BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2148c
Length=258
Score E
Sequences producing significant alignments: (Bits) Value
gi|253798787|ref|YP_003031788.1| hypothetical protein TBMG_01833... 518 3e-145
gi|326903765|gb|EGE50698.1| hypothetical protein TBPG_01647 [Myc... 518 3e-145
gi|15841640|ref|NP_336677.1| hypothetical protein MT2207 [Mycoba... 518 4e-145
gi|339295064|gb|AEJ47175.1| hypothetical protein CCDC5079_1985 [... 517 5e-145
gi|15609285|ref|NP_216664.1| hypothetical protein Rv2148c [Mycob... 517 5e-145
gi|289750744|ref|ZP_06510122.1| conserved hypothetical protein [... 517 8e-145
gi|340627156|ref|YP_004745608.1| hypothetical protein MCAN_21721... 515 2e-144
gi|240168212|ref|ZP_04746871.1| hypothetical protein MkanA1_0279... 410 9e-113
gi|183983178|ref|YP_001851469.1| hypothetical protein MMAR_3188 ... 375 4e-102
gi|118618790|ref|YP_907122.1| hypothetical protein MUL_3496 [Myc... 374 7e-102
gi|294993534|ref|ZP_06799225.1| hypothetical protein Mtub2_03254... 369 2e-100
gi|342859864|ref|ZP_08716517.1| hypothetical protein MCOL_13333 ... 353 2e-95
gi|254821929|ref|ZP_05226930.1| hypothetical protein MintA_18497... 352 3e-95
gi|15827439|ref|NP_301702.1| DNA-binding protein [Mycobacterium ... 352 3e-95
gi|15214403|sp|Q9CCE2.2|Y919_MYCLE RecName: Full=UPF0001 protein... 352 4e-95
gi|296166015|ref|ZP_06848467.1| alanine racemase domain protein ... 348 4e-94
gi|41407990|ref|NP_960826.1| hypothetical protein MAP1892c [Myco... 342 3e-92
gi|254775015|ref|ZP_05216531.1| hypothetical protein MaviaA2_101... 342 3e-92
gi|336461938|gb|EGO40790.1| pyridoxal phosphate enzyme, YggS fam... 342 4e-92
gi|118466416|ref|YP_881546.1| hypothetical protein MAV_2342 [Myc... 341 7e-92
gi|120404490|ref|YP_954319.1| alanine racemase domain-containing... 282 3e-74
gi|145223580|ref|YP_001134258.1| alanine racemase domain-contain... 278 6e-73
gi|169629098|ref|YP_001702747.1| hypothetical protein MAB_2011 [... 278 7e-73
gi|118470091|ref|YP_888497.1| hypothetical protein MSMEG_4220 [M... 276 2e-72
gi|315443927|ref|YP_004076806.1| pyridoxal phosphate enzyme, Ygg... 262 3e-68
gi|108800217|ref|YP_640414.1| hypothetical protein Mmcs_3251 [My... 261 7e-68
gi|126435840|ref|YP_001071531.1| alanine racemase domain-contain... 260 2e-67
gi|54023739|ref|YP_117981.1| hypothetical protein nfa17710 [Noca... 253 1e-65
gi|111018096|ref|YP_701068.1| hypothetical protein RHA1_ro01083 ... 252 5e-65
gi|333919003|ref|YP_004492584.1| hypothetical protein AS9A_1332 ... 248 8e-64
gi|229490375|ref|ZP_04384216.1| pyridoxal phosphate enzyme, YggS... 236 3e-60
gi|226360225|ref|YP_002778003.1| hypothetical protein ROP_08110 ... 234 7e-60
gi|226307034|ref|YP_002766994.1| hypothetical protein RER_35470 ... 234 1e-59
gi|312140137|ref|YP_004007473.1| alanine racemase [Rhodococcus e... 232 4e-59
gi|325674381|ref|ZP_08154069.1| alanine racemase domain protein ... 232 5e-59
gi|317508842|ref|ZP_07966483.1| alanine racemase domain-containi... 224 1e-56
gi|296140337|ref|YP_003647580.1| alanine racemase domain-contain... 204 1e-50
gi|257056711|ref|YP_003134543.1| pyridoxal phosphate enzyme, Ygg... 199 3e-49
gi|330469286|ref|YP_004407029.1| alanine racemase domain-contain... 196 2e-48
gi|159038975|ref|YP_001538228.1| alanine racemase domain-contain... 192 3e-47
gi|227488535|ref|ZP_03918851.1| alanine racemase [Corynebacteriu... 192 5e-47
gi|227543139|ref|ZP_03973188.1| alanine racemase [Corynebacteriu... 191 1e-46
gi|134102281|ref|YP_001107942.1| pyridoxal-5'-phosphate dependen... 188 8e-46
gi|296394950|ref|YP_003659834.1| alanine racemase [Segniliparus ... 187 1e-45
gi|255325339|ref|ZP_05366445.1| pyridoxal phosphate enzyme, YggS... 187 1e-45
gi|311741534|ref|ZP_07715358.1| YggS family pyridoxal phosphate ... 186 3e-45
gi|256379757|ref|YP_003103417.1| alanine racemase domain-contain... 184 9e-45
gi|163841224|ref|YP_001625629.1| putative cytoplasmic protein [R... 182 6e-44
gi|227504698|ref|ZP_03934747.1| alanine racemase [Corynebacteriu... 181 7e-44
gi|331696625|ref|YP_004332864.1| hypothetical protein Psed_2811 ... 179 3e-43
>gi|253798787|ref|YP_003031788.1| hypothetical protein TBMG_01833 [Mycobacterium tuberculosis KZN
1435]
gi|254364953|ref|ZP_04980999.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254551185|ref|ZP_05141632.1| hypothetical protein Mtube_12086 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
31 more sequence titles
Length=261
Score = 518 bits (1334), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 4 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 63
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 64 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 123
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 124 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 183
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 184 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 243
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 244 TCVRVGTALLGPRRLRSP 261
>gi|326903765|gb|EGE50698.1| hypothetical protein TBPG_01647 [Mycobacterium tuberculosis W-148]
gi|339298686|gb|AEJ50796.1| hypothetical protein CCDC5180_1959 [Mycobacterium tuberculosis
CCDC5180]
Length=262
Score = 518 bits (1334), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 4 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 63
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 64 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 123
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 124 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 183
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 184 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 243
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 244 TCVRVGTALLGPRRLRSP 261
>gi|15841640|ref|NP_336677.1| hypothetical protein MT2207 [Mycobacterium tuberculosis CDC1551]
gi|254232307|ref|ZP_04925634.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|13881892|gb|AAK46491.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|124601366|gb|EAY60376.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=264
Score = 518 bits (1333), Expect = 4e-145, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 7 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 66
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 67 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 126
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 127 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 186
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 187 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 246
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 247 TCVRVGTALLGPRRLRSP 264
>gi|339295064|gb|AEJ47175.1| hypothetical protein CCDC5079_1985 [Mycobacterium tuberculosis
CCDC5079]
Length=265
Score = 517 bits (1332), Expect = 5e-145, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 7 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 66
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 67 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 126
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 127 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 186
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 187 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 246
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 247 TCVRVGTALLGPRRLRSP 264
>gi|15609285|ref|NP_216664.1| hypothetical protein Rv2148c [Mycobacterium tuberculosis H37Rv]
gi|31793328|ref|NP_855821.1| hypothetical protein Mb2172c [Mycobacterium bovis AF2122/97]
gi|121638030|ref|YP_978254.1| hypothetical protein BCG_2165c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
36 more sequence titles
Length=258
Score = 517 bits (1332), Expect = 5e-145, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 241 TCVRVGTALLGPRRLRSP 258
>gi|289750744|ref|ZP_06510122.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289691331|gb|EFD58760.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=258
Score = 517 bits (1331), Expect = 8e-145, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDR+CAQVQ
Sbjct 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRVCAQVQ 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 241 TCVRVGTALLGPRRLRSP 258
>gi|340627156|ref|YP_004745608.1| hypothetical protein MCAN_21721 [Mycobacterium canettii CIPT
140010059]
gi|340005346|emb|CCC44504.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=258
Score = 515 bits (1326), Expect = 2e-144, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 257/258 (99%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLV ALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 121 VDSSRLVAALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS
Sbjct 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 241 TCVRVGTALLGPRRLRSP 258
>gi|240168212|ref|ZP_04746871.1| hypothetical protein MkanA1_02797 [Mycobacterium kansasii ATCC
12478]
Length=258
Score = 410 bits (1054), Expect = 9e-113, Method: Compositional matrix adjust.
Identities = 216/258 (84%), Positives = 223/258 (87%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
M DLSA DR+SELTHALAA+RSRLAAAAEAAGRNVGEIELLPITKFFPATDV IL RL
Sbjct 1 MVVDLSAQADRQSELTHALAAVRSRLAAAAEAAGRNVGEIELLPITKFFPATDVVILCRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCR+VGESREQEASAK AE+ RLLAA GG+HWHMVGRIQRNK SLARWAHTAHS
Sbjct 61 GCRAVGESREQEASAKAAEVARLLAAPPRAGLGGIHWHMVGRIQRNKVRSLARWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDS RLVTALDRAV AALAE RR LRVYVQVSLDGD SRGGVD T PGAVD ICAQV
Sbjct 121 VDSPRLVTALDRAVTAALAERRRDRPLRVYVQVSLDGDVSRGGVDITAPGAVDEICAQVD 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
+ GLELVGLMGIPPLDWDPDEAFDRLQSEHNRVR FP A+GLSAGMS D E AVKHGS
Sbjct 181 AAPGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRESFPGAVGLSAGMSADFETAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRLRSP
Sbjct 241 TCVRVGTALLGPRRLRSP 258
>gi|183983178|ref|YP_001851469.1| hypothetical protein MMAR_3188 [Mycobacterium marinum M]
gi|183176504|gb|ACC41614.1| conserved protein [Mycobacterium marinum M]
Length=261
Score = 375 bits (962), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 191/258 (75%), Positives = 219/258 (85%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
M D+SA +R+SELTHALA +RSRLAAAAEAAGR V EIELLPITKFFPATDVAIL RL
Sbjct 4 MVVDISAQGERQSELTHALAVVRSRLAAAAEAAGRKVSEIELLPITKFFPATDVAILARL 63
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCR+VGESR+QEASAK+AEL RL +A S G+ WHMVG+IQRNK SLA WAHTAHS
Sbjct 64 GCRAVGESRDQEASAKVAELARLFSAPIRSGSRGIQWHMVGQIQRNKVRSLANWAHTAHS 123
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
+D+ +LVTALDRA+ A+A+ RRG LRVYVQVSLDGD SRGGVD T PGAVDRICAQV
Sbjct 124 IDTPQLVTALDRAITTAIADRRRGNPLRVYVQVSLDGDVSRGGVDMTDPGAVDRICAQVS 183
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
+++ LEL+GLMG+PP DWD ++AF+RLQSEH+RV FP A+ LSAGMS+DLE+AVKHGS
Sbjct 184 DAQSLELIGLMGVPPRDWDQEKAFERLQSEHSRVLESFPTAVRLSAGMSDDLEIAVKHGS 243
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLG RRLRSP
Sbjct 244 TCVRVGTALLGSRRLRSP 261
>gi|118618790|ref|YP_907122.1| hypothetical protein MUL_3496 [Mycobacterium ulcerans Agy99]
gi|118570900|gb|ABL05651.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=258
Score = 374 bits (961), Expect = 7e-102, Method: Compositional matrix adjust.
Identities = 191/258 (75%), Positives = 219/258 (85%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
M D+SA +R+SELTHALA +RSRLAAAAEAAGR V EIELLPITKFFPATDVAIL RL
Sbjct 1 MVVDISAQGERQSELTHALALVRSRLAAAAEAAGRKVSEIELLPITKFFPATDVAILARL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCR+VGESR+QEASAK+AEL R+ +A S G+ WHMVG+IQRNK SLA WAHTAHS
Sbjct 61 GCRAVGESRDQEASAKVAELARMFSAPMRSGSRGIQWHMVGQIQRNKVRSLANWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
+D+ +LVTALDRA+ A+A+ RRG LRV+VQVSLDGD SRGGVD T PGAVDRICAQV
Sbjct 121 IDTPQLVTALDRAITTAIADRRRGNPLRVHVQVSLDGDVSRGGVDMTDPGAVDRICAQVS 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
+S+ LEL+GLMG+PP DWD ++AF+RLQSEHNRV FP A+ LSAGMS+DLE+AVKHGS
Sbjct 181 DSQSLELIGLMGVPPRDWDQEKAFERLQSEHNRVLESFPTAVRLSAGMSDDLEIAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLG RRLRSP
Sbjct 241 TCVRVGTALLGSRRLRSP 258
>gi|294993534|ref|ZP_06799225.1| hypothetical protein Mtub2_03254 [Mycobacterium tuberculosis
210]
Length=189
Score = 369 bits (948), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 186/186 (100%), Positives = 186/186 (100%), Gaps = 0/186 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL
Sbjct 4 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 63
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS
Sbjct 64 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 123
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ
Sbjct 124 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 183
Query 181 ESEGLE 186
ESEGLE
Sbjct 184 ESEGLE 189
>gi|342859864|ref|ZP_08716517.1| hypothetical protein MCOL_13333 [Mycobacterium colombiense CECT
3035]
gi|342132996|gb|EGT86216.1| hypothetical protein MCOL_13333 [Mycobacterium colombiense CECT
3035]
Length=258
Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/258 (72%), Positives = 215/258 (84%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MA ++ A DRESELTHALA++RSRLAAAAEAAGRNVGEIE+LPITK+FPATDV L RL
Sbjct 1 MAVEIPAGGDRESELTHALASVRSRLAAAAEAAGRNVGEIEVLPITKYFPATDVVTLSRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCR +GESR+QEA+AK+AE+ RLLAA+ WHMVG IQRNKA S+ARWAHTAHS
Sbjct 61 GCRVIGESRDQEATAKVAEVTRLLAASGREDVANPRWHMVGHIQRNKARSVARWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDS+ LV+ALD+ V AAL + RR +R+YVQVSLDGD SRGGVD + PGAVD++C QV+
Sbjct 121 VDSAHLVSALDKGVAAALDDGRRTAPMRIYVQVSLDGDESRGGVDISRPGAVDQVCDQVE 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
+S+ L+LVGLMGIPPLD +PDEAFDRL+ EH RV +A+GLSAGMSND E+AVKHGS
Sbjct 181 DSKNLDLVGLMGIPPLDSNPDEAFDRLRCEHRRVLESHRNAVGLSAGMSNDFEIAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGPRRL SP
Sbjct 241 TCVRVGTALLGPRRLPSP 258
>gi|254821929|ref|ZP_05226930.1| hypothetical protein MintA_18497 [Mycobacterium intracellulare
ATCC 13950]
Length=258
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/258 (74%), Positives = 215/258 (84%), Gaps = 0/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MA D+S DRESELTHALAA+RSRLAAAA+AAGRN EIE+LPITK+FPA DV L RL
Sbjct 1 MAVDMSNGGDRESELTHALAAVRSRLAAAAQAAGRNAAEIEVLPITKYFPAIDVVTLSRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCR+VGESR+QEA+AK+AE+ RLLAA E + G WHMVG IQRNKA S+A WAHTAHS
Sbjct 61 GCRAVGESRDQEATAKVAEVTRLLAAPERANVGNPRWHMVGHIQRNKARSVACWAHTAHS 120
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
VDS++LVTALDR V AALAE RR + +R+YVQVSLDGD SRGGVD + PGAVD++CAQV+
Sbjct 121 VDSTQLVTALDRGVAAALAEGRRTDPMRIYVQVSLDGDESRGGVDISRPGAVDQMCAQVE 180
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
E+ L+L GLM IPPLD DPDEAFDRLQSEH RV +A+GLSAGMSND E+AVKHGS
Sbjct 181 EASNLDLAGLMAIPPLDSDPDEAFDRLQSEHRRVLESHRNAVGLSAGMSNDFEIAVKHGS 240
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLG RRL SP
Sbjct 241 TCVRVGTALLGRRRLPSP 258
>gi|15827439|ref|NP_301702.1| DNA-binding protein [Mycobacterium leprae TN]
gi|221229916|ref|YP_002503332.1| putative DNA-binding protein [Mycobacterium leprae Br4923]
gi|13092989|emb|CAC31300.1| possible DNA-binding protein [Mycobacterium leprae]
gi|219933023|emb|CAR71014.1| possible DNA-binding protein [Mycobacterium leprae Br4923]
Length=260
Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/258 (74%), Positives = 214/258 (83%), Gaps = 1/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAAD+ DRESEL HALA +RSRLAAA++AAGRNVGEIELLPI+KFFPATDVAIL RL
Sbjct 4 MAADIDLQGDRESELMHALATVRSRLAAASQAAGRNVGEIELLPISKFFPATDVAILSRL 63
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESR QEAS K AE LL + S +HWHMVG+IQRNK SLA+WAHTAHS
Sbjct 64 GCRSVGESRAQEASTKAAEFAELLGVSREEKSS-IHWHMVGQIQRNKVRSLAQWAHTAHS 122
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
+DS +LV ALDRAV AALA RR + L+VYVQ+SLDGD SRGGV+ T PGAVDR+CAQV+
Sbjct 123 IDSLQLVAALDRAVAAALAGGRREQPLQVYVQISLDGDISRGGVNVTAPGAVDRVCAQVE 182
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ES+ LELVGLMGIPPL W+PD+AF++L+ EH RV P AIGLSAGMSND E+AVKHGS
Sbjct 183 ESKSLELVGLMGIPPLGWNPDQAFEQLRLEHRRVLRSHPDAIGLSAGMSNDFEIAVKHGS 242
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGP RLRSP
Sbjct 243 TCVRVGTALLGPSRLRSP 260
>gi|15214403|sp|Q9CCE2.2|Y919_MYCLE RecName: Full=UPF0001 protein ML0919
Length=257
Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/258 (74%), Positives = 214/258 (83%), Gaps = 1/258 (0%)
Query 1 MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRL 60
MAAD+ DRESEL HALA +RSRLAAA++AAGRNVGEIELLPI+KFFPATDVAIL RL
Sbjct 1 MAADIDLQGDRESELMHALATVRSRLAAASQAAGRNVGEIELLPISKFFPATDVAILSRL 60
Query 61 GCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHS 120
GCRSVGESR QEAS K AE LL + S +HWHMVG+IQRNK SLA+WAHTAHS
Sbjct 61 GCRSVGESRAQEASTKAAEFAELLGVSREEKSS-IHWHMVGQIQRNKVRSLAQWAHTAHS 119
Query 121 VDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQ 180
+DS +LV ALDRAV AALA RR + L+VYVQ+SLDGD SRGGV+ T PGAVDR+CAQV+
Sbjct 120 IDSLQLVAALDRAVAAALAGGRREQPLQVYVQISLDGDISRGGVNVTAPGAVDRVCAQVE 179
Query 181 ESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGS 240
ES+ LELVGLMGIPPL W+PD+AF++L+ EH RV P AIGLSAGMSND E+AVKHGS
Sbjct 180 ESKSLELVGLMGIPPLGWNPDQAFEQLRLEHRRVLRSHPDAIGLSAGMSNDFEIAVKHGS 239
Query 241 TCVRVGTALLGPRRLRSP 258
TCVRVGTALLGP RLRSP
Sbjct 240 TCVRVGTALLGPSRLRSP 257
>gi|296166015|ref|ZP_06848467.1| alanine racemase domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898636|gb|EFG78190.1| alanine racemase domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=262
Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/253 (72%), Positives = 212/253 (84%), Gaps = 0/253 (0%)
Query 6 SAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSV 65
+A+ DRE+ELTHALAA+RSRLAAAAEAAGRNVGEIELLPITKFFPATDV L RLGCR+V
Sbjct 9 AAHRDRETELTHALAAVRSRLAAAAEAAGRNVGEIELLPITKFFPATDVVTLSRLGCRAV 68
Query 66 GESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSR 125
GESR+QEASAK++E+ +LLAA+ + WHMVG IQRNKA S+ARWAHTAHSVDS
Sbjct 69 GESRDQEASAKVSEVTKLLAASSRSDGPALRWHMVGHIQRNKARSVARWAHTAHSVDSLH 128
Query 126 LVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGL 185
LV+ALD+ V AA+AE RR + +RVY+Q+SLDGD SRGGVD + PGAVD++CAQ +E++ L
Sbjct 129 LVSALDKGVSAAIAEGRRADPMRVYIQISLDGDASRGGVDISAPGAVDQLCAQAEEAKHL 188
Query 186 ELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRV 245
EL GLM IPPL DPD AF RL++EH RV P+A+GLSAGMS+D E+AVKHGSTCVRV
Sbjct 189 ELAGLMAIPPLGSDPDAAFGRLRTEHLRVLQSHPNAVGLSAGMSDDFEIAVKHGSTCVRV 248
Query 246 GTALLGPRRLRSP 258
GTALLGPR L SP
Sbjct 249 GTALLGPRPLPSP 261
>gi|41407990|ref|NP_960826.1| hypothetical protein MAP1892c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396344|gb|AAS04209.1| hypothetical protein MAP_1892c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=264
Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/249 (73%), Positives = 206/249 (83%), Gaps = 0/249 (0%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DRE+ELTHALAA+RSRLAAAAEAAGRNV EIE+LP+TKFFPATDV L RLGCR+VGESR
Sbjct 16 DRETELTHALAAVRSRLAAAAEAAGRNVAEIEVLPVTKFFPATDVVTLSRLGCRAVGESR 75
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA+AK+AE+ RLLA + + WHMVG IQRNKA S+ARWAHTAHSVDS+ LV+A
Sbjct 76 DQEATAKVAEVTRLLATSARTNVAIPRWHMVGHIQRNKARSVARWAHTAHSVDSTHLVSA 135
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDR V AALA+ R + +RVYVQVSLDGD SRGGVD + PGAVD +CAQV + L+LVG
Sbjct 136 LDRGVAAALADGGRTDPMRVYVQVSLDGDESRGGVDISRPGAVDEVCAQVAAANNLDLVG 195
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM IPPL+ DPDEAFDRLQSEH RV +A+GLSAGMS+D E+AVKHGSTCVRVGTAL
Sbjct 196 LMAIPPLNSDPDEAFDRLQSEHRRVLETHRNAVGLSAGMSDDFEIAVKHGSTCVRVGTAL 255
Query 250 LGPRRLRSP 258
LG R L SP
Sbjct 256 LGRRPLPSP 264
>gi|254775015|ref|ZP_05216531.1| hypothetical protein MaviaA2_10124 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=261
Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/249 (73%), Positives = 206/249 (83%), Gaps = 0/249 (0%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DRE+ELTHALAA+RSRLAAAAEAAGRNV EIE+LP+TKFFPATDV L RLGCR+VGESR
Sbjct 13 DRETELTHALAAVRSRLAAAAEAAGRNVAEIEVLPVTKFFPATDVVTLSRLGCRAVGESR 72
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA+AK+AE+ RLLA + + WHMVG IQRNKA S+ARWAHTAHSVDS+ LV+A
Sbjct 73 DQEATAKVAEVTRLLATSARTNVAIPRWHMVGHIQRNKARSVARWAHTAHSVDSTHLVSA 132
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDR V AALA+ R + +RVYVQVSLDGD SRGGVD + PGAVD +CAQV + L+LVG
Sbjct 133 LDRGVAAALADGGRTDPMRVYVQVSLDGDESRGGVDISRPGAVDEVCAQVAAANNLDLVG 192
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM IPPL+ DPDEAFDRLQSEH RV +A+GLSAGMS+D E+AVKHGSTCVRVGTAL
Sbjct 193 LMAIPPLNSDPDEAFDRLQSEHRRVLETHRNAVGLSAGMSDDFEIAVKHGSTCVRVGTAL 252
Query 250 LGPRRLRSP 258
LG R L SP
Sbjct 253 LGRRPLPSP 261
>gi|336461938|gb|EGO40790.1| pyridoxal phosphate enzyme, YggS family [Mycobacterium avium
subsp. paratuberculosis S397]
Length=261
Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/249 (73%), Positives = 206/249 (83%), Gaps = 0/249 (0%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DRE+ELTHALAA+RSRLAAAAEAAGRNV EIE+LP+TKFFPATDV L RLGCR+VGESR
Sbjct 13 DRETELTHALAAVRSRLAAAAEAAGRNVAEIEVLPVTKFFPATDVVTLSRLGCRAVGESR 72
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA+AK+AE+ RLLA + + WHMVG IQRNKA S+ARWAHTAHSVDS+ LV+A
Sbjct 73 DQEATAKVAEVTRLLATSARTNVAIPRWHMVGHIQRNKARSVARWAHTAHSVDSTHLVSA 132
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDR V AALA+ R + +RVYVQVSLDGD SRGGVD + PGAVD +CAQV + L+LVG
Sbjct 133 LDRGVAAALADGGRTDPMRVYVQVSLDGDESRGGVDISRPGAVDEVCAQVAAANNLDLVG 192
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM IPPL+ DPDEAFDRLQSEH RV +A+GLSAGMS+D E+AVKHGSTCVRVGTAL
Sbjct 193 LMAIPPLNSDPDEAFDRLQSEHRRVLETHRNAVGLSAGMSDDFEIAVKHGSTCVRVGTAL 252
Query 250 LGPRRLRSP 258
LG R L SP
Sbjct 253 LGRRPLPSP 261
>gi|118466416|ref|YP_881546.1| hypothetical protein MAV_2342 [Mycobacterium avium 104]
gi|118167703|gb|ABK68600.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=261
Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 180/249 (73%), Positives = 206/249 (83%), Gaps = 0/249 (0%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DRE+ELTHALAA+RSRLAAAAEAAGRNV EIE+LP+TKFFPATDV L RLGCR+VGESR
Sbjct 13 DRETELTHALAAVRSRLAAAAEAAGRNVAEIEVLPVTKFFPATDVVTLSRLGCRAVGESR 72
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA+AK+AE+ RLLA + + WHMVG IQRNKA S+ARWAHTAHSVDS+ LV+A
Sbjct 73 DQEATAKVAEVTRLLATSARTNVAIPRWHMVGHIQRNKARSVARWAHTAHSVDSTHLVSA 132
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDR V AALA+ R + +RVYVQVSLDGD SRGGVD + PGAVD +CAQV + L+LVG
Sbjct 133 LDRGVAAALADGGRIDPMRVYVQVSLDGDESRGGVDISRPGAVDEVCAQVAAANNLDLVG 192
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM IPPL+ DPDEAFDRLQSEH RV +A+GLSAGMS+D E+AVKHGSTCVRVGTAL
Sbjct 193 LMAIPPLNSDPDEAFDRLQSEHRRVLETHRNAVGLSAGMSDDFEIAVKHGSTCVRVGTAL 252
Query 250 LGPRRLRSP 258
LG R L SP
Sbjct 253 LGRRPLPSP 261
>gi|120404490|ref|YP_954319.1| alanine racemase domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957308|gb|ABM14313.1| alanine racemase domain protein [Mycobacterium vanbaalenii PYR-1]
Length=275
Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/248 (60%), Positives = 182/248 (74%), Gaps = 6/248 (2%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R++EL+ AL A+R R+A AAEAAGR+ G+IELLP+TKFFPA+DV L RLGC + GESR+
Sbjct 5 RDAELSLALTALRLRVARAAEAAGRDAGDIELLPVTKFFPASDVVALHRLGCSAFGESRD 64
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK+ E+ L+ + + WHMVGRIQRNKA S+A+WA+ AHSVDS +++ AL
Sbjct 65 QEAAAKVEEVGGLVG------NDPIRWHMVGRIQRNKARSVAQWAYAAHSVDSPKVIAAL 118
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
DRA AL + RR LRVY+QVSLDGD +RGGVD +D +C V + GLE VGL
Sbjct 119 DRAAEEALDDGRRPAPLRVYLQVSLDGDEARGGVDVAATDRIDDLCGAVDSARGLEFVGL 178
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M IPPL+ D EAF RL+ E +RV+ F +GLSAGMS DLE AV+HGSTCVRVGTALL
Sbjct 179 MAIPPLNADAGEAFARLERERDRVQRRFQQRLGLSAGMSGDLEEAVRHGSTCVRVGTALL 238
Query 251 GPRRLRSP 258
G R L SP
Sbjct 239 GSRPLTSP 246
>gi|145223580|ref|YP_001134258.1| alanine racemase domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|145216066|gb|ABP45470.1| alanine racemase domain protein [Mycobacterium gilvum PYR-GCK]
Length=279
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 143/249 (58%), Positives = 181/249 (73%), Gaps = 3/249 (1%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
+RE+EL AL A+R RLA AAE+AGR+V EIELLP+ KFFPA+DV L+RLGC + ESR
Sbjct 4 EREAELRAALDALRVRLARAAESAGRDVAEIELLPVIKFFPASDVLALYRLGCDAFAESR 63
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA+AK+ ++ R++ + E + WHMVGRIQRNKA S+A WA+ AHSVDS ++V A
Sbjct 64 DQEATAKIEDVARVVGSRE---DTPIRWHMVGRIQRNKARSVAEWAYAAHSVDSVKVVAA 120
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
L+R+ AL E RR E LRV+ Q+SLDGD +RGGVD VD +CA + + GL G
Sbjct 121 LERSASTALEEGRRTEPLRVFAQLSLDGDEARGGVDVDATERVDELCAAMDRAGGLTFAG 180
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
+M IPPL DP EAF RL+ E +RV+ + +GLSAGMS DLE AV+HGSTCVRVGTAL
Sbjct 181 MMAIPPLGADPGEAFARLRQERDRVQRDYEQRLGLSAGMSGDLEAAVRHGSTCVRVGTAL 240
Query 250 LGPRRLRSP 258
+G R L SP
Sbjct 241 MGSRPLTSP 249
>gi|169629098|ref|YP_001702747.1| hypothetical protein MAB_2011 [Mycobacterium abscessus ATCC 19977]
gi|169241065|emb|CAM62093.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=239
Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 146/247 (60%), Positives = 181/247 (74%), Gaps = 11/247 (4%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R EL+ AL ++R R+ AAE AGR+ GEI+LLP+TKFFPA+DV L+RLGCR GESR+
Sbjct 3 RAEELSAALCSVRERVRRAAEIAGRDPGEIQLLPVTKFFPASDVEELYRLGCREFGESRD 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK+A L+ + GH+ + WHMVG +QRNKA S+A WAH+ HSVD++RLVTAL
Sbjct 63 QEAAAKVALLD------QAGHAD-IRWHMVGNLQRNKAKSVAHWAHSVHSVDNARLVTAL 115
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
D A A + E L +Y+QVSLDGD +RGGVD +D++CAQV SE LEL GL
Sbjct 116 DGARGAG----EKREPLGIYLQVSLDGDNARGGVDIAAADEIDQLCAQVVASEHLELAGL 171
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M +PP + DPD+AF RLQ EH RVR +P A LSAGMSNDLE A+K+GSTCVRVGTAL+
Sbjct 172 MALPPREADPDQAFRRLQQEHERVRDRYPQANRLSAGMSNDLEAAIKYGSTCVRVGTALM 231
Query 251 GPRRLRS 257
G R L S
Sbjct 232 GQRPLTS 238
>gi|118470091|ref|YP_888497.1| hypothetical protein MSMEG_4220 [Mycobacterium smegmatis str.
MC2 155]
gi|118171378|gb|ABK72274.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=291
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/228 (61%), Positives = 166/228 (73%), Gaps = 6/228 (2%)
Query 31 EAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESREQEASAKMAELNRLLAAAELG 90
E+AGRNVGEIELLP+TKFFP +D+ IL +LGC S GESREQEA+ K+AE+ L A
Sbjct 42 ESAGRNVGEIELLPVTKFFPGSDIVILNQLGCLSFGESREQEAANKIAEVRAELPDAP-- 99
Query 91 HSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTALDRAVVAALAEHRRGERLRVY 150
+ WHM+GRIQRNKA ++A WA+ AHSVD++RL+ ALDR AL R E LRVY
Sbjct 100 ----IRWHMIGRIQRNKARAVAGWAYAAHSVDNARLIAALDRGAADALGRGVRSEPLRVY 155
Query 151 VQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGLMGIPPLDWDPDEAFDRLQSE 210
+Q+SLDGD RGGVD P VD +CA + ++GL GLM IPPL D DEAF RL +E
Sbjct 156 LQISLDGDAERGGVDIGDPDLVDELCAAIDGADGLTFTGLMAIPPLGADADEAFARLAAE 215
Query 211 HNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALLGPRRLRSP 258
+RV+ +P + +SAGMSNDLE AVKHGSTCVRVGTAL+GPR L SP
Sbjct 216 RDRVQKAYPQRLEMSAGMSNDLESAVKHGSTCVRVGTALMGPRPLTSP 263
>gi|315443927|ref|YP_004076806.1| pyridoxal phosphate enzyme, YggS family [Mycobacterium sp. Spyr1]
gi|315262230|gb|ADT98971.1| pyridoxal phosphate enzyme, YggS family [Mycobacterium sp. Spyr1]
Length=279
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/249 (58%), Positives = 183/249 (74%), Gaps = 3/249 (1%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
+RE+EL AL A+R+RLA AAE+AGR+V EIELLP+TKFFPA+DV L+RLGC + ESR
Sbjct 4 EREAELRAALDALRARLARAAESAGRDVAEIELLPVTKFFPASDVLALYRLGCDAFAESR 63
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA+AK+ ++ R++ + E + WHMVGRIQRNKA S+A WA+ AHSVDS ++V A
Sbjct 64 DQEATAKIEDVARVVGSRE---DTPIRWHMVGRIQRNKARSVAEWAYAAHSVDSVKVVAA 120
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
L+R+ AL E RR E LRV+ Q+SLDGD +RGGVD VD +CA + + GL G
Sbjct 121 LERSASTALEEGRRTEPLRVFAQLSLDGDEARGGVDVDATERVDELCAAMDRAGGLTFAG 180
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
+M IPPL DP EAF RL+ E +RV+ + +GLSAGMS DLE AV+HGSTCVRVGTAL
Sbjct 181 MMAIPPLGADPGEAFARLRQERDRVQRDYEQRLGLSAGMSGDLEAAVRHGSTCVRVGTAL 240
Query 250 LGPRRLRSP 258
+G R L SP
Sbjct 241 MGSRPLTSP 249
>gi|108800217|ref|YP_640414.1| hypothetical protein Mmcs_3251 [Mycobacterium sp. MCS]
gi|119869345|ref|YP_939297.1| alanine racemase domain-containing protein [Mycobacterium sp.
KMS]
gi|108770636|gb|ABG09358.1| Protein of unknown function UPF0001 [Mycobacterium sp. MCS]
gi|119695434|gb|ABL92507.1| alanine racemase domain protein [Mycobacterium sp. KMS]
Length=254
Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/254 (62%), Positives = 181/254 (72%), Gaps = 13/254 (5%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
RESEL +LAA+R RLA AA+AAGR+V EI LLP+TKFFPA+D+ IL+ LGCR ESRE
Sbjct 8 RESELAASLAALRERLARAADAAGRDVAEIALLPVTKFFPASDIRILYGLGCREFAESRE 67
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEAS K AEL A E V WHMVGRIQRNKA ++ARWA+ AHSVDS++L+ AL
Sbjct 68 QEASKKAAEL-----AGEFAGDP-VRWHMVGRIQRNKARAVARWAYAAHSVDSAKLIAAL 121
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
DR AL + R LRVY+Q+SLDGD RGGVD P +D++CA V +E LE VGL
Sbjct 122 DRGAGDALGDGVRTAPLRVYLQLSLDGDVERGGVDVDQPELIDQLCAAVDSAEALEFVGL 181
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIG------LSAGMSNDLEVAVKHGSTCVR 244
MGIPPL D + AF RLQSE RVR IG LSAGMS DLE+AV+HGSTCVR
Sbjct 182 MGIPPLGADAESAFARLQSEWRRVRQRRKE-IGRGQRFELSAGMSGDLEMAVRHGSTCVR 240
Query 245 VGTALLGPRRLRSP 258
VGTAL+GPR L SP
Sbjct 241 VGTALMGPRPLTSP 254
>gi|126435840|ref|YP_001071531.1| alanine racemase domain-containing protein [Mycobacterium sp.
JLS]
gi|126235640|gb|ABN99040.1| alanine racemase domain protein [Mycobacterium sp. JLS]
Length=254
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/254 (62%), Positives = 180/254 (71%), Gaps = 13/254 (5%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
RESEL +LAA+R RLA AA+AAGR+V EI LLP+TKFFPA+D+ IL+ LGCR ESRE
Sbjct 8 RESELAASLAALRERLARAADAAGRDVAEIALLPVTKFFPASDIRILYGLGCREFAESRE 67
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEAS K AEL A E V WHMVGRIQRNKA ++ARWA+ AHSVDS++L+ AL
Sbjct 68 QEASKKAAEL-----AGEFAGDP-VRWHMVGRIQRNKARAVARWAYAAHSVDSAKLIAAL 121
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
DR AL + R LRVY+Q+SLDGD RGGVD P +D++CA V +E LE VGL
Sbjct 122 DRGAGDALGDGVRTAPLRVYLQLSLDGDVERGGVDVDQPELIDQLCAAVDSAEALEFVGL 181
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIG------LSAGMSNDLEVAVKHGSTCVR 244
MGIPPL D AF RLQSE RVR IG LSAGMS DLE+AV+HGSTCVR
Sbjct 182 MGIPPLGADAGSAFARLQSEWRRVRQRRKE-IGRGQRFELSAGMSGDLEMAVRHGSTCVR 240
Query 245 VGTALLGPRRLRSP 258
VGTAL+GPR L SP
Sbjct 241 VGTALMGPRPLTSP 254
>gi|54023739|ref|YP_117981.1| hypothetical protein nfa17710 [Nocardia farcinica IFM 10152]
gi|54015247|dbj|BAD56617.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=251
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/244 (57%), Positives = 167/244 (69%), Gaps = 12/244 (4%)
Query 14 ELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESREQEA 73
EL+ L A+ +R+ AA A+GR + +LP+TKFFPA DVAIL LG R GESREQEA
Sbjct 19 ELSANLDALLARIEAACRASGRAPDSVRMLPVTKFFPARDVAILHDLGLREFGESREQEA 78
Query 74 SAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTALDRA 133
SAK+AEL+ L G+ WHM+GR+QRNKA +ARWAHT HSVDS RL TALDR
Sbjct 79 SAKVAELSGL---------DGIAWHMIGRLQRNKAKVVARWAHTVHSVDSERLATALDRG 129
Query 134 VVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGLMGI 193
AALA R E +RV VQVSLD D +RGGV P +D + ++ +EGL+L GLM I
Sbjct 130 ACAALAAGERAEPVRVLVQVSLDADPARGGV---VPAELDALADRIAAAEGLQLAGLMAI 186
Query 194 PPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALLGPR 253
PPLD +PD AF L++ H R+ A P A LSAGMS DLE A+ HGSTCVRVGTAL+G R
Sbjct 187 PPLDAEPDSAFALLETLHTRILARHPGARELSAGMSGDLESAIAHGSTCVRVGTALMGAR 246
Query 254 RLRS 257
+ S
Sbjct 247 PITS 250
>gi|111018096|ref|YP_701068.1| hypothetical protein RHA1_ro01083 [Rhodococcus jostii RHA1]
gi|110817626|gb|ABG92910.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=241
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/247 (55%), Positives = 164/247 (67%), Gaps = 9/247 (3%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R E+ AL +R+RL AA AGR+ ++ LLP+TKFFP +D IL+ LGCR GESRE
Sbjct 3 RVGEIEAALGTVRARLDAACRDAGRDPADVSLLPVTKFFPESDARILYDLGCREFGESRE 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK+AE ++ V WHM+G +QRNKA ++A WA+ HSVDS RLV AL
Sbjct 63 QEATAKIAEFRTVVT------DSSVRWHMIGHLQRNKAKAVAHWAYAIHSVDSERLVGAL 116
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
RA AL R E LRV +QVSLDGD RGG ++R+ AQVQ S GLE GL
Sbjct 117 GRAATTALEAGERPEPLRVLLQVSLDGDPQRGGA---AIADLERLAAQVQSSPGLEYRGL 173
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M +PP+D DPD AF+ LQ H R+R P A LSAGM+NDLE AV+HGSTCVRVGTALL
Sbjct 174 MAVPPIDADPDAAFEELQKIHARLRRDHPDATDLSAGMTNDLEHAVRHGSTCVRVGTALL 233
Query 251 GPRRLRS 257
G R + S
Sbjct 234 GSRPITS 240
>gi|333919003|ref|YP_004492584.1| hypothetical protein AS9A_1332 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481224|gb|AEF39784.1| hypothetical protein AS9A_1332 [Amycolicicoccus subflavus DQS3-9A1]
Length=247
Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 136/248 (55%), Positives = 165/248 (67%), Gaps = 9/248 (3%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R E+ A+AA R RL +A AAGR E+ LLP+TKFFPA+DV IL+RLG R GESR
Sbjct 9 RAREIADAVAAQRDRLRSACSAAGRAEREVALLPVTKFFPASDVQILYRLGFRDFGESRV 68
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK+ E AEL V WHM+G++QR KA ++ARWA + SVDSS+LV+AL
Sbjct 69 QEAAAKVEEF------AELEPEADVRWHMIGQLQRKKANAVARWASSVQSVDSSKLVSAL 122
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
+RAV +A R L VY+QVSLD D RGG P +D + AQV +EGL L GL
Sbjct 123 ERAVQSARQRGDRVSDLSVYLQVSLDQDEERGG---APPDELDALGAQVDGAEGLRLAGL 179
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M +PPL P+EAF L H R A FP A+ LSAGMS D E+AV+HGSTCVRVGTALL
Sbjct 180 MSVPPLGAVPEEAFAELSDIHTRFMARFPSAVELSAGMSGDAEIAVRHGSTCVRVGTALL 239
Query 251 GPRRLRSP 258
G R + SP
Sbjct 240 GLRTITSP 247
>gi|229490375|ref|ZP_04384216.1| pyridoxal phosphate enzyme, YggS family [Rhodococcus erythropolis
SK121]
gi|229322665|gb|EEN88445.1| pyridoxal phosphate enzyme, YggS family [Rhodococcus erythropolis
SK121]
Length=244
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/244 (55%), Positives = 173/244 (71%), Gaps = 7/244 (2%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R +E++ AL ++R+RLAAA AAGR V ++ LLP+TKFFPA+D IL+ LGCR GESRE
Sbjct 2 RLTEISTALDSVRARLAAACLAAGREVSDVALLPVTKFFPASDARILYELGCREFGESRE 61
Query 71 QEASAKMAELNRLLAAAELGH-SGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
QEA K+A+ + AA+ G V WHM+G++QRNKA S+A+WA+ HSVDS+RL A
Sbjct 62 QEAVEKVADFD---GAAQTGAIDDPVRWHMIGQLQRNKARSVAKWAYAIHSVDSARLADA 118
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDRA ++AL++ R E LR +QVSLDGD +RGGV + G + + +++ +EGLE G
Sbjct 119 LDRAALSALSDGERTEPLRALIQVSLDGDPARGGVPT---GELTPLAERIESAEGLEFAG 175
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM +PPL DPDE F+ L+ H + P A LSAGM+ DLE AV+HGSTCVRVGTAL
Sbjct 176 LMAVPPLGSDPDEQFEILRRAHLLILESHPRATELSAGMTGDLEAAVRHGSTCVRVGTAL 235
Query 250 LGPR 253
LG R
Sbjct 236 LGSR 239
>gi|226360225|ref|YP_002778003.1| hypothetical protein ROP_08110 [Rhodococcus opacus B4]
gi|226238710|dbj|BAH49058.1| hypothetical protein [Rhodococcus opacus B4]
Length=257
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 136/247 (56%), Positives = 163/247 (66%), Gaps = 9/247 (3%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R ++ AL A+R+RL AA AGR+ E+ LLP+TKFFP +D IL+ LGCR GESRE
Sbjct 19 RTGDIEAALGAVRARLDAACLQAGRDPAEVSLLPVTKFFPESDARILYDLGCREFGESRE 78
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK+AE + V WHM+G +QRNKA ++A WA+ HSVDS RLV AL
Sbjct 79 QEATAKIAEFRTAVT------DPSVRWHMIGHLQRNKAKAVAHWAYAIHSVDSERLVGAL 132
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
RA AAL R LRV +QVSLDGD RGG +DR+ AQVQ S GLE GL
Sbjct 133 GRAAAAALEAGERPAPLRVLLQVSLDGDPQRGGA---AIADLDRLAAQVQSSPGLEYRGL 189
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M +PP+D DPD AF+ L H R+R P A LSAGM+NDLE AV+HGSTCVRVGTALL
Sbjct 190 MAVPPIDADPDAAFEELHKIHARLRRDHPDATELSAGMTNDLEHAVRHGSTCVRVGTALL 249
Query 251 GPRRLRS 257
G R + S
Sbjct 250 GARPITS 256
>gi|226307034|ref|YP_002766994.1| hypothetical protein RER_35470 [Rhodococcus erythropolis PR4]
gi|226186151|dbj|BAH34255.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=249
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/244 (55%), Positives = 172/244 (71%), Gaps = 7/244 (2%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R +E++ AL ++R+RLAAA AAGR V ++ LLP+TKFFPA+D IL+ LGCR GESRE
Sbjct 7 RLTEISTALDSVRARLAAACLAAGREVSDVALLPVTKFFPASDARILYELGCREFGESRE 66
Query 71 QEASAKMAELNRLLAAAELGH-SGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
QEA K+A+ + AA+ G V WHM+G++QRNKA S+A+WA+ HSVDS+RL A
Sbjct 67 QEAVEKVADFD---GAAQSGAIDDPVRWHMIGQLQRNKARSVAKWAYAIHSVDSARLADA 123
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDRA + AL++ R LRV +QVSLDGD +RGGV + G + + +++ +EGLE G
Sbjct 124 LDRAALGALSDGERKAPLRVLIQVSLDGDPARGGVPT---GELTPLAERIESAEGLEFAG 180
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM +PPL DPDE F+ L+ H + P A LSAGM+ DLE AV+HGSTCVRVGTAL
Sbjct 181 LMAVPPLGSDPDEQFEILRRAHLLILESHPRATELSAGMTGDLEAAVRHGSTCVRVGTAL 240
Query 250 LGPR 253
LG R
Sbjct 241 LGSR 244
>gi|312140137|ref|YP_004007473.1| alanine racemase [Rhodococcus equi 103S]
gi|311889476|emb|CBH48793.1| putative alanine racemase [Rhodococcus equi 103S]
Length=242
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/247 (53%), Positives = 160/247 (65%), Gaps = 8/247 (3%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R E+ AL +R+RL AA AGR E+ LLP+TKFFPA+DV +L+ LGCR+ GESRE
Sbjct 3 RHEEVASALTRVRARLEAACREAGREPSEVALLPVTKFFPASDVRVLYDLGCRAFGESRE 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
EAS K+AE + A+ + V WHM+GR+QRNK S+ RWA T HS+DS RL AL
Sbjct 63 PEASTKVAEFS-----ADPDVTEPVRWHMIGRLQRNKVKSVVRWADTVHSLDSGRLTDAL 117
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
AV AAL R + V VQVSLDGD SRGGV ++ + +V + GLEL GL
Sbjct 118 SGAVAAALDAGERSRAVEVLVQVSLDGDPSRGGVPVAD---LESLADRVASAPGLELAGL 174
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M +PPL DPD AF +L H + + P A LSAGM+ DLE AV+HGSTCVRVGTALL
Sbjct 175 MAVPPLGADPDAAFAQLHEVHADLMRVHPGAGTLSAGMTGDLESAVRHGSTCVRVGTALL 234
Query 251 GPRRLRS 257
G R + S
Sbjct 235 GSRPIVS 241
>gi|325674381|ref|ZP_08154069.1| alanine racemase domain protein [Rhodococcus equi ATCC 33707]
gi|325554641|gb|EGD24315.1| alanine racemase domain protein [Rhodococcus equi ATCC 33707]
Length=242
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/247 (53%), Positives = 160/247 (65%), Gaps = 8/247 (3%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R E+ AL +R+RL AA AGR E+ LLP+TKFFPA+DV +L+ LGCR+ GESRE
Sbjct 3 RHEEVASALTRVRARLDAACRDAGREPSEVALLPVTKFFPASDVRVLYDLGCRAFGESRE 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
EAS K+AE + A+ + V WHM+GR+QRNK S+ RWA T HS+DS RL AL
Sbjct 63 PEASTKVAEFS-----ADPDVTEPVRWHMIGRLQRNKVKSVVRWADTVHSLDSGRLTDAL 117
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
AV AAL R + V VQVSLDGD SRGGV ++ + +V + GLEL GL
Sbjct 118 SGAVAAALDAGERSRAVEVLVQVSLDGDPSRGGVPVAD---LESLADRVASAPGLELAGL 174
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M +PPL DPD AF +L H + + P A LSAGM+ DLE AV+HGSTCVRVGTALL
Sbjct 175 MAVPPLGADPDAAFAQLHEVHADLMRVHPGAGTLSAGMTGDLESAVRHGSTCVRVGTALL 234
Query 251 GPRRLRS 257
G R + S
Sbjct 235 GSRPIVS 241
>gi|317508842|ref|ZP_07966483.1| alanine racemase domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
gi|316252866|gb|EFV12295.1| alanine racemase domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
Length=234
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 158/248 (64%), Gaps = 16/248 (6%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R +EL LA++R ++A A AGR+ E+ L+ +TKFFPA+D A+L+ LGCR GESR+
Sbjct 3 RRAELAERLASVREQVAEACARAGRDAREVTLVVVTKFFPASDAALLYELGCREFGESRD 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA AK+AEL + GV WHM+G+IQRNKA S+A WAH SVD +RLV A
Sbjct 63 QEARAKVAELGDSVP--------GVRWHMIGQIQRNKAKSIASWAHVVQSVDEARLVAAF 114
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
++AV R G+ L V VQVSLDGDG R G P V + Q+ SE L L GL
Sbjct 115 EKAV-----SERGGQPLDVLVQVSLDGDGRRSG---ALPEDVPALADQIAASEHLRLQGL 166
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M IPPL DP +A++RL H+ ++A P A LSAGMS D A+ GS+CVRVGTA+L
Sbjct 167 MAIPPLAADPAQAYERLARLHDALKADHPSATTLSAGMSGDFATAIAAGSSCVRVGTAIL 226
Query 251 GPRRLRSP 258
G R + SP
Sbjct 227 GARPIPSP 234
>gi|296140337|ref|YP_003647580.1| alanine racemase domain-containing protein [Tsukamurella paurometabola
DSM 20162]
gi|296028471|gb|ADG79241.1| alanine racemase domain protein [Tsukamurella paurometabola DSM
20162]
Length=236
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/247 (54%), Positives = 154/247 (63%), Gaps = 15/247 (6%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R EL LAA RSRL AA AAGR+ E+ LLP+TKFFPA+D+A+L LGC GE+RE
Sbjct 3 RRDELAEGLAATRSRLDAACRAAGRDRTEVALLPVTKFFPASDIALLQELGCTDFGENRE 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK AEL G HM+G IQRNKA S+ARWA HS+DS RL AL
Sbjct 63 QEAAAKAAELT------------GARLHMLGHIQRNKAKSVARWAAMVHSLDSIRLAGAL 110
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
+R+ AAL R L V +Q+SLDGD +RGGV A+ AQ S L L G+
Sbjct 111 ERSTEAALEAGVRAAPLDVLIQISLDGDPARGGVTRADLAALVETVAQ---SPSLRLRGV 167
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
MG+PPL+ DP+ AF L VR P A SAGMS DLE+AVK GSTCVRVGTA+L
Sbjct 168 MGVPPLEADPERAFTELAELWTDVRRDHPDADVFSAGMSGDLELAVKLGSTCVRVGTAIL 227
Query 251 GPRRLRS 257
G R L S
Sbjct 228 GRRPLTS 234
>gi|257056711|ref|YP_003134543.1| pyridoxal phosphate enzyme, YggS family [Saccharomonospora viridis
DSM 43017]
gi|256586583|gb|ACU97716.1| pyridoxal phosphate enzyme, YggS family [Saccharomonospora viridis
DSM 43017]
Length=244
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/248 (49%), Positives = 150/248 (61%), Gaps = 8/248 (3%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R EL AL + R+ A GR+ E+ L+ +TK FPATD A L LG R++GE+R+
Sbjct 5 RSEELATALRKITDRIEQACRRVGRSPDEVRLIAVTKTFPATDAAALLDLGVRNLGENRD 64
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA AK+ E+ +L A+ V WHMVGR+QRNKA S+ARWA SVDS RL AL
Sbjct 65 QEAVAKVREVGQLRPDAD------VRWHMVGRLQRNKARSVARWAAEVQSVDSLRLADAL 118
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
+AV AAL R L V VQ SLD D SRGG + + AQ + L L G+
Sbjct 119 TKAVRAALEAGERDRPLDVLVQASLDDDPSRGGCPIDDLSELADVIAQ--RGDYLRLRGV 176
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M + PL DP+ AF+RL + R+R P A +SAGMS DL+ A+ +GSTCVRVGTALL
Sbjct 177 MAVAPLGVDPEPAFERLAAVAERLRKDHPEATEISAGMSGDLDQAIAYGSTCVRVGTALL 236
Query 251 GPRRLRSP 258
G R L SP
Sbjct 237 GGRGLASP 244
>gi|330469286|ref|YP_004407029.1| alanine racemase domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328812257|gb|AEB46429.1| alanine racemase domain-containing protein [Verrucosispora maris
AB-18-032]
Length=248
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/248 (48%), Positives = 149/248 (61%), Gaps = 16/248 (6%)
Query 9 PDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGES 68
PDR +EL LA +R+R+A A A GR+ E+ ++ +TK +PA DV L LG VGE+
Sbjct 10 PDRRAELAAGLARVRTRIADACVAVGRDRTEVTMIAVTKTYPAADVIALAGLGVTDVGEN 69
Query 69 REQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVT 128
R+QEA+ K AE L A WH +GR+QRNK S+ R+A SVDS RL +
Sbjct 70 RDQEAAPK-AEQVALAGVAP-------RWHFIGRLQRNKVKSVVRYADVVQSVDSVRLAS 121
Query 129 ALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGV--DSTTPG-AVDRICAQVQESEGL 185
ALD A RR L V+VQVS+DGD SRGG DS P + + A V S GL
Sbjct 122 ALDAATTG-----RRDRPLEVFVQVSIDGDPSRGGSVPDSADPDIGLGPVTAAVAASAGL 176
Query 186 ELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRV 245
L GLM + PL W+P+ AF RL + VRA P A+ LSAGMS DLE A+ HG+T VRV
Sbjct 177 RLAGLMAVAPLGWEPERAFARLATIAETVRAEHPQAVALSAGMSGDLEAAIGHGATHVRV 236
Query 246 GTALLGPR 253
G+ALLG R
Sbjct 237 GSALLGMR 244
>gi|159038975|ref|YP_001538228.1| alanine racemase domain-containing protein [Salinispora arenicola
CNS-205]
gi|157917810|gb|ABV99237.1| alanine racemase domain protein [Salinispora arenicola CNS-205]
Length=248
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/254 (47%), Positives = 153/254 (61%), Gaps = 22/254 (8%)
Query 6 SAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSV 65
+A DR SEL L +R+R+A A AAGR++GE+ ++ +TK +PA+DV L LG V
Sbjct 7 AASSDRHSELAAGLTRVRTRVADACAAAGRDLGEVSMVAVTKTYPASDVIALVGLGATEV 66
Query 66 GESREQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSR 125
GE+R+QEASAK E+ AAA + WH +G++QRNKA S+ R+A SVDS R
Sbjct 67 GENRDQEASAKATEV----AAAGVTP----RWHFIGQLQRNKARSVVRYADVVQSVDSVR 118
Query 126 LVTALDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDR------ICAQV 179
L ALDRA R L V+VQVS+DG G+RGG PG+ D + V
Sbjct 119 LARALDRASATV-----RDRPLEVFVQVSIDGAGARGG---ALPGSADPEAGLEPVAEMV 170
Query 180 QESEGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHG 239
+GL L GLM + PL W+P+ AF RL R P A LSAGMS DLEVA+++G
Sbjct 171 AGMDGLRLAGLMAVAPLGWEPERAFARLAEVAAGFRVRHPQATLLSAGMSGDLEVAIRYG 230
Query 240 STCVRVGTALLGPR 253
+T VRVG+ALLG R
Sbjct 231 ATHVRVGSALLGMR 244
>gi|227488535|ref|ZP_03918851.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227091429|gb|EEI26741.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867]
Length=233
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/246 (48%), Positives = 146/246 (60%), Gaps = 17/246 (6%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
RE E+ L +R R+A A AAGR E+ LLP+TKF PA+DV IL LG +VGE+R+
Sbjct 3 REDEIAAGLQRVRQRIAEAKAAAGRT-DEVRLLPVTKFHPASDVEILHSLGIEAVGENRD 61
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA K AE + +HM+G+IQ KA S+ARWA SVDS LV AL
Sbjct 62 QEAKKKAAEFPSM------------AFHMLGQIQTKKANSVARWASAVQSVDSLTLVQAL 109
Query 131 DRAVVAALAE-HRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
DR + AL R E L VYVQ+SLDGD SRGGV V + ++ S L LVG
Sbjct 110 DRGMQLALDRGDRTTETLDVYVQLSLDGDESRGGV---IAADVPFLVEAIEGSTHLRLVG 166
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM +PP+ D DEAF + A H + SAGMS DLEVA+K+GST VRVGT +
Sbjct 167 LMCVPPVASDADEAFATALDVKQDLDARAGHPLEFSAGMSADLEVAIKNGSTLVRVGTDI 226
Query 250 LGPRRL 255
LGPR++
Sbjct 227 LGPRQI 232
>gi|227543139|ref|ZP_03973188.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227181127|gb|EEI62099.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866]
Length=233
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/246 (48%), Positives = 146/246 (60%), Gaps = 17/246 (6%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
RE E+ L +R R+A A AAGR E+ LLP+TKF PA+DV IL LG +VGE+R+
Sbjct 3 REDEIAAGLQRVRQRIAEAKAAAGRT-DEVCLLPVTKFHPASDVEILHSLGIEAVGENRD 61
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA K AE + +HM+G+IQ KA S+ARWA SVDS LV AL
Sbjct 62 QEAKKKAAEFPSM------------AFHMLGQIQTKKANSVARWASAVQSVDSLTLVQAL 109
Query 131 DRAVVAALAE-HRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
DR + AL R E L VYVQ+SLDGD SRGGV V + ++ S L LVG
Sbjct 110 DRGMQLALDRGDRTTETLDVYVQLSLDGDESRGGV---IAADVPFLVEAIEGSTHLRLVG 166
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM +PP+ D DEAF + A H + SAGMS DLEVA+K+GST VRVGT +
Sbjct 167 LMCVPPVASDADEAFATALDVKQDLDARAGHPLEFSAGMSADLEVAIKNGSTLVRVGTDI 226
Query 250 LGPRRL 255
LGPR++
Sbjct 227 LGPRQI 232
>gi|134102281|ref|YP_001107942.1| pyridoxal-5'-phosphate dependent enzyme [Saccharopolyspora erythraea
NRRL 2338]
gi|291003756|ref|ZP_06561729.1| pyridoxal-5'-phosphate dependent enzyme [Saccharopolyspora erythraea
NRRL 2338]
gi|133914904|emb|CAM05017.1| pyridoxal-5'-phosphate dependent enzyme [Saccharopolyspora erythraea
NRRL 2338]
Length=247
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/249 (49%), Positives = 149/249 (60%), Gaps = 9/249 (3%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
+R++E+ +L +R R+ AA AAGR E+ELL +TK FPA D A+L LG + E+R
Sbjct 8 ERKAEIAESLREVRERVDAACRAAGRQPEEVELLAVTKTFPAGDAALLADLGLTELAENR 67
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
EQEA K+AE AEL V WHM+G++QRNKA S+ RWA SVDS RL A
Sbjct 68 EQEARGKVAEF------AELRPEAAVRWHMIGQLQRNKARSVVRWADVVESVDSVRLAEA 121
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
L RA AL R E L V +QV LD RGG PG V + A++ L L G
Sbjct 122 LRRAAANALDAGERSEPLDVLIQVGLDDAAGRGG---CPPGDVSALAAEITRHSDLRLRG 178
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
+M + PL DPD AF L R++ +P A+ +SAGMS DLE AV HGST VRVGTAL
Sbjct 179 VMAVAPLGGDPDVAFATLSGIARRLQEDYPEAVEMSAGMSGDLESAVAHGSTRVRVGTAL 238
Query 250 LGPRRLRSP 258
LG RRL SP
Sbjct 239 LGGRRLISP 247
>gi|296394950|ref|YP_003659834.1| alanine racemase [Segniliparus rotundus DSM 44985]
gi|296182097|gb|ADG99003.1| alanine racemase domain protein [Segniliparus rotundus DSM 44985]
Length=229
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/249 (47%), Positives = 147/249 (60%), Gaps = 21/249 (8%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DR +EL L +R R+A+A +GR+ E+ L+ +TKFFPA+DVA+L+ LGCR GESR
Sbjct 2 DRRTELAGRLEQVRERIASACAKSGRDACEVTLVVVTKFFPASDVALLYELGCREFGESR 61
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
+QEA R AA + WHM+G+IQRNKA S+A WAH SVD SRLV A
Sbjct 62 DQEA--------RAKAAQLAEAAPQARWHMIGQIQRNKAKSIASWAHVVQSVDDSRLVAA 113
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
++ + L V VQVSLDGD R G + V + QV+ + L L G
Sbjct 114 FEKT----------AQPLDVLVQVSLDGDEKRSGAAAER---VFELADQVEAASNLRLKG 160
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM IPPL DP +AF L + H ++A P A LSAGMS D E A+ GS+CVRVG A+
Sbjct 161 LMAIPPLGADPAQAFAALAALHAALKAAHPDATALSAGMSGDFETAIAAGSSCVRVGAAI 220
Query 250 LGPRRLRSP 258
LG R + SP
Sbjct 221 LGSRPIPSP 229
>gi|255325339|ref|ZP_05366445.1| pyridoxal phosphate enzyme, YggS family [Corynebacterium tuberculostearicum
SK141]
gi|255297904|gb|EET77215.1| pyridoxal phosphate enzyme, YggS family [Corynebacterium tuberculostearicum
SK141]
Length=232
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/244 (44%), Positives = 149/244 (62%), Gaps = 17/244 (6%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DR+++L H L+A +++ A +GR +LLP+TKF PA D+A+L LG V E+R
Sbjct 3 DRKAQLEHNLSATLAKIERLAAQSGRK--PPQLLPVTKFHPAADIALLAELGVTDVAENR 60
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
EQEA AK EL +L +HM+G+IQ KA +ARWA + HS+DS +L A
Sbjct 61 EQEARAKATELPQL------------RFHMIGQIQTKKANHVARWAASVHSLDSLKLAHA 108
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
L+R V A R L V++QVS DGDG+RGGV +P A+D + V+E++ LEL G
Sbjct 109 LERGVSLAKERGERESNLPVFIQVSADGDGARGGV---SPEALDELVRAVEEAQHLELAG 165
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM +PPLD D E F ++ E +R+ + + SAGMS D+ A+ GS VRVGT++
Sbjct 166 LMVVPPLDADAGEVFRNVRGEVDRLSSELNRPLKFSAGMSADMAEAIAAGSDIVRVGTSI 225
Query 250 LGPR 253
+GPR
Sbjct 226 MGPR 229
>gi|311741534|ref|ZP_07715358.1| YggS family pyridoxal phosphate enzyme [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303704|gb|EFQ79783.1| YggS family pyridoxal phosphate enzyme [Corynebacterium pseudogenitalium
ATCC 33035]
Length=232
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/247 (44%), Positives = 152/247 (62%), Gaps = 23/247 (9%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DR+++L H L+ R+ + A +GR +LLP+TKF PA D+++L LG V E+R
Sbjct 3 DRKAQLEHNLSDTRAEIERLAAQSGRK--PPQLLPVTKFHPAADISLLADLGVTDVAENR 60
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
EQEA AK AEL +L +HM+G+IQ KA +ARWA + HS+DS +L A
Sbjct 61 EQEARAKAAELPQL------------RFHMIGQIQTKKANHVARWAASVHSLDSLKLAHA 108
Query 130 LDRAVVAALAEHRRGER---LRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLE 186
L+R V A RGER L V++QVS+DGDG+RGGV TP +D + V++++ LE
Sbjct 109 LERGVSLA---KERGEREGNLPVFIQVSVDGDGARGGV---TPDVLDEVVRAVEDAQHLE 162
Query 187 LVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVG 246
L GLM +PPLD D E F ++ E +R+ + + SAGMS D+ A+ GS VRVG
Sbjct 163 LAGLMVVPPLDADAGEVFRNVRGEVDRLSSELNRPLKFSAGMSADMAEAIAAGSDIVRVG 222
Query 247 TALLGPR 253
T+++GPR
Sbjct 223 TSIMGPR 229
>gi|256379757|ref|YP_003103417.1| alanine racemase domain-containing protein [Actinosynnema mirum
DSM 43827]
gi|255924060|gb|ACU39571.1| alanine racemase domain protein [Actinosynnema mirum DSM 43827]
Length=231
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/248 (49%), Positives = 150/248 (61%), Gaps = 19/248 (7%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
RE EL LA +R+R+A A E A R+ E+ LL +TK FPA+DV +L LG R E+++
Sbjct 3 REEELRLNLAEVRARIAKACETADRDPAEVTLLAVTKTFPASDVRLLHGLGLRDFAENKD 62
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA AK+AEL L A +W MVGR+QRNKA S+ WA SVDS+RLV AL
Sbjct 63 QEARAKVAELGDLDA----------NWRMVGRLQRNKARSVLTWADRIDSVDSARLVDAL 112
Query 131 DRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGL 190
V A A++ G L V +QVS+DGD +RGG P D + A++ S L L G+
Sbjct 113 ----VEAAAKN--GVHLDVLIQVSIDGDAARGGC--PVPDLPD-LAARIGRSSELRLRGV 163
Query 191 MGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTALL 250
M + PL P EAF L+ R+R P A +SAGMS DLE A+ GSTCVRVGTALL
Sbjct 164 MAVAPLGRYPGEAFALLKGAVTRLRDDHPDATVISAGMSGDLEDAIAWGSTCVRVGTALL 223
Query 251 GPRRLRSP 258
G R L SP
Sbjct 224 GSRGLTSP 231
>gi|163841224|ref|YP_001625629.1| putative cytoplasmic protein [Renibacterium salmoninarum ATCC
33209]
gi|162954700|gb|ABY24215.1| hypothetical cytosolic protein [Renibacterium salmoninarum ATCC
33209]
Length=246
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/249 (46%), Positives = 149/249 (60%), Gaps = 18/249 (7%)
Query 11 RESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESRE 70
R EL L A++ R+A A A+GR V +L+ +TKF PA DVA+L LG VGE+R+
Sbjct 6 RRRELGANLDAVKQRIAVAVSASGR-VDTPQLIVVTKFHPAADVALLADLGVMEVGENRD 64
Query 71 QEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTAL 130
QEA+AK AEL R A +L HWH +G++Q NKA S+AR+A++ HSVD LV AL
Sbjct 65 QEAAAKQAELAR--AGIDL------HWHFIGQLQTNKAKSVARYAYSVHSVDRPALVQAL 116
Query 131 DRAVVAALAEHRRGERLRVYVQVSLD------GDGSRGGVDSTTPGAVDRICAQVQESEG 184
+AV A LA R L VQV LD G RGG P V I ++ ++
Sbjct 117 AKAVTAELAAGHRSTTLGCLVQVDLDPLELVPGSSPRGG---ARPHEVLAIADEIVAADS 173
Query 185 LELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVR 244
LEL+G+M + PL DPDEAF RL + + P A +SAGMS DL A+KHG+T +R
Sbjct 174 LELLGVMAVTPLGADPDEAFSRLATISAELVNRHPAAKAISAGMSGDLAAAIKHGATHLR 233
Query 245 VGTALLGPR 253
VG+ +LGPR
Sbjct 234 VGSDVLGPR 242
>gi|227504698|ref|ZP_03934747.1| alanine racemase [Corynebacterium striatum ATCC 6940]
gi|227198708|gb|EEI78756.1| alanine racemase [Corynebacterium striatum ATCC 6940]
Length=231
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/244 (46%), Positives = 145/244 (60%), Gaps = 17/244 (6%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
+R+ EL L R+++ A AAGR V + LLP+TKF PA DVA+L LG V E+R
Sbjct 2 NRKEELQAGLERTRAQIEDFARAAGREVPQ--LLPVTKFHPAGDVALLAELGVTDVAENR 59
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
EQEA AK AEL V +HM+G+IQ KA +ARWAH+ HS+DS++L TA
Sbjct 60 EQEARAKAAELP------------AVRFHMIGQIQTKKANHVARWAHSVHSLDSAKLATA 107
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LDR V A R + L V++QVS DGD +RGGV P V + V+E LEL G
Sbjct 108 LDRGVANAQESGDRDDALPVFIQVSADGDTARGGV--ALPD-VPSLVELVEELVNLELQG 164
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
M +PPLD D E F R+++ + V + + +SAGMS DL A+ G+ VRVGT +
Sbjct 165 FMVVPPLDSDAAEVFGRVRTLTDDVARLLGRPLKMSAGMSADLGEAIAAGTDIVRVGTGI 224
Query 250 LGPR 253
+GPR
Sbjct 225 MGPR 228
>gi|331696625|ref|YP_004332864.1| hypothetical protein Psed_2811 [Pseudonocardia dioxanivorans
CB1190]
gi|326951314|gb|AEA25011.1| protein of unknown function UPF0001 [Pseudonocardia dioxanivorans
CB1190]
Length=246
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/248 (47%), Positives = 148/248 (60%), Gaps = 5/248 (2%)
Query 10 DRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITKFFPATDVAILFRLGCRSVGESR 69
DR EL LA +R R+A+A AAGR+ GE+ +L +TK PA DV +L LG R GE+R
Sbjct 3 DRREELARRLAQVRERIASACAAAGRDPGEVAMLAVTKTIPARDVVLLHGLGLRDFGENR 62
Query 70 EQEASAKMAELNRLLAAAELGHSGGVHWHMVGRIQRNKAGSLARWAHTAHSVDSSRLVTA 129
QEA+AK+ E+ LL G + W+ VG +QRNKA +A W SVDS+RL A
Sbjct 63 AQEAAAKVVEVAELLGNPPAGAA--PRWYFVGGLQRNKARLVAPWVTRVESVDSARLADA 120
Query 130 LDRAVVAALAEHRRGERLRVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVG 189
LD A + R L V +Q S+DGD RGGV + + + V GL L G
Sbjct 121 LDAQARRAADDGERDGPLPVLLQYSVDGDPGRGGVARD---GLLTLASHVAGCAGLRLDG 177
Query 190 LMGIPPLDWDPDEAFDRLQSEHNRVRAMFPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
LM + PL DP+EAF + + +RA P A LSAGMS DL+VA++HGSTCVRVGTAL
Sbjct 178 LMAVAPLHADPEEAFADVAAAAEVLRAEHPAATVLSAGMSGDLDVAIRHGSTCVRVGTAL 237
Query 250 LGPRRLRS 257
+G RRL S
Sbjct 238 VGERRLAS 245
Lambda K H
0.319 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 384134341080
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40