BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2120c Length=160 Score E Sequences producing significant alignments: (Bits) Value gi|289745393|ref|ZP_06504771.1| integral membrane protein [Mycob... 300 3e-80 gi|15841612|ref|NP_336649.1| hypothetical protein MT2180 [Mycoba... 300 4e-80 gi|15609257|ref|NP_216636.1| integral membrane protein [Mycobact... 299 9e-80 gi|339295039|gb|AEJ47150.1| hypothetical protein CCDC5079_1960 [... 289 1e-76 gi|183983101|ref|YP_001851392.1| hypothetical protein MMAR_3102 ... 253 9e-66 gi|240171396|ref|ZP_04750055.1| hypothetical protein MkanA1_1893... 202 1e-50 gi|118465197|ref|YP_881594.1| hypothetical protein MAV_2394 [Myc... 183 9e-45 gi|336461997|gb|EGO40846.1| putative membrane protein [Mycobacte... 180 5e-44 gi|41407943|ref|NP_960779.1| hypothetical protein MAP1845c [Myco... 180 5e-44 gi|254775063|ref|ZP_05216579.1| hypothetical protein MaviaA2_103... 180 5e-44 gi|118470293|ref|YP_888458.1| integral membrane protein [Mycobac... 174 4e-42 gi|296165194|ref|ZP_06847741.1| integral membrane protein [Mycob... 173 8e-42 gi|342859814|ref|ZP_08716467.1| hypothetical protein MCOL_13083 ... 172 1e-41 gi|108800109|ref|YP_640306.1| hypothetical protein Mmcs_3143 [My... 172 2e-41 gi|333990419|ref|YP_004523033.1| hypothetical protein JDM601_177... 171 3e-41 gi|254819653|ref|ZP_05224654.1| hypothetical protein MintA_07009... 160 7e-38 gi|337266737|ref|YP_004610792.1| 17 kDa surface antigen [Mesorhi... 153 8e-36 gi|145223645|ref|YP_001134323.1| 17 kDa surface antigen [Mycobac... 145 2e-33 gi|319781831|ref|YP_004141307.1| hypothetical protein Mesci_2105... 142 2e-32 gi|13472463|ref|NP_104030.1| hypothetical protein mlr2767 [Mesor... 142 2e-32 gi|227819531|ref|YP_002823502.1| transmembrane protein [Sinorhiz... 138 3e-31 gi|299138873|ref|ZP_07032050.1| conserved hypothetical protein [... 137 4e-31 gi|120404441|ref|YP_954270.1| 17 kDa surface antigen [Mycobacter... 137 5e-31 gi|320107299|ref|YP_004182889.1| putative transmembrane protein ... 135 1e-30 gi|116623320|ref|YP_825476.1| hypothetical protein Acid_4229 [Ca... 134 6e-30 gi|169630096|ref|YP_001703745.1| hypothetical protein MAB_3013 [... 131 3e-29 gi|295689302|ref|YP_003592995.1| hypothetical protein Cseg_1904 ... 130 6e-29 gi|209546213|ref|YP_002278103.1| hypothetical protein Rleg2_5830... 126 1e-27 gi|335035823|ref|ZP_08529154.1| hypothetical protein AGRO_3154 [... 125 2e-27 gi|16119769|ref|NP_396475.1| hypothetical protein Atu5538 [Agrob... 124 4e-27 gi|218673124|ref|ZP_03522793.1| putative transmembrane protein [... 124 5e-27 gi|223938975|ref|ZP_03630861.1| conserved hypothetical protein [... 123 8e-27 gi|299139663|ref|ZP_07032836.1| conserved hypothetical protein [... 121 3e-26 gi|241666660|ref|YP_002984744.1| hypothetical protein Rleg_6743 ... 120 4e-26 gi|116255586|ref|YP_771419.1| putative transmembrane protein [Rh... 120 6e-26 gi|225872430|ref|YP_002753885.1| hypothetical protein ACP_0769 [... 120 7e-26 gi|218659270|ref|ZP_03515200.1| hypothetical protein RetlI_06186... 118 3e-25 gi|167648951|ref|YP_001686614.1| hypothetical protein Caul_4996 ... 116 1e-24 gi|86360545|ref|YP_472433.1| hypothetical protein RHE_PE00271 [R... 114 3e-24 gi|298292018|ref|YP_003693957.1| transmembrane protein [Starkeya... 110 7e-23 gi|190895531|ref|YP_001985823.1| hypothetical protein RHECIAT_PA... 108 4e-22 gi|295700326|ref|YP_003608219.1| hypothetical protein BC1002_474... 101 3e-20 gi|209520337|ref|ZP_03269102.1| conserved hypothetical protein [... 100 7e-20 gi|21233315|ref|NP_639232.1| hypothetical protein XCC3892 [Xanth... 99.4 1e-19 gi|217979007|ref|YP_002363154.1| hypothetical protein Msil_2875 ... 95.1 3e-18 gi|218515202|ref|ZP_03512042.1| hypothetical protein Retl8_16668... 90.5 7e-17 gi|320109217|ref|YP_004184807.1| hypothetical protein AciPR4_406... 83.6 9e-15 gi|220923579|ref|YP_002498881.1| hypothetical protein Mnod_3670 ... 81.3 4e-14 gi|188993477|ref|YP_001905487.1| hypothetical protein xccb100_40... 81.3 5e-14 gi|341935174|gb|AEL05313.1| conserved hypothetical protein [Xant... 80.9 6e-14 >gi|289745393|ref|ZP_06504771.1| integral membrane protein [Mycobacterium tuberculosis 02_1987] gi|289685921|gb|EFD53409.1| integral membrane protein [Mycobacterium tuberculosis 02_1987] Length=166 Score = 300 bits (769), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA Sbjct 7 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 66 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG Sbjct 67 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 126 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL Sbjct 127 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 166 >gi|15841612|ref|NP_336649.1| hypothetical protein MT2180 [Mycobacterium tuberculosis CDC1551] gi|253798818|ref|YP_003031819.1| hypothetical protein TBMG_01860 [Mycobacterium tuberculosis KZN 1435] gi|254232280|ref|ZP_04925607.1| hypothetical protein TBCG_02068 [Mycobacterium tuberculosis C] gi|13881862|gb|AAK46463.1| hypothetical protein MT2180 [Mycobacterium tuberculosis CDC1551] gi|124601339|gb|EAY60349.1| hypothetical protein TBCG_02068 [Mycobacterium tuberculosis C] gi|253320321|gb|ACT24924.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|323719333|gb|EGB28474.1| membrane protein [Mycobacterium tuberculosis CDC1551A] Length=171 Score = 300 bits (769), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA Sbjct 12 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 71 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG Sbjct 72 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 131 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL Sbjct 132 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 171 >gi|15609257|ref|NP_216636.1| integral membrane protein [Mycobacterium tuberculosis H37Rv] gi|31793300|ref|NP_855793.1| integral membrane protein [Mycobacterium bovis AF2122/97] gi|121638002|ref|YP_978226.1| putative integral membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 70 more sequence titles Length=160 Score = 299 bits (765), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 159/160 (99%), Positives = 160/160 (100%), Gaps = 0/160 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +THVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA Sbjct 1 MTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG Sbjct 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL Sbjct 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 >gi|339295039|gb|AEJ47150.1| hypothetical protein CCDC5079_1960 [Mycobacterium tuberculosis CCDC5079] Length=154 Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%) Query 7 LLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVN 66 +LLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVN Sbjct 1 MLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVN 60 Query 67 DKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTR 126 DKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTR Sbjct 61 DKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTR 120 Query 127 LVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 LVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL Sbjct 121 LVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 154 >gi|183983101|ref|YP_001851392.1| hypothetical protein MMAR_3102 [Mycobacterium marinum M] gi|183176427|gb|ACC41537.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=160 Score = 253 bits (645), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 141/160 (89%), Positives = 151/160 (95%), Gaps = 0/160 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +TH +VLLLALLIGVVAGLRS+TAPAVVSWAAFL WINLHGTWASW+GN +TVVI+SVLA Sbjct 1 MTHFVVLLLALLIGVVAGLRSMTAPAVVSWAAFLSWINLHGTWASWVGNLITVVILSVLA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELVNDK PKTPPRT PVFAVRIILGAFAGAVIGTAWGYRWGGLGAG+IGAVLGT+GG Sbjct 61 VGELVNDKLPKTPPRTAPPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGIIGAVLGTLGG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 YQART+LVAARGGHDLPIALLEDS+AVLGGFAIVA AAL Sbjct 121 YQARTKLVAARGGHDLPIALLEDSIAVLGGFAIVATVAAL 160 >gi|240171396|ref|ZP_04750055.1| hypothetical protein MkanA1_18936 [Mycobacterium kansasii ATCC 12478] Length=151 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 122/151 (81%), Positives = 133/151 (89%), Gaps = 1/151 (0%) Query 11 LLIGVVAGLRSLTAPAVVSWAAFLGWI-NLHGTWASWMGNFVTVVIVSVLAVAELVNDKR 69 +LIGVVAGLRS+TAPA VSWA +LGW L TWASW+GN VTVV +S LAVAELVNDK Sbjct 1 MLIGVVAGLRSVTAPAAVSWAGYLGWFPTLQHTWASWVGNIVTVVTLSALAVAELVNDKL 60 Query 70 PKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRLVA 129 PKTPPRT PVFAVRIILG FAGAVIGTAWGY++GGLGAGV+GAVLGT+GGY AR RLVA Sbjct 61 PKTPPRTAAPVFAVRIILGGFAGAVIGTAWGYKFGGLGAGVVGAVLGTLGGYHARRRLVA 120 Query 130 ARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 A GG DLPIALLEDSVAVLGGFA+VA+AAAL Sbjct 121 ASGGRDLPIALLEDSVAVLGGFAVVASAAAL 151 >gi|118465197|ref|YP_881594.1| hypothetical protein MAV_2394 [Mycobacterium avium 104] gi|118166484|gb|ABK67381.1| conserved hypothetical protein [Mycobacterium avium 104] Length=170 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 111/156 (72%), Positives = 129/156 (83%), Gaps = 0/156 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +TH L++LLALLIGVVAGLRSLTAPAVV+WAA +GWI+LHGTWASWM N +TV++ +VLA Sbjct 1 MTHALIVLLALLIGVVAGLRSLTAPAVVAWAALIGWIDLHGTWASWMANIITVIVFTVLA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELVNDK PKTP RT P+FA RI+LG AGA +G + + LGAGVIGAVLGT+GG Sbjct 61 VGELVNDKLPKTPARTAAPIFAARIVLGGLAGAALGAWPHWTFTALGAGVIGAVLGTLGG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAA 156 Y AR RLVAA GG DLPIALLED VA+ GGFAI+AA Sbjct 121 YHARRRLVAATGGKDLPIALLEDVVAIAGGFAILAA 156 >gi|336461997|gb|EGO40846.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=170 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/156 (70%), Positives = 128/156 (83%), Gaps = 0/156 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +TH L++LLALLIGVVAGLRSLTAPAVV+WAA +GW++LHGTWASWM N +TV++ +VLA Sbjct 1 MTHALIVLLALLIGVVAGLRSLTAPAVVAWAALIGWVDLHGTWASWMANIITVIVFTVLA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELVNDK PKTP RT P+FA RI+LG AGA +G + + LGAGVIGAVLGT+GG Sbjct 61 VGELVNDKLPKTPARTAAPIFAARIVLGGLAGAALGAWPHWTFTALGAGVIGAVLGTLGG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAA 156 Y R RLVAA GG DLPIALLED VA+ GGFAI+AA Sbjct 121 YHVRRRLVAATGGKDLPIALLEDVVAIAGGFAILAA 156 >gi|41407943|ref|NP_960779.1| hypothetical protein MAP1845c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396297|gb|AAS04162.1| hypothetical protein MAP_1845c [Mycobacterium avium subsp. paratuberculosis K-10] Length=184 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 110/156 (71%), Positives = 128/156 (83%), Gaps = 0/156 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 VTH L++LLALLIGVVAGLRSLTAPAVV+WAA +GW++LHGTWASWM N +TV++ +VLA Sbjct 15 VTHALIVLLALLIGVVAGLRSLTAPAVVAWAALIGWVDLHGTWASWMANIITVIVFTVLA 74 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELVNDK PKTP RT P+FA RI+LG AGA +G + + LGAGVIGAVLGT+GG Sbjct 75 VGELVNDKLPKTPARTAAPIFAARIVLGGLAGAALGAWPHWTFTALGAGVIGAVLGTLGG 134 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAA 156 Y R RLVAA GG DLPIALLED VA+ GGFAI+AA Sbjct 135 YHVRRRLVAATGGKDLPIALLEDVVAIAGGFAILAA 170 >gi|254775063|ref|ZP_05216579.1| hypothetical protein MaviaA2_10376 [Mycobacterium avium subsp. avium ATCC 25291] Length=160 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 102/146 (70%), Positives = 119/146 (82%), Gaps = 0/146 (0%) Query 11 LLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVNDKRP 70 +LIGVVAGLRSLTAPAVV+WAA +GW++LHGTWASWM N +TV++ +VLAV ELVNDK P Sbjct 1 MLIGVVAGLRSLTAPAVVAWAALIGWVDLHGTWASWMANIITVIVFTVLAVGELVNDKLP 60 Query 71 KTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRLVAA 130 KTP RT P+FA RI+LG AGA +G + + LGAGVIGAVLGT+GGY AR LVAA Sbjct 61 KTPARTAAPIFAARIVLGGLAGAALGAWPHWTFTALGAGVIGAVLGTLGGYHARRWLVAA 120 Query 131 RGGHDLPIALLEDSVAVLGGFAIVAA 156 GG DLPIALLED VA+ GGFAI+AA Sbjct 121 TGGKDLPIALLEDVVAIAGGFAILAA 146 >gi|118470293|ref|YP_888458.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118171580|gb|ABK72476.1| probable conserved integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=160 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/158 (68%), Positives = 126/158 (80%), Gaps = 0/158 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +TH LVLLLALLIGVVAGLR++TAPA V+WAA L WINL TW W+ + +TV ++++LA Sbjct 1 MTHFLVLLLALLIGVVAGLRAMTAPAAVAWAAALQWINLDNTWVEWLAHPITVTVLTILA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELV DK PKTP R F R++ GAFAGAVIGTAWGY++GGLGAG+IGAVLGT+GG Sbjct 61 VGELVTDKLPKTPSRKTAIQFGTRLVTGAFAGAVIGTAWGYKFGGLGAGMIGAVLGTLGG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 +AR RLVAA GG DLPIAL ED+VAVLGGF I A A Sbjct 121 AEARRRLVAATGGRDLPIALSEDAVAVLGGFGIAALTA 158 >gi|296165194|ref|ZP_06847741.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899383|gb|EFG78842.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=183 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 110/158 (70%), Positives = 127/158 (81%), Gaps = 4/158 (2%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAF---LGWINLHGTWASWMGNFVTVVIVS 57 VTH LVLLLALLIGVVAGLRSLTAPAVV+WAA LGWI+LHGTWA+WMGN +T V+ + Sbjct 12 VTHALVLLLALLIGVVAGLRSLTAPAVVAWAACPAALGWIDLHGTWAAWMGNIITAVVFT 71 Query 58 VLAVAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGT 117 VLAV ELVNDK PKTP RT P+FA RI++G AGA +G + + LGAGVIGAVLGT Sbjct 72 VLAVGELVNDKLPKTPARTAAPIFAARIVMGGLAGAALGAWPHWTFSALGAGVIGAVLGT 131 Query 118 MGGYQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVA 155 +GGYQAR RL AA G DL +ALLED+VA++GGFAI A Sbjct 132 LGGYQARKRLAAAT-GKDLAVALLEDAVAIVGGFAIAA 168 >gi|342859814|ref|ZP_08716467.1| hypothetical protein MCOL_13083 [Mycobacterium colombiense CECT 3035] gi|342132946|gb|EGT86166.1| hypothetical protein MCOL_13083 [Mycobacterium colombiense CECT 3035] Length=159 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/145 (67%), Positives = 117/145 (81%), Gaps = 3/145 (2%) Query 15 VVAGLRSLTAPAVVSWAAF---LGWINLHGTWASWMGNFVTVVIVSVLAVAELVNDKRPK 71 +VAGLRSLTAPAVV+WAA+ LGWI+LHGTWA WM + + V++ +VLAV EL+NDK PK Sbjct 1 MVAGLRSLTAPAVVAWAAYPAVLGWIDLHGTWAGWMASIIAVIVFTVLAVGELINDKLPK 60 Query 72 TPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRLVAAR 131 TP RT P+FA RI++G AGA +G + + LGAGVIGAVLGT+GGY AR RLVAA Sbjct 61 TPARTAPPIFAARIVMGGLAGAALGAWPHWTFTALGAGVIGAVLGTLGGYHARRRLVAAT 120 Query 132 GGHDLPIALLEDSVAVLGGFAIVAA 156 GG DLPIALLED+VA+LGGFAI+AA Sbjct 121 GGRDLPIALLEDAVAILGGFAILAA 145 >gi|108800109|ref|YP_640306.1| hypothetical protein Mmcs_3143 [Mycobacterium sp. MCS] gi|119869237|ref|YP_939189.1| hypothetical protein Mkms_3205 [Mycobacterium sp. KMS] gi|126435734|ref|YP_001071425.1| hypothetical protein Mjls_3155 [Mycobacterium sp. JLS] gi|108770528|gb|ABG09250.1| putative conserved integral membrane protein [Mycobacterium sp. MCS] gi|119695326|gb|ABL92399.1| putative conserved integral membrane protein [Mycobacterium sp. KMS] gi|126235534|gb|ABN98934.1| putative conserved integral membrane protein [Mycobacterium sp. JLS] Length=160 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/153 (72%), Positives = 123/153 (81%), Gaps = 0/153 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +TH LVLLLALLIGVVAGLR+ TAPA V+WAA LGWI L GTWA W+ + +TV + SVLA Sbjct 1 MTHALVLLLALLIGVVAGLRTFTAPAAVAWAAMLGWIVLDGTWAQWLAHPITVAVFSVLA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELV D+ PKTP R F R++ G FAGAVIGTAWGY +GGLGAGVIGAVLGT+GG Sbjct 61 VGELVTDQLPKTPSRKTAMQFIPRLVSGGFAGAVIGTAWGYTFGGLGAGVIGAVLGTLGG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAI 153 Y+AR RLVAA G DLPIALLED VAV+GGFAI Sbjct 121 YEARRRLVAANRGRDLPIALLEDVVAVVGGFAI 153 >gi|333990419|ref|YP_004523033.1| hypothetical protein JDM601_1779 [Mycobacterium sp. JDM601] gi|333486387|gb|AEF35779.1| integral membrane protein [Mycobacterium sp. JDM601] Length=160 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 110/160 (69%), Positives = 125/160 (79%), Gaps = 0/160 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +TH LVLLLALLIGVVAGLR+LTAPAV++WAA L WINL GTWA W+ + TV I++VLA Sbjct 1 MTHFLVLLLALLIGVVAGLRALTAPAVMAWAAALHWINLDGTWAQWLSHPATVTILTVLA 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V ELV D+ PKTP RTV F RI+LG FAGAV+GTAW Y W LGAG+IGAV+GT+ G Sbjct 61 VGELVTDQLPKTPNRTVPLQFTARIVLGGFAGAVLGTAWNYTWTALGAGMIGAVIGTLVG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAAAL 160 + R RLVA GG DLPIALLEDSVAVLGG AI A A L Sbjct 121 FAVRQRLVAVSGGRDLPIALLEDSVAVLGGIAIAAYTAVL 160 >gi|254819653|ref|ZP_05224654.1| hypothetical protein MintA_07009 [Mycobacterium intracellulare ATCC 13950] Length=166 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 105/152 (70%), Positives = 122/152 (81%), Gaps = 4/152 (2%) Query 7 LLLALLIGVVAGLRSLTAPAVVSWAA---FLGWINLHGTWASWMGNFVTVVIVSVLAVAE 63 +LLALLIGVVAGLRSLTAPAVV+WAA LGWI+LHGTWASWM + V VV+ +VLAV E Sbjct 1 MLLALLIGVVAGLRSLTAPAVVAWAAAPALLGWIDLHGTWASWMASIVAVVVFTVLAVGE 60 Query 64 LVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQA 123 L+NDK PKTPPRT P+FA RI++G AGA +G + + LGAGVIGAVLGT+GGYQA Sbjct 61 LINDKLPKTPPRTAAPIFAGRIVMGGLAGAALGAWPHWTFTALGAGVIGAVLGTLGGYQA 120 Query 124 RTRLVAARGGHDLPIALLEDSVAVLGGFAIVA 155 R RL AA G DLPIALLED+VA++GG IVA Sbjct 121 RKRLAAA-AGRDLPIALLEDAVAIVGGLVIVA 151 >gi|337266737|ref|YP_004610792.1| 17 kDa surface antigen [Mesorhizobium opportunistum WSM2075] gi|336027047|gb|AEH86698.1| 17 kDa surface antigen [Mesorhizobium opportunistum WSM2075] Length=153 Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 87/154 (57%), Positives = 113/154 (74%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 ++ +LALLIGV+AGLR++TAPA V+W A+LGW+ + GTWAS+M ++ V I ++LA+ EL Sbjct 1 MLYVLALLIGVIAGLRAMTAPAAVAWGAWLGWLPVAGTWASFMSHWAAVGIFTILAIIEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 V D+ P TP R V F RI+LGAF+GAVIG G GGL AG IGAV+GT+GG +AR Sbjct 61 VTDQLPSTPSRKVPQQFGARILLGAFSGAVIGATGGSTIGGLIAGAIGAVIGTLGGAEAR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 RL AA G D P A +ED+VA++GG IVAA A Sbjct 121 GRLAAAF-GKDPPAAFIEDAVAIIGGLLIVAAVA 153 >gi|145223645|ref|YP_001134323.1| 17 kDa surface antigen [Mycobacterium gilvum PYR-GCK] gi|315443972|ref|YP_004076851.1| hypothetical protein Mspyr1_23730 [Mycobacterium sp. Spyr1] gi|145216131|gb|ABP45535.1| 17 kDa surface antigen [Mycobacterium gilvum PYR-GCK] gi|315262275|gb|ADT99016.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=161 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/151 (53%), Positives = 104/151 (69%), Gaps = 0/151 (0%) Query 1 VTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLA 60 +T VLVL+LAL IGVVAGLR++TAPAVV+W A LGWI++ W+ WM + +T ++++ Sbjct 1 MTQVLVLVLALAIGVVAGLRAMTAPAVVAWGAMLGWIDVADKWSEWMAHPITATVLTIFL 60 Query 61 VAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGG 120 V EL+ D+ PKTP R V P F R+I G FAGAVIG+A+ + + GAG+IGAVLGTM G Sbjct 61 VGELITDQLPKTPSRKVPPQFIARLISGGFAGAVIGSAFFHTFSATGAGMIGAVLGTMAG 120 Query 121 YQARTRLVAARGGHDLPIALLEDSVAVLGGF 151 R L G D P A +ED +AV GGF Sbjct 121 AALRAGLADRNHGKDRPGAFIEDVIAVGGGF 151 >gi|319781831|ref|YP_004141307.1| hypothetical protein Mesci_2105 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167719|gb|ADV11257.1| hypothetical protein Mesci_2105 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length=153 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/154 (56%), Positives = 111/154 (73%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 ++ +LALLIGV+AGLR++TAPA ++W A+LGW+ + GTWAS+M ++ V I ++LA+ EL Sbjct 1 MLYILALLIGVIAGLRAMTAPAAIAWGAYLGWLTVAGTWASFMSHWAAVGIFTILAIVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 V D+ P TP R V F RI+ GAF GAVIG G GGL AG IGAV+GT+GG +AR Sbjct 61 VTDQLPSTPSRKVPQQFGARIVTGAFTGAVIGATGGATIGGLIAGAIGAVIGTLGGAEAR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 RL AA G D P A +ED+VA++GG IVAA A Sbjct 121 GRLAAAF-GKDPPAAFIEDAVAIIGGLLIVAAVA 153 >gi|13472463|ref|NP_104030.1| hypothetical protein mlr2767 [Mesorhizobium loti MAFF303099] gi|14023209|dbj|BAB49816.1| mlr2767 [Mesorhizobium loti MAFF303099] Length=153 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/154 (56%), Positives = 110/154 (72%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 ++ LLALLIGV+AGLR++TAPA V+W A+LGW+ + TWAS+M ++ V I ++LA+ EL Sbjct 1 MLYLLALLIGVIAGLRAMTAPAAVAWGAYLGWLPVASTWASFMSHWAAVGIFTILAIVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 V D+ P TP R V F R+I+GAF GAVIG G GGL AG IGAV+GT GG +AR Sbjct 61 VTDQLPSTPSRKVPQQFGARVIMGAFTGAVIGATGGATIGGLIAGAIGAVIGTYGGAEAR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 RL AA G D P A +ED+VA++GG IVAA A Sbjct 121 GRLAAAF-GKDQPAAFIEDAVAIIGGLLIVAAVA 153 >gi|227819531|ref|YP_002823502.1| transmembrane protein [Sinorhizobium fredii NGR234] gi|227338530|gb|ACP22749.1| putative transmembrane protein [Sinorhizobium fredii NGR234] Length=153 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/145 (59%), Positives = 102/145 (71%), Gaps = 0/145 (0%) Query 4 VLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAE 63 + V +LALLIGVVAGLR +TAPA VS AA GW+ + +WA++MG T I +LA+ E Sbjct 1 MFVFVLALLIGVVAGLRVMTAPAAVSIAAAAGWLPVANSWAAFMGYRFTPYICCLLALVE 60 Query 64 LVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQA 123 V D+ P TP R V F RI+ G F GAV+GTA G GG AGVIGA+LGT+GGY+A Sbjct 61 YVTDQLPSTPSRKVPQQFGARIVSGGFCGAVLGTAGGSLVGGAVAGVIGAILGTLGGYEA 120 Query 124 RTRLVAARGGHDLPIALLEDSVAVL 148 R RLV A GG DLPIALLED VA+L Sbjct 121 RKRLVTAIGGKDLPIALLEDLVAIL 145 >gi|299138873|ref|ZP_07032050.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8] gi|298599027|gb|EFI55188.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8] Length=153 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 83/149 (56%), Positives = 105/149 (71%), Gaps = 1/149 (0%) Query 6 VLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELV 65 V++LALLIGV+AGLR+ TAP VSWAA G + L GT +++GN +TV I+++LA+ ELV Sbjct 3 VIILALLIGVIAGLRAFTAPTAVSWAARCGLLPLAGTHLAFLGNLITVCILTLLALFELV 62 Query 66 NDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQART 125 NDK PKTP R P F RI+ GAF+GA IG G W G+ G IGAV+GT+GG R Sbjct 63 NDKLPKTPSRKAPPSFIARIVFGAFSGAAIGLGVGSVWTGMVCGAIGAVIGTLGGAAVRG 122 Query 126 RLVAARGGHDLPIALLEDSVAVLGGFAIV 154 L AA G DLP ALLED+VA++G + IV Sbjct 123 ALAAAF-GKDLPAALLEDAVAIVGSYLIV 150 >gi|120404441|ref|YP_954270.1| 17 kDa surface antigen [Mycobacterium vanbaalenii PYR-1] gi|119957259|gb|ABM14264.1| 17 kDa surface antigen [Mycobacterium vanbaalenii PYR-1] Length=160 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/134 (51%), Positives = 94/134 (71%), Gaps = 0/134 (0%) Query 17 AGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVNDKRPKTPPRT 76 AG R+LTAPAVV+W A LGWI++ W+ WM + +TV ++++ A+ ELV D+ P TP R Sbjct 17 AGSRALTAPAVVAWGAMLGWIDVADKWSEWMAHPITVTVLTIFALGELVTDQLPMTPSRK 76 Query 77 VTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRLVAARGGHDL 136 V P F R+I G F+GAVIG+A+ + + GAGV+GAVLGT+ G + R+R A+GG+D Sbjct 77 VPPQFIARLITGGFSGAVIGSAFFHTFSATGAGVVGAVLGTLAGAELRSRFAGAKGGNDR 136 Query 137 PIALLEDSVAVLGG 150 P A ED +AV GG Sbjct 137 PGAFTEDVLAVGGG 150 >gi|320107299|ref|YP_004182889.1| putative transmembrane protein [Terriglobus saanensis SP1PR4] gi|319925820|gb|ADV82895.1| putative transmembrane protein [Terriglobus saanensis SP1PR4] Length=155 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/149 (54%), Positives = 99/149 (67%), Gaps = 0/149 (0%) Query 6 VLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELV 65 +++LA IGVVAGLR+LT A VSWAA GW+ L G+W ++MG T ++S+LA+ EL Sbjct 3 LIVLAFFIGVVAGLRALTPLAAVSWAARFGWLPLGGSWLAFMGYTWTPWVLSLLALGELF 62 Query 66 NDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQART 125 NDK PKTP R V FA RI+ GA AGA G A G AG +GAV GT+GG +AR+ Sbjct 63 NDKLPKTPSRKVPAQFATRIVTGAVAGAAFGIATSSSIVGAIAGALGAVAGTLGGAEARS 122 Query 126 RLVAARGGHDLPIALLEDSVAVLGGFAIV 154 RL A GG DLPIALLED + V+ IV Sbjct 123 RLTNAIGGKDLPIALLEDFITVMSALLIV 151 >gi|116623320|ref|YP_825476.1| hypothetical protein Acid_4229 [Candidatus Solibacter usitatus Ellin6076] gi|116226482|gb|ABJ85191.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length=153 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 77/151 (51%), Positives = 99/151 (66%), Gaps = 1/151 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + +L A LIGVVAGLR+LTAP VSWAA L W++L GT ++MG T I +VLA+ EL Sbjct 3 ICVLFAFLIGVVAGLRALTAPTAVSWAAALRWLHLEGTPLAFMGYAATPYIFTVLAIGEL 62 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 ++D+ P TP R P F RI+ G GA G + AGV+GAV GT+GGY+AR Sbjct 63 ISDQLPNTPSRKAPPGFIARIVTGGLCGAAFGFQRDEVVPCVIAGVLGAVAGTLGGYEAR 122 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVA 155 RL A G DLPIALLED++A+ G F +V+ Sbjct 123 VRLARAV-GRDLPIALLEDAIAIGGAFFLVS 152 >gi|169630096|ref|YP_001703745.1| hypothetical protein MAB_3013 [Mycobacterium abscessus ATCC 19977] gi|169242063|emb|CAM63091.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=160 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/150 (54%), Positives = 99/150 (66%), Gaps = 5/150 (3%) Query 10 ALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVNDKR 69 ALLIG+VAGLR++T AV+SWAAF + L GTWAS++ + V +I +VLA E+VNDK Sbjct 8 ALLIGIVAGLRAMTPLAVLSWAAFAKCLLLEGTWASFLASLVVAIIATVLAAGEIVNDKL 67 Query 70 PKTPPRTVTPVFAVRIILGAFAGAVIGT-AWGYRWG---GLGAGVIGAVLGTMGGYQART 125 PKTP R P FA R++LGAF GAV GT A G GL G IGAV+GT+GG AR Sbjct 68 PKTPSRKAPPAFAARMVLGAFYGAVFGTLAHDTSPGLLIGLVLGAIGAVIGTLGGAWARG 127 Query 126 RLVAARGGHDLPIALLEDSVAVLGGFAIVA 155 L A G DLP AL+ED++ V AI A Sbjct 128 ALATAF-GKDLPAALIEDAITVAAALAITA 156 >gi|295689302|ref|YP_003592995.1| hypothetical protein Cseg_1904 [Caulobacter segnis ATCC 21756] gi|295431205|gb|ADG10377.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length=154 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 79/150 (53%), Positives = 102/150 (68%), Gaps = 1/150 (0%) Query 8 LLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVND 67 + ALLIGV+AGLR++TAPA VSWAA LGW+ L G +W+G V+I +VLA ELV+D Sbjct 5 VFALLIGVIAGLRAMTAPAAVSWAARLGWLPLAGWPLAWLGGLTAVLIFTVLAALELVSD 64 Query 68 KRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRL 127 + P+TP R V F RI GAF+GA + G+ G G +GAV+GT+GG + R RL Sbjct 65 QLPQTPSRKVPIQFGTRIAAGAFSGAALMMPSGHWLRGAVIGAVGAVIGTLGGAEVRGRL 124 Query 128 VAARGGHDLPIALLEDSVAVLGGFAIVAAA 157 AAR G D P AL+ED++A+ G FAIVA A Sbjct 125 -AARFGADRPAALIEDAIAIGGAFAIVALA 153 >gi|209546213|ref|YP_002278103.1| hypothetical protein Rleg2_5830 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539070|gb|ACI59003.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length=153 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/154 (56%), Positives = 106/154 (69%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV++GLR++TAPA V+W A LGW +L T ++MG T I ++LAV EL Sbjct 1 MFLLLALLIGVISGLRTMTAPAAVAWGAALGWFDLSQTPLAFMGYRWTPWIFTILAVTEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 V D+ P TP R V F RI+ GA +GA IG A G +GGL AGVIGAV+GT GG AR Sbjct 61 VADQLPSTPSRKVPMQFGARIVSGALSGAAIGAASGLLFGGLIAGVIGAVIGTFGGAAAR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 +RL A G DLP AL+ED+VAV+G IV A A Sbjct 121 SRL-AVSFGKDLPAALIEDAVAVIGAVLIVGAVA 153 >gi|335035823|ref|ZP_08529154.1| hypothetical protein AGRO_3154 [Agrobacterium sp. ATCC 31749] gi|333792739|gb|EGL64105.1| hypothetical protein AGRO_3154 [Agrobacterium sp. ATCC 31749] Length=153 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/143 (50%), Positives = 97/143 (68%), Gaps = 1/143 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 +++LL++LIG VAGLR++TAPA ++W A+LGW+++ T S+MG+ + +I ++LAVAEL Sbjct 1 MLILLSILIGTVAGLRAMTAPAAIAWGAYLGWLDISQTGLSFMGSLWSAMIFTLLAVAEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F I +GA +GA IG GL GVIGAV+GT+GG R Sbjct 61 ITDQLPSTPSRKVPMQFGAHISMGALSGAAIGATGNTVVIGLITGVIGAVIGTLGGASVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAV 147 L A R G DLP ALLED+ AV Sbjct 121 AYL-ANRFGRDLPAALLEDAFAV 142 >gi|16119769|ref|NP_396475.1| hypothetical protein Atu5538 [Agrobacterium tumefaciens str. C58] gi|15162365|gb|AAK90916.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length=153 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/143 (49%), Positives = 95/143 (67%), Gaps = 1/143 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 +++LL++LIG VAGLR++TAP ++W A+LGW+++ T S+MG+ +I ++LAV EL Sbjct 1 MLILLSILIGTVAGLRAMTAPTAIAWGAYLGWLDISQTGLSFMGSLWAAMIFTLLAVTEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F RI +GA +GA IG GL GVIGAV+GT+GG R Sbjct 61 ITDQLPSTPSRKVPMQFGARISMGALSGAAIGATGNTVVIGLITGVIGAVIGTLGGASVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAV 147 L A R G DLP ALLED+ AV Sbjct 121 AYL-ANRFGRDLPAALLEDAFAV 142 >gi|218673124|ref|ZP_03522793.1| putative transmembrane protein [Rhizobium etli GR56] Length=153 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/152 (56%), Positives = 105/152 (70%), Gaps = 1/152 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV++GLR++TAPA V+W A LGW ++ T ++MG T I +VLA+ EL Sbjct 1 MFLLLALLIGVISGLRAMTAPAAVAWGAALGWFDVSQTPLAFMGYRWTPWIFTVLAIVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F+ RI+ GA AGA IG A G +GGL AGVIGAV+GT GG R Sbjct 61 ITDQLPSTPSRKVPVQFSARIVTGALAGATIGAASGLLFGGLIAGVIGAVIGTYGGAAVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAA 156 RL AA G DLP AL+ED+VAV+G IV A Sbjct 121 ARL-AASFGKDLPAALIEDAVAVVGAALIVVA 151 >gi|223938975|ref|ZP_03630861.1| conserved hypothetical protein [bacterium Ellin514] gi|223892402|gb|EEF58877.1| conserved hypothetical protein [bacterium Ellin514] Length=162 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/144 (52%), Positives = 93/144 (65%), Gaps = 3/144 (2%) Query 6 VLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELV 65 + ++AL +G+VAGLRSLTAPAV SWAA LGW+NLHGT ++MG +I ++LAV E V Sbjct 6 IFVIALGMGIVAGLRSLTAPAVTSWAAHLGWLNLHGTAVAFMGTLAAALIFTLLAVLEFV 65 Query 66 NDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGA--GVIGAVLGTMGGYQA 123 D PKTP RT RII+GA GA I A G LGA G IGA++G GYQA Sbjct 66 TDLLPKTPSRTKPGPLTARIIMGALCGACICAAAGQSL-ILGAVLGGIGAIIGAYSGYQA 124 Query 124 RTRLVAARGGHDLPIALLEDSVAV 147 RT+LV D+ +A+ ED VA+ Sbjct 125 RTKLVNRFHVKDVFVAIPEDIVAI 148 >gi|299139663|ref|ZP_07032836.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8] gi|298598287|gb|EFI54452.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8] Length=151 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/141 (50%), Positives = 91/141 (65%), Gaps = 1/141 (0%) Query 7 LLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVN 66 L++A ++G+ GLR+L A VSWAA G + L GTW +++G T I ++LAV ELV Sbjct 4 LIIAFVVGIACGLRALMGLAAVSWAASSGKLPLQGTWLAFLGFRATPFITTLLAVGELVT 63 Query 67 DKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTR 126 DK PKTP R V P F R+ +GA GA IG A G+ G AG++G+VLGT+GG +AR Sbjct 64 DKLPKTPSRLVPPQFGARVSMGALTGAAIGAANGHLLMGALAGIVGSVLGTLGGSKARAA 123 Query 127 LVAARGGHDLPIALLEDSVAV 147 A G DLP ALLED VA+ Sbjct 124 -AAKLFGRDLPAALLEDVVAI 143 >gi|241666660|ref|YP_002984744.1| hypothetical protein Rleg_6743 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862117|gb|ACS59782.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length=153 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/154 (55%), Positives = 104/154 (68%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV+AGLR++TAPA V+W A LGW ++ T ++MG T I ++LA+ EL Sbjct 1 MFLLLALLIGVIAGLRTMTAPAAVAWGAALGWFDVSQTPLAFMGYQWTPWIFTLLAIVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F RI+ GA AGA IG A +GGL AGVIGAV+GT GG R Sbjct 61 IADQLPTTPSRKVPMQFGARIVSGALAGATIGAASSLLFGGLIAGVIGAVIGTYGGATVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 RL AA G DLP AL+ED+VAV+G IV A A Sbjct 121 GRL-AASFGKDLPAALIEDAVAVIGAVLIVGAVA 153 >gi|116255586|ref|YP_771419.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115260234|emb|CAK03338.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length=153 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 85/154 (56%), Positives = 103/154 (67%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV+AGLR++TAPA V+W A LGW ++ T + MG T I ++LAV EL Sbjct 1 MFLLLALLIGVIAGLRAMTAPAAVAWGAALGWFDVSQTPLAIMGYQWTPWIFTLLAVVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F RI+ GA AGA IG A +GGL AGVIGAV+GT GG R Sbjct 61 ITDQLPSTPSRKVPVQFGARIVTGALAGATIGAASSLLFGGLIAGVIGAVIGTYGGAAVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 RL AA G DLP AL+ED+VAV+G IV A A Sbjct 121 GRL-AASFGKDLPAALIEDAVAVIGAVLIVGAVA 153 >gi|225872430|ref|YP_002753885.1| hypothetical protein ACP_0769 [Acidobacterium capsulatum ATCC 51196] gi|225791365|gb|ACO31455.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC 51196] Length=154 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 71/149 (48%), Positives = 93/149 (63%), Gaps = 1/149 (0%) Query 7 LLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVN 66 L+ A ++GV GLR+L A VSWAA + L GTW S++GN +T I SVLA+ E++N Sbjct 4 LIAAFVLGVACGLRALVGLAAVSWAASGQHLPLQGTWVSFLGNRITSYISSVLAIGEIIN 63 Query 67 DKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTR 126 DK PKTP R V P F RI++GA G+ IG + G G G+IG+V+GT+ G + R Sbjct 64 DKFPKTPSRLVPPQFGARIVIGALTGSAIGLSQGNPVMGALVGIIGSVVGTLAGAKGRA- 122 Query 127 LVAARGGHDLPIALLEDSVAVLGGFAIVA 155 L A G DLP ALLED +AV F +A Sbjct 123 LAAKLFGRDLPAALLEDVLAVALAFVAIA 151 >gi|218659270|ref|ZP_03515200.1| hypothetical protein RetlI_06186 [Rhizobium etli IE4771] Length=153 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/150 (56%), Positives = 102/150 (68%), Gaps = 1/150 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV++GLR++TAPA V+W A LGW+++ T ++MG T I ++LAV EL Sbjct 1 MFLLLALLIGVISGLRTMTAPAAVAWGAALGWLDVSQTPLAFMGYRWTPWIFTLLAVVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 V D+ P TP R V FA RI GA GA IG A +GGL AGVIGAV+GT GG R Sbjct 61 VADQLPSTPSRKVPMQFAARIASGALVGATIGAASSLLFGGLIAGVIGAVIGTYGGAAVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIV 154 RL AA G DLP AL+ED+VAV+G IV Sbjct 121 ARL-AASFGRDLPAALIEDAVAVIGAALIV 149 >gi|167648951|ref|YP_001686614.1| hypothetical protein Caul_4996 [Caulobacter sp. K31] gi|167351381|gb|ABZ74116.1| conserved hypothetical protein [Caulobacter sp. K31] Length=154 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/150 (56%), Positives = 96/150 (64%), Gaps = 1/150 (0%) Query 8 LLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVND 67 L ALLIGVVAGLR++TAPA V+W A LG I L GT +W+G + + LAV ELV D Sbjct 5 LFALLIGVVAGLRAMTAPAAVAWGAHLGLIPLQGTPLAWLGGNIAPWTFTALAVLELVGD 64 Query 68 KRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRL 127 + PKTP R V F RI+ GAF GA IG G GG AG IGAVLGT+GG RTRL Sbjct 65 QLPKTPSRKVPVQFGTRIVSGAFCGAAIGMVGGAWIGGAVAGAIGAVLGTLGGADVRTRL 124 Query 128 VAARGGHDLPIALLEDSVAVLGGFAIVAAA 157 A G DLP L+ED+VAV G IV AA Sbjct 125 AKAF-GKDLPAGLIEDAVAVGGAALIVMAA 153 >gi|86360545|ref|YP_472433.1| hypothetical protein RHE_PE00271 [Rhizobium etli CFN 42] gi|86284647|gb|ABC93706.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length=153 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/152 (52%), Positives = 101/152 (67%), Gaps = 1/152 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV++GLR++TAPA V+W A LGW ++ T ++MG I ++LA+ EL Sbjct 1 MFLLLALLIGVISGLRAMTAPAAVAWGAALGWFDVSQTPLAFMGYQWAPWIFTLLAIIEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F RI+ GA +GA IG A +GGL AGVIGAV+GT GG R Sbjct 61 ITDQLPSTPSRKVPVQFGARIVSGALSGATIGAASSLLFGGLIAGVIGAVVGTYGGAAVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAA 156 RL AA G DLP AL+ED+VAV+G I A Sbjct 121 GRLAAAF-GKDLPAALIEDAVAVIGAVLIAGA 151 >gi|298292018|ref|YP_003693957.1| transmembrane protein [Starkeya novella DSM 506] gi|296928529|gb|ADH89338.1| putative transmembrane protein [Starkeya novella DSM 506] Length=152 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 78/150 (52%), Positives = 100/150 (67%), Gaps = 1/150 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 ++ LLALLIGVVAGLR++TAPA V+WAA+LGWI+L + ++MG T I +VLAV EL Sbjct 1 MLYLLALLIGVVAGLRAMTAPAAVAWAAYLGWIDLSASPLAFMGYAWTPWIFTVLAVVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP RTV F RI+ GA GA +G A G G G IGAV+GT+GG R Sbjct 61 ITDQLPSTPSRTVPVQFGTRIVSGALCGACLGAASGNLVVGAVLGAIGAVIGTLGGRSVR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIV 154 L AA G D P A++ED+VA++G IV Sbjct 121 GSL-AASFGKDPPAAIIEDAVAIIGAALIV 149 >gi|190895531|ref|YP_001985823.1| hypothetical protein RHECIAT_PA0000216 [Rhizobium etli CIAT 652] gi|218508364|ref|ZP_03506242.1| hypothetical protein RetlB5_12654 [Rhizobium etli Brasil 5] gi|190699476|gb|ACE93560.1| hypothetical conserved protein [Rhizobium etli CIAT 652] gi|327189525|gb|EGE56680.1| hypothetical protein RHECNPAF_590022 [Rhizobium etli CNPAF512] Length=153 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 83/154 (54%), Positives = 104/154 (68%), Gaps = 1/154 (0%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV++GLR++TAPA V+W A LGW + T ++MG T I +VLA+ EL Sbjct 1 MFLLLALLIGVISGLRAMTAPAAVAWGAALGWFEVSQTPLAFMGYRWTPWIFTVLAIVEL 60 Query 65 VNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQAR 124 + D+ P TP R V F RI+ GA AGA IG A G +GGL AGVIGAV+GT GG R Sbjct 61 ITDQLPSTPSRKVPVQFGARIVTGALAGATIGAASGLFFGGLIAGVIGAVIGTYGGAALR 120 Query 125 TRLVAARGGHDLPIALLEDSVAVLGGFAIVAAAA 158 RL A+ G DLP AL+ED+VAV+G IV A + Sbjct 121 ARLAASF-GRDLPAALIEDAVAVIGAALIVGAVS 153 >gi|295700326|ref|YP_003608219.1| hypothetical protein BC1002_4743 [Burkholderia sp. CCGE1002] gi|295439539|gb|ADG18708.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length=163 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/156 (48%), Positives = 96/156 (62%), Gaps = 8/156 (5%) Query 6 VLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELV 65 V +LALLIGVVAGLR++ AP VSWAA LGW+ L GT +++G T I +VLAV EL+ Sbjct 3 VYVLALLIGVVAGLRAMIAPTAVSWAARLGWLPLQGTSLAFLGAAATPYIFTVLAVIELI 62 Query 66 NDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWG-------YRWGGLGAGVIGAVLGTM 118 D+ P+TP R V F R++LGA +GA I A G G G +GAV+GT+ Sbjct 63 TDQLPETPSRKVPLQFGARVVLGALSGAAISGAHGGLAGGVIVGVLGAVVGAVGAVIGTL 122 Query 119 GGYQARTRLVAARGGHDLPIALLEDSVAVLGGFAIV 154 GG + R+ L A G D P AL+ED VA++ IV Sbjct 123 GGAKVRSSL-ANMFGRDAPAALIEDVVAIVAAALIV 157 >gi|209520337|ref|ZP_03269102.1| conserved hypothetical protein [Burkholderia sp. H160] gi|209499211|gb|EDZ99301.1| conserved hypothetical protein [Burkholderia sp. H160] Length=163 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/156 (47%), Positives = 96/156 (62%), Gaps = 8/156 (5%) Query 6 VLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELV 65 V +LALLIGVVAGLR++ AP VSWA LGW+ L GT +++G T +++VLAV EL+ Sbjct 3 VYVLALLIGVVAGLRAMIAPTAVSWATRLGWLPLQGTPLAFLGFTATPYVLTVLAVIELI 62 Query 66 NDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGG-------LGAGVIGAVLGTM 118 D+ P+TP R V F RI+ GA +GA I A G GG G +GAV+GT+ Sbjct 63 TDQLPETPSRKVPLQFGARIVAGALSGAAISGAHGGLAGGSIVGVLGAVVGAVGAVIGTL 122 Query 119 GGYQARTRLVAARGGHDLPIALLEDSVAVLGGFAIV 154 GG + R+ L A G D P AL+ED VA++ IV Sbjct 123 GGAKVRSSL-ANVFGRDAPAALIEDVVAIVAAALIV 157 >gi|21233315|ref|NP_639232.1| hypothetical protein XCC3892 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770277|ref|YP_245039.1| hypothetical protein XC_3980 [Xanthomonas campestris pv. campestris str. 8004] gi|21115146|gb|AAM43114.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575609|gb|AAY51019.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length=154 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/134 (51%), Positives = 83/134 (62%), Gaps = 1/134 (0%) Query 10 ALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVNDKR 69 A L+GVVAGLR++ APA++SWAA LG ++L GT W+G T +VS+LA+ EL+ D+ Sbjct 7 AWLLGVVAGLRAMLAPALLSWAAALGHVHLAGTPLGWLGWRYTPWVVSLLALGELITDQL 66 Query 70 PKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRLVA 129 P TP R V F R++ GA G IG G G AGVIGAVLGT GG A VA Sbjct 67 PNTPSRKVPVQFLTRLLSGALCGGAIGLQAGQWMLGAAAGVIGAVLGTYGGAAA-RAAVA 125 Query 130 ARGGHDLPIALLED 143 R G D P LLED Sbjct 126 QRLGRDRPAGLLED 139 >gi|217979007|ref|YP_002363154.1| hypothetical protein Msil_2875 [Methylocella silvestris BL2] gi|217504383|gb|ACK51792.1| conserved hypothetical protein [Methylocella silvestris BL2] Length=153 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/141 (50%), Positives = 85/141 (61%), Gaps = 1/141 (0%) Query 8 LLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVND 67 LLA LIGVVAGLRS A AA G ++L G +++GN V I++ LA+AELV D Sbjct 5 LLAFLIGVVAGLRSFLPLAATGLAAHAGLLSLQGGPLAFLGNAVVAYILAGLALAELVAD 64 Query 68 KRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRL 127 K P+ P R F RI+ G+ GA IG G GGL AG +GAV GT+GG R RL Sbjct 65 KLPQIPNRKTPGPFVFRIVSGSVCGAAIGAQGGALVGGLIAGALGAVAGTLGGAAVRARL 124 Query 128 VAARGGHDLPIALLEDSVAVL 148 A G D P ALLED+VA+L Sbjct 125 ADAF-GRDWPAALLEDAVAIL 144 >gi|218515202|ref|ZP_03512042.1| hypothetical protein Retl8_16668 [Rhizobium etli 8C-3] Length=154 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 75/154 (49%), Positives = 92/154 (60%), Gaps = 4/154 (2%) Query 5 LVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAEL 64 + LLLALLIGV++GLR++TAPA V+W A LGW + T ++MG T I +VLA+ EL Sbjct 1 MFLLLALLIGVISGLRAMTAPAAVAWGAALGWFEVSQTPLAFMGYRWTPWIFTVLAIVEL 60 Query 65 VNDKRPKTPPRTVTPVF--AVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQ 122 + D+ P TP R V F R A GGL AGVIGAV+GT GG Sbjct 61 ITDQLPSTPSRKVPVQFRRPYRHRGARRGDDRRPPA-ACSSGGLIAGVIGAVIGTYGGAA 119 Query 123 ARTRLVAARGGHDLPIALLEDSVAVLGGFAIVAA 156 R R VAA G DLP AL+ED+VAV+G IV A Sbjct 120 LRGR-VAASFGRDLPAALIEDAVAVIGAALIVGA 152 >gi|320109217|ref|YP_004184807.1| hypothetical protein AciPR4_4065 [Terriglobus saanensis SP1PR4] gi|319927738|gb|ADV84813.1| hypothetical protein AciPR4_4065 [Terriglobus saanensis SP1PR4] Length=167 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/142 (38%), Positives = 81/142 (58%), Gaps = 2/142 (1%) Query 8 LLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVND 67 LL LLIGV GLR++T AV+ W A+L + L G W + V+VV+ ++ A+ EL D Sbjct 7 LLVLLIGVCTGLRTMTPIAVICWFAYLHHLALTG-WRGYAAYLVSVVVFTLAALGELYGD 65 Query 68 KRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWG-GLGAGVIGAVLGTMGGYQARTR 126 K P T R P R++ + A++ + AG++GA++G+ GG+ RTR Sbjct 66 KLPNTASRLSPPGLGARVVFASLCAAILAQPLVLPLAVAIIAGIVGALVGSYGGWFVRTR 125 Query 127 LVAARGGHDLPIALLEDSVAVL 148 VAA D +A++ED+VA+L Sbjct 126 AVAALKCPDWNVAVVEDAVAIL 147 >gi|220923579|ref|YP_002498881.1| hypothetical protein Mnod_3670 [Methylobacterium nodulans ORS 2060] gi|219948186|gb|ACL58578.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length=154 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 69/137 (51%), Positives = 90/137 (66%), Gaps = 1/137 (0%) Query 7 LLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVN 66 ++LALLIG VAGLR++TAPA ++WAA LG++ L GT + +G T +++ LA+AE V Sbjct 4 IILALLIGSVAGLRTMTAPAAIAWAARLGFLPLGGTGLAVLGYRFTPFLLTALALAEFVT 63 Query 67 DKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTR 126 D+ P TP RTV R+ GA GA IG G GG+ AGV+GAV+GT+GG AR R Sbjct 64 DQLPSTPSRTVPVQCGARLASGALCGAAIGLPAGSLAGGIVAGVVGAVIGTLGGAAARGR 123 Query 127 LVAARGGHDLPIALLED 143 L AA G D P A +ED Sbjct 124 LAAAF-GRDRPAAFIED 139 >gi|188993477|ref|YP_001905487.1| hypothetical protein xccb100_4082 [Xanthomonas campestris pv. campestris str. B100] gi|167735237|emb|CAP53449.1| putative membrane protein [Xanthomonas campestris pv. campestris] Length=242 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 69/138 (50%), Positives = 85/138 (62%), Gaps = 1/138 (0%) Query 6 VLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELV 65 +L A L+GVVAGLR++ APA++SWAA LG ++L GT W+G T IVS+LA+ EL+ Sbjct 91 LLPAAWLLGVVAGLRAMLAPALLSWAAALGHVHLAGTPLGWLGWRYTPWIVSLLALGELI 150 Query 66 NDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQART 125 D+ P TP R V F R++ GA G IG G G AGV+GAVLGT GG A Sbjct 151 TDQLPNTPSRKVPVQFLTRLLSGALCGGAIGLQAGQWVLGAAAGVVGAVLGTYGGAAA-R 209 Query 126 RLVAARGGHDLPIALLED 143 VA R G D P LLED Sbjct 210 AAVAQRLGRDRPAGLLED 227 >gi|341935174|gb|AEL05313.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani 756C] Length=154 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 68/134 (51%), Positives = 82/134 (62%), Gaps = 1/134 (0%) Query 10 ALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNFVTVVIVSVLAVAELVNDKR 69 A L+GVVAGLR++ APA++SWAA LG + L GT W+G T IVS+LA+ EL+ D+ Sbjct 7 AWLLGVVAGLRAMLAPALLSWAAALGHVQLAGTPLGWLGWRYTPWIVSLLALGELITDQL 66 Query 70 PKTPPRTVTPVFAVRIILGAFAGAVIGTAWGYRWGGLGAGVIGAVLGTMGGYQARTRLVA 129 P TP R V F R++ GA G IG G G AGV+GAVLGT GG A VA Sbjct 67 PNTPSRKVPVQFLTRLLSGALCGGAIGLQAGQWVLGAAAGVVGAVLGTYGGAAA-RAAVA 125 Query 130 ARGGHDLPIALLED 143 R G D P LLED Sbjct 126 QRLGCDRPAGLLED 139 Lambda K H 0.326 0.140 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127750398496 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40