BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2137c Length=137 Score E Sequences producing significant alignments: (Bits) Value gi|15609274|ref|NP_216653.1| hypothetical protein Rv2137c [Mycob... 276 8e-73 gi|167967862|ref|ZP_02550139.1| hypothetical protein MtubH3_0744... 203 7e-51 gi|118617870|ref|YP_906202.1| hypothetical protein MUL_2367 [Myc... 184 5e-45 gi|118466134|ref|YP_881559.1| hypothetical protein MAV_2356 [Myc... 173 6e-42 gi|240171415|ref|ZP_04750074.1| hypothetical protein MkanA1_1903... 173 8e-42 gi|254823392|ref|ZP_05228393.1| hypothetical protein MintA_25916... 172 2e-41 gi|296165221|ref|ZP_06847768.1| conserved hypothetical protein [... 170 7e-41 gi|342859850|ref|ZP_08716503.1| hypothetical protein MCOL_13263 ... 163 7e-39 gi|183983116|ref|YP_001851407.1| hypothetical protein MMAR_3117 ... 159 1e-37 gi|467007|gb|AAA17192.1| B2126_C2_188 [Mycobacterium leprae] 155 1e-36 gi|15827667|ref|NP_301930.1| hypothetical protein ML1296 [Mycoba... 153 9e-36 gi|118470046|ref|YP_888474.1| hypothetical protein MSMEG_4195 [M... 142 1e-32 gi|120404456|ref|YP_954285.1| hypothetical protein Mvan_3484 [My... 134 3e-30 gi|108800125|ref|YP_640322.1| hypothetical protein Mmcs_3159 [My... 131 3e-29 gi|315443957|ref|YP_004076836.1| hypothetical protein Mspyr1_235... 131 4e-29 gi|145223629|ref|YP_001134307.1| hypothetical protein Mflv_3042 ... 130 5e-29 gi|169629193|ref|YP_001702842.1| hypothetical protein MAB_2107 [... 91.3 4e-17 gi|333919621|ref|YP_004493202.1| hypothetical protein AS9A_1953 ... 81.3 5e-14 gi|54024888|ref|YP_119130.1| hypothetical protein nfa29190 [Noca... 80.5 8e-14 gi|226360037|ref|YP_002777815.1| hypothetical protein ROP_06230 ... 77.4 6e-13 gi|111017906|ref|YP_700878.1| hypothetical protein RHA1_ro00887 ... 74.3 5e-12 gi|226306695|ref|YP_002766655.1| hypothetical protein RER_32080 ... 73.9 6e-12 gi|254775028|ref|ZP_05216544.1| hypothetical protein MaviaA2_101... 55.5 2e-06 gi|229494845|ref|ZP_04388598.1| hypothetical protein RHOER0001_6... 48.5 4e-04 gi|340353666|ref|ZP_08676477.1| gfo/Idh/MocA family oxidoreducta... 34.3 7.0 gi|340351172|ref|ZP_08674140.1| gfo/Idh/MocA family oxidoreducta... 33.9 8.7 >gi|15609274|ref|NP_216653.1| hypothetical protein Rv2137c [Mycobacterium tuberculosis H37Rv] gi|15841628|ref|NP_336665.1| hypothetical protein MT2195 [Mycobacterium tuberculosis CDC1551] gi|31793317|ref|NP_855810.1| hypothetical protein Mb2161c [Mycobacterium bovis AF2122/97] 41 more sequence titles Length=137 Score = 276 bits (706), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%) Query 1 MRNMKSTSHESESGKLLSISSCRPREMVLQRYSLGMTVTADRHLADKREEFAVEDISTGI 60 MRNMKSTSHESESGKLLSISSCRPREMVLQRYSLGMTVTADRHLADKREEFAVEDISTGI Sbjct 1 MRNMKSTSHESESGKLLSISSCRPREMVLQRYSLGMTVTADRHLADKREEFAVEDISTGI 60 Query 61 FASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGLVDIDLTDERS 120 FASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGLVDIDLTDERS Sbjct 61 FASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGLVDIDLTDERS 120 Query 121 LAAAVRDSVASAAPVSR 137 LAAAVRDSVASAAPVSR Sbjct 121 LAAAVRDSVASAAPVSR 137 >gi|167967862|ref|ZP_02550139.1| hypothetical protein MtubH3_07441 [Mycobacterium tuberculosis H37Ra] gi|254232295|ref|ZP_04925622.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254551172|ref|ZP_05141619.1| hypothetical protein Mtube_12021 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 34 more sequence titles Length=102 Score = 203 bits (516), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP Sbjct 1 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 60 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR Sbjct 61 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 102 >gi|118617870|ref|YP_906202.1| hypothetical protein MUL_2367 [Mycobacterium ulcerans Agy99] gi|118569980|gb|ABL04731.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=126 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 93/118 (79%), Positives = 99/118 (84%), Gaps = 2/118 (1%) Query 19 ISSCRPREMVLQRYSLGMTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHI 78 ISSC PR++ L RY LGMTV ADRH ADK FA+ED+ TGIFASGYGQVGDG SFSF I Sbjct 5 ISSCCPRKVFLTRYCLGMTVAADRHTADK--GFAIEDMLTGIFASGYGQVGDGHSFSFRI 62 Query 79 EHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVS 136 EHRSLVVEIYRPR+ GPVPQAEDVVA +VRGLVDIDLTDERSL AAVRDSV A P S Sbjct 63 EHRSLVVEIYRPRLTGPVPQAEDVVARSVRGLVDIDLTDERSLGAAVRDSVTHALPAS 120 >gi|118466134|ref|YP_881559.1| hypothetical protein MAV_2356 [Mycobacterium avium 104] gi|118167421|gb|ABK68318.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336461978|gb|EGO40828.1| hypothetical protein MAPs_25310 [Mycobacterium avium subsp. paratuberculosis S397] Length=100 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/102 (87%), Positives = 93/102 (92%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 M VTADRH+A K EFAVED+STGIFASGYGQVGDGRSFSFHIE+RSLVVE+YRPR+AGP Sbjct 1 MAVTADRHMAQK--EFAVEDMSTGIFASGYGQVGDGRSFSFHIENRSLVVEVYRPRLAGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQAEDVVA AVR LVDIDLTDERSL AAVRDSVA A PVSR Sbjct 59 VPQAEDVVATAVRSLVDIDLTDERSLTAAVRDSVAHAEPVSR 100 >gi|240171415|ref|ZP_04750074.1| hypothetical protein MkanA1_19031 [Mycobacterium kansasii ATCC 12478] Length=100 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 86/102 (85%), Positives = 94/102 (93%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MTVTADRH+A+K +FA+ED+STGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPR+ P Sbjct 1 MTVTADRHVANK--QFAIEDMSTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRLTAP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQAEDVVA +VR LVDID+TDERSLAAAVRDSVA A PVSR Sbjct 59 VPQAEDVVARSVRSLVDIDVTDERSLAAAVRDSVAQAVPVSR 100 >gi|254823392|ref|ZP_05228393.1| hypothetical protein MintA_25916 [Mycobacterium intracellulare ATCC 13950] Length=100 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 86/102 (85%), Positives = 95/102 (94%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 M VTADRH+ +EEFAVED+STGIFASGYGQVGDGRSFSFHIE+RSLVVE+YRPR+AGP Sbjct 1 MAVTADRHM--TQEEFAVEDMSTGIFASGYGQVGDGRSFSFHIENRSLVVEVYRPRLAGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQA++VVA AVRGLVDIDLTDERSL+AAVRDSVA A PVSR Sbjct 59 VPQADEVVATAVRGLVDIDLTDERSLSAAVRDSVAHAEPVSR 100 >gi|296165221|ref|ZP_06847768.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899410|gb|EFG78869.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=100 Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 87/101 (87%), Positives = 91/101 (91%), Gaps = 2/101 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 M V ADRH+A+K EFAVED STGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPR+AGP Sbjct 1 MAVIADRHIAEK--EFAVEDFSTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRLAGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVS 136 VPQAE+VVA AVR LVDIDLTDERSL AAVRDSVA A PVS Sbjct 59 VPQAEEVVATAVRSLVDIDLTDERSLIAAVRDSVAHAVPVS 99 >gi|342859850|ref|ZP_08716503.1| hypothetical protein MCOL_13263 [Mycobacterium colombiense CECT 3035] gi|342132982|gb|EGT86202.1| hypothetical protein MCOL_13263 [Mycobacterium colombiense CECT 3035] Length=103 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 84/101 (84%), Positives = 92/101 (92%), Gaps = 2/101 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 M VTADRHLA + EFAVED+STGI ASGYGQVGDGRSFSFHIE+RSLVVE+YRPR+AGP Sbjct 1 MAVTADRHLA--QNEFAVEDMSTGISASGYGQVGDGRSFSFHIENRSLVVEVYRPRLAGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVS 136 VPQA++VVA AVR LVDIDLTDERSL+AAVRDSVA A PVS Sbjct 59 VPQADEVVARAVRSLVDIDLTDERSLSAAVRDSVAHAEPVS 99 >gi|183983116|ref|YP_001851407.1| hypothetical protein MMAR_3117 [Mycobacterium marinum M] gi|183176442|gb|ACC41552.1| conserved hypothetical protein [Mycobacterium marinum M] Length=100 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MTV ADR ADK FA+ED+ TGIFASGYGQVGDG SFSFHIEHRSLVVEIYRPR+ GP Sbjct 1 MTVAADRQTADK--GFAIEDMLTGIFASGYGQVGDGHSFSFHIEHRSLVVEIYRPRLNGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VP AEDVVA +VRGLVDIDLTDERSLAAAVRDSV A P S Sbjct 59 VPHAEDVVARSVRGLVDIDLTDERSLAAAVRDSVTHALPASH 100 >gi|467007|gb|AAA17192.1| B2126_C2_188 [Mycobacterium leprae] Length=150 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/106 (76%), Positives = 86/106 (82%), Gaps = 2/106 (1%) Query 31 RYSLGMTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRP 90 RY MTVT DRH+A EF VE+ISTGIFASGYGQVGDGRSFSFHIEH SLVVEIYR Sbjct 46 RYLDSMTVTVDRHVAGN--EFTVEEISTGIFASGYGQVGDGRSFSFHIEHWSLVVEIYRT 103 Query 91 RVAGPVPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVS 136 R+AG VPQ E+VV A+RGLV+IDLTDERSLAAAVRD VA VS Sbjct 104 RLAGLVPQTEEVVPRAIRGLVNIDLTDERSLAAAVRDLVARTLTVS 149 >gi|15827667|ref|NP_301930.1| hypothetical protein ML1296 [Mycobacterium leprae TN] gi|221230144|ref|YP_002503560.1| hypothetical protein MLBr_01296 [Mycobacterium leprae Br4923] gi|13093218|emb|CAC31677.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933251|emb|CAR71391.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=111 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 80/106 (76%), Positives = 86/106 (82%), Gaps = 2/106 (1%) Query 31 RYSLGMTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRP 90 RY MTVT DRH+A EF VE+ISTGIFASGYGQVGDGRSFSFHIEH SLVVEIYR Sbjct 7 RYLDSMTVTVDRHVAGN--EFTVEEISTGIFASGYGQVGDGRSFSFHIEHWSLVVEIYRT 64 Query 91 RVAGPVPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVS 136 R+AG VPQ E+VV A+RGLV+IDLTDERSLAAAVRD VA VS Sbjct 65 RLAGLVPQTEEVVPRAIRGLVNIDLTDERSLAAAVRDLVARTLTVS 110 >gi|118470046|ref|YP_888474.1| hypothetical protein MSMEG_4195 [Mycobacterium smegmatis str. MC2 155] gi|118171333|gb|ABK72229.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=101 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/102 (67%), Positives = 85/102 (84%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MTV AD L+ EFA+EDI+TG+FASG+GQVGDG++FSFHIE + LV+E+YRPR++GP Sbjct 1 MTVAADVALS--HSEFAIEDITTGVFASGFGQVGDGKTFSFHIERQQLVIEVYRPRLSGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VP EDVVA+A R L +IDLTDERSLAA VRD+VA A P++R Sbjct 59 VPSEEDVVAVATRKLTEIDLTDERSLAATVRDAVADAQPLAR 100 >gi|120404456|ref|YP_954285.1| hypothetical protein Mvan_3484 [Mycobacterium vanbaalenii PYR-1] gi|119957274|gb|ABM14279.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=127 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/102 (66%), Positives = 83/102 (82%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MT+ AD +A + FAVE I+TG+ ASG+G++GDGRSFSFH+E ++LVVE+YRPR+ GP Sbjct 25 MTLAADSEVAGR--GFAVEVITTGVHASGFGELGDGRSFSFHMERQTLVVEVYRPRLRGP 82 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQAEDVVA A R L DID+TDERSL AAVRD++A A PV R Sbjct 83 VPQAEDVVATASRKLTDIDMTDERSLIAAVRDTIAHAQPVPR 124 >gi|108800125|ref|YP_640322.1| hypothetical protein Mmcs_3159 [Mycobacterium sp. MCS] gi|119869253|ref|YP_939205.1| hypothetical protein Mkms_3221 [Mycobacterium sp. KMS] gi|126435750|ref|YP_001071441.1| hypothetical protein Mjls_3171 [Mycobacterium sp. JLS] gi|108770544|gb|ABG09266.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695342|gb|ABL92415.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126235550|gb|ABN98950.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=103 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/102 (64%), Positives = 79/102 (78%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MT+ +RH +F EDISTG+ ASG+GQVGDGRSFSFH+E + LVVE+YRPR+ GP Sbjct 1 MTLVTERH--SDSTDFGFEDISTGVHASGFGQVGDGRSFSFHVERQHLVVEVYRPRLRGP 58 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VP +DVVA R L DIDL+DERSLAAAVRD+V +A PV+R Sbjct 59 VPTEDDVVATTTRRLTDIDLSDERSLAAAVRDAVRTAQPVAR 100 >gi|315443957|ref|YP_004076836.1| hypothetical protein Mspyr1_23580 [Mycobacterium sp. Spyr1] gi|315262260|gb|ADT99001.1| hypothetical protein Mspyr1_23580 [Mycobacterium sp. Spyr1] Length=127 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/102 (66%), Positives = 81/102 (80%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MT+TAD + + F VEDI+TG+ ASG+GQVGDGR+FSF++E + LVVEIYRPR+ GP Sbjct 25 MTLTADGAVTGR--GFRVEDITTGLHASGFGQVGDGRAFSFYVERQELVVEIYRPRLRGP 82 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQAEDVVA A R L DID+ DERS+ AAVRD VA A PV+R Sbjct 83 VPQAEDVVATANRRLTDIDINDERSVIAAVRDLVADAQPVAR 124 >gi|145223629|ref|YP_001134307.1| hypothetical protein Mflv_3042 [Mycobacterium gilvum PYR-GCK] gi|145216115|gb|ABP45519.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=107 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 67/102 (66%), Positives = 81/102 (80%), Gaps = 2/102 (1%) Query 36 MTVTADRHLADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGP 95 MT+TAD + + F VEDI+TG+ ASG+GQVGDGR+FSF++E + LVVEIYRPR+ GP Sbjct 5 MTLTADGAVTGR--GFRVEDITTGLHASGFGQVGDGRAFSFYVERQELVVEIYRPRLRGP 62 Query 96 VPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 VPQAEDVVA A R L DID+ DERS+ AAVRD VA A PV+R Sbjct 63 VPQAEDVVATANRRLTDIDINDERSVIAAVRDLVADAQPVAR 104 >gi|169629193|ref|YP_001702842.1| hypothetical protein MAB_2107 [Mycobacterium abscessus ATCC 19977] gi|169241160|emb|CAM62188.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=104 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/86 (59%), Positives = 59/86 (69%), Gaps = 0/86 (0%) Query 51 FAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGL 110 F VE + TG+ A+G+G+VGDGRSF+F IE L VEIYR VP DVVA R + Sbjct 9 FTVEVLVTGVHANGFGEVGDGRSFAFRIEDSLLRVEIYRAFRTELVPDDSDVVAGRTRPI 68 Query 111 VDIDLTDERSLAAAVRDSVASAAPVS 136 DID+TDERS+ AAVRD VA A PVS Sbjct 69 TDIDVTDERSIVAAVRDLVADAQPVS 94 >gi|333919621|ref|YP_004493202.1| hypothetical protein AS9A_1953 [Amycolicicoccus subflavus DQS3-9A1] gi|333481842|gb|AEF40402.1| hypothetical protein AS9A_1953 [Amycolicicoccus subflavus DQS3-9A1] Length=153 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/91 (44%), Positives = 59/91 (65%), Gaps = 5/91 (5%) Query 51 FAVEDISTGIFASGYGQVGDGRSFSFHI-----EHRSLVVEIYRPRVAGPVPQAEDVVAM 105 F ++D+S G +A G+GQ DGR+F+F + R+L VE+YR + VP D+ A Sbjct 42 FVIDDLSIGPYAHGFGQTRDGRTFAFQVRDSTLHRRTLHVEVYRADLETTVPDTSDIEAF 101 Query 106 AVRGLVDIDLTDERSLAAAVRDSVASAAPVS 136 R +VD+DL DERS++AAVRD+VA A ++ Sbjct 102 VDRSVVDVDLCDERSISAAVRDAVAEAESIA 132 >gi|54024888|ref|YP_119130.1| hypothetical protein nfa29190 [Nocardia farcinica IFM 10152] gi|54016396|dbj|BAD57766.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=115 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 42/90 (47%), Positives = 57/90 (64%), Gaps = 0/90 (0%) Query 45 ADKREEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVA 104 A++R F VE+++ G FA G+G DGR F+F +L +EIYR + VP EDVVA Sbjct 3 AEQRAGFTVEEVTVGRFAHGFGTTEDGRPFAFRTVRATLTLEIYRADLDTAVPAPEDVVA 62 Query 105 MAVRGLVDIDLTDERSLAAAVRDSVASAAP 134 +A + D+DL DERS+ A VRD + AAP Sbjct 63 VAEATVTDVDLDDERSVVALVRDLIPVAAP 92 >gi|226360037|ref|YP_002777815.1| hypothetical protein ROP_06230 [Rhodococcus opacus B4] gi|226238522|dbj|BAH48870.1| hypothetical protein [Rhodococcus opacus B4] Length=131 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/80 (49%), Positives = 54/80 (68%), Gaps = 0/80 (0%) Query 51 FAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGL 110 F VEDIS G A G+G+ +G S++F + ++ VE+YR V VP +DVVA A R + Sbjct 23 FTVEDISVGPHAHGFGRTAEGNSYAFRVRKSTMHVEVYRADVETEVPDPDDVVASARRSV 82 Query 111 VDIDLTDERSLAAAVRDSVA 130 +IDLTDERS+ A VRD+V+ Sbjct 83 REIDLTDERSIVAVVRDAVS 102 >gi|111017906|ref|YP_700878.1| hypothetical protein RHA1_ro00887 [Rhodococcus jostii RHA1] gi|110817436|gb|ABG92720.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=117 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 54/80 (68%), Gaps = 0/80 (0%) Query 51 FAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAVRGL 110 F VED++ G A G+G+ +G S++F + ++ VE+YR V VP +D+VA A R + Sbjct 9 FTVEDVTVGPHAHGFGRTAEGNSYAFRVRKSTMHVEVYRADVETEVPAPDDIVASARRSV 68 Query 111 VDIDLTDERSLAAAVRDSVA 130 +IDLTDERS+ A VRD+V+ Sbjct 69 REIDLTDERSIVAVVRDAVS 88 >gi|226306695|ref|YP_002766655.1| hypothetical protein RER_32080 [Rhodococcus erythropolis PR4] gi|226185812|dbj|BAH33916.1| hypothetical protein RER_32080 [Rhodococcus erythropolis PR4] Length=140 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/84 (48%), Positives = 52/84 (62%), Gaps = 1/84 (1%) Query 48 REEFAVEDISTGIFASGYGQVGDGRSFSFHIEHRSLVVEIYRPRVAGPVPQAEDVVAMAV 107 R F +ED++ G A G+G+ DGR+F+F + L VE+Y VP DVVA A Sbjct 18 RPGFEIEDLTVGAHAHGFGR-SDGRTFAFRVRKSVLFVEVYGEYCEHSVPTPSDVVATAE 76 Query 108 RGLVDIDLTDERSLAAAVRDSVAS 131 R + DIDLTDERS+A VRD+V S Sbjct 77 RSVTDIDLTDERSIAGVVRDAVLS 100 >gi|254775028|ref|ZP_05216544.1| hypothetical protein MaviaA2_10191 [Mycobacterium avium subsp. avium ATCC 25291] Length=36 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/36 (84%), Positives = 31/36 (87%), Gaps = 0/36 (0%) Query 102 VVAMAVRGLVDIDLTDERSLAAAVRDSVASAAPVSR 137 +VA AVR LVDIDLTDERSL AAVRDSVA A PVSR Sbjct 1 MVATAVRSLVDIDLTDERSLTAAVRDSVAHAEPVSR 36 >gi|229494845|ref|ZP_04388598.1| hypothetical protein RHOER0001_6502 [Rhodococcus erythropolis SK121] gi|229318203|gb|EEN84071.1| hypothetical protein RHOER0001_6502 [Rhodococcus erythropolis SK121] Length=90 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/49 (56%), Positives = 31/49 (64%), Gaps = 0/49 (0%) Query 83 LVVEIYRPRVAGPVPQAEDVVAMAVRGLVDIDLTDERSLAAAVRDSVAS 131 L VE+Y VP DVVA A R + DIDLTDERS+A VRD+V S Sbjct 2 LFVEVYGEYCEHSVPTPADVVATAERSVTDIDLTDERSIAGVVRDAVLS 50 >gi|340353666|ref|ZP_08676477.1| gfo/Idh/MocA family oxidoreductase [Prevotella pallens ATCC 700821] gi|339609088|gb|EGQ13965.1| gfo/Idh/MocA family oxidoreductase [Prevotella pallens ATCC 700821] Length=337 Score = 34.3 bits (77), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/66 (31%), Positives = 32/66 (49%), Gaps = 1/66 (1%) Query 24 PREMVLQRYSLGMTVTADRHLADKREEFAVEDISTGIFASGYGQVGDG-RSFSFHIEHRS 82 P ++ L +Y G+ V A + A++ + VED +F G G G SF+ H + Sbjct 198 PHQLDLLQYLFGIIVKAHGYTANRTGHYKVEDTVNAVFRFESGLCGSGSWSFAAHESAKE 257 Query 83 LVVEIY 88 +EIY Sbjct 258 DSIEIY 263 >gi|340351172|ref|ZP_08674140.1| gfo/Idh/MocA family oxidoreductase [Prevotella nigrescens ATCC 33563] gi|339606790|gb|EGQ11757.1| gfo/Idh/MocA family oxidoreductase [Prevotella nigrescens ATCC 33563] Length=328 Score = 33.9 bits (76), Expect = 8.7, Method: Compositional matrix adjust. Identities = 25/97 (26%), Positives = 41/97 (43%), Gaps = 3/97 (3%) Query 24 PREMVLQRYSLGMTVTADRHLADKREEFAVEDISTGIFASGYGQVGDG-RSFSFHIEHRS 82 P + L +Y G+ V A + A++ + VED +F G G G SF+ H + Sbjct 189 PHQFDLLQYLFGIIVKAHGYTANRTGHYKVEDTVNAVFRFEDGLCGSGSWSFAAHESAKE 248 Query 83 LVVEIY--RPRVAGPVPQAEDVVAMAVRGLVDIDLTD 117 +EIY R+ V E + G+ D+ + Sbjct 249 DSMEIYGTEGRIVFSVYDYEPITLYTSEGMKSFDIKN 285 Lambda K H 0.317 0.131 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128325363320 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40