BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2139
Length=357
Score E
Sequences producing significant alignments: (Bits) Value
gi|254364944|ref|ZP_04980990.1| dihydroorotate dehydrogenase pyr... 702 0.0
gi|15609276|ref|NP_216655.1| dihydroorotate dehydrogenase 2 [Myc... 701 0.0
gi|308375788|ref|ZP_07445116.2| dihydroorotate dehydrogenase pyr... 701 0.0
gi|339295056|gb|AEJ47167.1| dihydroorotate dehydrogenase pyrD [M... 701 0.0
gi|340627147|ref|YP_004745599.1| putative dihydroorotate dehydro... 701 0.0
gi|289762300|ref|ZP_06521678.1| dihydroorotate dehydrogenase pyr... 700 0.0
gi|121638021|ref|YP_978245.1| dihydroorotate dehydrogenase 2 [My... 700 0.0
gi|289745412|ref|ZP_06504790.1| dihydroorotate dehydrogenase 2 [... 699 0.0
gi|254232297|ref|ZP_04925624.1| dihydroorotate dehydrogenase pyr... 699 0.0
gi|308372150|ref|ZP_07427600.2| dihydroorotate dehydrogenase pyr... 692 0.0
gi|339298678|gb|AEJ50788.1| dihydroorotate dehydrogenase 2 [Myco... 690 0.0
gi|118617873|ref|YP_906205.1| dihydroorotate dehydrogenase 2 [My... 573 1e-161
gi|183983119|ref|YP_001851410.1| dihydroorotate dehydrogenase Py... 573 2e-161
gi|342859853|ref|ZP_08716506.1| dihydroorotate dehydrogenase 2 [... 567 9e-160
gi|15827665|ref|NP_301928.1| dihydroorotate dehydrogenase 2 [Myc... 560 1e-157
gi|13432239|sp|P46727.3|PYRD_MYCLE RecName: Full=Dihydroorotate ... 560 1e-157
gi|240171418|ref|ZP_04750077.1| dihydroorotate dehydrogenase 2 [... 559 3e-157
gi|289574821|ref|ZP_06455048.1| LOW QUALITY PROTEIN: dihydroorot... 548 8e-154
gi|333990396|ref|YP_004523010.1| dihydroorotate dehydrogenase Py... 546 2e-153
gi|254821417|ref|ZP_05226418.1| dihydroorotate dehydrogenase 2 [... 544 7e-153
gi|41407981|ref|NP_960817.1| dihydroorotate dehydrogenase 2 [Myc... 536 1e-150
gi|307084791|ref|ZP_07493904.1| dihydroorotate oxidase [Mycobact... 536 2e-150
gi|296165224|ref|ZP_06847771.1| dihydroorotate oxidase [Mycobact... 536 2e-150
gi|118465857|ref|YP_881556.1| dihydroorotate dehydrogenase 2 [My... 516 3e-144
gi|254775025|ref|ZP_05216541.1| dihydroorotate dehydrogenase 2 [... 515 3e-144
gi|108800128|ref|YP_640325.1| dihydroorotate dehydrogenase 2 [My... 513 2e-143
gi|120404459|ref|YP_954288.1| dihydroorotate dehydrogenase 2 [My... 509 3e-142
gi|467036|gb|AAA17221.1| pyrD [Mycobacterium leprae] 497 1e-138
gi|145223626|ref|YP_001134304.1| dihydroorotate dehydrogenase 2 ... 495 5e-138
gi|118467802|ref|YP_888477.1| dihydroorotate dehydrogenase 2 [My... 494 6e-138
gi|169629190|ref|YP_001702839.1| dihydroorotate dehydrogenase 2 ... 479 2e-133
gi|325676871|ref|ZP_08156544.1| dihydroorotate oxidase [Rhodococ... 455 4e-126
gi|312139680|ref|YP_004007016.1| dihydroorotate dehydrogenase py... 455 5e-126
gi|226306698|ref|YP_002766658.1| dihydroorotate dehydrogenase [R... 450 2e-124
gi|333919619|ref|YP_004493200.1| dihydroorotate dehydrogenase [A... 437 9e-121
gi|229494842|ref|ZP_04388595.1| dihydroorotate oxidase [Rhodococ... 434 1e-119
gi|326382263|ref|ZP_08203955.1| dihydroorotate dehydrogenase 2 [... 432 4e-119
gi|226360040|ref|YP_002777818.1| dihydroorotate dehydrogenase 2 ... 431 9e-119
gi|259507257|ref|ZP_05750157.1| dihydroorotate oxidase [Coryneba... 430 2e-118
gi|32479376|ref|NP_862229.1| dihydroorotate dehydrogenase 2 [Cor... 430 2e-118
gi|319949260|ref|ZP_08023340.1| dihydroorotate dehydrogenase 2 [... 430 2e-118
gi|311739447|ref|ZP_07713282.1| dihydroorotate oxidase [Coryneba... 429 3e-118
gi|227503621|ref|ZP_03933670.1| dihydroorotate dehydrogenase 2 [... 429 4e-118
gi|25028199|ref|NP_738253.1| dihydroorotate dehydrogenase 2 [Cor... 428 5e-118
gi|306836115|ref|ZP_07469101.1| dihydroorotate oxidase [Coryneba... 428 6e-118
gi|255325706|ref|ZP_05366803.1| dihydroorotate oxidase [Coryneba... 427 9e-118
gi|296139837|ref|YP_003647080.1| dihydroorotate dehydrogenase [T... 426 4e-117
gi|227504347|ref|ZP_03934396.1| dihydroorotate dehydrogenase 2 [... 425 5e-117
gi|68535430|ref|YP_250135.1| dihydroorotate dehydrogenase 2 [Cor... 425 5e-117
gi|344045025|gb|EGV40699.1| dihydroorotate dehydrogenase 2 [Cory... 425 6e-117
>gi|254364944|ref|ZP_04980990.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
str. Haarlem]
gi|134150458|gb|EBA42503.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
str. Haarlem]
Length=372
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 16 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 75
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 76 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 135
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 136 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 195
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 196 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 255
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 256 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 315
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 316 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 372
>gi|15609276|ref|NP_216655.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis H37Rv]
gi|15841630|ref|NP_336667.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis CDC1551]
gi|31793319|ref|NP_855812.1| dihydroorotate dehydrogenase 2 [Mycobacterium bovis AF2122/97]
46 more sequence titles
Length=357
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
>gi|308375788|ref|ZP_07445116.2| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
SUMu007]
gi|308377922|ref|ZP_07480933.2| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
SUMu009]
gi|308345178|gb|EFP34029.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
SUMu007]
gi|308354115|gb|EFP42966.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
SUMu009]
Length=370
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 14 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 73
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 74 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 133
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 134 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 193
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 194 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 253
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 254 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 313
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 314 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 370
>gi|339295056|gb|AEJ47167.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
CCDC5079]
Length=372
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/357 (99%), Positives = 356/357 (99%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 16 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 75
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 76 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 135
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 136 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 195
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 196 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 255
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 256 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 315
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHD GFGSLHEAVGSARRRQPS
Sbjct 316 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDSGFGSLHEAVGSARRRQPS 372
>gi|340627147|ref|YP_004745599.1| putative dihydroorotate dehydrogenase PyrD [Mycobacterium canettii
CIPT 140010059]
gi|340005337|emb|CCC44495.1| putative dihydroorotate dehydrogenase PyrD [Mycobacterium canettii
CIPT 140010059]
Length=357
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/357 (99%), Positives = 357/357 (100%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIAR+LHDGGFGSLHEAVGSARRRQPS
Sbjct 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARKLHDGGFGSLHEAVGSARRRQPS 357
>gi|289762300|ref|ZP_06521678.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
GM 1503]
gi|289709806|gb|EFD73822.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
GM 1503]
Length=357
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/357 (99%), Positives = 356/357 (99%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPG ISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 241 NTTVSRDGLTTPGVDRLGPGAISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
>gi|121638021|ref|YP_978245.1| dihydroorotate dehydrogenase 2 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990515|ref|YP_002645202.1| dihydroorotate dehydrogenase 2 [Mycobacterium bovis BCG str.
Tokyo 172]
gi|166199366|sp|A1KKI2.1|PYRD_MYCBP RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|254788895|sp|C1AQ55.1|PYRD_MYCBT RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|121493669|emb|CAL72144.1| dihydroorotate dehydrogenase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224773628|dbj|BAH26434.1| dihydroorotate dehydrogenase 2 [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602059|emb|CCC64733.1| dihydroorotate dehydrogenase [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=357
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/357 (99%), Positives = 356/357 (99%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPV RLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVCRLLRRLLGPTDPVLASTVFGVRFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
>gi|289745412|ref|ZP_06504790.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis 02_1987]
gi|289758259|ref|ZP_06517637.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis T85]
gi|294993145|ref|ZP_06798836.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis 210]
gi|298525634|ref|ZP_07013043.1| dihydroorotate dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
gi|289685940|gb|EFD53428.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis 02_1987]
gi|289713823|gb|EFD77835.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis T85]
gi|298495428|gb|EFI30722.1| dihydroorotate dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
gi|326903755|gb|EGE50688.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
W-148]
Length=357
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/357 (99%), Positives = 356/357 (99%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHD GFGSLHEAVGSARRRQPS
Sbjct 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDSGFGSLHEAVGSARRRQPS 357
>gi|254232297|ref|ZP_04925624.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
C]
gi|124601356|gb|EAY60366.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
C]
Length=357
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/357 (99%), Positives = 356/357 (99%), Gaps = 0/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA
Sbjct 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGARALAIRLARHRPEIPIGVNIGKT KTPAGDAVNDYRASARMVGPLASYLVVNVSSP
Sbjct 121 NHGARALAIRLARHRPEIPIGVNIGKTTKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA
Sbjct 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
>gi|308372150|ref|ZP_07427600.2| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
SUMu004]
gi|308334206|gb|EFP23057.1| dihydroorotate dehydrogenase pyrD [Mycobacterium tuberculosis
SUMu004]
Length=353
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/353 (99%), Positives = 353/353 (100%), Gaps = 0/353 (0%)
Query 5 VRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGL 64
+RRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGL
Sbjct 1 MRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGL 60
Query 65 AAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGA 124
AAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGA
Sbjct 61 AAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGA 120
Query 125 RALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPG 184
RALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPG
Sbjct 121 RALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPG 180
Query 185 LRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTV 244
LRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTV
Sbjct 181 LRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTV 240
Query 245 SRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERI 304
SRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERI
Sbjct 241 SRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERI 300
Query 305 TAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
TAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 301 TAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 353
>gi|339298678|gb|AEJ50788.1| dihydroorotate dehydrogenase 2 [Mycobacterium tuberculosis CCDC5180]
Length=353
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/353 (99%), Positives = 352/353 (99%), Gaps = 0/353 (0%)
Query 5 VRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGL 64
+RRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGL
Sbjct 1 MRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGL 60
Query 65 AAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGA 124
AAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGA
Sbjct 61 AAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGA 120
Query 125 RALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPG 184
RALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPG
Sbjct 121 RALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPG 180
Query 185 LRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTV 244
LRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTV
Sbjct 181 LRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTV 240
Query 245 SRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERI 304
SRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERI
Sbjct 241 SRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERI 300
Query 305 TAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
TAGASLLQGYTGFIYGGERWAKDIHEGIARRLHD GFGSLHEAVGSARRRQPS
Sbjct 301 TAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDSGFGSLHEAVGSARRRQPS 353
>gi|118617873|ref|YP_906205.1| dihydroorotate dehydrogenase 2 [Mycobacterium ulcerans Agy99]
gi|166199368|sp|A0PQW5.1|PYRD_MYCUA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|118569983|gb|ABL04734.1| dihydroorotate dehydrogenase PyrD [Mycobacterium ulcerans Agy99]
Length=360
Score = 573 bits (1477), Expect = 1e-161, Method: Compositional matrix adjust.
Identities = 299/360 (84%), Positives = 323/360 (90%), Gaps = 3/360 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+RRLLFL+PPE HKLVFAVLRG A PVRR+L R LGPTDPVLASTVFGVRFP
Sbjct 1 MYCLLRRLLFLLPPEWVHKLVFAVLRGATAATPVRRMLTRWLGPTDPVLASTVFGVRFPG 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGT L +W AMGFGYAE+GTVTAHPQPGNPAPRLFRL +DRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTGLDTWAAMGFGYAEVGTVTAHPQPGNPAPRLFRLPEDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA ALAIRLA H PE+P+GVNIGKTK TPA AV+DYRASAR+VGPLASYLVVNVSSP
Sbjct 121 NHGAGALAIRLACHHPEVPVGVNIGKTKTTPADQAVDDYRASARLVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AV AETSTPVLVKIAPDLSDSD+D++ADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILAAVLAETSTPVLVKIAPDLSDSDVDEVADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGL TPGV +LG GGISGPP+A+R+++VLRRLY RVGDRL LISVGGIETA+DA
Sbjct 241 NTTVSRDGLLTPGVGQLGAGGISGPPVAERSLEVLRRLYQRVGDRLTLISVGGIETAEDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS---ARRRQPS 357
W+RITAGASLLQGYTGFIYGG W+K IH+GIARRLH GGFGSLHEAVGS R R PS
Sbjct 301 WDRITAGASLLQGYTGFIYGGGLWSKHIHDGIARRLHQGGFGSLHEAVGSNAAERGRPPS 360
>gi|183983119|ref|YP_001851410.1| dihydroorotate dehydrogenase PyrD [Mycobacterium marinum M]
gi|226710770|sp|B2HFZ1.1|PYRD_MYCMM RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|183176445|gb|ACC41555.1| dihydroorotate dehydrogenase PyrD [Mycobacterium marinum M]
Length=360
Score = 573 bits (1477), Expect = 2e-161, Method: Compositional matrix adjust.
Identities = 299/360 (84%), Positives = 323/360 (90%), Gaps = 3/360 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+RRLLFL+PPE HKLVFAVLRG A PVRR+L R LGPTDPVLASTVFGVRFP
Sbjct 1 MYGLLRRLLFLLPPERVHKLVFAVLRGATAATPVRRMLTRWLGPTDPVLASTVFGVRFPG 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGT L +W AMGFGYAE+GTVTAHPQPGNPAPRLFRL +DRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGTGLDTWAAMGFGYAEVGTVTAHPQPGNPAPRLFRLPEDRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA ALAIRLARH PE+P+GVNIGKTK TPA AV+DYRASAR+VGPLASYLVVNVSSP
Sbjct 121 NHGAGALAIRLARHHPEVPVGVNIGKTKTTPADQAVDDYRASARLVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AV AETSTPVLVKIAPDLSDSD+D++ADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILAAVLAETSTPVLVKIAPDLSDSDVDEVADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGL TPGV +LG GGISGPP+A+R+++VL RLY RVGDRL LISVGGIETA+DA
Sbjct 241 NTTVSRDGLLTPGVGQLGAGGISGPPVAERSLEVLCRLYQRVGDRLTLISVGGIETAEDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS---ARRRQPS 357
W+RITAGASLLQGYTGFIYGG W+K IH+GIARRLH GGFGSLHEAVGS R R PS
Sbjct 301 WDRITAGASLLQGYTGFIYGGGLWSKHIHDGIARRLHQGGFGSLHEAVGSNAAERGRPPS 360
>gi|342859853|ref|ZP_08716506.1| dihydroorotate dehydrogenase 2 [Mycobacterium colombiense CECT
3035]
gi|342132985|gb|EGT86205.1| dihydroorotate dehydrogenase 2 [Mycobacterium colombiense CECT
3035]
Length=368
Score = 567 bits (1462), Expect = 9e-160, Method: Compositional matrix adjust.
Identities = 291/351 (83%), Positives = 312/351 (89%), Gaps = 0/351 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y L+RRL F+IPPE H LVFAVLRGV A RR LRRLL P DP LAS VFGVRFP
Sbjct 13 IYGLLRRLFFVIPPERIHTLVFAVLRGVTAAGWTRRALRRLLSPADPALASMVFGVRFPG 72
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG L +WGA+GFGYAEIGTVTA+PQPGNPAPR+FRL DRALLNRMGFN
Sbjct 73 PLGLAAGFDKDGLGLLTWGALGFGYAEIGTVTANPQPGNPAPRMFRLPADRALLNRMGFN 132
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA ALA+RL+R RPE+PIGVNIGKTK TPA AV+DYRASAR+VGPLASYLVVNVSSP
Sbjct 133 NLGAGALAMRLSRQRPEVPIGVNIGKTKVTPAEHAVDDYRASARLVGPLASYLVVNVSSP 192
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAV AETSTPVLVKIAPDLSDSD+D+IADLAV+L LAGIVAT
Sbjct 193 NTPGLRDLQAVESLRPILSAVLAETSTPVLVKIAPDLSDSDVDEIADLAVKLGLAGIVAT 252
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSR GL TPGVD LGPGGISGPP+A+RAV+VLRRLY RVGDRL LISVGGIETADDA
Sbjct 253 NTTVSRQGLNTPGVDELGPGGISGPPVARRAVEVLRRLYGRVGDRLVLISVGGIETADDA 312
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSA 351
WERITAGASLLQGYTGFIYGG WAK IH+GIA+RLHDGGF SL +AVGSA
Sbjct 313 WERITAGASLLQGYTGFIYGGGLWAKRIHQGIAQRLHDGGFASLADAVGSA 363
>gi|15827665|ref|NP_301928.1| dihydroorotate dehydrogenase 2 [Mycobacterium leprae TN]
gi|221230142|ref|YP_002503558.1| dihydroorotate dehydrogenase 2 [Mycobacterium leprae Br4923]
gi|13093216|emb|CAC31674.1| dihydroorotate dehydrogenase [Mycobacterium leprae]
gi|219933249|emb|CAR71388.1| dihydroorotate dehydrogenase [Mycobacterium leprae Br4923]
Length=357
Score = 560 bits (1444), Expect = 1e-157, Method: Compositional matrix adjust.
Identities = 284/355 (80%), Positives = 311/355 (88%), Gaps = 0/355 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY +VRRLLFL PPE H LVFA+LR V ++A +RRLLR +LGPTDPVLASTVFGVRFP
Sbjct 2 MYRVVRRLLFLTPPERIHTLVFAMLRCVTSIAVLRRLLRWVLGPTDPVLASTVFGVRFPG 61
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG L +WGA+GFGYAE+GTVTA+PQPGNPAPR+FRL DRALLNRMGFN
Sbjct 62 PLGLAAGFDKDGMGLLAWGALGFGYAEVGTVTAYPQPGNPAPRMFRLPADRALLNRMGFN 121
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N+GA ALAI+LA HRPE+PIGVNI KTK TPA V+DYRASAR+VGPLASYLVVNVSSP
Sbjct 122 NNGAGALAIQLAHHRPEVPIGVNISKTKATPASHTVDDYRASARLVGPLASYLVVNVSSP 181
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLR IL V AETS PVLVKIAPD+SDS++DDI DLAVEL LAGIVAT
Sbjct 182 NTPGLRDLQAVESLRAILLGVLAETSVPVLVKIAPDISDSEIDDITDLAVELRLAGIVAT 241
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRD L TPG+D LG GGISGPP+A+RAV+VLRRLY RVGDRL LISVGGIETADDA
Sbjct 242 NTTVSRDCLVTPGIDALGAGGISGPPVARRAVEVLRRLYGRVGDRLVLISVGGIETADDA 301
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQ 355
W+RITAGASLLQGYTGFIYGG W K IH+GIARRLHDGGF SL +AVGSA +
Sbjct 302 WDRITAGASLLQGYTGFIYGGGFWPKHIHDGIARRLHDGGFASLRDAVGSATAKS 356
>gi|13432239|sp|P46727.3|PYRD_MYCLE RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
Length=356
Score = 560 bits (1444), Expect = 1e-157, Method: Compositional matrix adjust.
Identities = 284/355 (80%), Positives = 311/355 (88%), Gaps = 0/355 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY +VRRLLFL PPE H LVFA+LR V ++A +RRLLR +LGPTDPVLASTVFGVRFP
Sbjct 1 MYRVVRRLLFLTPPERIHTLVFAMLRCVTSIAVLRRLLRWVLGPTDPVLASTVFGVRFPG 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG L +WGA+GFGYAE+GTVTA+PQPGNPAPR+FRL DRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGMGLLAWGALGFGYAEVGTVTAYPQPGNPAPRMFRLPADRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N+GA ALAI+LA HRPE+PIGVNI KTK TPA V+DYRASAR+VGPLASYLVVNVSSP
Sbjct 121 NNGAGALAIQLAHHRPEVPIGVNISKTKATPASHTVDDYRASARLVGPLASYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLR IL V AETS PVLVKIAPD+SDS++DDI DLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRAILLGVLAETSVPVLVKIAPDISDSEIDDITDLAVELRLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRD L TPG+D LG GGISGPP+A+RAV+VLRRLY RVGDRL LISVGGIETADDA
Sbjct 241 NTTVSRDCLVTPGIDALGAGGISGPPVARRAVEVLRRLYGRVGDRLVLISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQ 355
W+RITAGASLLQGYTGFIYGG W K IH+GIARRLHDGGF SL +AVGSA +
Sbjct 301 WDRITAGASLLQGYTGFIYGGGFWPKHIHDGIARRLHDGGFASLRDAVGSATAKS 355
>gi|240171418|ref|ZP_04750077.1| dihydroorotate dehydrogenase 2 [Mycobacterium kansasii ATCC 12478]
Length=370
Score = 559 bits (1440), Expect = 3e-157, Method: Compositional matrix adjust.
Identities = 297/354 (84%), Positives = 318/354 (90%), Gaps = 0/354 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y LVRRLLFL+PPE AH VFA+LR V AVAP RR+L R LGPTDPVLASTVFGVRFP
Sbjct 11 IYSLVRRLLFLLPPERAHTFVFALLRAVTAVAPARRMLSRWLGPTDPVLASTVFGVRFPG 70
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDGT L +WGA+GFGYAE+GTVTA PQPGNP PR+FRL DRALLNRMGFN
Sbjct 71 PLGLAAGFDKDGTGLDTWGALGFGYAEVGTVTARPQPGNPPPRMFRLPADRALLNRMGFN 130
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA ALAIRL RHRP +PIGVNIGK+K TPAG+AV+DYRASAR+VGPLA+YLVVNVSSP
Sbjct 131 NHGAGALAIRLTRHRPRVPIGVNIGKSKATPAGEAVDDYRASARLVGPLAAYLVVNVSSP 190
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AV AETSTPVLVKIAPDLSDSD+DDIADLAVEL LAGIVAT
Sbjct 191 NTPGLRDLQAVESLRPILTAVLAETSTPVLVKIAPDLSDSDIDDIADLAVELGLAGIVAT 250
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGL TPGVD LG GGISGPP+A RAVQVLRRL RVGDRL LISVGGIET DDA
Sbjct 251 NTTVSRDGLATPGVDELGAGGISGPPVAARAVQVLRRLQHRVGDRLVLISVGGIETVDDA 310
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRR 354
WERITAGA+LLQGYTGFIYGG WAK IH+GIARRLHDGGF SL +AVGSA R+
Sbjct 311 WERITAGATLLQGYTGFIYGGGLWAKHIHDGIARRLHDGGFASLADAVGSAARK 364
>gi|289574821|ref|ZP_06455048.1| LOW QUALITY PROTEIN: dihydroorotate dehydrogenase pyrD [Mycobacterium
tuberculosis K85]
gi|289539252|gb|EFD43830.1| LOW QUALITY PROTEIN: dihydroorotate dehydrogenase pyrD [Mycobacterium
tuberculosis K85]
Length=346
Score = 548 bits (1411), Expect = 8e-154, Method: Compositional matrix adjust.
Identities = 276/277 (99%), Positives = 276/277 (99%), Gaps = 0/277 (0%)
Query 81 MGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLARHRPEIPI 140
GFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLARHRPEIPI
Sbjct 70 WGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLARHRPEIPI 129
Query 141 GVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSA 200
GVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSA
Sbjct 130 GVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSA 189
Query 201 VRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTPGVDRLGPG 260
VRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTPGVDRLGPG
Sbjct 190 VRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTPGVDRLGPG 249
Query 261 GISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYG 320
GISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYG
Sbjct 250 GISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYG 309
Query 321 GERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
GERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 310 GERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 346
>gi|333990396|ref|YP_004523010.1| dihydroorotate dehydrogenase PyrD [Mycobacterium sp. JDM601]
gi|333486364|gb|AEF35756.1| dihydroorotate dehydrogenase PyrD [Mycobacterium sp. JDM601]
Length=355
Score = 546 bits (1406), Expect = 2e-153, Method: Compositional matrix adjust.
Identities = 277/353 (79%), Positives = 304/353 (87%), Gaps = 0/353 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y +RR LFL PPE +H FA LRG A++P RR+LRR L P DP+LASTVFGVRFP
Sbjct 3 LYGALRRALFLAPPERSHTFAFAALRGATALSPTRRVLRRRLAPHDPILASTVFGVRFPG 62
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG L +WGA+GFGYAE+GTVTA PQPGNPAPRLFRL DDRALLNRMGFN
Sbjct 63 PLGLAAGFDKDGVGLKAWGALGFGYAEVGTVTAAPQPGNPAPRLFRLPDDRALLNRMGFN 122
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA ALA RLARH ++PIGVNIGKTK TPA DAV DYRASAR++ PLA YLVVNVSSP
Sbjct 123 NQGAGALATRLARHHADVPIGVNIGKTKTTPAEDAVADYRASARLLAPLADYLVVNVSSP 182
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVE+LRPIL+AVRAET+ PVLVKIAPDL+D+DLD +ADLAVEL LAGIVAT
Sbjct 183 NTPGLRDLQAVEALRPILAAVRAETTRPVLVKIAPDLADTDLDAVADLAVELGLAGIVAT 242
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSR GL TPGV LGPGGISGPP+A+RA++VLRRLY RVGDRL LISVGGIETADDA
Sbjct 243 NTTVSRAGLATPGVADLGPGGISGPPVARRALEVLRRLYARVGDRLVLISVGGIETADDA 302
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
WERITAGASLLQGYTGFIYGG WA++IH G+A RL GGF SL EAVGSA R
Sbjct 303 WERITAGASLLQGYTGFIYGGGLWARNIHHGLADRLRAGGFASLSEAVGSAAR 355
>gi|254821417|ref|ZP_05226418.1| dihydroorotate dehydrogenase 2 [Mycobacterium intracellulare
ATCC 13950]
Length=366
Score = 544 bits (1402), Expect = 7e-153, Method: Compositional matrix adjust.
Identities = 286/353 (82%), Positives = 310/353 (88%), Gaps = 0/353 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y L+R+L F+IPPE H LVF LRGV AVA RR LRRLL PTDP LASTVFGV FP
Sbjct 13 LYGLLRQLFFVIPPERIHTLVFGFLRGVTAVAWARRALRRLLAPTDPALASTVFGVCFPG 72
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG + +WGA+GFG+AE+GTVTAHPQPGNPAPR+FRL DRALLNRMGFN
Sbjct 73 PLGLAAGFDKDGLGVLTWGALGFGHAEVGTVTAHPQPGNPAPRMFRLPADRALLNRMGFN 132
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA ALA+RLAR +PE+PIGVNIGKTK TPA AV+DYRASAR+VGPLASYLVVNVSSP
Sbjct 133 NLGAGALAMRLARQQPEVPIGVNIGKTKATPADQAVDDYRASARLVGPLASYLVVNVSSP 192
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPILSAV AET+TPVLVKIAPDLSD+D+D IADLAVEL LAGIVAT
Sbjct 193 NTPGLRDLQAVESLRPILSAVLAETTTPVLVKIAPDLSDADVDAIADLAVELGLAGIVAT 252
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTT+SR GL TPGVD LG GGISGPP+A+RAV VLRRLY RVGDRL LISVGGIE ADDA
Sbjct 253 NTTISRQGLRTPGVDELGAGGISGPPVARRAVDVLRRLYGRVGDRLVLISVGGIENADDA 312
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
WERITAGASLLQGYTGFIYGG WAK IH+G+ARRLHDGGF SL EAVG+A R
Sbjct 313 WERITAGASLLQGYTGFIYGGGLWAKQIHDGVARRLHDGGFASLSEAVGAAAR 365
>gi|41407981|ref|NP_960817.1| dihydroorotate dehydrogenase 2 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|73913688|sp|Q73YS2.1|PYRD_MYCPA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|41396335|gb|AAS04200.1| PyrD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461981|gb|EGO40831.1| dihydroorotate dehydrogenase, subfamily 2 [Mycobacterium avium
subsp. paratuberculosis S397]
Length=370
Score = 536 bits (1382), Expect = 1e-150, Method: Compositional matrix adjust.
Identities = 288/354 (82%), Positives = 310/354 (88%), Gaps = 0/354 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y + R+L FL+P E H LVFA+LRGV AV RRLLRRLL PTDPVLASTVFGVRFP P
Sbjct 16 YGVARQLFFLVPAERIHTLVFALLRGVTAVGWPRRLLRRLLAPTDPVLASTVFGVRFPGP 75
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDKDG L +WGA+GFGYAEIGTVTA PQPGNPAPRLFRL DRALLNRMGFNN
Sbjct 76 LGLAAGFDKDGLGLHAWGALGFGYAEIGTVTAGPQPGNPAPRLFRLPADRALLNRMGFNN 135
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA ALA+RLAR +P+IPIGVNIGKTK TP AV+DYRASAR++GPLASYLVVNVSSPN
Sbjct 136 LGAGALAVRLARRQPDIPIGVNIGKTKATPPDQAVDDYRASARLLGPLASYLVVNVSSPN 195
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAV SLRPILSAV AETSTPVLVKIAPDLSDSD+DDIADLAVEL LAGIVATN
Sbjct 196 TPGLRDLQAVGSLRPILSAVLAETSTPVLVKIAPDLSDSDVDDIADLAVELGLAGIVATN 255
Query 242 TTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAW 301
TTVSRDGL T GVD+LG GGISGPP+A+RAV+VLRRLY RVGDRL LISVGGIETAD AW
Sbjct 256 TTVSRDGLRTAGVDQLGAGGISGPPVARRAVEVLRRLYGRVGDRLVLISVGGIETADHAW 315
Query 302 ERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQ 355
ERITAGASLLQGYTGF+YGG WAK IH+GIA+RL DGGF SL +AVGS+ R
Sbjct 316 ERITAGASLLQGYTGFVYGGGLWAKQIHDGIAQRLRDGGFASLRDAVGSSARES 369
>gi|307084791|ref|ZP_07493904.1| dihydroorotate oxidase [Mycobacterium tuberculosis SUMu012]
gi|308365625|gb|EFP54476.1| dihydroorotate oxidase [Mycobacterium tuberculosis SUMu012]
Length=272
Score = 536 bits (1381), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 272/272 (100%), Positives = 272/272 (100%), Gaps = 0/272 (0%)
Query 86 AEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLARHRPEIPIGVNIG 145
AEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLARHRPEIPIGVNIG
Sbjct 1 AEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLARHRPEIPIGVNIG 60
Query 146 KTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSAVRAET 205
KTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSAVRAET
Sbjct 61 KTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSAVRAET 120
Query 206 STPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTPGVDRLGPGGISGP 265
STPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTPGVDRLGPGGISGP
Sbjct 121 STPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTPGVDRLGPGGISGP 180
Query 266 PLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYGGERWA 325
PLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYGGERWA
Sbjct 181 PLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYGGERWA 240
Query 326 KDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 357
KDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
Sbjct 241 KDIHEGIARRLHDGGFGSLHEAVGSARRRQPS 272
>gi|296165224|ref|ZP_06847771.1| dihydroorotate oxidase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899413|gb|EFG78872.1| dihydroorotate oxidase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=364
Score = 536 bits (1381), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 290/357 (82%), Positives = 311/357 (88%), Gaps = 3/357 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y LVRRL FL+PPE H +VFAVLRG + RRLL RLLGP DP LASTVFGVRFP
Sbjct 2 VYGLVRRLFFLLPPERIHTMVFAVLRGATVLGFKRRLLHRLLGPGDPALASTVFGVRFPG 61
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG L +WGA+GFGYAE+GTVTA+ QPGNP PR+FRL DRALLNRMGFN
Sbjct 62 PLGLAAGFDKDGKGLMTWGALGFGYAEVGTVTANAQPGNPPPRMFRLPADRALLNRMGFN 121
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA ALA++LARHRP+IPIGVNIGKTK TPA DAV DYRASAR+VGPLASYLVVNVSSP
Sbjct 122 NLGAGALAVQLARHRPDIPIGVNIGKTKTTPAADAVGDYRASARLVGPLASYLVVNVSSP 181
Query 181 NTPGLRDLQAVESLRPILSAVRAE---TSTPVLVKIAPDLSDSDLDDIADLAVELDLAGI 237
NTPGLRDLQAVESLRPILSAV AE TSTPVLVKIAPDLSD+DLDD+ADLAVEL LAGI
Sbjct 182 NTPGLRDLQAVESLRPILSAVLAEASVTSTPVLVKIAPDLSDADLDDVADLAVELGLAGI 241
Query 238 VATNTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETA 297
VATNTTVSRDGL TPGVD LGPGGISGPP+A+RA +VLRRLY RVGDRL LISVGGIETA
Sbjct 242 VATNTTVSRDGLKTPGVDALGPGGISGPPVARRATEVLRRLYARVGDRLVLISVGGIETA 301
Query 298 DDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRR 354
DDAWERITAGASLLQGYTGFIYGG W K IH+GIARRL +GGF SL +AVGSA R
Sbjct 302 DDAWERITAGASLLQGYTGFIYGGGLWPKRIHDGIARRLREGGFASLSDAVGSAAPR 358
>gi|118465857|ref|YP_881556.1| dihydroorotate dehydrogenase 2 [Mycobacterium avium 104]
gi|118167144|gb|ABK68041.1| dihydroorotate oxidase [Mycobacterium avium 104]
Length=353
Score = 516 bits (1328), Expect = 3e-144, Method: Compositional matrix adjust.
Identities = 286/352 (82%), Positives = 307/352 (88%), Gaps = 0/352 (0%)
Query 4 LVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLG 63
+ R+L FL+P E H LVFA+LRGV AV RRLLRRLL PTDPVLASTVFGVRFP PLG
Sbjct 1 MARQLFFLVPAERIHTLVFALLRGVTAVGWPRRLLRRLLAPTDPVLASTVFGVRFPGPLG 60
Query 64 LAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHG 123
LAAGFDKDG L +WGA+GFGYAEIGTVTA PQPGNPAPRLFRL DRALLNRM FNN G
Sbjct 61 LAAGFDKDGLGLHAWGALGFGYAEIGTVTAGPQPGNPAPRLFRLPADRALLNRMSFNNLG 120
Query 124 ARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTP 183
A ALA+RLAR +P+IPIGVNIGKTK TP AV+DYRASAR++GPLASYLVVNVSSPNTP
Sbjct 121 AGALAVRLARRQPDIPIGVNIGKTKATPPDQAVDDYRASARLLGPLASYLVVNVSSPNTP 180
Query 184 GLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTT 243
GLRDLQAV SLRPILSAV AETSTPVLVKIAPD+SDSD+DDIADLAVEL LAGIVATNTT
Sbjct 181 GLRDLQAVGSLRPILSAVLAETSTPVLVKIAPDVSDSDVDDIADLAVELGLAGIVATNTT 240
Query 244 VSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWER 303
VSRDGL T GVD LG GGISGPP+A+RAV+VLRRLY RVGDRL LI VGGIETADDAWER
Sbjct 241 VSRDGLRTAGVDELGAGGISGPPVARRAVEVLRRLYGRVGDRLVLIGVGGIETADDAWER 300
Query 304 ITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQ 355
ITAGASLLQGYTGF+YGG WAK IH+GIA+RL DGGF SL +AVGSA R
Sbjct 301 ITAGASLLQGYTGFVYGGGLWAKQIHDGIAQRLRDGGFASLRDAVGSAARES 352
>gi|254775025|ref|ZP_05216541.1| dihydroorotate dehydrogenase 2 [Mycobacterium avium subsp. avium
ATCC 25291]
Length=353
Score = 515 bits (1327), Expect = 3e-144, Method: Compositional matrix adjust.
Identities = 285/352 (81%), Positives = 307/352 (88%), Gaps = 0/352 (0%)
Query 4 LVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLG 63
+ R+L FL+P E H LVFA+LRGV AV RRLLRRLL PTDPVLASTVFGVRFP PLG
Sbjct 1 MARQLFFLVPAERIHTLVFALLRGVTAVGWPRRLLRRLLAPTDPVLASTVFGVRFPGPLG 60
Query 64 LAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHG 123
LAAGFDKDG L +WGA+GFGYAEIGTVTA PQPGNPAPRLFRL DRALLNRM FNN G
Sbjct 61 LAAGFDKDGLGLHAWGALGFGYAEIGTVTAGPQPGNPAPRLFRLPADRALLNRMSFNNLG 120
Query 124 ARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTP 183
A ALA+RLAR +P+IPIGVNIGKTK TP AV+DYRASAR++GPLASYLVVNVSSPNTP
Sbjct 121 AGALAVRLARRQPDIPIGVNIGKTKATPPDQAVDDYRASARLLGPLASYLVVNVSSPNTP 180
Query 184 GLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTT 243
GLRDLQAV SLRPILSAV AETSTPVLVKIAPD+SDSD+DDIADLAVEL LAGIVATNTT
Sbjct 181 GLRDLQAVGSLRPILSAVLAETSTPVLVKIAPDVSDSDVDDIADLAVELGLAGIVATNTT 240
Query 244 VSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWER 303
VSRDGL T G+D LG GGISGPP+A+RAV+VLRRLY RVGDRL LI VGGIETADDAWER
Sbjct 241 VSRDGLRTAGIDELGAGGISGPPVARRAVEVLRRLYGRVGDRLVLIGVGGIETADDAWER 300
Query 304 ITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQ 355
ITAGASLLQGYTGF+YGG WAK IH+GIA+RL DGGF SL +AVGSA R
Sbjct 301 ITAGASLLQGYTGFVYGGGLWAKQIHDGIAQRLRDGGFASLRDAVGSAARES 352
>gi|108800128|ref|YP_640325.1| dihydroorotate dehydrogenase 2 [Mycobacterium sp. MCS]
gi|119869256|ref|YP_939208.1| dihydroorotate dehydrogenase 2 [Mycobacterium sp. KMS]
gi|126435753|ref|YP_001071444.1| dihydroorotate dehydrogenase 2 [Mycobacterium sp. JLS]
6 more sequence titles
Length=356
Score = 513 bits (1321), Expect = 2e-143, Method: Compositional matrix adjust.
Identities = 262/353 (75%), Positives = 294/353 (84%), Gaps = 0/353 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y +RR+LFLI PE H VFA+LR V +RR L+ L P DPVLASTVFGVRFP P
Sbjct 4 YHALRRVLFLISPERIHTWVFALLRAVTTPDLLRRALQGRLAPRDPVLASTVFGVRFPGP 63
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDKDG L +W A+GFGYAE+GTVTAHPQPGNP PRLFRL +DRALLNRMGFNN
Sbjct 64 LGLAAGFDKDGRGLHTWPALGFGYAEVGTVTAHPQPGNPEPRLFRLPEDRALLNRMGFNN 123
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA LA RL RH + P+GVNIGKTK TPA AV DY SAR +GPLA++LVVNVSSPN
Sbjct 124 DGAARLAQRLTRHTSDAPVGVNIGKTKATPADRAVEDYAQSARQLGPLATFLVVNVSSPN 183
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAVESLRPIL+AVRA+TSTPVLVKIAPDLSD+D+D+IADLAVEL LAGIVATN
Sbjct 184 TPGLRDLQAVESLRPILTAVRAQTSTPVLVKIAPDLSDADVDEIADLAVELGLAGIVATN 243
Query 242 TTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAW 301
TT+SR GL TPGV+ LGPGG+SG P+A R+++VLRRLY R GDRL LISVGGIETADDAW
Sbjct 244 TTISRAGLKTPGVEELGPGGVSGAPVAARSLEVLRRLYRRAGDRLVLISVGGIETADDAW 303
Query 302 ERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRR 354
ERIT+GASLLQGYTGF+YGG WAK IH+G+A RL GF SL +AVGSA R+
Sbjct 304 ERITSGASLLQGYTGFVYGGGLWAKHIHDGLATRLRAEGFTSLSDAVGSAMRQ 356
>gi|120404459|ref|YP_954288.1| dihydroorotate dehydrogenase 2 [Mycobacterium vanbaalenii PYR-1]
gi|166199369|sp|A1TAT2.1|PYRD_MYCVP RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|119957277|gb|ABM14282.1| dihydroorotate oxidase A [Mycobacterium vanbaalenii PYR-1]
Length=353
Score = 509 bits (1310), Expect = 3e-142, Method: Compositional matrix adjust.
Identities = 263/353 (75%), Positives = 292/353 (83%), Gaps = 0/353 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY +R+ FL+PPE H VFA LR PVRR L R L P DP+LASTVFG RFP
Sbjct 1 MYAALRKAFFLVPPERIHTWVFAGLRAATTAEPVRRRLARRLAPHDPILASTVFGTRFPG 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG + +WGA+GFGYAE+GTVTA QPGNPAPRLFRL DRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGIGVHAWGALGFGYAEVGTVTAQAQPGNPAPRLFRLPADRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA ALA++L R ++PIGVNIGKTK TP A DY SAR++GPLA+YLVVNVSSP
Sbjct 121 NHGAGALAVQLTRTSSDVPIGVNIGKTKVTPPEHAAEDYAESARLLGPLAAYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQ+VESLRPILSAV AETSTPVLVKIAPDL+D D+D+IADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQSVESLRPILSAVLAETSTPVLVKIAPDLADQDIDEIADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTT+SR GL TPGVD LGPGGISGPP+A+RA++VLRRLY RVGDRL LISVGGIETADDA
Sbjct 241 NTTISRAGLATPGVDALGPGGISGPPVARRALEVLRRLYARVGDRLVLISVGGIETADDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
WERI +GASLLQGYTGF+YGG WAKDI++G+A RL GF L EAVGSA R
Sbjct 301 WERIVSGASLLQGYTGFVYGGGLWAKDINDGLAARLRGHGFSGLAEAVGSAAR 353
>gi|467036|gb|AAA17221.1| pyrD [Mycobacterium leprae]
Length=309
Score = 497 bits (1279), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 251/308 (82%), Positives = 273/308 (89%), Gaps = 0/308 (0%)
Query 48 VLASTVFGVRFPAPLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRL 107
+LASTVFGVRFP PLGLAAGFDKDG L +WGA+GFGYAE+GTVTA+PQPGNPAPR+FRL
Sbjct 1 MLASTVFGVRFPGPLGLAAGFDKDGMGLLAWGALGFGYAEVGTVTAYPQPGNPAPRMFRL 60
Query 108 ADDRALLNRMGFNNHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVG 167
DRALLNRMGFNN+GA ALAI+LA HRPE+PIGVNI KTK TPA V+DYRASAR+VG
Sbjct 61 PADRALLNRMGFNNNGAGALAIQLAHHRPEVPIGVNISKTKATPASHTVDDYRASARLVG 120
Query 168 PLASYLVVNVSSPNTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIAD 227
PLASYLVVNVSSPNTPGLRDLQAVESLR IL V AETS PVLVKIAPD+SDS++DDI D
Sbjct 121 PLASYLVVNVSSPNTPGLRDLQAVESLRAILLGVLAETSVPVLVKIAPDISDSEIDDITD 180
Query 228 LAVELDLAGIVATNTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLA 287
LAVEL LAGIVATNTTVSRD L TPG+D LG GGISGPP+A+RAV+VLRRLY RVGDRL
Sbjct 181 LAVELRLAGIVATNTTVSRDCLVTPGIDALGAGGISGPPVARRAVEVLRRLYGRVGDRLV 240
Query 288 LISVGGIETADDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEA 347
LISVGGIETADDAW+RITAGASLLQGYTGFIYGG W K IH+GIARRLHDGGF SL +A
Sbjct 241 LISVGGIETADDAWDRITAGASLLQGYTGFIYGGGFWPKHIHDGIARRLHDGGFASLRDA 300
Query 348 VGSARRRQ 355
VGSA +
Sbjct 301 VGSATAKS 308
>gi|145223626|ref|YP_001134304.1| dihydroorotate dehydrogenase 2 [Mycobacterium gilvum PYR-GCK]
gi|315443954|ref|YP_004076833.1| dihydroorotate oxidase A [Mycobacterium sp. Spyr1]
gi|189038431|sp|A4TB97.1|PYRD_MYCGI RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|145216112|gb|ABP45516.1| dihydroorotate oxidase A [Mycobacterium gilvum PYR-GCK]
gi|315262257|gb|ADT98998.1| dihydroorotate oxidase A [Mycobacterium sp. Spyr1]
Length=353
Score = 495 bits (1274), Expect = 5e-138, Method: Compositional matrix adjust.
Identities = 261/353 (74%), Positives = 296/353 (84%), Gaps = 0/353 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY +R+ LFL+PPE H LVFA LR P+RR L R L P DPVLASTVFGVRFP
Sbjct 1 MYGALRKALFLVPPERIHGLVFAGLRAATTPVPLRRSLSRRLAPHDPVLASTVFGVRFPG 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG + +WGA+GFGYAE+GTVTA QPGNP PR+FRL DRALLNRMGFN
Sbjct 61 PLGLAAGFDKDGLGVHTWGALGFGYAELGTVTAQAQPGNPPPRMFRLPADRALLNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHG+ ALA++LAR ++PIGVNIGKTK T DA DY SAR++G LA+YLVVNVSSP
Sbjct 121 NHGSAALALQLARSSSDVPIGVNIGKTKVTEPQDAPADYAESARLLGSLAAYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQ+VESLRPILSAV AETSTPVLVKIAPDL+D+D+DDIADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQSVESLRPILSAVLAETSTPVLVKIAPDLADTDIDDIADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTT+SRDGL TPG LG GGISGPP+A+RA++VLRRLY RVGD+L LISVGGIET+DDA
Sbjct 241 NTTISRDGLKTPGAADLGAGGISGPPVARRALEVLRRLYARVGDKLVLISVGGIETSDDA 300
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
WERITAGASLLQGYTGF+YGG WA+ I++G+A RL + GFG+L EAVGSA R
Sbjct 301 WERITAGASLLQGYTGFVYGGGLWARSINDGVAARLRENGFGTLAEAVGSAAR 353
>gi|118467802|ref|YP_888477.1| dihydroorotate dehydrogenase 2 [Mycobacterium smegmatis str.
MC2 155]
gi|189038432|sp|A0QZY9.1|PYRD_MYCS2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|118169089|gb|ABK69985.1| dihydroorotate oxidase [Mycobacterium smegmatis str. MC2 155]
Length=354
Score = 494 bits (1273), Expect = 6e-138, Method: Compositional matrix adjust.
Identities = 264/353 (75%), Positives = 295/353 (84%), Gaps = 0/353 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY ++RR LFL P E H VFA+LR V AP+R L RLL P DP+LASTVFGV FP
Sbjct 2 MYRVLRRALFLAPAERVHVWVFALLRAVTWAAPLRAALARLLAPRDPILASTVFGVHFPG 61
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+G L++WGA+GFGYAE+GTVTA PQPGNPAPRLFRL DD ALLNRMGFN
Sbjct 62 PLGLAAGFDKNGRGLAAWGALGFGYAEVGTVTAQPQPGNPAPRLFRLPDDHALLNRMGFN 121
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA ALA RL R + +IPIGVNIGKTK TPA +AV DY SAR++ LAS++VVNVSSP
Sbjct 122 NEGAGALAQRLTRGKSDIPIGVNIGKTKVTPAEEAVADYVTSARLLNSLASFVVVNVSSP 181
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAV +LRPIL+AV+AET+ PVLVKIAPDLSDSD+D+IADLAVEL LAGIVAT
Sbjct 182 NTPGLRDLQAVAALRPILAAVKAETTKPVLVKIAPDLSDSDIDEIADLAVELGLAGIVAT 241
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTTVSRDGL TPGV LGPGGISG P+A+R+ +VLRRLY RVGD+L LISVGGIETADDA
Sbjct 242 NTTVSRDGLLTPGVADLGPGGISGRPVARRSAEVLRRLYRRVGDKLVLISVGGIETADDA 301
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
WERI +GASLLQGYTGFIYGG WAK IH+GIA RL GF +L EAVGSA R
Sbjct 302 WERIVSGASLLQGYTGFIYGGGLWAKHIHDGIAGRLRACGFTTLSEAVGSAVR 354
>gi|169629190|ref|YP_001702839.1| dihydroorotate dehydrogenase 2 [Mycobacterium abscessus ATCC
19977]
gi|226724740|sp|B1MPD4.1|PYRD_MYCA9 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|169241157|emb|CAM62185.1| Probable dihydroorotate dehydrogenase [Mycobacterium abscessus]
Length=353
Score = 479 bits (1234), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 246/351 (71%), Positives = 275/351 (79%), Gaps = 0/351 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y ++ RL FL+ PE H LVFA LR +AA P R LL RL PTDP+L + VFGV FPA
Sbjct 2 LYQILLRLFFLVSPERVHTLVFAALRAIAAFTPTRWLLNRLCAPTDPILGTEVFGVHFPA 61
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKDG L WG +GFGYAE+GTVTA QPGNP PRLFRL DR LLNRMGFN
Sbjct 62 PLGLAAGFDKDGEGLKVWGPLGFGYAEVGTVTAIAQPGNPKPRLFRLPADRGLLNRMGFN 121
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA ALA RLA +PIG NIGK+K A +DYR SAR VGP A +LVVNVSSP
Sbjct 122 NHGAAALAPRLATRTSTVPIGANIGKSKIVEPAFASSDYRVSARQVGPAADFLVVNVSSP 181
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQA+ LR ILSAV ET+ PVLVKIAPDLSD+D+D+IADLAVEL LAGIVAT
Sbjct 182 NTPGLRDLQAIGELRKILSAVLEETTAPVLVKIAPDLSDADIDEIADLAVELGLAGIVAT 241
Query 241 NTTVSRDGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDA 300
NTT+SR L T GV+ LG GG+SGPP+A R+++VLRRLY RVGDRL LISVGGIE ADDA
Sbjct 242 NTTISRAALKTTGVEDLGAGGVSGPPVAARSLEVLRRLYRRVGDRLVLISVGGIEDADDA 301
Query 301 WERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSA 351
W RI AGASLLQGYTGFIY G +AK IH+GIA+RL GGF SL +AVGSA
Sbjct 302 WARIIAGASLLQGYTGFIYRGGFYAKRIHDGIAQRLRAGGFASLQDAVGSA 352
>gi|325676871|ref|ZP_08156544.1| dihydroorotate oxidase [Rhodococcus equi ATCC 33707]
gi|325552419|gb|EGD22108.1| dihydroorotate oxidase [Rhodococcus equi ATCC 33707]
Length=356
Score = 455 bits (1171), Expect = 4e-126, Method: Compositional matrix adjust.
Identities = 231/355 (66%), Positives = 278/355 (79%), Gaps = 2/355 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+ RL+F +PPE H L FA +R V AP+R L+ ++L DP L +T FGV FPA
Sbjct 1 MYYLLLRLMFRVPPERIHHLAFAAMRLVTRFAPIRALVAKVLVVDDPALRTTAFGVDFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
P+GLAAGFDKD T + +WG +GFG+AE+GTVTA QPGNPAPRLFRL DDRAL+NRMGFN
Sbjct 61 PVGLAAGFDKDATGVDTWGPLGFGFAEVGTVTAQAQPGNPAPRLFRLPDDRALVNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A L R ++PIG NIGKTK PA DA DY ASAR++GPLA +LVVNVSSP
Sbjct 121 NHGAGNAANHLRHRRGDVPIGANIGKTKIVPAEDAPGDYTASARLLGPLADFLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRP+L AV PVLVKIAPDLSD D+D +ADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPLLQAVLDTVHIPVLVKIAPDLSDEDVDTVADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SR GL TP ++ +G GG+SG P+A R+++VLRRL+ RVGD+L LISVGGIETAD
Sbjct 241 NTTISRTGLNTPQSRIEEIGAGGLSGAPVAARSLEVLRRLHGRVGDKLVLISVGGIETAD 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
AWERI AGA+L+QGYTGFIYGG +AK +H+G+AR++ + GF S+ +AVG+ R
Sbjct 301 QAWERILAGATLVQGYTGFIYGGPFYAKKLHKGLARKVREAGFRSIADAVGAGAR 355
>gi|312139680|ref|YP_004007016.1| dihydroorotate dehydrogenase pyrd [Rhodococcus equi 103S]
gi|311889019|emb|CBH48332.1| dihydroorotate dehydrogenase PyrD [Rhodococcus equi 103S]
Length=356
Score = 455 bits (1170), Expect = 5e-126, Method: Compositional matrix adjust.
Identities = 231/355 (66%), Positives = 278/355 (79%), Gaps = 2/355 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+ RL+F +PPE H L FA +R V AP+R L+ ++L DP L +T FGV FPA
Sbjct 1 MYYLLLRLMFRVPPERIHHLAFAAMRLVTRFAPIRALVAKVLVVDDPALRTTAFGVDFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
P+GLAAGFDKD T + +WG +GFG+AE+GTVTA QPGNPAPRLFRL DDRAL+NRMGFN
Sbjct 61 PVGLAAGFDKDATGVDTWGPLGFGFAEVGTVTAQAQPGNPAPRLFRLPDDRALVNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A L R ++PIG NIGKTK PA DA DY ASAR++GPLA +LVVNVSSP
Sbjct 121 NHGAGNAANHLRHRRGDVPIGANIGKTKIVPAEDAPGDYTASARLLGPLADFLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRP+L AV PVLVKIAPDLSD D+D +ADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPLLQAVLDTVHIPVLVKIAPDLSDEDVDAVADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SR GL TP ++ +G GG+SG P+A R+++VLRRL+ RVGD+L LISVGGIETAD
Sbjct 241 NTTISRTGLNTPQSRIEEIGAGGLSGAPVAARSLEVLRRLHGRVGDKLVLISVGGIETAD 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
AWERI AGA+L+QGYTGFIYGG +AK +H+G+AR++ + GF S+ +AVG+ R
Sbjct 301 QAWERILAGATLVQGYTGFIYGGPFYAKKLHKGLARKVREAGFRSIADAVGAGAR 355
>gi|226306698|ref|YP_002766658.1| dihydroorotate dehydrogenase [Rhodococcus erythropolis PR4]
gi|259547552|sp|C0ZZY4.1|PYRD_RHOE4 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|226185815|dbj|BAH33919.1| dihydroorotate dehydrogenase [Rhodococcus erythropolis PR4]
Length=356
Score = 450 bits (1157), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 229/356 (65%), Positives = 273/356 (77%), Gaps = 2/356 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+ L+F +PPE H + F ++ V AP+R L+ ++L DPVL S FG+ FPA
Sbjct 1 MYQLLLSLMFRVPPERIHHIAFTAMKLVTRFAPLRWLVAKVLVVDDPVLRSQAFGLTFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKD T + +WG +GFG+AE+GTVTA QPGNPAPRLFRL DRAL+NRMGFN
Sbjct 61 PLGLAAGFDKDATGVDAWGPLGFGFAEVGTVTAQAQPGNPAPRLFRLPADRALINRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A L + R +PIG NIGKTK A DA DY ASA+++GPLA ++VVNVSSP
Sbjct 121 NHGAGHAANFLRQRRVTVPIGANIGKTKIVEAVDAAADYTASAQLLGPLADFMVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL AV S PVLVKIAPDLSD D+D +ADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILQAVLDTVSVPVLVKIAPDLSDEDVDAVADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+ RDGL TP V LG GG+SG P+A R+++VLRRLY RVGD++ +ISVGGIETAD
Sbjct 241 NTTIRRDGLKTPDAEVAALGAGGLSGAPVADRSLEVLRRLYARVGDKMTIISVGGIETAD 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRR 354
AWERI AGA+L+QGYTGFIYGG WA+ IH+GIA+R+ GF S+ +AVG+ R
Sbjct 301 QAWERILAGATLVQGYTGFIYGGPFWARSIHKGIAKRVRAAGFSSIAQAVGAENPR 356
>gi|333919619|ref|YP_004493200.1| dihydroorotate dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481840|gb|AEF40400.1| Dihydroorotate dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
Length=361
Score = 437 bits (1125), Expect = 9e-121, Method: Compositional matrix adjust.
Identities = 223/355 (63%), Positives = 280/355 (79%), Gaps = 2/355 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY ++ R++FL+PPE H+ F +++ + + P+R L +LL DP+L +T FGV FPA
Sbjct 1 MYRILLRVMFLLPPEAIHRFAFGMIKTIGFLPPLRWLTGKLLSQHDPILRTTTFGVAFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ A+++WG +GFGYAEIGTVTAHPQPGNP+PRL+RL D AL+NRMGFN
Sbjct 61 PLGLAAGFDKNAAAINAWGPLGFGYAEIGTVTAHPQPGNPSPRLYRLPADHALINRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A +L R IP+G NIGKTK P +A NDY ASA+++GPL+ +LVVNVSSP
Sbjct 121 NHGAGFAANKLRTRRTSIPVGANIGKTKIVPPEEAANDYIASAQLLGPLSDFLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRP+L+A+ A + PVLVKIAPDLSD D+D IADLAVEL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPLLAAITAAVTVPVLVKIAPDLSDDDIDAIADLAVELGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT++R+GL TPG V +G GG+SG P+A R+++VLRRLY RVG ++AL+S GGIET D
Sbjct 241 NTTIARNGLNTPGEEVAEMGAGGLSGVPVADRSLEVLRRLYRRVGGKIALVSAGGIETVD 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
AW+RI AGA+LLQGYTG+IYGG W + I++GIA+RL G+ SL EAVG+ R
Sbjct 301 QAWQRIEAGATLLQGYTGYIYGGPLWPRRINKGIAQRLRAQGYSSLAEAVGAEHR 355
>gi|229494842|ref|ZP_04388595.1| dihydroorotate oxidase [Rhodococcus erythropolis SK121]
gi|229318200|gb|EEN84068.1| dihydroorotate oxidase [Rhodococcus erythropolis SK121]
Length=356
Score = 434 bits (1115), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 228/356 (65%), Positives = 274/356 (77%), Gaps = 2/356 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+ L+F +PPE H + F ++ V AP+R L+ ++L DPVL S FG+ FPA
Sbjct 1 MYQLLLSLMFRVPPERIHHIAFTAMKLVTRFAPLRWLVAKVLVVDDPVLRSQAFGLTFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKD T + +WG +GFG+AE+GTVTA QPGNPAPRLFRL DRAL+NRMGFN
Sbjct 61 PLGLAAGFDKDATGVDAWGPLGFGFAEVGTVTAQAQPGNPAPRLFRLPADRALINRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A L + R +PIG NIGKTK A DA DY ASA+++GPLA ++VVNVSSP
Sbjct 121 NHGAGHAANFLRQRRVTVPIGANIGKTKIVEAADAAADYTASAQLLGPLADFMVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL AV S PVLVKIAPDLSD D+D +ADLA+EL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILQAVLDTVSVPVLVKIAPDLSDEDVDAVADLAIELGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+ RDGL TP V LG GG+SG P+A+R+++VLRRLY RVGD++ +ISVGGIETAD
Sbjct 241 NTTIRRDGLKTPDAEVAALGAGGLSGAPVAERSLEVLRRLYARVGDKMTIISVGGIETAD 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRR 354
AWERI AGA+L+QGYTGFIYGG WA+ IH+GIA+R+ GF S+ +AVG+ R
Sbjct 301 QAWERILAGATLVQGYTGFIYGGPFWARSIHKGIAKRVRAAGFSSIAQAVGAENPR 356
>gi|326382263|ref|ZP_08203955.1| dihydroorotate dehydrogenase 2 [Gordonia neofelifaecis NRRL B-59395]
gi|326198993|gb|EGD56175.1| dihydroorotate dehydrogenase 2 [Gordonia neofelifaecis NRRL B-59395]
Length=366
Score = 432 bits (1111), Expect = 4e-119, Method: Compositional matrix adjust.
Identities = 221/356 (63%), Positives = 268/356 (76%), Gaps = 5/356 (1%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+YP+V + +FLI PE H + ++R +R L+ +L DP+L + VFGV FPA
Sbjct 9 LYPVVLKTMFLIQPERIHTITAWIIRRAGYAPGLRSLMAKLFATDDPILTNEVFGVDFPA 68
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
P+GLAAGFDK +++++WG MGFG+AEIGT+T QPGNPAPRLFRL DRAL+NRMGFN
Sbjct 69 PIGLAAGFDKTASSVNAWGQMGFGFAEIGTITGQAQPGNPAPRLFRLPADRALINRMGFN 128
Query 121 NHGARALAIRLARHRP---EIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNV 177
N GA A A++LA RP +PIG NIGKTK P DAV DYR SAR +GPLA ++VVNV
Sbjct 129 NPGADAAALKLAESRPGPVRVPIGANIGKTKVVPVEDAVTDYRHSARTLGPLADFVVVNV 188
Query 178 SSPNTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGI 237
SSPNTPGLRDLQAV+SLRPIL+ V PVLVKIAPDLSD D+D +ADLAVEL LAGI
Sbjct 189 SSPNTPGLRDLQAVDSLRPILATVLEVVDKPVLVKIAPDLSDEDVDAVADLAVELGLAGI 248
Query 238 VATNTTVSRDGLTTP--GVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIE 295
VATNTT+ RDGL TP V+ G GG+SGP +A R+++VL+RLY RVG R+ALISVGGIE
Sbjct 249 VATNTTIRRDGLRTPRAEVEACGAGGLSGPAVADRSLEVLKRLYGRVGGRVALISVGGIE 308
Query 296 TADDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSA 351
T D AWERI AGA LLQ YTGFIYGG +++H+G+A RL GF S+ +AVGSA
Sbjct 309 TVDQAWERICAGADLLQMYTGFIYGGPVRLRELHDGLAARLRTEGFTSIKDAVGSA 364
>gi|226360040|ref|YP_002777818.1| dihydroorotate dehydrogenase 2 [Rhodococcus opacus B4]
gi|254788898|sp|C1ASU1.1|PYRD_RHOOB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|226238525|dbj|BAH48873.1| dihydroorotate dehydrogenase [Rhodococcus opacus B4]
Length=356
Score = 431 bits (1108), Expect = 9e-119, Method: Compositional matrix adjust.
Identities = 230/356 (65%), Positives = 279/356 (79%), Gaps = 2/356 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L+ R++F +PPE H L FA +R V +P+R+L+ R+L DPVL +TVFG+ FPA
Sbjct 1 MYHLLLRVMFRLPPERIHHLAFAAMRLVTRFSPLRQLVGRVLVVDDPVLRNTVFGLDFPA 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDKD T + +WG +GFG+AE+GTVTA QPGNPAPRLFRL DRAL+NRMGFN
Sbjct 61 PLGLAAGFDKDATGVDAWGPLGFGFAEVGTVTAQAQPGNPAPRLFRLPADRALINRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A L + R +PIG NIGKTK A DA DY ASA ++GPLA ++VVNVSSP
Sbjct 121 NHGAGNAANHLRQRRAGVPIGANIGKTKIVDAADAPADYTASAHLLGPLADFMVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRP+L AV + PVLVKIAPDLSD D+D +ADLA+EL LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPLLRAVLDSVTVPVLVKIAPDLSDDDVDAVADLALELGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+ RDGL TP V +G GG+SGPP+A+R+++VLRRL+ RVGDRL LISVGGIET D
Sbjct 241 NTTIRRDGLNTPDDEVTAIGAGGLSGPPVAERSLEVLRRLHARVGDRLVLISVGGIETVD 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRR 354
AWERI AGASL+QGYTGFIYGG WA+ IH+G+AR++ + G+ S+ +AVG+ R
Sbjct 301 QAWERILAGASLVQGYTGFIYGGPFWARRIHKGLARKVREAGYSSVADAVGAGAVR 356
>gi|259507257|ref|ZP_05750157.1| dihydroorotate oxidase [Corynebacterium efficiens YS-314]
gi|30173310|sp|Q8FTC6.2|PYRD_COREF RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate
oxidase
gi|259165200|gb|EEW49754.1| dihydroorotate oxidase [Corynebacterium efficiens YS-314]
Length=377
Score = 430 bits (1106), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 222/352 (64%), Positives = 265/352 (76%), Gaps = 2/352 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y + +F + PE H ++ L + PV R + R++G DPVL+ VFGV FP
Sbjct 17 VYDASLKAMFTLRPERIHGIIADGLGVLQMATPVNRAMGRVIGVNDPVLSQEVFGVTFPR 76
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ TA +W A+GFGYAE+GTVTA PQ GNP PRLFRL DRA+LNRMGFN
Sbjct 77 PLGLAAGFDKNATAADTWTALGFGYAELGTVTASPQAGNPTPRLFRLPADRAILNRMGFN 136
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA +A L R + IG+NIGKTK PA AV+DYR SA ++G LA YLVVNVSSP
Sbjct 137 NAGAADVADNLRRRKSRDVIGINIGKTKVVPAEQAVDDYRRSASLLGDLADYLVVNVSSP 196
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AV+ TS PVLVKIAPDLSD D+D +ADLAVEL LAGIVAT
Sbjct 197 NTPGLRDLQAVESLRPILAAVQESTSVPVLVKIAPDLSDEDVDAVADLAVELGLAGIVAT 256
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SR+GL TP V +G GGISGPP+A+RA++VLRRL+ RVGD+L LI VGGI T +
Sbjct 257 NTTISREGLVTPAHEVAEMGAGGISGPPVAERALEVLRRLHARVGDQLVLIGVGGISTPE 316
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AWERI AGA+LLQGYTGFIYGG W +DIH G+A ++ G ++ EAVGS
Sbjct 317 QAWERIAAGATLLQGYTGFIYGGPDWIRDIHLGLAEQVKAHGLSNISEAVGS 368
>gi|32479376|ref|NP_862229.1| dihydroorotate dehydrogenase 2 [Corynebacterium striatum]
gi|172039958|ref|YP_001799672.1| dihydroorotate dehydrogenase 2 [Corynebacterium urealyticum DSM
7109]
gi|227487327|ref|ZP_03917643.1| dihydroorotate dehydrogenase 2 [Corynebacterium glucuronolyticum
ATCC 51867]
6 more sequence titles
Length=359
Score = 430 bits (1105), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 216/352 (62%), Positives = 266/352 (76%), Gaps = 4/352 (1%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y +L+FL+PPE H ++ L+ + PV R++ + + DPVL TVFGV FPA
Sbjct 3 LYDRALKLMFLLPPERIHGIISGALQTLHLATPVNRVMEKAVRVHDPVLRQTVFGVDFPA 62
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ A+ SWGA+GFGYAE+GTVT QPGNP PRLFRL +D+A+LNRMGFN
Sbjct 63 PLGLAAGFDKNAEAIDSWGAIGFGYAEMGTVTPKSQPGNPTPRLFRLPEDKAILNRMGFN 122
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA +A L R +G+NIGK K + DAV DYRA++ ++G LA YLVVNVSSP
Sbjct 123 NKGALVVADNLRARRSRDVVGINIGKNKTSE--DAVADYRATSTLLGQLADYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVE LRPIL V+ T+TPVLVKIAPDLSD D+D +ADLAVEL+LAGIVAT
Sbjct 181 NTPGLRDLQAVEELRPILEVVKKSTTTPVLVKIAPDLSDEDIDAVADLAVELELAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SR GL TP V+++G GGISG PL R+++VL+RL++RVGD+L L+SVGGI T +
Sbjct 241 NTTISRSGLKTPASKVEKMGAGGISGAPLENRSLEVLKRLHERVGDKLVLVSVGGISTPE 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AWERITAGASLLQGYT FIYGG W + IH GIA ++ G S+ +AVGS
Sbjct 301 QAWERITAGASLLQGYTPFIYGGLGWIRGIHRGIAAQIKAHGLDSIEQAVGS 352
>gi|319949260|ref|ZP_08023340.1| dihydroorotate dehydrogenase 2 [Dietzia cinnamea P4]
gi|319437050|gb|EFV92090.1| dihydroorotate dehydrogenase 2 [Dietzia cinnamea P4]
Length=355
Score = 430 bits (1105), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 224/355 (64%), Positives = 268/355 (76%), Gaps = 2/355 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
MY L++++LF P E H LVF +L+ + V P+ ++RR+LG DPVLA V G FP
Sbjct 1 MYALLKKVLFRFPAERIHHLVFGLLKLLTLVPPLGAVVRRVLGVRDPVLAQEVLGRTFPG 60
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ A+ SWGA+GFG++E+GTVTA PQPGNPAPRLFRL +DRA+LNRMGFN
Sbjct 61 PLGLAAGFDKNAAAVDSWGAIGFGFSEVGTVTASPQPGNPAPRLFRLVEDRAILNRMGFN 120
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
NHGA A L R R P+G+NIGKTK PA DAV DY ASA M+ LA YLVVNVSSP
Sbjct 121 NHGAGNAANNLRRRRSSDPVGINIGKTKVVPAEDAVRDYVASATMLTGLADYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AVR + PVLVKIAPDL D+D+D + DL ++L LAGIVAT
Sbjct 181 NTPGLRDLQAVESLRPILAAVRDVATIPVLVKIAPDLDDADIDAVTDLVLDLGLAGIVAT 240
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SRDGL TP V+ LG GGISG P+A R+ +VL R++ R G RL +ISVGGIET +
Sbjct 241 NTTISRDGLRTPAAHVEALGAGGISGAPVAARSREVLARIHARAGGRLVIISVGGIETPE 300
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARR 353
D W+RIT GA L+Q YTGFI+ G + + +ARRL GGFGSL EAVGSA R
Sbjct 301 DVWDRITHGAHLVQTYTGFIFTGPSLVRGTNRLVARRLRQGGFGSLAEAVGSAVR 355
>gi|311739447|ref|ZP_07713282.1| dihydroorotate oxidase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305263|gb|EFQ81331.1| dihydroorotate oxidase [Corynebacterium pseudogenitalium ATCC
33035]
Length=371
Score = 429 bits (1104), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 221/357 (62%), Positives = 266/357 (75%), Gaps = 2/357 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y L R +F + PE H+++ L G+ A P R L ++L DPVL VFGV FP P
Sbjct 13 YQLALRGMFKLSPERIHEIINTALSGLQAAGPANRALAKILPVNDPVLRQEVFGVEFPRP 72
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDK+ A +W +GFGYAE+GTVTA QPGNPAPRLFRL D+A+LNRMGFNN
Sbjct 73 LGLAAGFDKNAAAADTWTPIGFGYAELGTVTAQAQPGNPAPRLFRLKADKAILNRMGFNN 132
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA A A L + R IG+NIGKTK TPA AV DYR SA ++G LA +LVVNVSSPN
Sbjct 133 KGAAAAAENLRKRRYSDVIGINIGKTKVTPAEHAVEDYRRSASVLGDLADFLVVNVSSPN 192
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAVESLRPILSAV+ T+ PVLVKIAPDLSD+D+D +ADLA+EL L GIVATN
Sbjct 193 TPGLRDLQAVESLRPILSAVQECTAVPVLVKIAPDLSDADVDAVADLALELGLDGIVATN 252
Query 242 TTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADD 299
TT+SR+GL TP V +G GG+SGPP+A+R+++VLRRL +RVG +L LISVGGI T +
Sbjct 253 TTISREGLKTPAAEVKDMGAGGVSGPPVAERSLEVLRRLNERVGGQLTLISVGGISTPEQ 312
Query 300 AWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQP 356
AWERIT+GASLLQGYTG IYGG W +DIH GIA ++ G ++ +AVGS +P
Sbjct 313 AWERITSGASLLQGYTGLIYGGPDWIRDIHRGIAAQIRAHGLSNISQAVGSGLPWKP 369
>gi|227503621|ref|ZP_03933670.1| dihydroorotate dehydrogenase 2 [Corynebacterium accolens ATCC
49725]
gi|227075657|gb|EEI13620.1| dihydroorotate dehydrogenase 2 [Corynebacterium accolens ATCC
49725]
Length=371
Score = 429 bits (1103), Expect = 4e-118, Method: Compositional matrix adjust.
Identities = 222/351 (64%), Positives = 264/351 (76%), Gaps = 2/351 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y L R +F I PE H ++ + L G+ A P R L R+L DPVL V G+ FP P
Sbjct 13 YQLALRGMFRISPERIHGIINSGLHGLHAAGPANRALGRILPVNDPVLTQEVCGITFPRP 72
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDK+ A +W +GFGYAE+GTVTA QPGNP PRLFRL +D A+LNRMGFNN
Sbjct 73 LGLAAGFDKNAAAADAWSPLGFGYAELGTVTAQAQPGNPTPRLFRLKEDAAILNRMGFNN 132
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA A+A L + R IG+NIGKTK TPA AV+DYR SA ++G LA YLVVNVSSPN
Sbjct 133 EGAAAVAENLRKRRYNDVIGINIGKTKVTPAERAVDDYRRSASVLGGLADYLVVNVSSPN 192
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAVESLRPIL AV+ T PV+VKIAPDLSD+D+D +ADLAVEL LAGIVATN
Sbjct 193 TPGLRDLQAVESLRPILRAVQESTDVPVMVKIAPDLSDADVDAVADLAVELGLAGIVATN 252
Query 242 TTVSRDGLTTP--GVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADD 299
TT+SR+GL+TP V+ LG GGISGPP+A+R+++VLRRL RVG +L LISVGGI T +
Sbjct 253 TTISREGLSTPRAEVEALGAGGISGPPVAERSLEVLRRLNARVGSQLVLISVGGISTPEQ 312
Query 300 AWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AWERI+AGA LLQGYTG IYGG W +DIH GIA+++ G ++ EAVGS
Sbjct 313 AWERISAGACLLQGYTGLIYGGPDWIRDIHRGIAQQIRAHGLSNISEAVGS 363
>gi|25028199|ref|NP_738253.1| dihydroorotate dehydrogenase 2 [Corynebacterium efficiens YS-314]
gi|23493483|dbj|BAC18453.1| dihydroorotate dehydrogenase [Corynebacterium efficiens YS-314]
Length=423
Score = 428 bits (1101), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 222/352 (64%), Positives = 265/352 (76%), Gaps = 2/352 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y + +F + PE H ++ L + PV R + R++G DPVL+ VFGV FP
Sbjct 63 VYDASLKAMFTLRPERIHGIIADGLGVLQMATPVNRAMGRVIGVNDPVLSQEVFGVTFPR 122
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ TA +W A+GFGYAE+GTVTA PQ GNP PRLFRL DRA+LNRMGFN
Sbjct 123 PLGLAAGFDKNATAADTWTALGFGYAELGTVTASPQAGNPTPRLFRLPADRAILNRMGFN 182
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA +A L R + IG+NIGKTK PA AV+DYR SA ++G LA YLVVNVSSP
Sbjct 183 NAGAADVADNLRRRKSRDVIGINIGKTKVVPAEQAVDDYRRSASLLGDLADYLVVNVSSP 242
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AV+ TS PVLVKIAPDLSD D+D +ADLAVEL LAGIVAT
Sbjct 243 NTPGLRDLQAVESLRPILAAVQESTSVPVLVKIAPDLSDEDVDAVADLAVELGLAGIVAT 302
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SR+GL TP V +G GGISGPP+A+RA++VLRRL+ RVGD+L LI VGGI T +
Sbjct 303 NTTISREGLVTPAHEVAEMGAGGISGPPVAERALEVLRRLHARVGDQLVLIGVGGISTPE 362
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AWERI AGA+LLQGYTGFIYGG W +DIH G+A ++ G ++ EAVGS
Sbjct 363 QAWERIAAGATLLQGYTGFIYGGPDWIRDIHLGLAEQVKAHGLSNISEAVGS 414
>gi|306836115|ref|ZP_07469101.1| dihydroorotate oxidase [Corynebacterium accolens ATCC 49726]
gi|304567965|gb|EFM43544.1| dihydroorotate oxidase [Corynebacterium accolens ATCC 49726]
Length=371
Score = 428 bits (1101), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 222/351 (64%), Positives = 264/351 (76%), Gaps = 2/351 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y L R +F + PE H ++ + L G+ A P R L R+L DPVL V G+ FP P
Sbjct 13 YQLALRGMFRLSPERIHGIINSGLHGLHAAGPANRALGRILPVNDPVLTQEVCGITFPRP 72
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDK+ A +W +GFGYAE+GTVTA QPGNP PRLFRL +D A+LNRMGFNN
Sbjct 73 LGLAAGFDKNAAAADAWSPLGFGYAELGTVTAQAQPGNPTPRLFRLKEDAAILNRMGFNN 132
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA A+A L + R IG+NIGKTK TPA AV+DYR SA ++G LA YLVVNVSSPN
Sbjct 133 EGAAAVAENLRKRRYNDVIGINIGKTKVTPAERAVDDYRRSASVLGGLADYLVVNVSSPN 192
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAVESLRPIL AV+ T PV+VKIAPDLSD+D+D +ADLAVEL LAGIVATN
Sbjct 193 TPGLRDLQAVESLRPILRAVQESTDVPVMVKIAPDLSDADVDAVADLAVELGLAGIVATN 252
Query 242 TTVSRDGLTTP--GVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADD 299
TT+SR+GL+TP V+ LG GGISGPP+A+R+++VLRRL RVG +L LISVGGI T +
Sbjct 253 TTISREGLSTPRAEVEALGAGGISGPPVAERSLEVLRRLNARVGSQLVLISVGGITTPEQ 312
Query 300 AWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AWERI AGASLLQGYTG IYGG W +DIH GIA+++ G ++ EAVGS
Sbjct 313 AWERIAAGASLLQGYTGLIYGGPDWIRDIHRGIAKQIRAHGLSNISEAVGS 363
>gi|255325706|ref|ZP_05366803.1| dihydroorotate oxidase [Corynebacterium tuberculostearicum SK141]
gi|255297316|gb|EET76636.1| dihydroorotate oxidase [Corynebacterium tuberculostearicum SK141]
Length=371
Score = 427 bits (1099), Expect = 9e-118, Method: Compositional matrix adjust.
Identities = 220/357 (62%), Positives = 266/357 (75%), Gaps = 2/357 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y L R +F + PE H+++ L G+ A P R L ++L DPVL VFGV FP P
Sbjct 13 YQLALRGMFKLSPERIHEIINTALSGLQAAGPANRALAKILPVNDPVLRQEVFGVEFPRP 72
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDK+ A +W +GFGYAE+GTVTA QPGNPAPRLFRL D+A+LNRMGFNN
Sbjct 73 LGLAAGFDKNAAAADTWTPIGFGYAELGTVTAQAQPGNPAPRLFRLKADKAILNRMGFNN 132
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA A A L + R IG+NIGKTK TPA AV DYR SA ++G LA +LVVNVSSPN
Sbjct 133 KGAAAAAENLRKRRYSDVIGINIGKTKVTPAEHAVEDYRRSASVLGDLADFLVVNVSSPN 192
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAVESLRPILSAV+ T+ PVLVKIAPDLSD+D+D +ADLA+EL L GIVATN
Sbjct 193 TPGLRDLQAVESLRPILSAVQECTAVPVLVKIAPDLSDADVDAVADLALELGLDGIVATN 252
Query 242 TTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADD 299
TT+SR+GL TP V +G GG+SGPP+A+R+++VLRRL +RVG +L LISVGGI T +
Sbjct 253 TTISREGLKTPAAEVKDMGAGGVSGPPVAERSLEVLRRLNERVGGQLTLISVGGISTPEQ 312
Query 300 AWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQP 356
AWERIT+GASLLQGYTG IYGG W ++IH GIA ++ G ++ +AVGS +P
Sbjct 313 AWERITSGASLLQGYTGLIYGGPDWIRNIHRGIAAQIRAHGLSNISQAVGSGLPWKP 369
>gi|296139837|ref|YP_003647080.1| dihydroorotate dehydrogenase [Tsukamurella paurometabola DSM
20162]
gi|296027971|gb|ADG78741.1| dihydroorotate dehydrogenase [Tsukamurella paurometabola DSM
20162]
Length=360
Score = 426 bits (1094), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 220/357 (62%), Positives = 266/357 (75%), Gaps = 5/357 (1%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y ++ R +FLI PE H LVF ++RG AV PVR LRR + DPVL TVFGV FP+
Sbjct 4 LYQVLLRTMFLISPERIHHLVFGLIRGTTAVPPVRTGLRRAIAFRDPVLTQTVFGVEFPS 63
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
P+GLAAGFDK+ A++ WG +GFG+AEIGTVTAH QPGNPAPRLFRL D AL+NRMGFN
Sbjct 64 PVGLAAGFDKNARAVNGWGPLGFGFAEIGTVTAHAQPGNPAPRLFRLPRDHALINRMGFN 123
Query 121 NHGARALAIRLARHR---PEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNV 177
N+G+ A A L + +PIG NIGKTK TP A +DYR SA ++GPLA ++VVNV
Sbjct 124 NYGSGAAANELRKRDAGPSAVPIGANIGKTKATPLDGAADDYRVSAMLLGPLADFIVVNV 183
Query 178 SSPNTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGI 237
SSPNTPGLRDLQA ESLRP+L AV S PVLVKIAPDL+D D+D +ADLA+EL LAGI
Sbjct 184 SSPNTPGLRDLQATESLRPVLQAVLDTVSVPVLVKIAPDLADEDVDAVADLALELGLAGI 243
Query 238 VATNTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIE 295
VATNTT+SR+GL TP V+ +G GG+SG P+ R+++VLRRL RVGDRL LISVGGIE
Sbjct 244 VATNTTISREGLRTPAAEVEAIGAGGLSGHPVKARSLEVLRRLSARVGDRLVLISVGGIE 303
Query 296 TADDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSAR 352
DD ++RI AGASL+Q YT FIYGG W + + + +A RL GF S+ EAVG R
Sbjct 304 DVDDVYQRIRAGASLVQVYTQFIYGGPLWVRTVQKQLAERLRADGFASISEAVGVDR 360
>gi|227504347|ref|ZP_03934396.1| dihydroorotate dehydrogenase 2 [Corynebacterium striatum ATCC
6940]
gi|227198995|gb|EEI79043.1| dihydroorotate dehydrogenase 2 [Corynebacterium striatum ATCC
6940]
Length=370
Score = 425 bits (1093), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 216/351 (62%), Positives = 267/351 (77%), Gaps = 2/351 (0%)
Query 2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAP 61
Y L + +F + PE H ++ L G+ + R L +++ DPVL+ VFGV FP P
Sbjct 14 YQLALKGMFKLSPERIHLIMIGALSGLQKAPFLHRGLHKIVPVNDPVLSQEVFGVTFPRP 73
Query 62 LGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNN 121
LGLAAGFDK+ TA +W +GFGYAE+GTVTA QPGNP+PRLFRL DR +LNRMGFNN
Sbjct 74 LGLAAGFDKNATAADTWSGVGFGYAELGTVTAKAQPGNPSPRLFRLKADRGILNRMGFNN 133
Query 122 HGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPN 181
GA A A L + IG+NIGKTK TPA +AV DYR SA ++G LA YLVVNVSSPN
Sbjct 134 EGAAAAARHLRARKTSDVIGINIGKTKVTPAEEAVADYRQSASVLGDLADYLVVNVSSPN 193
Query 182 TPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATN 241
TPGLRDLQAVESLRPI++AV+ TS+PVLVKIAPDLSD D+D +AD+AV+L LAGIVATN
Sbjct 194 TPGLRDLQAVESLRPIMAAVQESTSSPVLVKIAPDLSDEDVDAVADMAVDLGLAGIVATN 253
Query 242 TTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADD 299
TT+SR+GL TP V +G GG+SGPP+A R+++VL+RL++RVGD+L L+SVGGIET +
Sbjct 254 TTISREGLKTPADEVAAMGAGGVSGPPVAARSLEVLKRLHERVGDKLVLVSVGGIETPEQ 313
Query 300 AWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AW+RI AGASLLQGYTG IYGG W +DIH GIA+++H G ++ EAVGS
Sbjct 314 AWQRIAAGASLLQGYTGLIYGGPDWIRDIHRGIAQQIHAHGLCNISEAVGS 364
>gi|68535430|ref|YP_250135.1| dihydroorotate dehydrogenase 2 [Corynebacterium jeikeium K411]
gi|260578236|ref|ZP_05846153.1| dihydroorotate oxidase [Corynebacterium jeikeium ATCC 43734]
gi|311740647|ref|ZP_07714474.1| dihydroorotate oxidase [Corynebacterium pseudogenitalium ATCC
33035]
gi|68263029|emb|CAI36517.1| pyrD2 [Corynebacterium jeikeium K411]
gi|258603636|gb|EEW16896.1| dihydroorotate oxidase [Corynebacterium jeikeium ATCC 43734]
gi|311304167|gb|EFQ80243.1| dihydroorotate oxidase [Corynebacterium pseudogenitalium ATCC
33035]
Length=360
Score = 425 bits (1093), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 217/353 (62%), Positives = 267/353 (76%), Gaps = 5/353 (1%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y +L+FL+PPE H ++ L+ + V PV R++ + + DPVL TVFGV FPA
Sbjct 3 LYDRALKLMFLLPPERIHGIISGALQTLHLVTPVNRVMEKAVRVHDPVLHQTVFGVDFPA 62
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ A+ SWGA+GFGYAE+GTVT QPGNP PRLFRL +D+A+LNRMGFN
Sbjct 63 PLGLAAGFDKNAEAIDSWGAIGFGYAEMGTVTPKSQPGNPTPRLFRLPEDKAILNRMGFN 122
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA +A L R +G+NIGK K + DAV DYRA++ ++G LA YLVVNVSSP
Sbjct 123 NKGALVVADNLRARRSRDVVGINIGKNKTSE--DAVADYRATSTLLGQLADYLVVNVSSP 180
Query 181 NTPGLRDLQAVESLRPILSAV-RAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVA 239
NTPGLRDLQAVE LRPIL V ++ T+TPVLVKIAPDLSD D+D +ADLAVEL LAGIVA
Sbjct 181 NTPGLRDLQAVEELRPILEVVKKSTTTTPVLVKIAPDLSDDDIDAVADLAVELGLAGIVA 240
Query 240 TNTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETA 297
TNTT+SRDGL TP V+++G GGISG PL +R+++VL+RL +RVGD+L L+SVGGI T
Sbjct 241 TNTTISRDGLKTPAAKVEKMGAGGISGAPLEKRSLEVLKRLNERVGDKLVLVSVGGISTP 300
Query 298 DDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
+ AWERI AGASLLQGYT FIYGG W + IH GIA ++ G S+ +AVGS
Sbjct 301 EQAWERIAAGASLLQGYTPFIYGGLGWIRGIHRGIAAQIKAHGLDSIEQAVGS 353
>gi|344045025|gb|EGV40699.1| dihydroorotate dehydrogenase 2 [Corynebacterium glutamicum S9114]
Length=371
Score = 425 bits (1093), Expect = 6e-117, Method: Compositional matrix adjust.
Identities = 216/352 (62%), Positives = 265/352 (76%), Gaps = 2/352 (0%)
Query 1 MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPA 60
+Y +++F + PE H L+ L V VAP+ R + +++ D L+ VFGV FP
Sbjct 14 VYDASLKVMFTLRPERIHGLMNKALGVVDGVAPLNRTMEKIIAVHDDSLSQEVFGVTFPR 73
Query 61 PLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFN 120
PLGLAAGFDK+ + +WGA+GFGYAE+GTVTA PQPGNP PRLFRL D+A+LNRMGFN
Sbjct 74 PLGLAAGFDKNASMADAWGAVGFGYAELGTVTASPQPGNPTPRLFRLPADKAILNRMGFN 133
Query 121 NHGARALAIRLARHRPEIPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSP 180
N GA +A L+ + IG+NIGKTK PA AV+DYR SA ++G LA YLVVNVSSP
Sbjct 134 NLGAAEVAKNLSNRKSTDVIGINIGKTKVVPAEHAVDDYRRSASLLGDLADYLVVNVSSP 193
Query 181 NTPGLRDLQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVAT 240
NTPGLRDLQAVESLRPIL+AV+ T+ PVLVKIAPDLSD D+D +ADLAVEL LAGIVAT
Sbjct 194 NTPGLRDLQAVESLRPILAAVQESTTVPVLVKIAPDLSDEDIDAVADLAVELKLAGIVAT 253
Query 241 NTTVSRDGLTTPG--VDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETAD 298
NTT+SR+GL TP V+ +G GGISG P+A R+++VL+RLY RVG + LISVGGI T +
Sbjct 254 NTTISREGLNTPAGEVEAMGAGGISGAPVAARSLEVLKRLYPRVGKEMVLISVGGISTPE 313
Query 299 DAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGS 350
AWERIT+GA+LLQGYT FIYGG W +DIH GIA++L G ++ EAVGS
Sbjct 314 QAWERITSGATLLQGYTPFIYGGPDWIRDIHLGIAKQLKAHGLRNITEAVGS 365
Lambda K H
0.321 0.139 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 670036296356
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40