BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2113
Length=397
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609250|ref|NP_216629.1| integral membrane protein [Mycobact... 784 0.0
gi|121637995|ref|YP_978219.1| putative integral membrane protein... 780 0.0
gi|339632146|ref|YP_004723788.1| hypothetical protein MAF_21250 ... 780 0.0
gi|31793293|ref|NP_855786.1| integral membrane protein [Mycobact... 779 0.0
gi|340627122|ref|YP_004745574.1| putative integral membrane prot... 776 0.0
gi|308403676|ref|ZP_07669430.1| membrane protein [Mycobacterium ... 754 0.0
gi|306797968|ref|ZP_07436270.1| hypothetical protein TMFG_01072 ... 751 0.0
gi|298525609|ref|ZP_07013018.1| integral membrane protein [Mycob... 739 0.0
gi|308232036|ref|ZP_07663978.1| membrane protein [Mycobacterium ... 689 0.0
gi|289762275|ref|ZP_06521653.1| conserved hypothetical protein [... 666 0.0
gi|289570226|ref|ZP_06450453.1| membrane protein [Mycobacterium ... 578 7e-163
gi|296165185|ref|ZP_06847732.1| integral membrane protein [Mycob... 457 2e-126
gi|183983088|ref|YP_001851379.1| integral membrane protein [Myco... 427 1e-117
gi|342859806|ref|ZP_08716459.1| integral membrane protein [Mycob... 393 2e-107
gi|240171387|ref|ZP_04750046.1| integral membrane protein [Mycob... 377 2e-102
gi|118617845|ref|YP_906177.1| integral membrane protein [Mycobac... 318 1e-84
gi|120404424|ref|YP_954253.1| hypothetical protein Mvan_3452 [My... 293 4e-77
gi|315443987|ref|YP_004076866.1| hypothetical protein Mspyr1_238... 276 6e-72
gi|145223661|ref|YP_001134339.1| hypothetical protein Mflv_3074 ... 274 1e-71
gi|300784834|ref|YP_003765125.1| hypothetical protein AMED_2929 ... 130 3e-28
gi|120404426|ref|YP_954255.1| hypothetical protein Mvan_3454 [My... 120 3e-25
gi|315443985|ref|YP_004076864.1| hypothetical protein Mspyr1_238... 119 7e-25
gi|145223659|ref|YP_001134337.1| hypothetical protein Mflv_3072 ... 118 2e-24
gi|256393640|ref|YP_003115204.1| hypothetical protein Caci_4500 ... 88.6 2e-15
gi|238059981|ref|ZP_04604690.1| hypothetical protein MCAG_00947 ... 81.3 3e-13
gi|163841095|ref|YP_001625500.1| hypothetical protein RSal33209_... 79.0 1e-12
gi|284047182|ref|YP_003397522.1| hypothetical protein Cwoe_5746 ... 74.7 3e-11
gi|319947730|ref|ZP_08021937.1| hypothetical protein ES5_00435 [... 65.1 2e-08
gi|256396988|ref|YP_003118552.1| hypothetical protein Caci_7888 ... 64.7 3e-08
gi|283458970|ref|YP_003363618.1| D-mannonate dehydratase [Rothia... 54.3 4e-05
gi|326333605|ref|ZP_08199844.1| hypothetical protein NBCG_05040 ... 53.5 6e-05
gi|119717410|ref|YP_924375.1| hypothetical protein Noca_3186 [No... 52.0 2e-04
gi|284033787|ref|YP_003383718.1| hypothetical protein Kfla_5915 ... 50.1 6e-04
gi|255326556|ref|ZP_05367637.1| conserved hypothetical protein [... 48.9 0.002
gi|46204404|ref|ZP_00050048.2| hypothetical protein Magn03003744... 43.5 0.064
gi|255599143|ref|XP_002537162.1| efflux pump antibiotic resistan... 36.6 8.3
gi|291454334|ref|ZP_06593724.1| alpha-ketoglutarate transporter ... 36.2 10.0
>gi|15609250|ref|NP_216629.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15841605|ref|NP_336642.1| hypothetical protein MT2173 [Mycobacterium tuberculosis CDC1551]
gi|148661928|ref|YP_001283451.1| putative integral membrane protein [Mycobacterium tuberculosis
H37Ra]
43 more sequence titles
Length=397
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/397 (100%), Positives = 397/397 (100%), Gaps = 0/397 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM
Sbjct 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA
Sbjct 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP
Sbjct 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP
Sbjct 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI
Sbjct 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF
Sbjct 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
Query 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
>gi|121637995|ref|YP_978219.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990489|ref|YP_002645176.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121493643|emb|CAL72118.1| Probable integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773602|dbj|BAH26408.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602033|emb|CCC64707.1| probable integral membrane protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=397
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/397 (99%), Positives = 396/397 (99%), Gaps = 0/397 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM
Sbjct 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA
Sbjct 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP
Sbjct 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
IVLLTALVFFNTYVWLMAANINGERL LAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP
Sbjct 181 IVLLTALVFFNTYVWLMAANINGERLPLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI
Sbjct 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF
Sbjct 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
Query 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
>gi|339632146|ref|YP_004723788.1| hypothetical protein MAF_21250 [Mycobacterium africanum GM041182]
gi|339331502|emb|CCC27195.1| putative integral membrane protein [Mycobacterium africanum GM041182]
Length=397
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/397 (99%), Positives = 396/397 (99%), Gaps = 0/397 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM
Sbjct 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISS RGQAAVATMAVA
Sbjct 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSRRGQAAVATMAVA 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP
Sbjct 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP
Sbjct 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI
Sbjct 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF
Sbjct 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
Query 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
>gi|31793293|ref|NP_855786.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|31618885|emb|CAD96990.1| Probable integral membrane protein [Mycobacterium bovis AF2122/97]
Length=397
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/397 (99%), Positives = 395/397 (99%), Gaps = 0/397 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM
Sbjct 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA
Sbjct 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP
Sbjct 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
IVLLTALVFFNTYVWLMAANINGERL LAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP
Sbjct 181 IVLLTALVFFNTYVWLMAANINGERLPLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAA QLVEILVVASVGAAIYLVLGMI
Sbjct 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAALQLVEILVVASVGAAIYLVLGMI 300
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF
Sbjct 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
Query 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
>gi|340627122|ref|YP_004745574.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|340005312|emb|CCC44469.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
Length=397
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/397 (99%), Positives = 394/397 (99%), Gaps = 0/397 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM
Sbjct 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AVFFVTDGGEVFIS TPTTAQWVILALL VALPLASLVGWLVSQ+SSGRGQAAVATMAVA
Sbjct 61 AVFFVTDGGEVFISTTPTTAQWVILALLTVALPLASLVGWLVSQMSSGRGQAAVATMAVA 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP
Sbjct 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP
Sbjct 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVA VGAAIYLVLGMI
Sbjct 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVAFVGAAIYLVLGMI 300
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF
Sbjct 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
Query 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
>gi|308403676|ref|ZP_07669430.1| membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308365664|gb|EFP54515.1| membrane protein [Mycobacterium tuberculosis SUMu012]
gi|339295033|gb|AEJ47144.1| hypothetical protein CCDC5079_1954 [Mycobacterium tuberculosis
CCDC5079]
gi|339298655|gb|AEJ50765.1| hypothetical protein CCDC5180_1928 [Mycobacterium tuberculosis
CCDC5180]
Length=381
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/381 (99%), Positives = 381/381 (100%), Gaps = 0/381 (0%)
Query 17 VEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISAT 76
+EAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISAT
Sbjct 1 MEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISAT 60
Query 77 PTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLL 136
PTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLL
Sbjct 61 PTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLL 120
Query 137 RTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL 196
RTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL
Sbjct 121 RTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL 180
Query 197 MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGD 256
MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGD
Sbjct 181 MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGD 240
Query 257 PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSM 316
PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSM
Sbjct 241 PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSM 300
Query 317 TTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARN 376
TTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARN
Sbjct 301 TTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARN 360
Query 377 RYRNNVVTAPCAGVDAGHVDD 397
RYRNNVVTAPCAGVDAGHVDD
Sbjct 361 RYRNNVVTAPCAGVDAGHVDD 381
>gi|306797968|ref|ZP_07436270.1| hypothetical protein TMFG_01072 [Mycobacterium tuberculosis SUMu006]
gi|308341721|gb|EFP30572.1| hypothetical protein TMFG_01072 [Mycobacterium tuberculosis SUMu006]
Length=423
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/381 (99%), Positives = 381/381 (100%), Gaps = 0/381 (0%)
Query 17 VEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISAT 76
+EAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISAT
Sbjct 1 MEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISAT 60
Query 77 PTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLL 136
PTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLL
Sbjct 61 PTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLL 120
Query 137 RTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL 196
RTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL
Sbjct 121 RTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL 180
Query 197 MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGD 256
MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGD
Sbjct 181 MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGD 240
Query 257 PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSM 316
PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSM
Sbjct 241 PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSM 300
Query 317 TTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARN 376
TTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARN
Sbjct 301 TTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARN 360
Query 377 RYRNNVVTAPCAGVDAGHVDD 397
RYRNNVVTAPCAGVDAGHVDD
Sbjct 361 RYRNNVVTAPCAGVDAGHVDD 381
>gi|298525609|ref|ZP_07013018.1| integral membrane protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495403|gb|EFI30697.1| integral membrane protein [Mycobacterium tuberculosis 94_M4241A]
Length=374
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/374 (99%), Positives = 374/374 (100%), Gaps = 0/374 (0%)
Query 24 LKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWV 83
+KRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWV
Sbjct 1 MKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWV 60
Query 84 ILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVG 143
ILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVG
Sbjct 61 ILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVG 120
Query 144 LVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWLMAANING 203
LVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWLMAANING
Sbjct 121 LVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWLMAANING 180
Query 204 ERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPL 263
ERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPL
Sbjct 181 ERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPL 240
Query 264 TRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGM 323
TRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGM
Sbjct 241 TRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGM 300
Query 324 TFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVV 383
TFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVV
Sbjct 301 TFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVV 360
Query 384 TAPCAGVDAGHVDD 397
TAPCAGVDAGHVDD
Sbjct 361 TAPCAGVDAGHVDD 374
>gi|308232036|ref|ZP_07663978.1| membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308369623|ref|ZP_07666761.1| membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308370916|ref|ZP_07667043.1| membrane protein [Mycobacterium tuberculosis SUMu003]
11 more sequence titles
Length=350
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/350 (100%), Positives = 350/350 (100%), Gaps = 0/350 (0%)
Query 48 MLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISS 107
MLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISS
Sbjct 1 MLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISS 60
Query 108 GRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEH 167
GRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEH
Sbjct 61 GRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEH 120
Query 168 LATVGTLAVRALPIVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVE 227
LATVGTLAVRALPIVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVE
Sbjct 121 LATVGTLAVRALPIVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVE 180
Query 228 RVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVA 287
RVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVA
Sbjct 181 RVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVA 240
Query 288 SVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYIS 347
SVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYIS
Sbjct 241 SVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYIS 300
Query 348 ARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
ARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 301 ARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 350
>gi|289762275|ref|ZP_06521653.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709781|gb|EFD73797.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=338
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%)
Query 60 MAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAV 119
MAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAV
Sbjct 1 MAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAV 60
Query 120 AFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRAL 179
AFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRAL
Sbjct 61 AFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRAL 120
Query 180 PIVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVM 239
PIVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVM
Sbjct 121 PIVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVM 180
Query 240 PQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGM 299
PQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGM
Sbjct 181 PQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGM 240
Query 300 IILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAM 359
IILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAM
Sbjct 241 IILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAM 300
Query 360 FLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
FLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD
Sbjct 301 FLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 338
>gi|289570226|ref|ZP_06450453.1| membrane protein [Mycobacterium tuberculosis T17]
gi|289543980|gb|EFD47628.1| membrane protein [Mycobacterium tuberculosis T17]
Length=391
Score = 578 bits (1489), Expect = 7e-163, Method: Compositional matrix adjust.
Identities = 302/302 (100%), Positives = 302/302 (100%), Gaps = 0/302 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM
Sbjct 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA
Sbjct 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP
Sbjct 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP
Sbjct 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI
Sbjct 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
Query 301 IL 302
IL
Sbjct 301 IL 302
>gi|296165185|ref|ZP_06847732.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899374|gb|EFG78833.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=392
Score = 457 bits (1175), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 243/389 (63%), Positives = 289/389 (75%), Gaps = 1/389 (0%)
Query 9 PAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDG 68
P R A AESWFL+RGLPSVLT RGR RRLWPRSAPMLAA+A ++ C++ ++ +T G
Sbjct 5 PRRRGAESGAAESWFLQRGLPSVLTRRGRWRRLWPRSAPMLAAYATLQACILPIYLITGG 64
Query 69 GEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVI 128
+V I+ TPT ++ V+LA++ ++LPL LVGWLVS+ +GR +AA+AT++V A ++
Sbjct 65 HDVEITGTPTGSELVVLAIVGLSLPLMVLVGWLVSRSRNGRTRAAIATVSVLVVACVSMM 124
Query 129 ESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALV 188
+ QL + A VV +VL+ TG GVGSV+GWAVRM L H A VG LAVRALP+VLLTALV
Sbjct 125 TADVAQLPQQAAVVAVVLILTGLGVGSVVGWAVRMMLSHFAMVGALAVRALPVVLLTALV 184
Query 189 FFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAG 248
FFNTYVWLMAA I+G RL LAM FL++IA AFVVS TVERVRP+LRST P + LAG
Sbjct 185 FFNTYVWLMAATISGNRLGLAMAFLVSIAAAFVVSATVERVRPMLRSTAAPPGETDHLAG 244
Query 249 TPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLR 308
TPFA M D PL RAERLNVVF+LAASQL +ILVV V AAIYLVLG+I+L+P LL
Sbjct 245 TPFAAMPDAPECAPLRRAERLNVVFVLAASQLAQILVVTVVTAAIYLVLGLIVLSPDLLN 304
Query 309 EWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDL 368
EWTH T TVLG T P PDSL+ M LFLGALTFMYISARA DAEYR+ FLDPLI DL
Sbjct 305 EWTHTYKSTATVLGFTLPVPDSLVHMSLFLGALTFMYISARAAGDAEYRSTFLDPLIGDL 364
Query 369 HTALLARNRYRNNVVTAPCAGVDAGHVDD 397
H L+ARNRYR V +P A VD D
Sbjct 365 HATLIARNRYRGAVAPSPPA-VDGTDGSD 392
>gi|183983088|ref|YP_001851379.1| integral membrane protein [Mycobacterium marinum M]
gi|183176414|gb|ACC41524.1| integral membrane protein [Mycobacterium marinum M]
Length=394
Score = 427 bits (1099), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 216/382 (57%), Positives = 278/382 (73%), Gaps = 0/382 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
M+ S R PA R + AESWFL+RGLP+VLT R R RRLW RSAP+LAA+A + +
Sbjct 1 MNPSPHRAPARRDPSSAAAESWFLERGLPAVLTRRARWRRLWSRSAPVLAAYATLHCWTL 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
+ +T G EV I PT +WV++ L+A+A L + VGWLVS++S R ++ AT+AV+
Sbjct 61 PILLITHGDEVVIDGQPTPREWVLVTLVAIAPVLITFVGWLVSRLSDSRMRSVAATVAVS 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
A ++E+ L A+ +VLL TG G+GSV GW+VRMTL HLAT+G LAVRALP
Sbjct 121 LVAIVLIVETSVSHLPDAALAAVMVLLLTGSGIGSVTGWSVRMTLSHLATIGALAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
+VLLT LVFFN+ +WLMA+ I+ ERL LA+ FL+ IA FV+S T ERV+P+L++ TV P
Sbjct 181 VVLLTTLVFFNSNIWLMASTISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQP 240
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
+ Q LA TPFA M DP PLTRAER NVVF+L A QLV+I+VVA + A IY++LG+I
Sbjct 241 KNCQELADTPFAAMPDPPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVILGLI 300
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
+L+P LL+EW+H S TVLG+T P PDSLI +CLF+GALTFMYISARAV DAEYRA F
Sbjct 301 VLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHLCLFIGALTFMYISARAVGDAEYRATF 360
Query 361 LDPLIDDLHTALLARNRYRNNV 382
+DPLI++LH L+AR RYR N+
Sbjct 361 VDPLIENLHITLIARGRYRANI 382
>gi|342859806|ref|ZP_08716459.1| integral membrane protein [Mycobacterium colombiense CECT 3035]
gi|342132938|gb|EGT86158.1| integral membrane protein [Mycobacterium colombiense CECT 3035]
Length=393
Score = 393 bits (1010), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 236/397 (60%), Positives = 281/397 (71%), Gaps = 4/397 (1%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
M L R P+ RA AESWFL+RGLPSVLT R R RRLW RSAP+LAA+A ++ C++
Sbjct 1 MELLRGRAPSRRAEPSAAAESWFLERGLPSVLTRRARWRRLWTRSAPILAAYAALQACIL 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
AV+ +T G +V IS PTT++ V+LALLA+ALPL ++VGWL S+ S + A AT A
Sbjct 61 AVYLITGGHDVEISGEPTTSELVVLALLALALPLMAVVGWLASRSRSRATRTATATTAAL 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
A S ++ G + V L+L TG G+GSV+GWAVRM L HLATVG LAVRALP
Sbjct 121 AVACSGIV-MGDVVQEAVVVAAVLIL--TGSGIGSVVGWAVRMMLSHLATVGALAVRALP 177
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
+VLLTALVFFNTYVWLMAA I+G RL LAM FL+ IA AFV S T ERVRP+L+S TV
Sbjct 178 VVLLTALVFFNTYVWLMAATISGNRLALAMAFLVTIAAAFVSSATRERVRPMLQSATVPH 237
Query 241 QGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMI 300
+ LAGTPFAT+ + G PLT++ERLNVVF+L SQL +I+VVA V AAIYLVLG+I
Sbjct 238 DEPEKLAGTPFATLPGATGGAPLTKSERLNVVFVLVVSQLAQIIVVAVVTAAIYLVLGLI 297
Query 301 ILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMF 360
+L+P LL EWTH + TVLG T P PDSLI M LFLGALTFMY+SARA DAEYR+ F
Sbjct 298 VLSPELLNEWTHTFKSSATVLGFTLPVPDSLIHMTLFLGALTFMYLSARAAGDAEYRSTF 357
Query 361 LDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
LDPLIDDL T L ARNRY + A VD D
Sbjct 358 LDPLIDDLDTTLAARNRY-HGAAGAAVRRVDGADTSD 393
>gi|240171387|ref|ZP_04750046.1| integral membrane protein [Mycobacterium kansasii ATCC 12478]
Length=396
Score = 377 bits (969), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 230/398 (58%), Positives = 281/398 (71%), Gaps = 3/398 (0%)
Query 1 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM 60
M LS RR PA A A AESWFL+ GLPSVLT R R RRLW RSAP LAA+A
Sbjct 1 MKLSPRRMPAGLAPATAAAESWFLQHGLPSVLTKRSRWRRLWSRSAPALAAYAAFHCWTF 60
Query 61 AVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA 120
+F +T+G +V I PT WV+L ++A+A L +GWLVS++S GR +A AT+AV+
Sbjct 61 PLFLITNGEDVNIGENPTPRDWVVLTIVALAPVLIVGIGWLVSRMSDGRKRAIAATVAVS 120
Query 121 FAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALP 180
V+E+ P L + LVLL T GVGSV+GWAVR+T+ +AT+G LAVRALP
Sbjct 121 MVGIVIVVETDPSHLPGAVIFTALVLLLTASGVGSVVGWAVRITVSQVATIGALAVRALP 180
Query 181 IVLLTALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMP 240
+VLLT LVFFN VWLMAA I ERL LA+ FLL+IA AFVVS T ERVRP+L+S +P
Sbjct 181 VVLLTTLVFFNGNVWLMAATIGAERLGLAIAFLLSIAAAFVVSATRERVRPMLQSAAALP 240
Query 241 QGSQSLAGTPFATMGDPSPGFP-LTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGM 299
+ + LA TPFA + D SPG P LTRAER+N+VF+LA SQLV+I+VVA + A IY++LG+
Sbjct 241 RDCERLAHTPFAMLPD-SPGSPPLTRAERVNMVFVLAVSQLVQIMVVALLTAVIYVMLGL 299
Query 300 IILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAM 359
I+L+ LL EWT ++TVLG+TFP PDSLI MCLFLGALTFMYISARAVDDAEYR
Sbjct 300 IVLSSALLDEWTRGAPSSSTVLGLTFPVPDSLIHMCLFLGALTFMYISARAVDDAEYRTT 359
Query 360 FLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVDD 397
F+DPLIDDLH L+ARNRY + +T VDA D
Sbjct 360 FVDPLIDDLHATLIARNRYHAS-ITGYSPRVDAADHSD 396
>gi|118617845|ref|YP_906177.1| integral membrane protein [Mycobacterium ulcerans Agy99]
gi|118569955|gb|ABL04706.1| integral membrane protein [Mycobacterium ulcerans Agy99]
Length=322
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/288 (58%), Positives = 209/288 (73%), Gaps = 4/288 (1%)
Query 99 GWLVSQISSGRG--QAA--VATMAVAFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVG 154
G LVS RG QA AT+AV+ A ++E+ L A+ +VLL TG G+G
Sbjct 23 GKLVSGTGLARGADQAGPLAATVAVSLVAIVLIVETSVSHLPDAALAAVMVLLLTGSGIG 82
Query 155 SVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWLMAANINGERLTLAMVFLL 214
SV GW+VRMTL HLAT+G LAVRALP+VLLT LVFFN+ +WLMA+ I+ ERL LA+ FL+
Sbjct 83 SVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWLMASTISAERLALAIAFLV 142
Query 215 AIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFL 274
IA FV+S T ERV+P+L++ TV P+ Q LA TPFA M DP PLTRAER NVVF+
Sbjct 143 GIASVFVISTTAERVKPMLQAPTVQPKNCQELADTPFAAMPDPPSSRPLTRAERANVVFV 202
Query 275 LAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRM 334
L A QLV+I+VVA + A IY++L +I+L+P LL+EW+H S TVLG+T P PDSLI +
Sbjct 203 LTAHQLVQIMVVAMLTATIYVILELIVLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHL 262
Query 335 CLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNV 382
CLF+GALTFMYISARAV DAEYRA F+DPLI++LH L+A RY N+
Sbjct 263 CLFIGALTFMYISARAVGDAEYRATFVDPLIENLHITLIAPGRYGANI 310
>gi|120404424|ref|YP_954253.1| hypothetical protein Mvan_3452 [Mycobacterium vanbaalenii PYR-1]
gi|119957242|gb|ABM14247.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=381
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 174/367 (48%), Positives = 238/367 (65%), Gaps = 6/367 (1%)
Query 19 AESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPT 78
AE WFL+RGLP+VL +R+W RSAP LAA AV+ V VT + I TPT
Sbjct 11 AERWFLQRGLPAVLRPGVLVQRVWTRSAPALAALAVMMAFSTLVVAVTGEHTIAIDGTPT 70
Query 79 TAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGP-----I 133
+W I+ ++ V LP A+LVGWLVS+ R + AV+T ++A AA I +GP +
Sbjct 71 RTEWFIIGVVLVVLPTAALVGWLVSRTDDLRLRGAVSTTSLAVAALGG-IYAGPSAHVFV 129
Query 134 QLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTY 193
++ V++ L+ + T GVG++LGWAVRMTL +LA+VG L + ALP++LLT LVFFN
Sbjct 130 DMVTEIVLIVLIFVCTATGVGAILGWAVRMTLANLASVGNLLLGALPVMLLTVLVFFNGP 189
Query 194 VWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFAT 253
VW MA+ I RL +A++FL+ IA F+VS T+ V P+L P+ + L GTPF T
Sbjct 190 VWTMASTITRPRLWVALLFLMLIAVTFLVSSTLSLVGPILSPDAKRPEDAAQLDGTPFET 249
Query 254 MGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHY 313
M D L++AERLNVVF+LA SQ+V++L V+ V ++ VLG+I+++P LL T+
Sbjct 250 MPDRPRRVKLSKAERLNVVFVLAMSQVVQVLTVSIVTGLLFFVLGLILISPELLAALTNG 309
Query 314 DSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALL 373
S LGMT P P +LI + +FL ALTFMY++AR V D +YRA FLDPLI+DL L+
Sbjct 310 GSSDGEFLGMTLPVPQALIHITMFLTALTFMYLAARTVGDKDYRAQFLDPLIEDLRFTLV 369
Query 374 ARNRYRN 380
AR+RYR
Sbjct 370 ARDRYRT 376
>gi|315443987|ref|YP_004076866.1| hypothetical protein Mspyr1_23890 [Mycobacterium sp. Spyr1]
gi|315262290|gb|ADT99031.1| hypothetical protein Mspyr1_23890 [Mycobacterium sp. Spyr1]
Length=388
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 174/373 (47%), Positives = 232/373 (63%), Gaps = 6/373 (1%)
Query 19 AESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPT 78
AE WFL RGLP+VL +R+W RSAP LAA AV + V VT + I TPT
Sbjct 11 AERWFLDRGLPAVLRPGVLVQRVWTRSAPALAALAVAMAFSILVVGVTGKHTIDIDGTPT 70
Query 79 TAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGP-----I 133
+W +L ++ V LP A+ VGWLVS+ R +A V+T +V + GP
Sbjct 71 RTEWFVLGVVVVVLPTAAFVGWLVSRSDDVRLRAVVSTASVGVGILG-ALYGGPSPRVWA 129
Query 134 QLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTY 193
L+ AV+V L+LL T G G++LGWAVRM L +LA+VG L +RALP++LLT LVFFN
Sbjct 130 DLVAEAVIVALILLGTASGGGAILGWAVRMMLGNLASVGNLLLRALPVMLLTVLVFFNGP 189
Query 194 VWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFAT 253
VW MAA ++ RL A+VFL+ IA +F++S + VRP+L Q + +L GTPF T
Sbjct 190 VWTMAATVHRPRLWFALVFLMTIAVSFLLSTMMAGVRPILLPDAKAEQDAAALRGTPFET 249
Query 254 MGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHY 313
M D L+R+ERLNV F+LA SQ+V++L V+ V ++ G+I+++P LL T
Sbjct 250 MPDRPRRVDLSRSERLNVGFVLALSQIVQVLTVSIVTGLLFFAFGLILISPELLAALTAN 309
Query 314 DSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALL 373
S LGMT P PD+LI++ +FL ALTFMY++ARAV D EYR FLDPLI+DL L+
Sbjct 310 GSPDGRFLGMTLPVPDALIQVSMFLTALTFMYLAARAVADKEYRTQFLDPLIEDLRVTLV 369
Query 374 ARNRYRNNVVTAP 386
AR+RYR P
Sbjct 370 ARDRYRTVTADPP 382
>gi|145223661|ref|YP_001134339.1| hypothetical protein Mflv_3074 [Mycobacterium gilvum PYR-GCK]
gi|145216147|gb|ABP45551.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=388
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/373 (47%), Positives = 232/373 (63%), Gaps = 6/373 (1%)
Query 19 AESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPT 78
AE WFL RGLP+VL +R+W RSAP LAA AV + V VT + I TPT
Sbjct 11 AERWFLDRGLPAVLRPGVLVQRVWTRSAPALAALAVAMAFSILVVGVTGKHTIDIDGTPT 70
Query 79 TAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESGP-----I 133
+W +L ++ V LP A+ VGWLVS+ R +A V+T +V + GP
Sbjct 71 RTEWFVLGVVVVVLPTAAFVGWLVSRSDDVRLRAVVSTASVGVGILG-ALYGGPSPRVWA 129
Query 134 QLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTY 193
L+ AV+V L+LL T G G++LGWAVRM L +LA+VG L +RALP++LLT LVFFN
Sbjct 130 DLVAEAVIVALILLGTASGGGAILGWAVRMMLGNLASVGNLLLRALPVMLLTVLVFFNGP 189
Query 194 VWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFAT 253
VW MAA ++ RL A+VFL+ IA +F++S + VRP+L Q + +L GTPF T
Sbjct 190 VWTMAATVHRPRLWFALVFLMTIAVSFLLSTMMAGVRPILLPDAKAEQDAAALRGTPFET 249
Query 254 MGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHY 313
M D L+R+ERLNV F+LA SQ+V++L V+ V ++ G+I+++P LL T
Sbjct 250 MPDRPRRVDLSRSERLNVGFVLALSQIVQVLTVSIVTGLLFFAFGLILISPELLAALTAN 309
Query 314 DSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALL 373
S LGMT P PD+LI++ +FL ALTFMY++ARAV D EYR FLDPLI+DL L+
Sbjct 310 GSPDGWFLGMTLPVPDALIQVSMFLTALTFMYLAARAVADKEYRTQFLDPLIEDLRVTLV 369
Query 374 ARNRYRNNVVTAP 386
AR+RYR P
Sbjct 370 ARDRYRTVTADPP 382
>gi|300784834|ref|YP_003765125.1| hypothetical protein AMED_2929 [Amycolatopsis mediterranei U32]
gi|299794348|gb|ADJ44723.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340526261|gb|AEK41466.1| hypothetical protein RAM_14890 [Amycolatopsis mediterranei S699]
Length=397
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/397 (32%), Positives = 197/397 (50%), Gaps = 28/397 (7%)
Query 17 VEA-ESWFLKRGLPSVLTMRGRCRRLWPRSAP---MLAAWAVVEGCLMAVFFVTDGG-EV 71
VEA E WF +RGLP+V +RGR L R AP +A W V+ L AV TD +
Sbjct 7 VEAVEQWFRRRGLPAV--VRGRPAHLLVRIAPAVVFIAGWRVLTAVLSAVDGETDADFDR 64
Query 72 FISATPTTAQWVILALLAVALPLASLVGWL---------VSQISSGRGQAAVATMAVAFA 122
+ + + L L V +P L WL V + +G A V
Sbjct 65 LMDSDLFALGYSGLLLSLVVVP--GLSSWLTARWVRRKLVERGGTGPAAVMAAAFVVVVP 122
Query 123 AASDVIE-SGPIQ--LLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRAL 179
V++ P+ L++ A++ GL GVGS++GWA+R +G L RAL
Sbjct 123 VVDLVVDGDSPVLGLLMQVAILTGL-FAAAFAGVGSIVGWALRAAYRQARLLGELTSRAL 181
Query 180 PIVLL-TALVFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTV 238
P++LL T FF T +W + A + R+ L L +A F+++ + V L +S T
Sbjct 182 PLLLLFTVFGFFTTEIWQVGAALPRPRMWLVAGLLAVVAVVFLLAMLKDEVTLLTQSRTA 241
Query 239 MPQGSQSLAGTPFAT-MGD--PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYL 295
P G L TP A + D P+ PLT+ ER N+V +L +Q+++ V+A++ ++
Sbjct 242 -PVGLDKLGETPLAAFLADDVPAERLPLTKLERANMVLVLVLTQVLQTFVLATLVFVFFV 300
Query 296 VLGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAE 355
V G++ + +++ W D + T+ G+ P P L+++ LF+ A + +Y +A V DA
Sbjct 301 VFGIVAVQHAVIKAWIGRDPTSGTLFGIQLPVPQELLQVSLFIAAFSGLYFAASTVTDAN 360
Query 356 YRAMFLDPLIDDLHTALLARNRYRNNVVT-APCAGVD 391
YR+ F DPL D L +L+AR+ Y ++ AP A D
Sbjct 361 YRSAFFDPLADHLAVSLVARDLYLGRLLEVAPHAADD 397
>gi|120404426|ref|YP_954255.1| hypothetical protein Mvan_3454 [Mycobacterium vanbaalenii PYR-1]
gi|119957244|gb|ABM14249.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=384
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/377 (30%), Positives = 182/377 (49%), Gaps = 26/377 (6%)
Query 20 ESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTT 79
WFL RGLP VLT R R R+L RSAPM++A + M + VT GE +P
Sbjct 5 HDWFLHRGLPLVLTRRVRARKLVQRSAPMVSAVGALTAVTMLLADVT--GE-----SPDY 57
Query 80 AQWVILALLAVALPLASLVGWLVSQISSGRGQA-----AVATMAVAFAAASDVIESG--- 131
V L +AV L A V ++ ++ + G+A AV M + F + SG
Sbjct 58 GYAVRLGGIAVVLVAAPFVLEVLHRLGTRVGEALRRWAAVLVMTI-FVVVMPLTVSGWSG 116
Query 132 -PIQLLRTAVVVGLVLLQ-TGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVF 189
+++ L + T G GS+ WA R L +GTL RALP+++LT +V+
Sbjct 117 AAAAEAPAFILISLTAIWLTYLGFGSIALWAFRFAWVQLGALGTLMSRALPLLMLTVVVY 176
Query 190 FNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGT 249
F +W ++A + ERL + FL +A F+++ + V L + + + L GT
Sbjct 177 FTGELWQLSARMTRERLWQTIGFLSIVALVFMIATIRDEVGALRQDRSAREDPAALLVGT 236
Query 250 PFATM-GDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLR 308
P ++ DP+ PL+ AE+ NVV ++ +Q +++++ + A +L LG+I + +
Sbjct 237 PLESVRADPATRTPLSMAEQANVVAVMVVAQAIQVVLFTAGLFAFFLALGVIAIPDDVTV 296
Query 309 EWTHYDSMTT-------TVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFL 361
W+ + T G+ P P +++ LF+ L+ +Y + D YR F
Sbjct 297 VWSGEQACAVGEPPCAGTWFGVHIPIPQTVVHTSLFVAVLSGLYFTVSTSVDPLYRQRFF 356
Query 362 DPLIDDLHTALLARNRY 378
DPLI D+ +L R+ Y
Sbjct 357 DPLIADVAVSLAGRDAY 373
>gi|315443985|ref|YP_004076864.1| hypothetical protein Mspyr1_23870 [Mycobacterium sp. Spyr1]
gi|315262288|gb|ADT99029.1| hypothetical protein Mspyr1_23870 [Mycobacterium sp. Spyr1]
Length=391
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/378 (30%), Positives = 184/378 (49%), Gaps = 25/378 (6%)
Query 20 ESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTT 79
WFL+RGLP VL R R R+L RSAPM++A + M + VT + A
Sbjct 11 HDWFLQRGLPLVLPRRVRARKLVQRSAPMVSAVGALTAVTMLLADVTGSDPDYGYAVRLG 70
Query 80 AQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESG-------- 131
A VIL AL + +G + + + R AAV M + F + SG
Sbjct 71 AIAVILIAAPFALEILHRLGTRMGE--ALRRWAAVLVMTI-FVVIMPLTVSGWSGTAAAE 127
Query 132 -PIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFF 190
P+ ++ + + V L L G GS+ WA R + +GTL RALP+++LT +V+F
Sbjct 128 APVFIVISLLAVWLTYL----GFGSIALWAFRFAWVQVGALGTLMSRALPLLMLTVVVYF 183
Query 191 NTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQS-LAGT 249
+W ++A ++ ERL + FL +A F+V+ + VR L + + + + L T
Sbjct 184 TGELWQLSARMSRERLWQTIGFLSLVALLFMVATIRDEVRALRQERSERDDDATALLEDT 243
Query 250 PFATMG-DPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLR 308
P A++ P+ PL+ AE+ NVV ++ +Q +++++ + +L LGMI + +
Sbjct 244 PLASIHTGPAARTPLSLAEQANVVAVMVVAQAIQVVLFTAGLFVFFLALGMIAIPDDVTV 303
Query 309 EWTHYDSMTT-------TVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFL 361
W+ + T G+ P P +++ M LF+ L+ +Y + D YR F
Sbjct 304 LWSSEQTCAVGEPPCAGTWFGVHIPIPQTVVHMSLFVAVLSGLYFTVSTSVDPLYRERFF 363
Query 362 DPLIDDLHTALLARNRYR 379
+PLI D+ +L R+ YR
Sbjct 364 EPLIGDVAVSLAGRDAYR 381
>gi|145223659|ref|YP_001134337.1| hypothetical protein Mflv_3072 [Mycobacterium gilvum PYR-GCK]
gi|145216145|gb|ABP45549.1| hypothetical protein Mflv_3072 [Mycobacterium gilvum PYR-GCK]
Length=391
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/378 (30%), Positives = 184/378 (49%), Gaps = 25/378 (6%)
Query 20 ESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTT 79
WFL+RGLP VL R R R+L RSAPM++A + M + VT + A
Sbjct 11 HDWFLQRGLPLVLPRRVRARKLVQRSAPMVSAVGALTAVTMLLADVTGSDPDYGYAVRLG 70
Query 80 AQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIESG-------- 131
A VIL AL + +G + + + R AA+ M + F + SG
Sbjct 71 AIAVILIAAPFALEILHRLGTRMGE--ALRRWAALLVMTI-FVVIMPLTVSGWSGTAAAE 127
Query 132 -PIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFF 190
P+ ++ + + V L L G GS+ WA R + +GTL RALP+++LT +V+F
Sbjct 128 APVFIVISLLAVWLTYL----GFGSIALWAFRFAWVQVGALGTLMSRALPLLMLTVVVYF 183
Query 191 NTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQS-LAGT 249
+W ++A ++ ERL + FL +A F+V+ + VR L + + + + L T
Sbjct 184 TGELWQLSARMSRERLWQTIGFLSLVALLFMVATIRDEVRALRQERSERDDDATALLEDT 243
Query 250 PFATMG-DPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLR 308
P A++ P+ PL+ AE+ NVV ++ +Q +++++ + +L LGMI + +
Sbjct 244 PLASIHTGPAARTPLSLAEQANVVAVMVVAQAIQVVLFTAGLFVFFLALGMIAIPDDVTV 303
Query 309 EWTHYDSMTT-------TVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFL 361
W+ + T G+ P P +++ M LF+ L+ +Y + D YR F
Sbjct 304 LWSSEQTCAVGEPPCAGTWFGVHIPIPQTVVHMSLFVAVLSGLYFTVSTSVDPLYRERFF 363
Query 362 DPLIDDLHTALLARNRYR 379
+PLI D+ +L R+ YR
Sbjct 364 EPLIGDVAVSLAGRDAYR 381
>gi|256393640|ref|YP_003115204.1| hypothetical protein Caci_4500 [Catenulispora acidiphila DSM
44928]
gi|256359866|gb|ACU73363.1| hypothetical protein Caci_4500 [Catenulispora acidiphila DSM
44928]
Length=346
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/232 (29%), Positives = 114/232 (50%), Gaps = 7/232 (3%)
Query 153 VGSVLG-WAVRMTLEHLATVGTLAVRALPIVLLTALV-FFNTYVWLMAANINGERLTLAM 210
+G++LG W +R L + VG LAVRALP++ L +V FF+ W +AA ++ L +
Sbjct 109 LGAMLGYWTLRRVLAEVREVGHLAVRALPLLALFGMVIFFSGDFWRIAAALSTGWLWVTA 168
Query 211 VFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFP----LTRA 266
F + + AF+V++ E L R+ T + S A TP A + P L
Sbjct 169 AFFVVLIQAFLVARLPEETGTLPRACTP-DRIRASCAATPLAAFAEGEPDLATDPALGLG 227
Query 267 ERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMTFP 326
+R N+ L +Q ++I +++ + Y+V G I + P +L++W + GMT P
Sbjct 228 QRRNMFMYLLLTQTIQISLLSWMVFFFYVVFGAIAIRPEVLKDWFGQVPPDAQLWGMTLP 287
Query 327 APDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRY 378
+ + + L ++ +Y + A+ DA YR F D + +L A+ R Y
Sbjct 288 VNSQTLHVAVLLAGISALYFAITALTDAVYRREFFDRTLAELDKAIHMRCAY 339
>gi|238059981|ref|ZP_04604690.1| hypothetical protein MCAG_00947 [Micromonospora sp. ATCC 39149]
gi|237881792|gb|EEP70620.1| hypothetical protein MCAG_00947 [Micromonospora sp. ATCC 39149]
Length=416
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/248 (30%), Positives = 117/248 (48%), Gaps = 21/248 (8%)
Query 144 LVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPI-VLLTALVFFNTYVWLMAANIN 202
LVLL GVGS+L W+VR L + + RALP+ VLL+ F VW + + ++
Sbjct 139 LVLLNY-LGVGSLLAWSVREGLRQTTALREMTGRALPLFVLLSVFGFLAAEVWQVVSALD 197
Query 203 GERL-TLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGF 261
G R +A V A+AG F + + ++ ++ S P+ A A D PG
Sbjct 198 GSRFWAMAAVLTCAVAG-FSATISFSEMKEIVASD--YPRE----ANAALAHEADRPPGV 250
Query 262 -----------PLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREW 310
P++R ER+N+V LA +Q + ++ + V +++ GM + ++ W
Sbjct 251 LPNGDAHPPRRPVSRRERVNIVAKLALAQTFQAVLFSLVVFVFFVIFGMAAIGTDIIETW 310
Query 311 THYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHT 370
T VLG+ A L+R FL L+ +Y +A D +YR F DPL +
Sbjct 311 TGRVPQVAQVLGIEVFASWELVRTAAFLAMLSMVYFAASTSTDPKYRTAFYDPLSRSISL 370
Query 371 ALLARNRY 378
+LL R+ Y
Sbjct 371 SLLVRDNY 378
>gi|163841095|ref|YP_001625500.1| hypothetical protein RSal33209_2356 [Renibacterium salmoninarum
ATCC 33209]
gi|162954571|gb|ABY24086.1| hypothetical membrane protein [Renibacterium salmoninarum ATCC
33209]
Length=424
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/381 (26%), Positives = 175/381 (46%), Gaps = 29/381 (7%)
Query 20 ESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAA-------WAVVEGCLMAVFFVTDGGEVF 72
E WF ++GLP + + R RRL R AP+L WA+ A+ F++D
Sbjct 14 EQWFREQGLPYFVDRKSRGRRLLARCAPVLLFFALAALAWAIYSHS-SAIGFLSDE---- 68
Query 73 ISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAVATMAVA----------FA 122
++ Q ++L L VA+ + L+ L+++ AA T+A+A
Sbjct 69 -TSELNDTQALVLVSLPVAIIVLPLIVALIARRYFTMKFAAARTLALASIVLLILINPLI 127
Query 123 AASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIV 182
A S ++ + +V LVL G+GS LGW+VR L+ + LA ALP++
Sbjct 128 AIGSPETSWWSEIWQNVALVLLVLALGWLGLGSFLGWSVRAAFRQLSAIWLLAAVALPLL 187
Query 183 LLTALV-FFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQ 241
+L + F++ +W M A++ ++ ++FLL I FV+ + +R L T+ P+
Sbjct 188 ILVVIFAFYSQEMWQMTASLQRGQVFWLLMFLLGIGLLFVIYSARKELRDL--PETLTPE 245
Query 242 GSQSLAG-TPFATMGDPSPG--FPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLG 298
+ L G T A + + G L+R E+ NVV+++ +Q +++L+ + +VL
Sbjct 246 TRELLRGNTLLAGIQESQRGSWKELSRTEQANVVWVMVLAQCLQVLIFGLLVFLFMMVLA 305
Query 299 MIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRA 358
+ + L+ +W + + G+ P + +R+ FL A+ + +YR
Sbjct 306 KLSIPASLVDQWAGRPDVPLQMFGLNLPIGQTPVRVSAFLAAIGALNFVVSVNSSKDYRD 365
Query 359 MFLDPLIDDLHTALLARNRYR 379
F DPLI AL Y+
Sbjct 366 AFFDPLIQQTGKALTVHAAYQ 386
>gi|284047182|ref|YP_003397522.1| hypothetical protein Cwoe_5746 [Conexibacter woesei DSM 14684]
gi|283951403|gb|ADB54147.1| hypothetical protein Cwoe_5746 [Conexibacter woesei DSM 14684]
Length=362
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/229 (29%), Positives = 109/229 (48%), Gaps = 22/229 (9%)
Query 140 VVVGLVLLQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFF-NTYVWLMA 198
V++G+V G G+G+++ WA R LA L RA+P++L+ ALV F NT +W +
Sbjct 128 VLLGVVAFAWGFGLGAIVVWAARRLTGQLAQSLLLLARAVPLLLIFALVLFVNTEMWQVF 187
Query 199 ANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATMGDPS 258
+ + L + L +A F+V++ + V L R + AG+P
Sbjct 188 SGRSDATLIAVGLLLAVVATGFLVARLPKEVEALERDIL-------TGAGSP-------- 232
Query 259 PGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTT 318
PLTR +R NV +L S ++I VV A ++ GMI++ ++ WT T
Sbjct 233 ---PLTRGQRANVGLVLLISHGLQIAVVTCAIGAFFVTFGMIVIDAEVMESWTGSAGETI 289
Query 319 ---TVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPL 364
TVL + L+R+ + A++ +Y + + D YR FLD +
Sbjct 290 VALTVLDVPLRLTFELLRVAGAIAAVSGLYYAIAVLTDGAYREEFLDEI 338
>gi|319947730|ref|ZP_08021937.1| hypothetical protein ES5_00435 [Dietzia cinnamea P4]
gi|319438607|gb|EFV93520.1| hypothetical protein ES5_00435 [Dietzia cinnamea P4]
Length=379
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 162/392 (42%), Gaps = 46/392 (11%)
Query 8 PPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTD 67
P A+++ E GLP ++ R R + RSA + AA AV L A D
Sbjct 4 PDPTPASSLPAHEDHLRALGLPLMIAPSTRRREVLSRSAGVSAALAVAGTGLAAADRSND 63
Query 68 -------------GGEVFISATPTTAQWVILALLAVALPLASLVGWLVSQISSGRGQAAV 114
E+ + P ++ L PL VGWLVS+ + G A
Sbjct 64 YTTALLERVGPDSDPELLAAPEPIVQLLLLAIALVAVAPL---VGWLVSKTARRAGPATG 120
Query 115 ATMAVAFAAASDVI-------ESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEH 167
+ + + A V+ GP T + VL+ T G+GS++ W+ R
Sbjct 121 SALGLVSLIALVVVPHVAFDPHDGPTHRT-TLLAAAAVLVGTYTGLGSLVRWSARRVRRE 179
Query 168 LATVGTLAVRALPIVLLTAL-VFFNTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTV 226
L T+G + R LPI++L L +FF+ +W + ++ R + ++A+ V T
Sbjct 180 LTTMGPMVARVLPILMLAVLFLFFSVEIWQVMVELSWPRTLAVLGVVVALTVLLVGISTR 239
Query 227 ERVRPLLRSTTVMPQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVV 286
+ + LR D P PL R ER+N+V + + L++ +
Sbjct 240 DDILHELR---------------------DRGPEHPLRRGERINLVMVPVVATLIQAALF 278
Query 287 ASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYI 346
A++ +L LG I + WT T L P +L+R+ L L + + +
Sbjct 279 ATLVFFFFLTLGWIAVPDITETRWTLRPLNDTGGLLFGLPVSVTLVRVSLMLAVFSALNL 338
Query 347 SARAVDDAEYRAMFLDPLIDDLHTALLARNRY 378
+A A DA ++A F+ P++D++ L AR Y
Sbjct 339 AAAAASDAAHKARFVRPMLDEVVRGLAAREAY 370
>gi|256396988|ref|YP_003118552.1| hypothetical protein Caci_7888 [Catenulispora acidiphila DSM
44928]
gi|256363214|gb|ACU76711.1| hypothetical protein Caci_7888 [Catenulispora acidiphila DSM
44928]
Length=507
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/336 (25%), Positives = 141/336 (42%), Gaps = 57/336 (16%)
Query 6 RRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVE-GCLMAVFF 64
RR A + + E WF+KRGLP + ++ R+ P+ V + G ++
Sbjct 8 RRALADAHLHLDDVEKWFIKRGLPHFIENYKATEDVFNRALPLFVVLVVFQMGLELSSKT 67
Query 65 VTDGGEVFI---------------SATPTTAQWVIL--ALLAVALPLASLVGWLVSQISS 107
VT + + +W + V + L L+G +V ++S
Sbjct 68 VTWQDRLIGGAVGLAAVVVVFLAANLVRQRQRWYRWPRKIGPVEITLLVLLGPVVGKLS- 126
Query 108 GRGQAAVATMAVAFAAASDVIESGPIQLLRTAVVVGLVLLQTGCGVGSVLGWAVRMTLEH 167
G G AV L +V+ LV L T + VL WAVR +++
Sbjct 127 GAGWGAVVA-----------------DFLANILVLALVYLLTAYAILPVLKWAVRHSIDE 169
Query 168 LATVGTLAVRALPIV-LLTALVFFNTYVWLMAANINGE-RLTLAMVFLLAIAGAFVVSKT 225
L +G LA +ALP++ L +F N +W +A++ +L +F AI F++ +
Sbjct 170 LGNLGNLASKALPMLALFGTFLFLNVDMWHIASSFEQRSQLWFTTLFFAAITFLFLMVRL 229
Query 226 VERVRPLLRSTTVMPQGSQSL-------AGTPF----ATMGDPSPGFPLTRAERLNVVFL 274
VR L QG L A TP + D P R +++N++F+
Sbjct 230 PGEVRNL--------QGDYYLEAVVAASADTPLHEHVGDLDDELPQLRTNRRQQVNMLFV 281
Query 275 LAASQLVEILVVASVGAAIYLVLGMIILTPPLLREW 310
LA +Q+++IL+++ V ++ LG + +T + +W
Sbjct 282 LAFTQVIQILLLSVVVFVYFVSLGKLAVTNGQVADW 317
>gi|283458970|ref|YP_003363618.1| D-mannonate dehydratase [Rothia mucilaginosa DY-18]
gi|283135033|dbj|BAI65798.1| D-mannonate dehydratase [Rothia mucilaginosa DY-18]
Length=476
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/420 (22%), Positives = 177/420 (43%), Gaps = 60/420 (14%)
Query 12 RAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCLM-----AVFFVT 66
RA + ++ WF K+G+P ++ R R +PRS P + ++ C + +F V
Sbjct 37 RADMLKQSNIWFRKQGVPLIIPARQRALDAFPRSVPWILWAGIMHICYIFLRDILLFVVE 96
Query 67 D-GGEV--FISATPTTAQWVILALLAVALPLASLVG-WLVSQISSGRG------------ 110
D G + +I A + + AL LP+ L G +LV I SG
Sbjct 97 DVKGSLPNYIKALTSDS-----ALSNEVLPVLVLGGIFLVMPIISGAFIALAHMLMVRTP 151
Query 111 ---QAAVATMAVAFAA---ASDVIESGPIQLLRTA---------VVVGLVLLQTGCGVGS 155
Q + + FA + V E+ ++ + +V+G + L GV +
Sbjct 152 QWVQITTGILTLLFAGMLFTTGVFEASTLEGIDFVYDGGQVFPLIVIG-IYLAIFLGVDT 210
Query 156 VLGWAVRMTLEHLATVGTLAVRALPIVLLTAL-VFFNTYVWLMAANINGERLTLAMVFLL 214
+LGW+ + + LA++ + + LP+++++ L +F N +W +A ++ R T A++ L+
Sbjct 211 ILGWSFKHAIHQLASLPPMIAKVLPVLMVSVLFIFVNADLWKLANGLSFPR-TWAVLGLM 269
Query 215 AIAGAFVV-SKTVERVRPLL---------RSTTVMPQGSQSLAGTPFATMGDPSP----- 259
+ FVV + ++ER LL R + + + +L G + T D
Sbjct 270 GLLAVFVVVTTSLERTARLLGRNRGDDIARFSESDYEHAAALEGGIWNTAQDWVEEQKIL 329
Query 260 -GFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTT 318
PL A N++ + Q+++ + + ++ I ++ + W
Sbjct 330 EHRPLKIAPWSNLIIIPMIGQIIQATLFMLLVFGFFMGFSSIAISDTTIESWMSIKPEHL 389
Query 319 TVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRY 378
+LG+ +I++ + + + + A D +Y FL P+I+ + L+ R+ Y
Sbjct 390 KILGVDTNINAVVIKVSMIVAVFSGLNFVATTSSDEKYARSFLKPMIERIKHILIIRDIY 449
>gi|326333605|ref|ZP_08199844.1| hypothetical protein NBCG_05040 [Nocardioidaceae bacterium Broad-1]
gi|325948621|gb|EGD40722.1| hypothetical protein NBCG_05040 [Nocardioidaceae bacterium Broad-1]
Length=243
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (24%), Positives = 85/200 (43%), Gaps = 14/200 (7%)
Query 191 NTYVWLMAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPL------------LRSTTV 238
N VW M+AN++ L L + A AF++ + E V + R T +
Sbjct 32 NAEVWEMSANLDLGALWLVTLLFAGSAVAFLLVRLPEEVDRIDDDVDAAFLTRTCRGTPL 91
Query 239 MPQGSQSLAGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLG 298
++ + DP+ +T ER N+V L Q +++++A A +L+ G
Sbjct 92 EAACAELVEDAREGRGADPAELAQVTGFERWNLVLALLVIQATQVVLIAVAVFAFFLLFG 151
Query 299 MIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRA 358
I++T + WT S+ L L+++ LFL + +Y++ V D YR
Sbjct 152 AIVMTDGVQMGWTGQQSLHN--LSWLPNVSGELVKVALFLAGFSSLYLTVSTVTDETYRE 209
Query 359 MFLDPLIDDLHTALLARNRY 378
F ++ ++ A+ R Y
Sbjct 210 QFFGTVLREIERAVGMRAVY 229
>gi|119717410|ref|YP_924375.1| hypothetical protein Noca_3186 [Nocardioides sp. JS614]
gi|119538071|gb|ABL82688.1| hypothetical protein Noca_3186 [Nocardioides sp. JS614]
Length=324
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/234 (25%), Positives = 109/234 (47%), Gaps = 20/234 (8%)
Query 155 SVLGWAVRMTLEHLATVGTLAVRALPIVLLT-ALVFFNTYVWLMAANINGERLTLAMVFL 213
++ W ++ T L + + RALP++LL +F NT +W + N++ L L ++
Sbjct 94 QIVAWGLKRTFGGLRRLLPMTTRALPLLLLAITFLFINTEMWQVGGNLSVGSLWLVVLLF 153
Query 214 LAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSLAGTPFATM---------GDPSPGFPLT 264
+A AF++ + E V + ++ AG+P DP+ +T
Sbjct 154 ALLAVAFLLVRLPEEVDRADDAVDDALL-LRACAGSPLEETCRELVEDPDADPAAYAEVT 212
Query 265 RAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYDSMTTTVLGMT 324
ER N++ +L Q+V++L+++ A +V G +I+T P++ W D
Sbjct 213 GFERWNLILVLMVVQVVQVLLLSLAVFAFLMVFGGLIMTGPVIEAWQAGDD--------- 263
Query 325 FPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRY 378
F +L+++ +FL A + +Y++ V D YRA F + +L A+ R Y
Sbjct 264 FSESRALVQVSVFLAAFSGLYLTVSTVTDETYRAQFFSGVTRELERAVGMRAVY 317
>gi|284033787|ref|YP_003383718.1| hypothetical protein Kfla_5915 [Kribbella flavida DSM 17836]
gi|283813080|gb|ADB34919.1| hypothetical protein Kfla_5915 [Kribbella flavida DSM 17836]
Length=359
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 63/127 (50%), Gaps = 5/127 (3%)
Query 256 DPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREWTHYD- 314
D G PL R +RLN+ L Q +++LVV++ ++ GM+ ++ + +W D
Sbjct 225 DAGSGPPLRRMQRLNLSVSLVIRQWMQVLVVSAGVGVFFVGFGMLAISARIYADWG-IDP 283
Query 315 ---SMTTTVLGMTFPAPDSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTA 371
S +LG ++++++ + + T +Y S + DA YR FLD + D+L
Sbjct 284 GAWSYEFWLLGHPLLISEAMVKVAIGIANFTGLYYSISLMTDATYRTEFLDNVSDELREL 343
Query 372 LLARNRY 378
AR+ Y
Sbjct 344 FTARSEY 350
>gi|255326556|ref|ZP_05367637.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
gi|255296432|gb|EET75768.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
Length=347
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/263 (26%), Positives = 120/263 (46%), Gaps = 51/263 (19%)
Query 12 RAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLAAWAVVEGCL-----MAVFFVT 66
RA + ++ WF K+G P ++ R R +PRS P + ++ C + +F V
Sbjct 37 RADMLKQSNIWFRKQGAPLIIPARQRALDAFPRSVPWILWAGIMHICYIFLRDLLIFVVE 96
Query 67 D-GGEV--FISATPTTAQWVILALLAVALPLASLVG-WLVSQISSGRG------------ 110
D G + +I A + + AL LP+ L G +L+ + SG
Sbjct 97 DVKGSLPNYIKALTSDS-----ALSNEVLPVLVLGGIFLIMPVISGVFITLAHKLMVRTP 151
Query 111 ---QAAVATMAVAFAA--------ASD-------VIESGPIQLLRTAVVVGLVLLQTGCG 152
Q + V FA AS+ V + G + L +V+G + L G
Sbjct 152 QWVQITTGILTVLFAGMLFTAGVFASNTLDGLDFVYDGGQVFPL---IVIG-IYLAIFLG 207
Query 153 VGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTAL-VFFNTYVWLMAANINGERLTLAMV 211
V +VLGW+++ + LA++ + + LP+++++ L +F N +W +A ++ R T A++
Sbjct 208 VDTVLGWSLKHAIHQLASLPPMIAKVLPVLMVSVLFIFVNADLWKLANGLSFPR-TWAVL 266
Query 212 FLLAIAGAF-VVSKTVERVRPLL 233
L+ + F VV+ ++ER LL
Sbjct 267 GLMGLLAVFVVVTTSLERTARLL 289
>gi|46204404|ref|ZP_00050048.2| hypothetical protein Magn03003744 [Magnetospirillum magnetotacticum
MS-1]
Length=198
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/135 (26%), Positives = 65/135 (49%), Gaps = 9/135 (6%)
Query 263 LTRAERLNVVFLLAASQLVEILVVASVGAAIYLVLGMIILTPPLLREW-----THYDSMT 317
+R + N+ ++A SQL+++LVV+ ++ LG + +TP ++ W T +++
Sbjct 63 FSRGQTANLATMIATSQLLQVLVVSLGMGVFFMALGTLTVTPEVMALWDVDGGTWQRTLS 122
Query 318 TTVLGMTFPAP----DSLIRMCLFLGALTFMYISARAVDDAEYRAMFLDPLIDDLHTALL 373
G A +L+R+ + + T +Y + DA YR F+D + L L
Sbjct 123 LVGGGGVGGADLVVTQTLLRVSVAIATFTGLYYAISVQVDAVYREEFVDGIETQLADVLR 182
Query 374 ARNRYRNNVVTAPCA 388
AR+RY + + P A
Sbjct 183 ARSRYLDLLAPPPPA 197
>gi|255599143|ref|XP_002537162.1| efflux pump antibiotic resistance protein, putative [Ricinus
communis]
gi|223517275|gb|EEF25221.1| efflux pump antibiotic resistance protein, putative [Ricinus
communis]
Length=322
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/122 (32%), Positives = 52/122 (43%), Gaps = 20/122 (16%)
Query 72 FISATPTTAQWVILA-LLAVALPLASLVGWLVSQISSGRGQAAVATMAVAFAAASDVIES 130
+SA T Q VI+A LLA+ L LA+ W + + G G +E
Sbjct 142 LMSAARTPGQGVIMAVLLAIGLSLAAAACWRAT-LRHGTGDPR----------RGHALED 190
Query 131 GPIQLLRTAVVVGLVLLQTGCGVGSVLGW--------AVRMTLEHLATVGTLAVRALPIV 182
P+ L + LVL+ G G G V W VR+T+ H +VG + R PIV
Sbjct 191 APLTLAAWSEADHLVLVSAGTGHGQVDDWLKQRGVQRRVRLTVPHFMSVGYILQRTDPIV 250
Query 183 LL 184
L
Sbjct 251 TL 252
>gi|291454334|ref|ZP_06593724.1| alpha-ketoglutarate transporter [Streptomyces albus J1074]
gi|291357283|gb|EFE84185.1| alpha-ketoglutarate transporter [Streptomyces albus J1074]
Length=454
Score = 36.2 bits (82), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/94 (26%), Positives = 43/94 (46%), Gaps = 2/94 (2%)
Query 35 RGRCRRLWPRSAPMLAAWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPL 94
R + +++W SA + W + + A F G F S PT + AV +
Sbjct 3 RQQWKKIWVGSAGNMVEW--FDWFVYASFATYFAGSFFPSGNPTAQLMNTAGIFAVGFFM 60
Query 95 ASLVGWLVSQISSGRGQAAVATMAVAFAAASDVI 128
+ GWL+ ++ +G+ A T+ V+ +AS V+
Sbjct 61 RPVGGWLLGRVGDRKGRKAALTLTVSLMSASAVL 94
Lambda K H
0.326 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 779602889160
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40