  181  VRLAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGSSLEEMLPTP  240

Query  235  -VDQESPQSDGES  246
               +++P ++G++
Sbjct  241  AATEDAPPANGDA  253


>gi|226306660|ref|YP_002766620.1| 20S proteasome alpha-type subunit [Rhodococcus erythropolis PR4]
 gi|302425252|sp|C0ZZU6.1|PSA_RHOE4 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|226185777|dbj|BAH33881.1| 20S proteasome alpha-type subunit [Rhodococcus erythropolis PR4]
Length=254

 Score =  324 bits (830),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 159/237 (68%), Positives = 189/237 (80%), Gaps = 3/237 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SVV L Y  GVLFVAENPSR+L K+SELYDR+
Sbjct  1    MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAE+  +G +   +LYRITYDGSIADE  FVVMGGTTEPI  A++ESY  +  L  A
Sbjct  121  EICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESA  180

Query  181  LRIAVAALRAGS---ADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            +R+AV AL+ G    A T+  +  TL V++LEVAVLD+NRPRRAF+RI GSAL+ +L
Sbjct  181  VRLAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGSALEEML  237


>gi|75491634|sp|Q53080.1|PSA1_RHOER RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S proteasome 
alpha subunit 1; AltName: Full=Proteasome core protein 
PrcA 1
 gi|40889384|pdb|1Q5Q|A Chain A, The Rhodococcus 20s Proteasome
 gi|40889385|pdb|1Q5Q|B Chain B, The Rhodococcus 20s Proteasome
 13 more sequence titles
 Length=259

 Score =  323 bits (827),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 161/234 (69%), Positives = 186/234 (80%), Gaps = 2/234 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SVV L +  GVLFVAENPS +L K+SELYDR+
Sbjct  1    MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV   G  K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY  +  L  A
Sbjct  121  EICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            + IAV ALR G A    G++  + VASLEVAVLD +RPRRAFRRI G+AL+ L+
Sbjct  181  VGIAVNALRQGGA--GEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLV  232


>gi|229493669|ref|ZP_04387454.1| proteasome, alpha subunit [Rhodococcus erythropolis SK121]
 gi|229319630|gb|EEN85466.1| proteasome, alpha subunit [Rhodococcus erythropolis SK121]
Length=255

 Score =  322 bits (826),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 160/253 (64%), Positives = 197/253 (78%), Gaps = 7/253 (2%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SVV L Y  GVLFVAENPSR+L K+SELYDR+
Sbjct  1    MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAE+  +G +   +LYRITYDGSIADE  FVVMGGTTEPI  A++ESY  +  L  A
Sbjct  121  EICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESA  180

Query  181  LRIAVAALRAG---SADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL---  234
            +RIAV AL+ G    A T+  +  TL V++LEVAVLD+NRPRRAF+RI G+ L+ +L   
Sbjct  181  VRIAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGTVLEEMLPAP  240

Query  235  -VDQESPQSDGES  246
               +++P ++G++
Sbjct  241  AAVEDAPPANGDA  253


>gi|226359995|ref|YP_002777773.1| 20S proteasome alpha-type subunit [Rhodococcus opacus B4]
 gi|302425253|sp|C1ASP6.1|PSA_RHOOB RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|226238480|dbj|BAH48828.1| 20S proteasome alpha-type subunit [Rhodococcus opacus B4]
Length=259

 Score =  322 bits (825),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 161/234 (69%), Positives = 186/234 (80%), Gaps = 2/234 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SVV L +  GVLFVAENPS +L K+SELYDR+
Sbjct  1    MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV   G  K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY  +  L  A
Sbjct  121  EICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            + IAV ALR G A    G++  + VASLEVAVLD +RPRRAFRRI G+AL+ L+
Sbjct  181  VGIAVNALRQGGAGE--GEKRNVDVASLEVAVLDQSRPRRAFRRIAGAALEQLV  232


>gi|325676827|ref|ZP_08156500.1| proteasome, alpha subunit [Rhodococcus equi ATCC 33707]
 gi|325552375|gb|EGD22064.1| proteasome, alpha subunit [Rhodococcus equi ATCC 33707]
Length=264

 Score =  316 bits (810),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 159/249 (64%), Positives = 189/249 (76%), Gaps = 1/249 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SV+ L YA GVLFVAENPS +L K+SELYDR+
Sbjct  1    MTLPYYASAEQIMRDRSELARKGIARGRSVIVLTYADGVLFVAENPSTALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANGYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV      +  +LYRITYDGSI DE  FVVMGGTTEPIA+AL+ESY     L +A
Sbjct  121  EICVAEVGPQEGPRHAQLYRITYDGSIVDEQQFVVMGGTTEPIASALRESYRPGMDLAEA  180

Query  181  LRIAVAALRAGSADTSG-GDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES  239
            + +AV ALR G+   +G  ++  LGV  LEVAVLD +RPRR FRRI G+AL+ LL    +
Sbjct  181  VSVAVTALRDGTPSGNGDSERRALGVTGLEVAVLDQSRPRRTFRRIAGAALEPLLPAPSA  240

Query  240  PQSDGESSG  248
            P+ +    G
Sbjct  241  PKQESAEGG  249


>gi|312139723|ref|YP_004007059.1| 20S proteasome alpha subunit prca [Rhodococcus equi 103S]
 gi|311889062|emb|CBH48375.1| putative 20S proteasome alpha subunit PrcA [Rhodococcus equi 
103S]
Length=264

 Score =  316 bits (810),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 159/249 (64%), Positives = 189/249 (76%), Gaps = 1/249 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+RSELARKGIAR +SV+ L YA GVLFVAENPS +L K+SELYDR+
Sbjct  1    MTLPYYASAEQIMRDRSELARKGIARGRSVIVLTYADGVLFVAENPSTALHKVSELYDRL  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEV
Sbjct  61   GFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANGYAQTLGTIFTEQPKPYEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV      +  +LYRITYDGSI DE  FVVMGGTTEPIA+AL+ESY     L +A
Sbjct  121  EICVAEVGPQEGPRHAQLYRITYDGSIVDEQQFVVMGGTTEPIASALRESYRPGMDLAEA  180

Query  181  LRIAVAALRAGSADTSG-GDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQES  239
            + +AV ALR G+   +G  ++  LGV  LEVAVLD +RPRR FRRI G+AL+ LL    +
Sbjct  181  VSVAVTALRDGTPSGNGDSERRALGVTGLEVAVLDQSRPRRTFRRIAGAALEPLLPAPSA  240

Query  240  PQSDGESSG  248
            P+ +    G
Sbjct  241  PKQESAEGG  249


>gi|40889398|pdb|1Q5R|A Chain A, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
 gi|40889399|pdb|1Q5R|B Chain B, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
 gi|40889400|pdb|1Q5R|C Chain C, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
 gi|40889401|pdb|1Q5R|D Chain D, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
 gi|40889402|pdb|1Q5R|E Chain E, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
 gi|40889403|pdb|1Q5R|F Chain F, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
 gi|40889404|pdb|1Q5R|G Chain G, The Rhodococcus 20s Proteasome With Unprocessed Pro-Peptides
Length=259

 Score =  315 bits (807),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 159/227 (71%), Positives = 181/227 (80%), Gaps = 2/227 (0%)

Query  8    SPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGFAAAGK  67
            S EQ MR+RSELARKGIAR +SVV L +  GVLFVAENPS +L K+SELYDR+GFAA GK
Sbjct  8    SAEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGK  67

Query  68   FNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVELCVAEV  127
            +NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQTLGTIFTEQ KPYEVE+CVAEV
Sbjct  68   YNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEV  127

Query  128  AHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALRIAVAA  187
               G  K P+LYRITYDGSI DE HFVVMGGTTEPIA A++ESY  +  L  A+ IAV A
Sbjct  128  GRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNA  187

Query  188  LRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            LR G A    G++  + VASLEVAVLD +RPRRAFRRI G+AL+ L+
Sbjct  188  LRQGGA--GEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLV  232


>gi|343927936|ref|ZP_08767402.1| 20S proteasome alpha-type subunit [Gordonia alkanivorans NBRC 
16433]
 gi|343762159|dbj|GAA14328.1| 20S proteasome alpha-type subunit [Gordonia alkanivorans NBRC 
16433]
Length=266

 Score =  301 bits (770),  Expect = 8e-80, Method: Compositional matrix adjust.
 Identities = 150/237 (64%), Positives = 185/237 (79%), Gaps = 4/237 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++FPY+ S EQ MR+RSELARKGIAR +SVV L YA GVLFVAENPS +L+K SE+YDR+
Sbjct  1    MTFPYYASAEQIMRDRSELARKGIARGRSVVILTYADGVLFVAENPSNTLRKTSEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF++LR+ GIQ AD RGY+YDR DV+G  LAN YA  LG++FTEQAKP+EV
Sbjct  61   GFAAVGKYNEFESLRKAGIQLADMRGYSYDRADVSGLSLANTYANALGSVFTEQAKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEVA  G+ K  +LYRI+YDGSI DE  F+VMGG TEPIA ALKESYA + +L +A
Sbjct  121  ELCVAEVARAGKPKPSQLYRISYDGSITDETRFLVMGGATEPIAAALKESYAPDMALAEA  180

Query  181  LRIAVAALRAGSADTSGGDQPT---LGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            + +AV AL A  AD+  G   +   L    LEVA+LD NRPRRAF+R+T +A++ LL
Sbjct  181  IGVAVKAL-ATPADSGNGAPASPRELTAGDLEVAILDRNRPRRAFKRLTSAAVEELL  236


>gi|333919678|ref|YP_004493259.1| proteasome [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481899|gb|AEF40459.1| Proteasome [Amycolicicoccus subflavus DQS3-9A1]
Length=249

 Score =  300 bits (768),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 152/241 (64%), Positives = 182/241 (76%), Gaps = 7/241 (2%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +  PY+ S EQ MR+RSELARKGIAR +SVV L YA GVLFVAENPS +L K+SELYDR+
Sbjct  3    MGLPYYASAEQIMRDRSELARKGIARGRSVVVLTYADGVLFVAENPSTALHKVSELYDRL  62

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR GI  AD RGY+YDRRDVTGR LAN YAQ LGTIFTEQ KPYEV
Sbjct  63   GFAAVGKYNEFENLRRSGILHADMRGYSYDRRDVTGRALANAYAQLLGTIFTEQPKPYEV  122

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEV    + +  +LYRI+YDGSIADEP+++VMGG+TEPI   LKESY  +  L  A
Sbjct  123  ELCVAEVGAPRQPRAAQLYRISYDGSIADEPNYIVMGGSTEPIVTELKESYDHSFPLERA  182

Query  181  LRIAVAALRAGSADT-----SGGDQP--TLGVASLEVAVLDANRPRRAFRRITGSALQAL  233
            + +AV AL+  +A +      GG      LG  +LEVA+LD N+PRRAFRRI G  L+++
Sbjct  183  IPVAVGALQKAAAPSGQPAGQGGQTEGRILGPNALEVAILDQNKPRRAFRRIRGPQLESI  242

Query  234  L  234
            L
Sbjct  243  L  243


>gi|134098821|ref|YP_001104482.1| 20S proteasome alpha-subunit [Saccharopolyspora erythraea NRRL 
2338]
 gi|291005824|ref|ZP_06563797.1| 20S proteasome, A and B subunits [Saccharopolyspora erythraea 
NRRL 2338]
 gi|302595680|sp|A4FBY2.1|PSA_SACEN RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|133911444|emb|CAM01557.1| 20S proteasome alpha-subunit [Saccharopolyspora erythraea NRRL 
2338]
Length=256

 Score =  299 bits (766),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 150/249 (61%), Positives = 186/249 (75%), Gaps = 8/249 (3%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ P++ SPEQ MRERSELARKGIAR +SVV L YAGGVLFVAENPS +L K+SE+YDR+
Sbjct  1    MTMPFYTSPEQLMRERSELARKGIARGRSVVVLKYAGGVLFVAENPSTTLHKVSEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+++EF++LR  G++ AD RGY+YDRRDVTGR LAN YAQ LG IFTEQ KP+EV
Sbjct  61   GFAAVGRYSEFESLRVAGVRIADVRGYSYDRRDVTGRALANTYAQHLGAIFTEQIKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV    +    +LYR+TYDGSI DEP +VVMGG  + I   LK+S+++   L +A
Sbjct  121  EICVAEVGQTADND--QLYRLTYDGSIVDEPQYVVMGGQADTITTTLKDSFSDGLELAEA  178

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQ-ES  239
              +A+ AL +G   T       LGV  LEVAVLD  RP R FRRITG+AL+ALL  Q ES
Sbjct  179  AGLAIRALSSGGEGTR-----ELGVGQLEVAVLDRARPNRTFRRITGAALKALLPSQEES  233

Query  240  PQSDGESSG  248
              +DGE+SG
Sbjct  234  GSTDGEASG  242


>gi|54025140|ref|YP_119382.1| putative proteasome subunit alpha [Nocardia farcinica IFM 10152]
 gi|81374567|sp|Q5YUX3.1|PSA_NOCFA RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|54016648|dbj|BAD58018.1| putative proteasome alpha subunit [Nocardia farcinica IFM 10152]
Length=258

 Score =  294 bits (752),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 145/247 (59%), Positives = 185/247 (75%), Gaps = 0/247 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ PY+ S EQ MR+++ELARKGIAR +SVV L Y  GVLFVAENPS +L K+SELYDR+
Sbjct  1    MTLPYYASAEQIMRDKTELARKGIARGRSVVVLTYDKGVLFVAENPSATLHKVSELYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF++LRRGGI  AD RGY YDRRDVTGR LAN YAQ LGT+F +Q KP+EV
Sbjct  61   GFAAVGKYNEFESLRRGGILQADLRGYQYDRRDVTGRALANAYAQALGTVFNDQLKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV +  ++    LYRI +DG+I DE  FVVMGGTTEPI  ALK+SY     L+ A
Sbjct  121  EICVAEVGYPEQSPEAVLYRINFDGAIVDEREFVVMGGTTEPIVAALKDSYQPGLDLSSA  180

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            + +AV AL+A   + +  ++ T+GV+ LEVA L+  RPRRAFRR+T +AL+ LLV     
Sbjct  181  VGVAVQALQASGPEGADKEKRTIGVSQLEVATLEQARPRRAFRRVTKTALEQLLVGNGVD  240

Query  241  QSDGESS  247
             S G+++
Sbjct  241  TSVGKAT  247


>gi|257056205|ref|YP_003134037.1| 20S proteasome subunit (alpha or beta) [Saccharomonospora viridis 
DSM 43017]
 gi|302595681|sp|C7MWV6.1|PSA_SACVD RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|256586077|gb|ACU97210.1| 20S proteasome subunit (alpha or beta) [Saccharomonospora viridis 
DSM 43017]
Length=255

 Score =  283 bits (724),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 143/235 (61%), Positives = 178/235 (76%), Gaps = 4/235 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ P + SPEQ MRERSELARKGIAR +SVV L Y GGVLFVAENPS +L K+SE+YDR+
Sbjct  1    MTMPLYASPEQLMRERSELARKGIARGRSVVVLKYRGGVLFVAENPSPTLHKVSEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+++EF++LRRGGI+  D +GY YDRRDV  R LANVYAQTL TIFTEQ KP+EV
Sbjct  61   GFAAVGRYSEFESLRRGGIRHVDLQGYMYDRRDVNARALANVYAQTLSTIFTEQLKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIA-DEPHFVVMGGTTEPIANALKESYAENASLTD  179
            E+CVAEV +   +   ELYR+TYDGSI  DEP FVVMGG T+ I   L+E+Y+++  L  
Sbjct  121  EICVAEVGN--NSSEDELYRLTYDGSIVMDEPKFVVMGGQTDAINAKLRETYSDDMELAT  178

Query  180  ALRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            AL +AV ALRA S   + G+  T   + LEVA+LD  RP R FRRITG+ L++L+
Sbjct  179  ALAVAVEALRAPSTSGASGNGET-EPSKLEVAILDRERPGRKFRRITGAELESLM  232


>gi|331697107|ref|YP_004333346.1| proteasome subunit alpha [Pseudonocardia dioxanivorans CB1190]
 gi|326951796|gb|AEA25493.1| proteasome, alpha subunit [Pseudonocardia dioxanivorans CB1190]
Length=267

 Score =  282 bits (721),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 151/236 (64%), Positives = 185/236 (79%), Gaps = 4/236 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ P++ S +Q +R+RSELARKGIAR +SVV L YAGGVLFVAEN S +L K+SE+YDR+
Sbjct  1    MTMPFYSSVDQLLRDRSELARKGIARGRSVVVLTYAGGVLFVAENHSTALHKVSEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G++NEF+NLR GGI+ AD RGY+YDRRDVTGR LANVYAQTLGTIF EQ KP+EV
Sbjct  61   GFAAVGRYNEFENLRTGGIRAADVRGYSYDRRDVTGRWLANVYAQTLGTIFIEQQKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            ELCVAEV    +T   +LYRITYDGSI DEP FVVMGG TEPI+  L E++     L DA
Sbjct  121  ELCVAEVGE--DTGSDQLYRITYDGSITDEPRFVVMGGQTEPISAKLGETFEPGQELADA  178

Query  181  LRIAVAALRAGSADTSG--GDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            + +AV  L+A +A  +G   ++  LGV +LEVAVLD  RPRR+FRRITG+AL+ LL
Sbjct  179  IAVAVGGLQAVAAPGNGAAAEERVLGVGALEVAVLDRGRPRRSFRRITGNALRELL  234


>gi|256376368|ref|YP_003100028.1| 20S proteasome subunits A and B [Actinosynnema mirum DSM 43827]
 gi|302425185|sp|C6WID9.1|PSA_ACTMD RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|255920671|gb|ACU36182.1| 20S proteasome A and B subunits [Actinosynnema mirum DSM 43827]
Length=263

 Score =  275 bits (704),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 150/236 (64%), Positives = 177/236 (75%), Gaps = 2/236 (0%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++ P + SPEQ +R+RSE ARKGI+R +SVV L YA GVLFVAENPS +L K+SE+YDR+
Sbjct  1    MTMPLYASPEQILRDRSEYARKGISRGRSVVVLRYADGVLFVAENPSSTLHKVSEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G+++EF+NLR+ GI+FAD RGY  D RDVTGR LANVYAQTLG+IFTEQ KP EV
Sbjct  61   GFAAVGRYSEFENLRQAGIRFADVRGYQNDPRDVTGRSLANVYAQTLGSIFTEQIKPLEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV H  E     LYR+TYDGSI +EP   VMGG  E  A ALKESY E   L  A
Sbjct  121  EICVAEVGHTPEHDT--LYRLTYDGSIVEEPQHSVMGGQAETTATALKESYEEGLPLAAA  178

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVD  236
            LR+AV AL AGSA T  G    L  A+LE AVL+ +RPRRAFRR+ G+AL ALL D
Sbjct  179  LRVAVKALSAGSASTGNGKPELLEAANLEAAVLERDRPRRAFRRLKGTALAALLQD  234


>gi|330468522|ref|YP_004406265.1| proteasome subunit alpha [Verrucosispora maris AB-18-032]
 gi|328811493|gb|AEB45665.1| proteasome subunit alpha [Verrucosispora maris AB-18-032]
Length=276

 Score =  273 bits (699),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 140/234 (60%), Positives = 171/234 (74%), Gaps = 4/234 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++  ++ SPEQ MR+RSELARKGIAR +S V L+YAGGVLFVAEN S +L K+SE+YDR+
Sbjct  1    MAMQFYASPEQIMRDRSELARKGIARGRSAVVLSYAGGVLFVAENLSSTLHKVSEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA GK+NEF+NLRR G++ AD  G +YDRRDVTG  LAN YAQTLG IFTEQ+KP+EV
Sbjct  61   GFAAVGKYNEFENLRRAGVRMADLNGLSYDRRDVTGLALANAYAQTLGAIFTEQSKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVAEV    E     LYR+TYDGS+ DEP  + MGG +E IA  LK  +  + SL DA
Sbjct  121  EICVAEVGATPEED--SLYRLTYDGSVNDEPGRMAMGGQSEAIAGVLKSHHQPDMSLGDA  178

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            +++AV AL   S    GG   T+    LEVAVLD +R  R FRRITG+AL ALL
Sbjct  179  VKVAVQAL--SSVGGEGGAARTIAANQLEVAVLDRSRVGRTFRRITGAALTALL  230


>gi|159037958|ref|YP_001537211.1| 20S proteasome subunits A and B [Salinispora arenicola CNS-205]
 gi|302595682|sp|A8M2A4.1|PSA_SALAI RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|157916793|gb|ABV98220.1| 20S proteasome A and B subunits [Salinispora arenicola CNS-205]
Length=273

 Score =  271 bits (694),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 138/241 (58%), Positives = 173/241 (72%), Gaps = 4/241 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++  ++ SPEQ MR+RSELARKGIAR +S V L+YAGGVLFVAEN S +L K+ E+YDR+
Sbjct  1    MAMQFYASPEQIMRDRSELARKGIARGRSAVVLSYAGGVLFVAENLSSALHKVGEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G++NEF+NLRR G++ AD  G +YDRRDVTGR LAN +AQTLG IFTEQ+KP+EV
Sbjct  61   GFAAVGRYNEFENLRRAGVRMADLNGLSYDRRDVTGRALANAFAQTLGAIFTEQSKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVA+V     T   ELYR+TYDGS+ DEP  + MGG  E I   LK ++  + SL DA
Sbjct  121  EICVAQVG--ATTADDELYRLTYDGSVNDEPGRMAMGGQAEAITGVLKSNHRPDMSLGDA  178

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESP  240
            +++AV AL  GS    GG   T+    LEVAVLD  R  R FRR+TG+AL  LL D  + 
Sbjct  179  VKVAVQAL--GSVGGEGGAARTIAADQLEVAVLDRGRVGRTFRRVTGAALTVLLDDGAAG  236

Query  241  Q  241
            Q
Sbjct  237  Q  237


>gi|145594776|ref|YP_001159073.1| 20S proteasome subunits A and B [Salinispora tropica CNB-440]
 gi|302595683|sp|A4X745.1|PSA_SALTO RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|145304113|gb|ABP54695.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
Length=260

 Score =  271 bits (692),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 135/230 (59%), Positives = 171/230 (75%), Gaps = 4/230 (1%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            ++  ++ SPEQ MR+RSELARKGIAR +S V L+YAGGVLFVAEN S +L K+ E+YDR+
Sbjct  1    MAMQFYASPEQIMRDRSELARKGIARGRSAVVLSYAGGVLFVAENLSSALHKVGEIYDRI  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
            GFAA G++NEF+NLRR G++ AD  G +YDRRDVTGR LAN +AQTLG IFTEQ+KP+EV
Sbjct  61   GFAAVGRYNEFENLRRAGVRMADLNGLSYDRRDVTGRALANSFAQTLGAIFTEQSKPFEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+CVA+V    E    ELYR+TYDGS+ DEP  + MGG  E IA ALK ++  + SL DA
Sbjct  121  EICVAQVGVTAEDD--ELYRLTYDGSVNDEPGRMAMGGQAEAIAGALKSNHRSDMSLGDA  178

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSAL  230
            +++AV AL  GS    GG   T+    LEVA+LD +R  R FRR+TG+AL
Sbjct  179  VKVAVRAL--GSVGGEGGAARTIAADQLEVAILDRHRDGRTFRRVTGAAL  226


>gi|336178170|ref|YP_004583545.1| proteasome subunit alpha [Frankia symbiont of Datisca glomerata]
 gi|334859150|gb|AEH09624.1| proteasome, alpha subunit [Frankia symbiont of Datisca glomerata]
Length=240

 Score =  268 bits (686),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 138/235 (59%), Positives = 173/235 (74%), Gaps = 4/235 (1%)

Query  1    VSFPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDR  59
            ++ P+ + SPEQ +R+RSE ARKGIAR +SVV  +YA G+LFVAENPS +L KISE+YDR
Sbjct  1    MTMPFGYASPEQQVRDRSEYARKGIARGRSVVVRSYADGILFVAENPSSTLHKISEIYDR  60

Query  60   VGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYE  119
            V FAA GK+NEF+NLR  G++  D RGY YDRRDVTGR LAN YAQTLGTIFT+  KPYE
Sbjct  61   VAFAAVGKYNEFENLRTAGVRMMDVRGYMYDRRDVTGRALANFYAQTLGTIFTDSIKPYE  120

Query  120  VELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTD  179
            VE+ VAEV    +    ++YR+TYDGSIADE  FV +GG +E +  +LKE +A+   L  
Sbjct  121  VEIVVAEVGE--DAVSDQIYRLTYDGSIADERGFVAIGGQSEQVNTSLKEHHADAQPLAT  178

Query  180  ALRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            ALR+A  ALRAG+   + GD+  L  A+LEVA+LD  R RR F+RI+G  L ALL
Sbjct  179  ALRVAANALRAGTPPGANGDR-VLSSANLEVAMLDRTRSRRLFKRISGPQLDALL  232


>gi|288917498|ref|ZP_06411863.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
 gi|288351044|gb|EFC85256.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
Length=242

 Score =  268 bits (684),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 137/239 (58%), Positives = 176/239 (74%), Gaps = 6/239 (2%)

Query  1    VSFPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDR  59
            ++ P+ + SPEQ +R++SE ARKGIAR +SVV L Y  G+LFVAENPS +L KISE+YDR
Sbjct  1    MTMPFGYASPEQQVRDKSEYARKGIARGRSVVVLTYVDGILFVAENPSSTLHKISEIYDR  60

Query  60   VGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYE  119
            +GFAA GK+NEF+NLR  GI+  DTRGY YDRRDVT R LAN YAQTLG IFTE  KPYE
Sbjct  61   IGFAAVGKYNEFENLRTAGIRIMDTRGYMYDRRDVTSRALANAYAQTLGAIFTESIKPYE  120

Query  120  VELCVAEVAHYGET-KRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLT  178
            VE+ VAEV   G+T    ++YR+TYDGSIADE  F+ +GG +E +  +L+E + E   L 
Sbjct  121  VEIVVAEV---GDTVAADQIYRLTYDGSIADERGFIAIGGQSEQVMTSLREHHTEGQPLA  177

Query  179  DALRIAVAALRAGS-ADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVD  236
             ALR+AV+AL AG+   T+   + +L  A+LEVA+LD  R RR F+RI GS L++LL +
Sbjct  178  TALRVAVSALTAGAPPGTAQNGERSLTAANLEVAMLDRTRSRRQFKRIAGSQLESLLAE  236


>gi|302425216|sp|A8LH53.2|PSA_FRASN RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
Length=241

 Score =  267 bits (683),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 134/235 (58%), Positives = 168/235 (72%), Gaps = 3/235 (1%)

Query  1    VSFPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDR  59
            ++ P+ + SPEQ +R++SE ARKGIAR +SVV L Y  G+LFVAENPS +L KISE+YDR
Sbjct  1    MTMPFGYASPEQQVRDKSEYARKGIARGRSVVVLTYVDGILFVAENPSTTLHKISEMYDR  60

Query  60   VGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYE  119
            +GFAA GK+NEF+NLR  GI+  DTRGY YDRRDVT R LAN YAQTLG IFTE  KPYE
Sbjct  61   IGFAAVGKYNEFENLRTAGIRIMDTRGYMYDRRDVTSRALANAYAQTLGAIFTESIKPYE  120

Query  120  VELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTD  179
            VE+ VAEV H       +++R+TYDGSIADE  F+ +GG +E +  +L+E + E   L  
Sbjct  121  VEIVVAEVGHTAADD--QIFRLTYDGSIADERGFIAIGGQSEQVLTSLREHHTEGQPLAT  178

Query  180  ALRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            ALR+AV AL AG+   +   + TL   +LEVA+LD  R RR F+RI GS L  LL
Sbjct  179  ALRVAVDALTAGAPPGAQNGERTLTAGNLEVAMLDRKRSRRLFKRIVGSQLDGLL  233


>gi|302527207|ref|ZP_07279549.1| 20S proteasome alpha-subunit [Streptomyces sp. AA4]
 gi|302436102|gb|EFL07918.1| 20S proteasome alpha-subunit [Streptomyces sp. AA4]
Length=263

 Score =  267 bits (682),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 143/246 (59%), Positives = 176/246 (72%), Gaps = 2/246 (0%)

Query  3    FPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVGF  62
             P + SPEQ MRERSELARKGIAR +SVV L YAGGVLFVAENPS +L K+SE+YDR+GF
Sbjct  1    MPLYASPEQLMRERSELARKGIARGRSVVVLKYAGGVLFVAENPSATLHKVSEIYDRIGF  60

Query  63   AAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVEL  122
            AA G+++EF+NLR  GI+ AD +GY YDRRDV+ R LAN YA TLG+IFTEQ KP+EVE+
Sbjct  61   AAVGRYSEFENLRVAGIRHADLKGYQYDRRDVSARALANAYAATLGSIFTEQLKPFEVEV  120

Query  123  CVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDALR  182
            CVAEV         +LYR+T+DGSI DE  FVVMGG TEPI+  LK+    +  L  AL 
Sbjct  121  CVAEVG--ATAAEDQLYRLTFDGSIFDESPFVVMGGQTEPISAKLKDVVDPDHDLATALA  178

Query  183  IAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALLVDQESPQS  242
             A+  LRA +  ++G          LEVAVLD  +PRRAFRR++G+AL+ALL  +E P  
Sbjct  179  TAIEGLRATATSSNGNGSAAEAEIKLEVAVLDRAKPRRAFRRLSGAALEALLPAKEEPAE  238

Query  243  DGESSG  248
              + SG
Sbjct  239  KPDESG  244


>gi|158316641|ref|YP_001509149.1| 20S proteasome subunits A and B [Frankia sp. EAN1pec]
 gi|158112046|gb|ABW14243.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
Length=239

 Score =  266 bits (681),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 134/233 (58%), Positives = 166/233 (72%), Gaps = 3/233 (1%)

Query  3    FPY-FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRVG  61
             P+ + SPEQ +R++SE ARKGIAR +SVV L Y  G+LFVAENPS +L KISE+YDR+G
Sbjct  1    MPFGYASPEQQVRDKSEYARKGIARGRSVVVLTYVDGILFVAENPSTTLHKISEMYDRIG  60

Query  62   FAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEVE  121
            FAA GK+NEF+NLR  GI+  DTRGY YDRRDVT R LAN YAQTLG IFTE  KPYEVE
Sbjct  61   FAAVGKYNEFENLRTAGIRIMDTRGYMYDRRDVTSRALANAYAQTLGAIFTESIKPYEVE  120

Query  122  LCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDAL  181
            + VAEV H       +++R+TYDGSIADE  F+ +GG +E +  +L+E + E   L  AL
Sbjct  121  IVVAEVGHTAADD--QIFRLTYDGSIADERGFIAIGGQSEQVLTSLREHHTEGQPLATAL  178

Query  182  RIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            R+AV AL AG+   +   + TL   +LEVA+LD  R RR F+RI GS L  LL
Sbjct  179  RVAVDALTAGAPPGAQNGERTLTAGNLEVAMLDRKRSRRLFKRIVGSQLDGLL  231


>gi|72162190|ref|YP_289847.1| 20S proteasome alpha-subunit [Thermobifida fusca YX]
 gi|123629304|sp|Q47NZ5.1|PSA_THEFY RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome 
alpha subunit; AltName: Full=Proteasome core protein 
PrcA
 gi|71915922|gb|AAZ55824.1| putative 20S proteasome alpha-subunit [Thermobifida fusca YX]
Length=249

 Score =  265 bits (677),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 128/234 (55%), Positives = 170/234 (73%), Gaps = 7/234 (2%)

Query  1    VSFPYFISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYDRV  60
            +S P+++SPEQ M+++++ ARKGIAR +S V L Y GG+LFVA+N SR+L KISELYDRV
Sbjct  1    MSMPFYVSPEQIMKDKADYARKGIARGRSAVVLQYEGGILFVADNVSRTLHKISELYDRV  60

Query  61   GFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPYEV  120
             FAA G++NEF+NLR  G++FAD  GY YDR DVTG+ LAN YAQTLG +FTE +KP+EV
Sbjct  61   AFAAVGRYNEFENLRLAGVRFADMHGYTYDRSDVTGQMLANAYAQTLGAVFTESSKPWEV  120

Query  121  ELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLTDA  180
            E+ VAEV    ++   ++YRIT+DGS+ DE  F+ MGG+ E +  AL+E Y +N SLTDA
Sbjct  121  EIVVAEVGDSPDS--DQIYRITFDGSVVDERDFLAMGGSAERVTAALRERYVKNMSLTDA  178

Query  181  LRIAVAALRAGSADTSGGDQPTLGVASLEVAVLDANRPRRAFRRITGSALQALL  234
            LR+AV  L         G++  L  +SLEVA+L+ +RP R FRRI G  L  +L
Sbjct  179  LRVAVHGLA-----HENGERRELKASSLEVAMLERSRPHRKFRRIQGERLARML  227


>gi|312197565|ref|YP_004017626.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
 gi|311228901|gb|ADP81756.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
Length=246

 Score =  263 bits (673),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 135/243 (56%), Positives = 173/243 (72%), Gaps = 9/243 (3%)

Query  1    VSFPY--FISPEQAMRERSELARKGIARAKSVVALAYAGGVLFVAENPSRSLQKISELYD  58
            ++ P+  + SPEQ +R++SE ARKGIAR +SVV + Y+ G+LFVAENPS +L KISE+YD
Sbjct  1    MTMPFGGYASPEQWVRDKSEYARKGIARGRSVVIVTYSDGILFVAENPSVTLHKISEVYD  60

Query  59   RVGFAAAGKFNEFDNLRRGGIQFADTRGYAYDRRDVTGRQLANVYAQTLGTIFTEQAKPY  118
            R+ FAA GK+NEF+NLR  GI+  D +GY YDRRDVTGR LAN YAQTLGTIFTE  KPY
Sbjct  61   RIAFAAVGKYNEFENLRTAGIRLTDMKGYTYDRRDVTGRALANAYAQTLGTIFTESIKPY  120

Query  119  EVELCVAEVAHYGETKRPELYRITYDGSIADEPHFVVMGGTTEPIANALKESYAENASLT  178
            EVE+ VAEV    E+   ++YR+TYDGSIADE  FV +GG +E +  +L+E +     L 
Sbjct  121  EVEIVVAEVGSTPESD--QIYRLTYDGSIADERGFVAIGGQSEQVNASLREHHTAGEPLA  178

Query  179  DALRIAVAALRAGSADTSGG-----DQPTLGVASLEVAVLDANRPRRAFRRITGSALQAL  233
             ALR+AV AL AG+   + G      +  L   +LEVAVLD NRPRR F+R+TG  L+ L
Sbjct  179  QALRVAVRALGAGTQPGAPGAAAQNGERVLSAGNLEVAVLDRNRPRRQFKRVTGPQLEGL  238

Query  234  LVD  236
            L +
Sbjct  239  LAE  241



Lambda     K      H
   0.316    0.132    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 352647919680


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40