BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2123 Length=473 Score E Sequences producing significant alignments: (Bits) Value gi|57116948|ref|YP_177861.1| PPE family protein [Mycobacterium t... 926 0.0 gi|289447743|ref|ZP_06437487.1| PPE family protein [Mycobacteriu... 925 0.0 gi|340627132|ref|YP_004745584.1| PPE family protein [Mycobacteri... 924 0.0 gi|308232040|ref|ZP_07414707.2| PPE family protein [Mycobacteriu... 923 0.0 gi|31793303|ref|NP_855796.1| PPE family protein [Mycobacterium b... 829 0.0 gi|148823334|ref|YP_001288088.1| PPE family protein [Mycobacteri... 662 0.0 gi|289554091|ref|ZP_06443301.1| PPE family protein [Mycobacteriu... 655 0.0 gi|289745396|ref|ZP_06504774.1| PPE family protein [Mycobacteriu... 604 1e-170 gi|289758242|ref|ZP_06517620.1| PPE family protein [Mycobacteriu... 594 1e-167 gi|339295042|gb|AEJ47153.1| PPE family protein [Mycobacterium tu... 577 2e-162 gi|298525619|ref|ZP_07013028.1| PPE family protein [Mycobacteriu... 476 4e-132 gi|183983105|ref|YP_001851396.1| PPE family protein, PPE37 [Myco... 413 3e-113 gi|339295041|gb|AEJ47152.1| PPE family protein [Mycobacterium tu... 335 1e-89 gi|289758241|ref|ZP_06517619.1| PPE family protein [Mycobacteriu... 332 6e-89 gi|169627772|ref|YP_001701421.1| PPE-family protein [Mycobacteri... 214 4e-53 gi|317509538|ref|ZP_07967137.1| PPE family protein [Segniliparus... 213 4e-53 gi|240173305|ref|ZP_04751963.1| PPE family protein, PPE3 [Mycoba... 208 2e-51 gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycoba... 207 5e-51 gi|167968979|ref|ZP_02551256.1| PPE family protein [Mycobacteriu... 204 3e-50 gi|306801842|ref|ZP_07438510.1| PPE family protein [Mycobacteriu... 204 3e-50 gi|340625294|ref|YP_004743746.1| PPE family protein [Mycobacteri... 204 3e-50 gi|31791434|ref|NP_853927.1| PPE family protein [Mycobacterium b... 204 3e-50 gi|298523724|ref|ZP_07011133.1| ppe family protein [Mycobacteriu... 204 3e-50 gi|15839636|ref|NP_334673.1| PPE family protein [Mycobacterium t... 204 3e-50 gi|307082389|ref|ZP_07491559.1| PPE family protein [Mycobacteriu... 204 4e-50 gi|333989625|ref|YP_004522239.1| PPE family protein [Mycobacteri... 204 4e-50 gi|289748026|ref|ZP_06507404.1| PPE family protein [Mycobacteriu... 203 4e-50 gi|118619893|ref|YP_908225.1| PPE family protein [Mycobacterium ... 202 8e-50 gi|323717087|gb|EGB26297.1| PPE family protein [Mycobacterium tu... 202 1e-49 gi|306787247|ref|ZP_07425569.1| putative PPE family protein [Myc... 202 1e-49 gi|289760363|ref|ZP_06519741.1| PPE family protein [Mycobacteriu... 202 1e-49 gi|339296965|gb|AEJ49075.1| PPE family protein [Mycobacterium tu... 202 1e-49 gi|289756323|ref|ZP_06515701.1| PPE family protein [Mycobacteriu... 201 2e-49 gi|289748027|ref|ZP_06507405.1| PPE family protein [Mycobacteriu... 201 2e-49 gi|289445789|ref|ZP_06435533.1| PPE family protein [Mycobacteriu... 201 3e-49 gi|240172392|ref|ZP_04751051.1| PPE protein [Mycobacterium kansa... 197 3e-48 gi|183980812|ref|YP_001849103.1| PPE family protein [Mycobacteri... 197 3e-48 gi|333988934|ref|YP_004521548.1| PPE family protein [Mycobacteri... 196 6e-48 gi|296167571|ref|ZP_06849908.1| PPE family protein [Mycobacteriu... 195 1e-47 gi|118468729|ref|YP_885030.1| PPE family protein [Mycobacterium ... 195 1e-47 gi|169631856|ref|YP_001705505.1| PPE family protein [Mycobacteri... 193 5e-47 gi|41409823|ref|NP_962659.1| hypothetical protein MAP3725 [Mycob... 193 7e-47 gi|31791274|ref|NP_853767.1| PPE family protein [Mycobacterium b... 192 1e-46 gi|296165161|ref|ZP_06847709.1| PPE family protein [Mycobacteriu... 192 1e-46 gi|340625132|ref|YP_004743584.1| PPE family protein [Mycobacteri... 191 2e-46 gi|289441465|ref|ZP_06431209.1| PPE family protein [Mycobacteriu... 191 2e-46 gi|183980293|ref|YP_001848584.1| PPE family protein, PPE1 [Mycob... 191 2e-46 gi|289746824|ref|ZP_06506202.1| PPE family protein [Mycobacteriu... 191 3e-46 gi|339295852|gb|AEJ47963.1| PPE family protein [Mycobacterium tu... 191 3e-46 gi|57117045|ref|YP_177918.1| PPE family protein [Mycobacterium t... 191 3e-46 >gi|57116948|ref|YP_177861.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661938|ref|YP_001283461.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167967467|ref|ZP_02549744.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 35 more sequence titles Length=473 Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/473 (99%), Positives = 473/473 (100%), Gaps = 0/473 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW Sbjct 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 Query 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK Sbjct 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 Query 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA Sbjct 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 Query 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD Sbjct 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 >gi|289447743|ref|ZP_06437487.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289420701|gb|EFD17902.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=473 Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/473 (99%), Positives = 473/473 (100%), Gaps = 0/473 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GAL+TTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 121 GALMTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW Sbjct 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 Query 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK Sbjct 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 Query 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA Sbjct 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 Query 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD Sbjct 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 >gi|340627132|ref|YP_004745584.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005322|emb|CCC44479.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=473 Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/473 (99%), Positives = 472/473 (99%), Gaps = 0/473 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVE VHSDGPSRQSW Sbjct 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVESVHSDGPSRQSW 300 Query 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK Sbjct 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 Query 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA Sbjct 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 Query 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD Sbjct 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 >gi|308232040|ref|ZP_07414707.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308379125|ref|ZP_07485142.2| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308380275|ref|ZP_07489361.2| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215216|gb|EFO74615.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308358092|gb|EFP46943.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308362026|gb|EFP50877.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=473 Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/473 (99%), Positives = 472/473 (99%), Gaps = 0/473 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAG TSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGNTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW Sbjct 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 Query 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK Sbjct 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 Query 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA Sbjct 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 Query 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD Sbjct 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 >gi|31793303|ref|NP_855796.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638005|ref|YP_978229.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990499|ref|YP_002645186.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618895|emb|CAD97000.1| conserved hypothetical protein, PPE [Mycobacterium bovis AF2122/97] gi|121493653|emb|CAL72128.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773612|dbj|BAH26418.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602043|emb|CCC64717.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=464 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/473 (98%), Positives = 463/473 (98%), Gaps = 9/473 (1%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAA QYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAA---------QYTEIATELASVLAAVQASSW 51 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 52 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 111 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 112 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 171 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAAS SFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 172 AASSAASISFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 231 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW Sbjct 232 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 291 Query 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 360 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK Sbjct 292 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNPIAK 351 Query 361 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 420 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA Sbjct 352 TTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTPEMA 411 Query 421 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD Sbjct 412 DVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 464 >gi|148823334|ref|YP_001288088.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253798815|ref|YP_003031816.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254551155|ref|ZP_05141602.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 9 more sequence titles Length=496 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/339 (99%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW Sbjct 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSW 300 Query 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS 339 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS Sbjct 301 PAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS 339 >gi|289554091|ref|ZP_06443301.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289438723|gb|EFD21216.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=492 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 5 MWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPS 64 MWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPS Sbjct 1 MWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPS 60 Query 65 ADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALV 124 ADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALV Sbjct 61 ADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALV 120 Query 125 TTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASS 184 TTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASS Sbjct 121 TTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASS 180 Query 185 AASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVFTFLA 244 AASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVFTFLA Sbjct 181 AASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVFTFLA 240 Query 245 YLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSWPAAT 304 YLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSWPAAT Sbjct 241 YLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSRQSWPAAT 300 Query 305 GVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS 339 GVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS Sbjct 301 GVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS 335 >gi|289745396|ref|ZP_06504774.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289685924|gb|EFD53412.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|326903738|gb|EGE50671.1| PPE family protein [Mycobacterium tuberculosis W-148] Length=468 Score = 604 bits (1557), Expect = 1e-170, Method: Compositional matrix adjust. Identities = 313/374 (84%), Positives = 324/374 (87%), Gaps = 9/374 (2%) Query 100 YTSALGGMPTLAELAANHAMHGALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQA 159 Y S +GG P A + +H + + +P ++ + + + Sbjct 104 YASRVGGQPCHARRSGDHQLLRCQHHPDRPQRGRLPAHVDPGRHRHEPLSSRRARKR--- 160 Query 160 VAHESVAATPSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGP 219 PSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGP Sbjct 161 ------GGDPSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGP 214 Query 220 LGDLIAQVLDWFISFVSGPVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAV 279 LGDLIAQVLDWFISFVSGPVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAV Sbjct 215 LGDLIAQVLDWFISFVSGPVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAV 274 Query 280 SGPAGPMVERVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS 339 SGPAGPMVERVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS Sbjct 275 SGPAGPMVERVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSS 334 Query 340 AAQGLYAVGGPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQ 399 AAQGLYAVGGPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQ Sbjct 335 AAQGLYAVGGPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQ 394 Query 400 HRFEFLADDGRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADV 459 HRFEFLADDGRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADV Sbjct 395 HRFEFLADDGRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADV 454 Query 460 LSQPMLPHTWDGSD 473 LSQPMLPHTWDGSD Sbjct 455 LSQPMLPHTWDGSD 468 >gi|289758242|ref|ZP_06517620.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289713806|gb|EFD77818.1| PPE family protein [Mycobacterium tuberculosis T85] Length=327 Score = 594 bits (1532), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 305/305 (100%), Positives = 305/305 (100%), Gaps = 0/305 (0%) Query 169 PSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVL 228 PSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVL Sbjct 23 PSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVL 82 Query 229 DWFISFVSGPVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVE 288 DWFISFVSGPVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVE Sbjct 83 DWFISFVSGPVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVE 142 Query 289 RVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVG 348 RVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVG Sbjct 143 RVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVG 202 Query 349 GPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADD 408 GPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADD Sbjct 203 GPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADD 262 Query 409 GRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHT 468 GRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHT Sbjct 263 GRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHT 322 Query 469 WDGSD 473 WDGSD Sbjct 323 WDGSD 327 >gi|339295042|gb|AEJ47153.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] gi|339298664|gb|AEJ50774.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=296 Score = 577 bits (1486), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 295/296 (99%), Positives = 296/296 (100%), Gaps = 0/296 (0%) Query 178 VTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSG 237 +TSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSG Sbjct 1 MTSAASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSG 60 Query 238 PVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSR 297 PVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSR Sbjct 61 PVFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMVERVHSDGPSR 120 Query 298 QSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNP 357 QSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNP Sbjct 121 QSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNP 180 Query 358 IAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTP 417 IAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTP Sbjct 181 IAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTP 240 Query 418 EMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 473 EMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD Sbjct 241 EMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPHTWDGSD 296 >gi|298525619|ref|ZP_07013028.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298495413|gb|EFI30707.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=250 Score = 476 bits (1225), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 241/242 (99%), Positives = 242/242 (100%), Gaps = 0/242 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF Sbjct 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 Query 241 TF 242 TF Sbjct 241 TF 242 >gi|183983105|ref|YP_001851396.1| PPE family protein, PPE37 [Mycobacterium marinum M] gi|183176431|gb|ACC41541.1| PPE family protein, PPE37 [Mycobacterium marinum M] Length=479 Score = 413 bits (1062), Expect = 3e-113, Method: Compositional matrix adjust. Identities = 264/477 (56%), Positives = 317/477 (67%), Gaps = 4/477 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFP+WFA+PPEV S LSTG GP L +AA AW ALA QYT+I+ EL +LAAV+A SW Sbjct 1 MTFPIWFALPPEVHSTLLSTGPGPSALWSAAAAWRALATQYTDISDELTQLLAAVRAGSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 G +A+RFV AHQPF WL AA VA AAA AHE+AAAGYTSAL MPTLAELA NHA+H Sbjct 61 DGSTAERFVAAHQPFLDWLAQAAAVANAAATAHESAAAGYTSALAAMPTLAELATNHAVH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALV TNFFG+NTIPIA NE+DY+RMW+QAA M+ YQAV+ SV ATP T PAPQI+T+ Sbjct 121 GALVATNFFGINTIPIAFNESDYMRMWVQAAITMTGYQAVSQHSVTATPRTSPAPQIMTA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A+ AA+SS PDP K+ILQ L+ FL LR LA E L GPL + VLD FISF SG VF Sbjct 181 DAAPAATSSMPDPVKIILQALQGFLNFLRNLAAETLSGPLEKFVVHVLDSFISFASGSVF 240 Query 241 TFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGP---AGPMVERVHSDGPSR 297 F+AY VLDP+IYFGPF P SP+ LPA GLAGL +S P A P+ S P+ Sbjct 241 KFVAYAVLDPMIYFGPFTPAISPLGLPAVTVGLAGLACISTPPQTAPPLPGVAQSGPPNH 300 Query 298 QSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQGLYAVGGPDGEGFNP 357 Q PA TGV + G + A V P +AAP+ PS+ G AAQ YAV GPDG G P Sbjct 301 QISPAITGVAVAGVSSGATVAGATPTAHAAAAPSGPSSAGPVAAQSFYAVLGPDGGGRTP 360 Query 358 IAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPNTP 417 ALAG T DA APAA+LPGDQA++++ +A ++RLRQ+R+EFL DG T + P Sbjct 361 TTNGKALAGATADAVAPAARLPGDQARATSRRARTAQKRLRQYRYEFLDADGYPTTVDPP 420 Query 418 EMADVAAGNRGLDALGFAGTIPKSAPGSATGLTH-LGGGFADVLSQPMLPHTWDGSD 473 A G +A F+ I K+ G LT FA+ + PMLP TW +D Sbjct 421 AAEPSAVSEHGANASEFSREISKTIAGQPDRLTAGRETRFAETTTLPMLPRTWTDAD 477 >gi|339295041|gb|AEJ47152.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] gi|339298663|gb|AEJ50773.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=176 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 168/170 (99%), Positives = 170/170 (100%), Gaps = 0/170 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPS 170 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATP+ Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPA 170 >gi|289758241|ref|ZP_06517619.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289713805|gb|EFD77817.1| PPE family protein [Mycobacterium tuberculosis T85] Length=176 Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 167/170 (99%), Positives = 169/170 (99%), Gaps = 0/170 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +TFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW Sbjct 1 MTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH Sbjct 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPS 170 GALVTTNFFGVNTIPIALNEADYLRMWIQ ATVMSHYQAVAHESVAATP+ Sbjct 121 GALVTTNFFGVNTIPIALNEADYLRMWIQGATVMSHYQAVAHESVAATPA 170 >gi|169627772|ref|YP_001701421.1| PPE-family protein [Mycobacterium abscessus ATCC 19977] gi|169239739|emb|CAM60767.1| Hypothetical PPE-family protein [Mycobacterium abscessus] Length=468 Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 182/494 (37%), Positives = 235/494 (48%), Gaps = 57/494 (11%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS G GPG +LAAA W + Y A ELA VLA V+A SW Sbjct 1 MTAPIWMAEPPEVHSALLSAGPGPGAVLAAAVQWQEIGNNYANTAVELAQVLAGVRAGSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA +V AH P+ WL AA ++ AA HET AA Y SAL MPTLAELAANH H Sbjct 61 QGPSASEYVAAHLPYLAWLEQAAAESSVIAAQHETTAAAYNSALAAMPTLAELAANHITH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G LV TNFFG+NTIPIALNEADY+RMW+QAA MS YQA +A P T P I++ Sbjct 121 GVLVGTNFFGINTIPIALNEADYVRMWVQAAATMSAYQATTEAMTSAIPPTQQPPAILSP 180 Query 181 AASSAA-SSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGP- 238 + + S P I+++L+ F + WF P Sbjct 181 GGEARSDQSDVPGSPDQIMKMLQGFQQ-----------------------WFEKMGFNPA 217 Query 239 ---VFTFLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGA----------------V 279 V + + D L+++ +A P L+PA L+GL+GL A + Sbjct 218 TSAVLAVIMLFLYD-LLWYPYYASYLLPFLIPA-LSGLSGLAALMHLRPAAPGPVPAAAL 275 Query 280 SGPAGPMVERVHSDGPSRQSWPAATGVTLVGTNPAALVTTP-APAPTTSAAPTAPSTPGS 338 S P+ P+ + P T + + V+TP APA T S+ P APS S Sbjct 276 SPGDRPIRRPTQHVEPNLAALPLPTSSVVPSGGSSVPVSTPTAPAHTVSSVP-APSAAIS 334 Query 339 SAAQGLYAVGGPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLR 398 A GL P G F P K+T + + A + A + R + + Sbjct 335 YAIPGLV----PPGVSFGP--KSTEKSSESAVDTVAAVAAARGAVAAQARRRLRGKNKAE 388 Query 399 Q--HRFEFLADDGRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGF 456 R E+L + + T ++ AA RG LGFAGT P +A L Sbjct 389 AGGRRHEYLEETAGMGATATADVPAYAATGRGTGPLGFAGTAPAAASTHVAATVRLSSDE 448 Query 457 ADVLSQPMLPHTWD 470 A + PMLP TWD Sbjct 449 ARQVI-PMLPSTWD 461 >gi|317509538|ref|ZP_07967137.1| PPE family protein [Segniliparus rugosus ATCC BAA-974] gi|316252166|gb|EFV11637.1| PPE family protein [Segniliparus rugosus ATCC BAA-974] Length=310 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 130/265 (50%), Positives = 175/265 (67%), Gaps = 3/265 (1%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 V+ P+WFA PPE S+ LS G GPG LLAAA LA QY + +L+ L V++ W Sbjct 3 VSAPIWFAFPPETHSSLLSAGPGPGSLLAAAGQMQTLAEQYVDAQAQLSEQLGLVRSGLW 62 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 +G +ADRFV A+QPF WL AA A AA+A +E AAGY +AL MPTL ELAANHA H Sbjct 63 EGEAADRFVAAYQPFLAWLGEAAATAVAASARYEDVAAGYAAALAAMPTLGELAANHAAH 122 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 L +TNF G+NT+PIALNEADY+RMWIQA M+ YQ+V +++A PSTPPAP ++ + Sbjct 123 ALLESTNFLGINTVPIALNEADYVRMWIQAGETMTAYQSVVEQNLATMPSTPPAPSVLAA 182 Query 181 AASSAASS---SFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSG 237 A S DP K + + L++F++ + LA +LP PL +++ Q+++ SF+ G Sbjct 183 EGGGAGESPEGGSTDPVKWLNKQLQEFVKKIGDLADSILPAPLANVVGQIVNSMSSFLGG 242 Query 238 PVFTFLAYLVLDPLIYFGPFAPLTS 262 VF +++ VLDP+IY PFAPL S Sbjct 243 QVFNIVSHAVLDPVIYGAPFAPLLS 267 >gi|240173305|ref|ZP_04751963.1| PPE family protein, PPE3 [Mycobacterium kansasii ATCC 12478] Length=523 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 127/211 (61%), Positives = 154/211 (73%), Gaps = 7/211 (3%) Query 3 FPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQG 62 +P+W A PPEV SA LS+G GPG LL+AA AW AL+A+Y A EL VL AVQ +W+G Sbjct 2 WPVWMASPPEVHSALLSSGPGPGSLLSAAAAWSALSAEYGTAADELMVVLGAVQGGAWEG 61 Query 63 PSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGA 122 PSA+R+V AH P+ WL A TV+ AAAA HET AA Y+SALG MPTLAELAANHA+HG Sbjct 62 PSAERYVAAHVPYLMWLMQAGTVSAAAAARHETVAAAYSSALGAMPTLAELAANHAIHGV 121 Query 123 LVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAA 182 LV TNFFG+NTIPIALNEADY+RMWIQAAT M+ Y+AV+ +VA+TP T PAPQIVT+ A Sbjct 122 LVATNFFGINTIPIALNEADYVRMWIQAATTMATYEAVSGAAVASTPQTSPAPQIVTAEA 181 Query 183 SSAASSSF-PDPTKLILQLLKDFL-ELLRYL 211 DPT + +F+ E+LR + Sbjct 182 DDGHDHEHGGDPTP-----IDNFVAEVLRII 207 >gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycobacterium kansasii ATCC 12478] Length=420 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 126/270 (47%), Positives = 164/270 (61%), Gaps = 26/270 (9%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV S+ LS+G GPGPLL AA +W +++A+Y +A EL ++L VQ +W Sbjct 1 MTAPVWIASPPEVHSSLLSSGPGPGPLLVAAASWTSISAEYASVAEELTALLGGVQIGAW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 +GPSA+ F AH P+ WL A+ + AA HE AA YT AL MPTL ELAANHA+H Sbjct 61 RGPSAEVFAAAHVPYLAWLLRASADSAGVAAQHEVAATAYTGALAAMPTLPELAANHAVH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVT- 179 L+ TNFFG+NTIPIALNE DYLRMWIQAAT MS Y A ++A+ P PAP +V Sbjct 121 AVLLATNFFGINTIPIALNEGDYLRMWIQAATAMSIYHAAVDTALASVPHATPAPPLVKP 180 Query 180 -------SAASSAASSSFPDPTKLILQLLKDFLELLRYLAVEL---------LPGPLGDL 223 +AA+S S+ P LI LLK+ E YLA + L P+G+L Sbjct 181 GVGSAGDAAATSVQSAVGDIPWNLIWALLKEVAE--AYLAFNVWVLKEDALFLQDPIGNL 238 Query 224 IAQVLDWFISFVSGPVFTFLAYLVLDPLIY 253 Q+L+ +F + P F A L P+I+ Sbjct 239 W-QMLN---AFWTNP---FNALLQWGPMIF 261 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/45 (56%), Positives = 26/45 (58%), Gaps = 1/45 (2%) Query 427 RGLDALGFAGTIPKSAPGSATGLTHLGGGFA-DVLSQPMLPHTWD 470 RG ALGF GT K A G GLT LG + DV PMLP TWD Sbjct 362 RGAAALGFPGTAGKEAAGEPGGLTRLGDQESGDVARAPMLPATWD 406 >gi|167968979|ref|ZP_02551256.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=577 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 >gi|306801842|ref|ZP_07438510.1| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308351404|gb|EFP40255.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=555 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 39/83 (47%), Gaps = 12/83 (14%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGN-RGLDALGFAGTIPKSAPGSATG 448 R R +++Q +E+L D PE G+ +G LGFAGT K++PG G Sbjct 473 RRRPKIKQLGRGYEYLDLD--------PETGHDPTGSPQGAGTLGFAGTTHKASPGQVAG 524 Query 449 LTHL-GGGFADVLSQPMLPHTWD 470 L L F PM+P TWD Sbjct 525 LITLPNDAFGGSPRTPMMPGTWD 547 >gi|340625294|ref|YP_004743746.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003484|emb|CCC42604.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=556 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 39/83 (47%), Gaps = 12/83 (14%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGN-RGLDALGFAGTIPKSAPGSATG 448 R R +++Q +E+L D PE G+ +G LGFAGT K++PG G Sbjct 474 RRRPKIKQLGRGYEYLDLD--------PETGHDPTGSPQGAGTLGFAGTTHKASPGQVAG 525 Query 449 LTHL-GGGFADVLSQPMLPHTWD 470 L L F PM+P TWD Sbjct 526 LITLPNDAFGGSPRTPMMPGTWD 548 >gi|31791434|ref|NP_853927.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116708|ref|YP_177704.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121636169|ref|YP_976392.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 38 more sequence titles Length=556 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 39/83 (47%), Gaps = 12/83 (14%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGN-RGLDALGFAGTIPKSAPGSATG 448 R R +++Q +E+L D PE G+ +G LGFAGT K++PG G Sbjct 474 RRRPKIKQLGRGYEYLDLD--------PETGHDPTGSPQGAGTLGFAGTTHKASPGQVAG 525 Query 449 LTHL-GGGFADVLSQPMLPHTWD 470 L L F PM+P TWD Sbjct 526 LITLPNDAFGGSPRTPMMPGTWD 548 >gi|298523724|ref|ZP_07011133.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|298493518|gb|EFI28812.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=556 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/82 (36%), Positives = 38/82 (47%), Gaps = 10/82 (12%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGL 449 R R +++Q +E+L D P T D +G LGFAGT K++PG GL Sbjct 474 RRRPKIKQLGRGYEYLDLD-----PETDH--DPTGSPQGAGTLGFAGTTHKASPGQVAGL 526 Query 450 THL-GGGFADVLSQPMLPHTWD 470 L F PM+P TWD Sbjct 527 ITLPNDAFGGSPRTPMMPGTWD 548 >gi|15839636|ref|NP_334673.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13879755|gb|AAK44487.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=556 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 39/83 (47%), Gaps = 12/83 (14%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGN-RGLDALGFAGTIPKSAPGSATG 448 R R +++Q +E+L D PE G+ +G LGFAGT K++PG G Sbjct 474 RRRPKIKQLGRGYEYLDLD--------PETGHDPTGSPQGAGTLGFAGTTHKASPGQVAG 525 Query 449 LTHL-GGGFADVLSQPMLPHTWD 470 L L F PM+P TWD Sbjct 526 LITLPNDAFGGSPRTPMMPGTWD 548 >gi|307082389|ref|ZP_07491559.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308360037|gb|EFP48888.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=555 Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 123/252 (49%), Positives = 163/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 39/83 (47%), Gaps = 12/83 (14%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGN-RGLDALGFAGTIPKSAPGSATG 448 R R +++Q +E+L D PE G+ +G LGFAGT K++PG G Sbjct 473 RRRPKIKQLGRGYEYLDLD--------PETGHDPTGSPQGAGTLGFAGTTHKASPGQVAG 524 Query 449 LTHL-GGGFADVLSQPMLPHTWD 470 L L F PM+P TWD Sbjct 525 LITLPNDAFGGSPRTPMMPGTWD 547 >gi|333989625|ref|YP_004522239.1| PPE family protein [Mycobacterium sp. JDM601] gi|333485593|gb|AEF34985.1| PPE family protein [Mycobacterium sp. JDM601] Length=501 Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 146/204 (72%), Gaps = 3/204 (1%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS G GPGPLL AA AW ++A+Y E+A EL +VLA VQ+++W Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGPLLEAASAWSLMSAEYAEVAAELDAVLAGVQSAAW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA ++ AH P+ WLT +A + AAAA H+TAA YT AL GMPTLAELAANHA+H Sbjct 61 QGPSAQQYATAHVPYLSWLTDSAAKSAAAAALHQTAATAYTVALAGMPTLAELAANHAVH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 LV TNFFGVNTIPIALNEADY+RMWIQAA +M+ YQ VA ++A+ P PAP +V Sbjct 121 ATLVATNFFGVNTIPIALNEADYVRMWIQAAEMMTVYQGVAGSALASVPVATPAPAVVDP 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A + A S+ + I LL++ Sbjct 181 AGQAVADVSW---EQQIADLLREI 201 >gi|289748026|ref|ZP_06507404.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289688554|gb|EFD56042.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=491 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 144/204 (71%), Gaps = 1/204 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A +AAS P+ + LQ L+ Sbjct 181 NAPTAASDE-PNQVQEWLQWLQKI 203 >gi|118619893|ref|YP_908225.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118572003|gb|ABL06754.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=472 Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 190/498 (39%), Positives = 247/498 (50%), Gaps = 72/498 (14%) Query 7 FAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSAD 66 A+PPEV SA LS G GPG LLAAA W L+AQY+ EL +LA VQA+SWQG +A Sbjct 1 MAIPPEVHSALLSAGQGPGSLLAAAAQWQELSAQYSAAVVELTQLLAEVQATSWQGYAAH 60 Query 67 RFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVTT 126 +++ AH P+ WL AA ++ AA H AAAGY+SA+ MPTLAELAANHA+HG LV T Sbjct 61 QWLAAHGPYLIWLEQAAIDSSVTAAQHRIAAAGYSSAVAAMPTLAELAANHAIHGVLVVT 120 Query 127 NFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIV-----TSA 181 NFFG+N IPIALNEADY+RMW+QAA M+ YQAV+ + AA P TPPAP I+ + A Sbjct 121 NFFGINAIPIALNEADYVRMWVQAAETMTTYQAVSEVAAAAVPPTPPAPSILRPGGGSQA 180 Query 182 ASSAASSSFPDPTKLILQLLKD----FLELLRYLAVELLPGPLGDLIA-QVLD--WFISF 234 A+S S + IL L D FLE + + + +IA Q+ D W+ + Sbjct 181 AASGIGSWIGQLLRDILSFLADPYKYFLEFFQRMGFSPAVAVILAIIALQLYDFLWYPYY 240 Query 235 VSG-----PVFT--FLAYLVLDPLIYFGPFAPLTSPVLLPAGLTGLAGLGAVSGPAGPMV 287 S P FT A VL L Y P+T+PV PA + V+ AGP Sbjct 241 ASYGLLLLPFFTPALSALSVLSALAYLANRTPITAPVAAPAERS-------VADLAGPQ- 292 Query 288 ERVHSDGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTA----------PSTPG 337 +VG PAA P P+P ++ + PS+P Sbjct 293 -------------------PVVGLTPAASAFAP-PSPQATSPAPSAPSPAPTGSPPSSPA 332 Query 338 SSAAQGLYAVGGPDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRR- 396 S YAV GP G + T A T P + S A + R + R Sbjct 333 IS-----YAVLGPAPPGVSSGPGATTGAAATATDTT-RPAAPAALSSSRAGRRKRSKNRV 386 Query 397 -LRQHRFEFLAD----DGRLTMPNTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTH 451 +R +R EFL + D + P T E A + ++G LG GT S G+A G+ Sbjct 387 GVRGYRDEFLQEPATMDSPIDAPGTAEPAP-SPSSQGAGPLGLTGTA-ASHDGAAAGMVR 444 Query 452 LGGGFADVLSQPMLPHTW 469 L + P+LP TW Sbjct 445 L-SSHGTSTAVPLLPATW 461 >gi|323717087|gb|EGB26297.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=403 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 144/204 (71%), Gaps = 1/204 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A +AAS P+ + LQ L+ Sbjct 181 NAPTAASDE-PNQVQEWLQWLQKI 203 >gi|306787247|ref|ZP_07425569.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308336045|gb|EFP24896.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] Length=401 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 144/204 (71%), Gaps = 1/204 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A +AAS P+ + LQ L+ Sbjct 181 NAPTAASDE-PNQVQEWLQWLQKI 203 >gi|289760363|ref|ZP_06519741.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289715927|gb|EFD79939.1| PPE family protein [Mycobacterium tuberculosis T85] Length=416 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 144/204 (71%), Gaps = 1/204 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A +AAS P+ + LQ L+ Sbjct 181 NAPTAASDE-PNQVQEWLQWLQKI 203 >gi|339296965|gb|AEJ49075.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=241 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 124/251 (50%), Positives = 163/251 (65%), Gaps = 15/251 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPL 251 + DPL Sbjct 226 LQAMFSGFDPL 236 >gi|289756323|ref|ZP_06515701.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289696910|gb|EFD64339.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=331 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 144/204 (71%), Gaps = 1/204 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A +AAS P+ + LQ L+ Sbjct 181 NAPTAASDE-PNQVQEWLQWLQKI 203 >gi|289748027|ref|ZP_06507405.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289688555|gb|EFD56043.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=335 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/204 (58%), Positives = 144/204 (71%), Gaps = 1/204 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALNE+DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDF 204 A +AAS P+ + LQ L+ Sbjct 181 NAPTAASDE-PNQVQEWLQWLQKI 203 >gi|289445789|ref|ZP_06435533.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418747|gb|EFD15948.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=556 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 122/252 (49%), Positives = 162/252 (65%), Gaps = 15/252 (5%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLL +A WH+L+ Y E A ELA++LAAVQA +W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 GP+A +V AH P+ WL A+ + A A ETAA Y +AL MPTLAEL ANHA+H Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 G L+ TNFFG+NTIPIALN +DY RMWIQAAT M+ YQAV+ +VAA P T PAPQIV + Sbjct 121 GVLMATNFFGINTIPIALNGSDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVF 240 A +AAS +P + ++++L+ L+ + D V+ FI++++ F Sbjct 181 NAPTAASD---EPNQ-----VQEWLQWLQKIGYT-------DFYNNVIQPFINWLTNLPF 225 Query 241 TFLAYLVLDPLI 252 + DP + Sbjct 226 LQAMFSGFDPWL 237 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 39/83 (47%), Gaps = 12/83 (14%) Query 392 RLRRRLRQ--HRFEFLADDGRLTMPNTPEMADVAAGN-RGLDALGFAGTIPKSAPGSATG 448 R R +++Q +E+L D PE G+ +G LGFAGT K++PG G Sbjct 474 RRRPKIKQLGRGYEYLDLD--------PETGHDPTGSPQGAGTLGFAGTTHKASPGQVAG 525 Query 449 LTHL-GGGFADVLSQPMLPHTWD 470 L L F PM+P TWD Sbjct 526 LITLPNDAFGGSPRTPMMPGTWD 548 >gi|240172392|ref|ZP_04751051.1| PPE protein [Mycobacterium kansasii ATCC 12478] Length=513 Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/242 (50%), Positives = 153/242 (64%), Gaps = 19/242 (7%) Query 6 WFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSA 65 W A+PPEV SA LS+G GPG LAAA A+ L+A+Y ELA+VL AVQ SWQGP+A Sbjct 9 WMALPPEVHSAQLSSGPGPGAFLAAAGAYQVLSAEYGSAVGELAAVLNAVQGGSWQGPTA 68 Query 66 DRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVT 125 + +V AH P+ WL A + AA H+ AA YT+AL MPTLAELAANH +HG LV Sbjct 69 EEYVAAHAPYLVWLEQARGKSIAAGLQHQLAAQAYTAALASMPTLAELAANHVVHGVLVA 128 Query 126 TNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASSA 185 TNFFG+NTIPIALNEADY RMW+QAAT MS YQAV++ + + P+T PAP ++ + S A Sbjct 129 TNFFGINTIPIALNEADYFRMWVQAATTMSIYQAVSNVAADSVPATSPAPPLLKADTSDA 188 Query 186 ASSSFPDPTKLI-LQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVS---GPVFT 241 A DP +L L D L L DL++Q+L +I++V P+ Sbjct 189 A-----DPAQLTALASATDAGNQLN----------LADLVSQLLQAYINYVEQLYAPIID 233 Query 242 FL 243 FL Sbjct 234 FL 235 >gi|183980812|ref|YP_001849103.1| PPE family protein [Mycobacterium marinum M] gi|183174138|gb|ACC39248.1| PPE family protein [Mycobacterium marinum M] Length=412 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 107/191 (57%), Positives = 129/191 (68%), Gaps = 0/191 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T +W A PPEV SA LS G GPGPL AA AW AL A++T A EL ++L VQA++W Sbjct 1 MTASVWMASPPEVHSALLSAGPGPGPLHEAATAWTALCAEHTSAAEELTTLLGGVQAAAW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QG SA +V AH P+ WLT + A AA HE AA YTSAL MPTLAEL ANH H Sbjct 61 QGTSAQSYVDAHAPYLAWLTTTSADYAATAAEHEVAAGAYTSALAAMPTLAELTANHTTH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 ALV TNFFG+NTIPI LNEADY RMW+QAAT MS YQ V+ ++A+ P T PAP I+ + Sbjct 121 TALVATNFFGLNTIPITLNEADYARMWVQAATTMSAYQVVSGTTLASMPHTTPAPPILNT 180 Query 181 AASSAASSSFP 191 +A + + P Sbjct 181 QIGTATNVAAP 191 >gi|333988934|ref|YP_004521548.1| PPE family protein [Mycobacterium sp. JDM601] gi|333484902|gb|AEF34294.1| PPE family protein [Mycobacterium sp. JDM601] Length=465 Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 181/479 (38%), Positives = 240/479 (51%), Gaps = 50/479 (10%) Query 18 LSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSADRFVVAHQPFRY 77 LS+G GPGPLL+AA AW+AL+ +Y +A EL ++L AVQ+ +WQGPSA++++ AH P+ Sbjct 2 LSSGPGPGPLLSAAGAWNALSVEYASVADELTALLGAVQSGAWQGPSAEQYLAAHVPYLA 61 Query 78 WLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVTTNFFGVNTIPIA 137 WL A+ + AA HE AA+ Y SAL MPTLAELAANH HG LV TNFFG+NTIPIA Sbjct 62 WLGKASADSAGVAAQHEVAASAYASALATMPTLAELAANHMTHGVLVATNFFGINTIPIA 121 Query 138 LNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASSAASSSFPDPTKLI 197 LNEADY RMW+QAAT MS Y AV+ ++A+ P T AP ++ + + A+ + D Sbjct 122 LNEADYARMWVQAATTMSTYHAVSGAALASAPRTVQAPPMLKADTAQPAADTSSD----- 176 Query 198 LQLLKDFLELLRYLAVELLPGPLGDLIAQVLD-------WFISFVSGPVFTFLAYLVLDP 250 + DF L V+ P+G +I ++L WF P+ F+AY Sbjct 177 ---IGDFFTRLWDQLVQFFTDPIG-VIREILSSPGALVTWF------PLLFFIAYEA--- 223 Query 251 LIYFGPF----------APLTSPVLLPAGLTGLAG-LGAVSGPAGPMVERVHSDGPSRQS 299 +F PF + P+LL GL LA LG P G + + PS Sbjct 224 --FFIPFGWTFWSLLFASAALVPILLGVGLGHLADMLGGELAPDGDLKPVPVAVAPSGDR 281 Query 300 WPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTPGSSAAQ----GLYAVGGPDGEGF 355 AT V + G +P+ V TP A T+A T + P +A G GG G G Sbjct 282 ---ATPV-VAGFSPS--VATPGAASVTAAPATPAAAPAPAAGGAIGFGYLVAGGDPGTGL 335 Query 356 NPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGRLTMPN 415 P A AA G A+ + R R L H E++ D P Sbjct 336 GPTLTERNKAQAPASRVPAAAAAVGASARERSRARRRRRAVLHDHADEYMDMDSGPAGP- 394 Query 416 TPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQ-PMLPHTWDGSD 473 E A A +RG ALGF GT+ +A+GLT L G PMLP TW ++ Sbjct 395 VDEPASAAGSDRGAGALGFTGTVGGRGTAAASGLTTLAGDGFGGGPGVPMLPETWSENE 453 >gi|296167571|ref|ZP_06849908.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897137|gb|EFG76747.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=354 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 126/211 (60%), Positives = 150/211 (72%), Gaps = 7/211 (3%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GP LLAAA AW L+A+Y A +L+ VLAA QA SW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPASLLAAAGAWSELSAEYASAAAQLSGVLAAAQAGSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA+ +V AH P+ WLT A+ + AAAA HETAA YT+AL MPTL ELAANHA+H Sbjct 61 QGPSAESYVAAHAPYLAWLTRASADSAAAAAQHETAAVAYTAALATMPTLPELAANHAVH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALV TNFFGVNT+PIALNEADY RMW+QAA M+ YQAV+ +VA+TP PAPQIV S Sbjct 121 GALVATNFFGVNTVPIALNEADYARMWVQAAGTMTTYQAVSTAAVASTPQPEPAPQIVKS 180 Query 181 AASSAAS-SSFPDPT------KLILQLLKDF 204 AA+S S DPT + I +LK+ Sbjct 181 AAASHDSGGDVHDPTINNPLDQFIANILKNL 211 >gi|118468729|ref|YP_885030.1| PPE family protein [Mycobacterium smegmatis str. MC2 155] gi|118170016|gb|ABK70912.1| ppe family protein [Mycobacterium smegmatis str. MC2 155] Length=523 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 197/528 (38%), Positives = 273/528 (52%), Gaps = 75/528 (14%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A+PPEV S+ LS+G GPG LLAAA AW +L+A+Y A EL SVL+AVQA SW Sbjct 1 MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAEYAAAAAELTSVLSAVQAGSW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 +GPS++++V AH P+ WL + + AAA HETAAA Y++AL MPT+AELA NH MH Sbjct 61 EGPSSEQYVAAHAPYLQWLAQQSANSAAAAVQHETAAAAYSTALATMPTMAELALNHTMH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQA-----------------VAHE 163 G LV TNFFG+NTIPIALNEADY+RMWIQAAT MS YQA + Sbjct 121 GVLVATNFFGINTIPIALNEADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKP 180 Query 164 SVAATPSTPPAPQIVTSAASSAASSSFPDPTKLILQLLKDFLELL--RYLAVELLPGPLG 221 V S + Q +++ A++A S S D + +I LL +L+ + ++ L PLG Sbjct 181 GVGEAGSASASVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGGQAILDFLKDPLG 240 Query 222 DLIAQVLDWFISFVSGPVFTF------LAYLVLDPLIYFGPFAPL-TSPVLLPA----GL 270 +L ++L F++ +G + T+ +AY V L+ + + + SP L+PA G+ Sbjct 241 NL-GRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASPFLIPALAALGI 299 Query 271 TGLAGLGAVSGPAGPMVERVHS---DGPSRQSWPAATGVTLVGTNPAALVTTPAPAPTTS 327 TGL L ++ V + D P+ P P A+ +PA P ++ Sbjct 300 TGLVLL----------IDHVLNNPVDVPAEDEAPQEVAAAPRTDQPLAVGISPAGVPGSA 349 Query 328 AAPTAPSTPGSSAAQGL----------YAVGGPD-GEGFNPIAKTTALAGVTTDAAAPAA 376 A AP+ + YAV D GEGF P G + AAPA+ Sbjct 350 ATAAAPAPAPAGTTVAAPAPAAATFVPYAVANRDPGEGFTPT------LGNKSQVAAPAS 403 Query 377 KLPGDQAQSSASKAT----------RLRRRLRQHRFEFLADDGRLTMPNTPEMADVAAGN 426 +P + +AS A+ ++ R + + P PE V A Sbjct 404 GVPAAASGVAASLASRRKRRRKKGAQIEERGYADAYMDYEEPDEDPAPQ-PE-PRVRASE 461 Query 427 RGLDALGFAGTIPKSAPGSATGLTHL-GGGFADVLSQPMLPHTWDGSD 473 RG DA+GF GT+ + +A GLT L G F D PMLP TWDG + Sbjct 462 RGSDAMGFTGTVTRHDV-TAAGLTTLTGDTFDDRPVTPMLPGTWDGDE 508 >gi|169631856|ref|YP_001705505.1| PPE family protein [Mycobacterium abscessus ATCC 19977] gi|169243823|emb|CAM64851.1| PPE family protein [Mycobacterium abscessus] Length=496 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 127/271 (47%), Positives = 168/271 (62%), Gaps = 21/271 (7%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPG L AAA AW +L+ +Y+ A EL + L +V+A W Sbjct 1 MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTEYSSAANELTTTLGSVRAGVW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 G SA+++ AH P+ WL + V+ AA ETAA Y+ AL MPTL ELAANHA H Sbjct 61 DGASAEQYQTAHVPYLSWLHETSAVSAGVAAQTETAATAYSEALATMPTLGELAANHATH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 GALV TNFFG+NTIPIA+NEADY+RMWIQAATVMS YQAV+ SV+A P T PAP +++ Sbjct 121 GALVATNFFGINTIPIAVNEADYIRMWIQAATVMSTYQAVSESSVSAAPPTSPAPPVLSP 180 Query 181 AASSAASSS----------FPDPTKLILQLLKD---FLELLRYLAVELLPGPLGDLIAQV 227 + +AA ++ PDP I LLK+ FL + R L L+ P+G ++ + Sbjct 181 DSGAAARTAAQDATKPPPIVPDPNDPIEMLLKNSQHFLGMYRALK-GLITDPVGTIVRII 239 Query 228 LDWFISFVSGPVFTFLAYLVLDPLIYFGPFA 258 +D F + P + + PL Y +A Sbjct 240 ID----FSTNPAAAIVTWT---PLFYVFAYA 263 >gi|41409823|ref|NP_962659.1| hypothetical protein MAP3725 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398655|gb|AAS06275.1| hypothetical protein MAP_3725 [Mycobacterium avium subsp. paratuberculosis K-10] Length=518 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 139/291 (48%), Positives = 179/291 (62%), Gaps = 40/291 (13%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS+G GPGPLLA+A AW++LAA+YT A EL +V+ VQA +W Sbjct 1 MTAPIWMAFPPEVHSALLSSGPGPGPLLASAGAWNSLAAEYTSAAEELTAVVEGVQAGAW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA+ +V AH P+ WLT A+ + AAA HE AAA YT+AL MPTL ELAANHA H Sbjct 61 QGPSAESYVAAHAPYLAWLTQASADSAGAAARHEAAAAAYTAALAAMPTLGELAANHATH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 AL TNFFG+NTIPIA+NEADY RMW+QAAT M+ YQAV+ +VAATP T PAPQI S Sbjct 121 AALQATNFFGINTIPIAVNEADYARMWVQAATTMTTYQAVSTAAVAATPQTMPAPQIAKS 180 Query 181 -AASSAASSSFPDPTKLILQLLKDFLELLRYLAVELLPGPL----------------GDL 223 AA+ +P+PT Q+ D + Y ++E GP+ +L Sbjct 181 TAATIPFQRPYPNPTNFS-QVWADLWYDIPY-SIETFQGPVDPANWTQLFQFWNVTFANL 238 Query 224 ------IAQV------------LDWFISFVSGPVFTFLA---YLVLDPLIY 253 +AQ+ L W + F++G +F L +L+ PL+Y Sbjct 239 AGTPAKLAQIFSNPSVLFSWPTLLWVLDFIAGRIFDILVTLKFLLEQPLLY 289 >gi|31791274|ref|NP_853767.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121636009|ref|YP_976232.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988482|ref|YP_002643169.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31616859|emb|CAD92961.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121491656|emb|CAL70114.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771595|dbj|BAH24401.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600025|emb|CCC62693.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=463 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 189/482 (40%), Positives = 250/482 (52%), Gaps = 44/482 (9%) Query 7 FAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSAD 66 A+PPEV S LS G GPG LL AA+ W L+ QY EL +L VQASSWQG +A Sbjct 1 MAIPPEVHSGLLSAGCGPGSLLVAAQQWQELSDQYALACAELGQLLGEVQASSWQGTAAT 60 Query 67 RFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVTT 126 ++V AH P+ WL A + AA H AAA Y SAL MPT AELAANHA+HG L+ T Sbjct 61 QYVAAHGPYLAWLEQTAINSAVTAAQHVAAAAAYCSALAAMPTPAELAANHAIHGVLIAT 120 Query 127 NFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASSAA 186 NFFG+NT+PIALNEADY+RMW+QAA M+ YQAVA + A PST PAP I A A Sbjct 121 NFFGINTVPIALNEADYVRMWLQAADTMAAYQAVADAATVAVPSTQPAPPI--RAPGGDA 178 Query 187 SSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVFTFLAYL 246 + ++ D I QL++D L+ + + L++F F P T + L Sbjct 179 ADTWLDVLSSIGQLIRDILDF------------IANPYKYFLEFFEQFGFSPAVTVVLAL 226 Query 247 VLDPLI------YFGPFAPLTSPVLLP--AGLTGLAGLGAVSG--PAGPMVERVHSDGPS 296 V L Y+ + L P P + LT L+ L + PAG ++ + GP Sbjct 227 VALQLYDFLWYPYYASYGLLLLPFFTPTLSALTALSALIHLLNLPPAG-LLPIAAALGPG 285 Query 297 RQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTP---GSSAAQGL-YAVGG--P 350 Q W A V + A +P PT++ AP APS+ +SAA G+ YAV G P Sbjct 286 DQ-WGANLAVAVTPATAAVPGGSP---PTSNPAPAAPSSNSVGSASAAPGISYAVPGLAP 341 Query 351 DGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGR 410 G P A T + A A PG A++ K + +R +R EFL D Sbjct 342 PGVSSGPKAGTKSPDTAADTLATAGAARPG-LARAHRRKRSESGVGIRGYRDEFL--DAT 398 Query 411 LTMP---NTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPH 467 T+ + P A+ AAG++G LGFAGT P ++ G+A G+ L + + P+LP Sbjct 399 ATVDAATDVPAPAN-AAGSQGAGTLGFAGTAPTTS-GAAAGMVQL-SSHSTSTTVPLLPT 455 Query 468 TW 469 TW Sbjct 456 TW 457 >gi|296165161|ref|ZP_06847709.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899469|gb|EFG78927.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=307 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/208 (53%), Positives = 143/208 (69%), Gaps = 0/208 (0%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV S LS+G GPGPLLAAA W +++ QY E A EL +L AVQ +W Sbjct 1 MTAPIWIAFPPEVHSTLLSSGPGPGPLLAAAATWSSMSGQYAEAADELGGLLGAVQGGAW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 +GP+A+++V AH P+ WL ++ + AAA HETAA YT+AL MPT+ ELAANHA+H Sbjct 61 EGPTAEQYVAAHAPYLAWLLESSAKSATAAALHETAAGAYTAALAAMPTMPELAANHAVH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 ALV TNFFGVNTIPIA+NEADY RMW+QAAT M+ YQ A ++AA P+T PAP IVT Sbjct 121 AALVATNFFGVNTIPIAVNEADYARMWVQAATTMTSYQVTAESALAAVPATTPAPAIVTP 180 Query 181 AASSAASSSFPDPTKLILQLLKDFLELL 208 A ++ ++ D + Q + + L Sbjct 181 GAEASVATLHADTQQQAAQTYPSWQDQL 208 >gi|340625132|ref|YP_004743584.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003322|emb|CCC42440.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=463 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 186/483 (39%), Positives = 247/483 (52%), Gaps = 46/483 (9%) Query 7 FAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSAD 66 A+PPEV S LS G GPG LL AA+ W L+ QY EL+ ++ VQASSWQG A Sbjct 1 MAIPPEVHSGLLSAGCGPGSLLVAAQQWQELSDQYARACAELSQLMVEVQASSWQGTGAT 60 Query 67 RFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVTT 126 ++V AH P+ WL A + AA H AAA Y SAL MPT AELAANHA+HG L+ T Sbjct 61 QYVAAHGPYLAWLEQTAINSAVTAAQHVAAAAAYCSALAAMPTPAELAANHAIHGVLIAT 120 Query 127 NFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASSAA 186 NFFG+NT+PIALNEADY+RMW+QAA M+ YQAVA + A PST PAP I A A Sbjct 121 NFFGINTVPIALNEADYVRMWLQAADTMAAYQAVADAATVAVPSTQPAPPI--RAPGRDA 178 Query 187 SSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVFTFLAYL 246 + + + I QL++D L+ + + L++F F P T + L Sbjct 179 ADTRLNVLSSIGQLIRDILDF------------IANPYKYFLEFFEQFGFSPAITVVLAL 226 Query 247 VLDPLI------YFGPFAPLTSPVLLP--AGLTGLAGLGAVSG--PAGPMVERVHSDGPS 296 V L Y+ + L P P + LT L+ L + PAG ++ + GP Sbjct 227 VALQLYDFLWYPYYASYGLLLLPFFTPTLSALTALSALIHLLNLPPAG-LLPIAAALGPG 285 Query 297 RQSWPAATGVTLVGTNPAALVTTPAPAPTTS----AAPTAPSTPGSSAAQGL-YAVGG-- 349 Q W G L +A P +P TS AAP++ S +SA G+ YAV G Sbjct 286 DQ-W----GANLAVAVTSATAAVPGGSPPTSNPAPAAPSSNSVGSASAPPGISYAVPGLA 340 Query 350 PDGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDG 409 P G P A T + A A PG A++ K + +R +R EFL D Sbjct 341 PPGVSSGPKAGTKSPDSAADTLATAGAARPG-LARAHRRKRSESGVGIRGYRDEFL--DA 397 Query 410 RLTMP---NTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLP 466 T+ + P A+ AAG++G LGFAGT P ++ G+A G+ L + + P+LP Sbjct 398 TATVDAATDVPAPAN-AAGSQGAGTLGFAGTAPTTS-GAAAGMVQL-SSHSTSTTVPLLP 454 Query 467 HTW 469 TW Sbjct 455 TTW 457 >gi|289441465|ref|ZP_06431209.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289567988|ref|ZP_06448215.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289748566|ref|ZP_06507944.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289414384|gb|EFD11624.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289541741|gb|EFD45390.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289689153|gb|EFD56582.1| PPE family protein [Mycobacterium tuberculosis T92] Length=463 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 189/482 (40%), Positives = 249/482 (52%), Gaps = 44/482 (9%) Query 7 FAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSAD 66 A+PPEV S LS G GPG LL AA+ W L+ QY EL +L VQASSWQG +A Sbjct 1 MAIPPEVHSGLLSAGCGPGSLLVAAQQWQELSDQYALACAELGQLLGEVQASSWQGTAAT 60 Query 67 RFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVTT 126 ++V AH P+ WL A + AA H AAA Y SAL MPT AELAANHA+HG L+ T Sbjct 61 QYVAAHGPYLAWLEQTAINSAVTAAQHVAAAAAYCSALAAMPTPAELAANHAIHGVLIAT 120 Query 127 NFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASSAA 186 NFFG+NT+PIALNEADY+RMW+QAA M+ YQAVA + A PST PAP I A A Sbjct 121 NFFGINTVPIALNEADYVRMWLQAADTMAAYQAVADAATVAVPSTQPAPPI--RAPGGDA 178 Query 187 SSSFPDPTKLILQLLKDFLELLRYLAVELLPGPLGDLIAQVLDWFISFVSGPVFTFLAYL 246 + + D I QL++D L+ + + L++F F P T + L Sbjct 179 ADTRLDVLSSIGQLIRDILDF------------IANPYKYFLEFFEQFGFSPAVTVVLAL 226 Query 247 VLDPLI------YFGPFAPLTSPVLLP--AGLTGLAGLGAVSG--PAGPMVERVHSDGPS 296 V L Y+ + L P P + LT L+ L + PAG ++ + GP Sbjct 227 VALQLYDFLWYPYYASYGLLLLPFFTPTLSALTALSALIHLPNLPPAG-LLPIAAALGPG 285 Query 297 RQSWPAATGVTLVGTNPAALVTTPAPAPTTSAAPTAPSTP---GSSAAQGL-YAVGG--P 350 Q W A V + A +P PT++ AP APS+ +SAA G+ YAV G P Sbjct 286 DQ-WGANLAVAVTPATAAVPGGSP---PTSNPAPAAPSSNSVGSASAAPGISYAVPGLAP 341 Query 351 DGEGFNPIAKTTALAGVTTDAAAPAAKLPGDQAQSSASKATRLRRRLRQHRFEFLADDGR 410 G P A T + A A PG A++ K + +R +R EFL D Sbjct 342 PGVSSGPKAGTKSPDTAADTLATAGAARPG-LARAHRRKRSESGVGIRGYRDEFL--DAT 398 Query 411 LTMP---NTPEMADVAAGNRGLDALGFAGTIPKSAPGSATGLTHLGGGFADVLSQPMLPH 467 T+ + P A+ AAG++G LGFAGT P ++ G+A G+ L + + P+LP Sbjct 399 ATVDAATDVPAPAN-AAGSQGAGTLGFAGTAPTTS-GAAAGMVQL-SSHSTSTTVPLLPT 455 Query 468 TW 469 TW Sbjct 456 TW 457 >gi|183980293|ref|YP_001848584.1| PPE family protein, PPE1 [Mycobacterium marinum M] gi|183173619|gb|ACC38729.1| PPE family protein, PPE1 [Mycobacterium marinum M] Length=472 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 115/202 (57%), Positives = 139/202 (69%), Gaps = 2/202 (0%) Query 7 FAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSWQGPSAD 66 A+PPEV SA LS G GPG LLAAA W L+AQY+ EL +LA VQA+SWQG +A Sbjct 1 MAIPPEVHSALLSAGQGPGSLLAAAAQWQELSAQYSAAVVELTQLLAEVQATSWQGYAAH 60 Query 67 RFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMHGALVTT 126 +++ AH P+ WL AA ++ AA H AAAGY+SA+ MPTLAELAANHA+HG LV T Sbjct 61 QWLAAHGPYLIWLEQAAIDSSVTAAQHRIAAAGYSSAVAAMPTLAELAANHAIHGVLVVT 120 Query 127 NFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTSAASSAA 186 NFFG+N IPIALNEADY+RMWIQAA M+ YQAV+ + AA P TPPAP I+ S A Sbjct 121 NFFGINAIPIALNEADYVRMWIQAAETMTTYQAVSEVAAAAVPPTPPAPSILRPGGESQA 180 Query 187 SSSFPDPTKLILQLLKDFLELL 208 ++S I QLL+D L L Sbjct 181 AAS--GIGSWIGQLLRDILSFL 200 >gi|289746824|ref|ZP_06506202.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687352|gb|EFD54840.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=434 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 129/253 (51%), Positives = 160/253 (64%), Gaps = 11/253 (4%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS G GPG L AAA W AL+A+Y +A EL+ V+AAV A W Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA+ FV A+ P+ WL A+ + AAA HE AAAGY AL MPTL ELAANH H Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 LV TNFFG+NTIPIALNEADY+RMW+QAATVMS Y+AV ++ ATP T PAP IV Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 AASS-----AASSSFPDPTKLILQLLKD-FLELLRYLAVELLPGPLGDLIAQVLDWFISF 234 A+ AA++ P P I+Q L++ F +YL+ L +L A WF F Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLS-----ALLSELPAVAWVWFQLF 235 Query 235 VSGPVFTFLAYLV 247 V F + +++ Sbjct 236 VDILGFNIIGFII 248 >gi|339295852|gb|AEJ47963.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=434 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 129/253 (51%), Positives = 161/253 (64%), Gaps = 11/253 (4%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS G GPG L AAA W AL+A+Y +A EL++V+AAV A W Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA+ FV A+ P+ WL A+ + AAA HE AAAGY AL MPTL ELAANH H Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 LV TNFFG+NTIPIALNEADY+RMW+QAATVMS Y+AV ++ ATP T PAP IV Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 AASS-----AASSSFPDPTKLILQLLKD-FLELLRYLAVELLPGPLGDLIAQVLDWFISF 234 A+ AA++ P P I+Q L++ F +YL+ L +L A WF F Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLS-----ALLSELPAVAWVWFQLF 235 Query 235 VSGPVFTFLAYLV 247 V F + +++ Sbjct 236 VDILGFNIIGFII 248 >gi|57117045|ref|YP_177918.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662869|ref|YP_001284392.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148824208|ref|YP_001288962.1| PPE family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=434 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 129/253 (51%), Positives = 160/253 (64%), Gaps = 11/253 (4%) Query 1 VTFPMWFAVPPEVPSAWLSTGMGPGPLLAAARAWHALAAQYTEIATELASVLAAVQASSW 60 +T P+W A PPEV SA LS G GPG L AAA W AL+A+Y +A EL+ V+AAV A W Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSADRFVVAHQPFRYWLTHAATVATAAAAAHETAAAGYTSALGGMPTLAELAANHAMH 120 QGPSA+ FV A+ P+ WL A+ + AAA HE AAAGY AL MPTL ELAANH H Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 GALVTTNFFGVNTIPIALNEADYLRMWIQAATVMSHYQAVAHESVAATPSTPPAPQIVTS 180 LV TNFFG+NTIPIALNEADY+RMW+QAATVMS Y+AV ++ ATP T PAP IV Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 AASS-----AASSSFPDPTKLILQLLKD-FLELLRYLAVELLPGPLGDLIAQVLDWFISF 234 A+ AA++ P P I+Q L++ F +YL+ L +L A WF F Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLS-----ALLSELPAVAWVWFQLF 235 Query 235 VSGPVFTFLAYLV 247 V F + +++ Sbjct 236 VDILGFNIIGFII 248 Lambda K H 0.317 0.130 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1003872181620 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40