BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2159c

Length=344
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|167966687|ref|ZP_02548964.1|  hypothetical protein MtubH3_0089...   677    0.0   
gi|15609296|ref|NP_216675.1|  hypothetical protein Rv2159c [Mycob...   677    0.0   
gi|289574842|ref|ZP_06455069.1|  conserved hypothetical protein [...   675    0.0   
gi|339295076|gb|AEJ47187.1|  hypothetical protein CCDC5079_1997 [...   673    0.0   
gi|289750756|ref|ZP_06510134.1|  conserved hypothetical protein [...   671    0.0   
gi|340627167|ref|YP_004745619.1|  hypothetical protein MCAN_21831...   667    0.0   
gi|289745433|ref|ZP_06504811.1|  conserved hypothetical protein [...   570    1e-160
gi|289762320|ref|ZP_06521698.1|  hypothetical protein TBIG_01557 ...   493    3e-137
gi|254364961|ref|ZP_04981007.1|  conserved hypothetical protein [...   473    2e-131
gi|289754269|ref|ZP_06513647.1|  conserved hypothetical protein [...   444    1e-122
gi|308369638|ref|ZP_07666769.1|  putative alkylhydroperoxidase Ah...   338    6e-91 
gi|308404066|ref|ZP_07493928.2|  putative alkylhydroperoxidase Ah...   334    1e-89 
gi|307084814|ref|ZP_07493927.1|  hypothetical protein TMLG_04182 ...   271    1e-70 
gi|309789506|ref|ZP_07684089.1|  alkylhydroperoxidase like protei...   204    1e-50 
gi|289570276|ref|ZP_06450503.1|  predicted protein [Mycobacterium...   200    3e-49 
gi|194336815|ref|YP_002018609.1|  alkylhydroperoxidase-like prote...   185    1e-44 
gi|189499273|ref|YP_001958743.1|  alkylhydroperoxidase like prote...   179    6e-43 
gi|271968238|ref|YP_003342434.1|  hypothetical protein Sros_6991 ...   160    2e-37 
gi|119356676|ref|YP_911320.1|  alkylhydroperoxidase [Chlorobium p...   157    2e-36 
gi|182434405|ref|YP_001822124.1|  hypothetical protein SGR_612 [S...   154    2e-35 
gi|159036212|ref|YP_001535465.1|  alkylhydroperoxidase [Salinispo...   154    3e-35 
gi|326774918|ref|ZP_08234183.1|  alkylhydroperoxidase like protei...   154    3e-35 
gi|318056458|ref|ZP_07975181.1|  hypothetical protein SSA3_00842 ...   145    1e-32 
gi|256394159|ref|YP_003115723.1|  alkylhydroperoxidase like prote...   143    3e-32 
gi|333026773|ref|ZP_08454837.1|  putative alkylhydroperoxidase [S...   143    5e-32 
gi|320007552|gb|ADW02402.1|  alkylhydroperoxidase like protein, A...   142    7e-32 
gi|21224727|ref|NP_630506.1|  DNA-binding protein [Streptomyces c...   142    1e-31 
gi|302519396|ref|ZP_07271738.1|  alkylhydroperoxidase [Streptomyc...   142    1e-31 
gi|289767996|ref|ZP_06527374.1|  DNA-binding protein [Streptomyce...   141    1e-31 
gi|238059244|ref|ZP_04603953.1|  hypothetical protein MCAG_00210 ...   139    6e-31 
gi|330467645|ref|YP_004405388.1|  hypothetical protein VAB18032_1...   137    4e-30 
gi|297203476|ref|ZP_06920873.1|  DNA-binding protein [Streptomyce...   136    4e-30 
gi|291442619|ref|ZP_06582009.1|  conserved hypothetical protein [...   133    4e-29 
gi|193211995|ref|YP_001997948.1|  alkylhydroperoxidase like prote...   132    7e-29 
gi|24575115|gb|AAL06686.1|  unknown [Streptomyces globisporus]         132    7e-29 
gi|300788698|ref|YP_003768989.1|  hypothetical protein AMED_6866 ...   132    9e-29 
gi|254392929|ref|ZP_05008096.1|  conserved hypothetical protein [...   131    1e-28 
gi|326446979|ref|ZP_08221713.1|  hypothetical protein SclaA2_3818...   131    2e-28 
gi|340530314|gb|AEK45519.1|  hypothetical protein RAM_35230 [Amyc...   130    3e-28 
gi|145595228|ref|YP_001159525.1|  alkylhydroperoxidase [Salinispo...   129    7e-28 
gi|256378145|ref|YP_003101805.1|  hypothetical protein Amir_4103 ...   124    2e-26 
gi|28192470|gb|AAM77983.1|  unknown [Streptomyces carzinostaticus...   124    3e-26 
gi|159036215|ref|YP_001535468.1|  carboxymuconolactone decarboxyl...   112    9e-23 
gi|164665139|gb|ABY66000.1|  unknown [Actinomadura madurae]            109    7e-22 
gi|318081582|ref|ZP_07988897.1|  alkylhydroperoxidase [Streptomyc...   105    8e-21 
gi|110598858|ref|ZP_01387111.1|  putative DNA-binding protein [Ch...   100    3e-19 
gi|254385215|ref|ZP_05000546.1|  conserved hypothetical protein [...  89.0    1e-15 
gi|297190934|ref|ZP_06908332.1|  predicted protein [Streptomyces ...  80.1    5e-13 
gi|291303339|ref|YP_003514617.1|  hypothetical protein Snas_5896 ...  78.6    2e-12 
gi|110598820|ref|ZP_01387078.1|  conserved hypothetical protein [...  77.8    3e-12 


>gi|167966687|ref|ZP_02548964.1| hypothetical protein MtubH3_00893 [Mycobacterium tuberculosis 
H37Ra]
Length=429

 Score =  677 bits (1748),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  86   MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  145

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  146  GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  205

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  206  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  265

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  266  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  325

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  326  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  385

Query  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344
            RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG
Sbjct  386  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  429


>gi|15609296|ref|NP_216675.1| hypothetical protein Rv2159c [Mycobacterium tuberculosis H37Rv]
 gi|15841651|ref|NP_336688.1| hypothetical protein MT2218 [Mycobacterium tuberculosis CDC1551]
 gi|31793339|ref|NP_855832.1| hypothetical protein Mb2183c [Mycobacterium bovis AF2122/97]
 54 more sequence titles
 Length=344

 Score =  677 bits (1746),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300

Query  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344
            RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG
Sbjct  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344


>gi|289574842|ref|ZP_06455069.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289539273|gb|EFD43851.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=344

 Score =  675 bits (1741),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 343/344 (99%), Positives = 343/344 (99%), Gaps = 0/344 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGT VQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTVVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300

Query  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344
            RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG
Sbjct  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344


>gi|339295076|gb|AEJ47187.1| hypothetical protein CCDC5079_1997 [Mycobacterium tuberculosis 
CCDC5079]
Length=344

 Score =  673 bits (1737),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 343/344 (99%), Positives = 343/344 (99%), Gaps = 0/344 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGR TRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRPTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300

Query  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344
            RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG
Sbjct  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344


>gi|289750756|ref|ZP_06510134.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289691343|gb|EFD58772.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=367

 Score =  671 bits (1730),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 341/342 (99%), Positives = 341/342 (99%), Gaps = 0/342 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300

Query  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNP  342
            RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQ P
Sbjct  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQKP  342


>gi|340627167|ref|YP_004745619.1| hypothetical protein MCAN_21831 [Mycobacterium canettii CIPT 
140010059]
 gi|340005357|emb|CCC44515.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=344

 Score =  667 bits (1720),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 340/344 (99%), Positives = 340/344 (99%), Gaps = 0/344 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MK VNHIEPVA RRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKLVNHIEPVAARRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300

Query  301  RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344
            R LLDTDAALVGALAWAAFTAARRIGTWIGA AEGQVSRQNPTG
Sbjct  301  RPLLDTDAALVGALAWAAFTAARRIGTWIGAGAEGQVSRQNPTG  344


>gi|289745433|ref|ZP_06504811.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289685961|gb|EFD53449.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=345

 Score =  570 bits (1469),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 319/344 (93%), Positives = 321/344 (94%), Gaps = 3/344 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300
            TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA
Sbjct  241  TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA  300

Query  301  RSLLDTDAALVGALAW--AAFTAARRIGTWIGAAAEGQVSRQNP  342
            RSLLDT     G   W   +FTAAR         AE + SRQ P
Sbjct  301  RSLLDTRCG-AGLAPWPGPSFTAARASPPGSAPPAEAKGSRQKP  343


>gi|289762320|ref|ZP_06521698.1| hypothetical protein TBIG_01557 [Mycobacterium tuberculosis GM 
1503]
 gi|289709826|gb|EFD73842.1| hypothetical protein TBIG_01557 [Mycobacterium tuberculosis GM 
1503]
Length=250

 Score =  493 bits (1268),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVG  250
            TRQVVRRVVG
Sbjct  241  TRQVVRRVVG  250


>gi|254364961|ref|ZP_04981007.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134150475|gb|EBA42520.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=344

 Score =  473 bits (1218),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 260/261 (99%), Positives = 261/261 (100%), Gaps = 0/261 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWHGEPMPMSS  261
            TRQVVR+VVGSWHGEPMPMSS
Sbjct  241  TRQVVRQVVGSWHGEPMPMSS  261


>gi|289754269|ref|ZP_06513647.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289694856|gb|EFD62285.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=258

 Score =  444 bits (1142),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 247/253 (98%), Positives = 247/253 (98%), Gaps = 3/253 (1%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240
            GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP
Sbjct  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP  240

Query  241  TRQVVRRVVGSWH  253
            TRQV     GSW 
Sbjct  241  TRQVSG---GSWE  250


>gi|308369638|ref|ZP_07666769.1| putative alkylhydroperoxidase AhpD family core domain protein 
[Mycobacterium tuberculosis SUMu002]
 gi|308326920|gb|EFP15771.1| putative alkylhydroperoxidase AhpD family core domain protein 
[Mycobacterium tuberculosis SUMu002]
Length=360

 Score =  338 bits (868),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 171/171 (100%), Positives = 171/171 (100%), Gaps = 0/171 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGP  171
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGP
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGP  171


>gi|308404066|ref|ZP_07493928.2| putative alkylhydroperoxidase AhpD family core domain protein 
[Mycobacterium tuberculosis SUMu012]
 gi|308365613|gb|EFP54464.1| putative alkylhydroperoxidase AhpD family core domain protein 
[Mycobacterium tuberculosis SUMu012]
Length=206

 Score =  334 bits (856),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV
Sbjct  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV
Sbjct  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120

Query  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPG  169
            AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPG
Sbjct  121  AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPG  169


>gi|307084814|ref|ZP_07493927.1| hypothetical protein TMLG_04182 [Mycobacterium tuberculosis SUMu012]
 gi|308365617|gb|EFP54468.1| hypothetical protein TMLG_04182 [Mycobacterium tuberculosis SUMu012]
Length=137

 Score =  271 bits (693),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  208  PDDLAWATPSEPIATAFAALSHHLDTAPHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEH  267
            PDDLAWATPSEPIATAFAALSHHLDTAPHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEH
Sbjct  1    PDDLAWATPSEPIATAFAALSHHLDTAPHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEH  60

Query  268  TAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGT  327
            TAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGT
Sbjct  61   TAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGT  120

Query  328  WIGAAAEGQVSRQNPTG  344
            WIGAAAEGQVSRQNPTG
Sbjct  121  WIGAAAEGQVSRQNPTG  137


>gi|309789506|ref|ZP_07684089.1| alkylhydroperoxidase like protein, AhpD family [Oscillochloris 
trichoides DG6]
 gi|308228472|gb|EFO82117.1| alkylhydroperoxidase like protein, AhpD family [Oscillochloris 
trichoides DG6]
Length=333

 Score =  204 bits (520),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 132/316 (42%), Positives = 177/316 (57%), Gaps = 7/316 (2%)

Query  22   VYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRGRKEAVAAAVAASLRC  81
            + A+ R +FG L +P  + +P   LL   W   RE+ LVG+VPR +KE VA +V+   RC
Sbjct  17   LVAQIRHDFGALVDPFRLHAPHPDLLAGVWMACRESELVGRVPRMQKEVVAVSVSHLNRC  76

Query  82   PWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAP-YVAWAAGTGTPAGPPA---PFG  137
             +CVDAHT ML+A  Q   A ++ AG       P+    VAWA  T TP        PF 
Sbjct  77   AYCVDAHTVMLHALTQHWVARSVHAGGEQRKLAPDLQRLVAWAEATSTPGASILRTPPFA  136

Query  138  PDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQL-MRRAGGLVFARKVRAEHRPG  196
                 E +GTAV +H+I R+V VLLD + LP  P        R  G  F R  R   +PG
Sbjct  137  LAEGPEIIGTAVFYHYINRMVAVLLDPSPLPSLPTLFDAGSARFAGFWFRRAARRMKQPG  196

Query  197  RSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDT--APHLPPPTRQVVRRVVGSWHG  254
             + + L    LP D+AWA P+  IA AFA  +  +D   A  LP P R+V +R + +W+G
Sbjct  197  LALQFLPKAELPPDMAWAKPNPIIAAAFARWATVVDHVGAQVLPAPVREVTQRSLAAWNG  256

Query  255  EPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGAL  314
             P P+   W     AELPA  HA  RL +LT +AP++V    VAA +S+L  D AL+GAL
Sbjct  257  APPPLGQAWLTPILAELPAVHHAVARLVILTAMAPYRVDAATVAAFQSVLAGDEALLGAL  316

Query  315  AWAAFTAARRIGTWIG  330
            AWA+F AARR+G+W+ 
Sbjct  317  AWASFMAARRVGSWLS  332


>gi|289570276|ref|ZP_06450503.1| predicted protein [Mycobacterium tuberculosis T17]
 gi|289544030|gb|EFD47678.1| predicted protein [Mycobacterium tuberculosis T17]
Length=101

 Score =  200 bits (508),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 100/101 (99%), Positives = 101/101 (100%), Gaps = 0/101 (0%)

Query  244  VVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSL  303
            +VRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSL
Sbjct  1    MVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSL  60

Query  304  LDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  344
            LDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG
Sbjct  61   LDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG  101


>gi|194336815|ref|YP_002018609.1| alkylhydroperoxidase-like protein [Pelodictyon phaeoclathratiforme 
BU-1]
 gi|194309292|gb|ACF43992.1| alkylhydroperoxidase like protein, AhpD family [Pelodictyon phaeoclathratiforme 
BU-1]
Length=335

 Score =  185 bits (469),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 123/335 (37%), Positives = 168/335 (51%), Gaps = 11/335 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQV  63
            + + E +    A     +V A+ RREFG   EP  +  P   LL   W   RETLL G  
Sbjct  3    IKYFESLPRASAESLSGKVLAQVRREFGAEVEPFTLHLPVAELLAGVWMACRETLLAGSG  62

Query  64   PRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-PYVAW  122
             R  KE VAA+V+A  RCP+CVDAH+ ML  +   D +  I  G      D       AW
Sbjct  63   RRDAKEVVAASVSALNRCPFCVDAHSIMLLESSGNDYSNLITGGKTELIDDLFLRETAAW  122

Query  123  AAGTGTPAGP---PAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLP---GGPRAQQL  176
            A+ T  P  P     PF  + A  ++GTAV FH+I R+V +LL  + LP   G P+  ++
Sbjct  123  ASATRCPGSPVLQKPPFTAEEAPAFIGTAVLFHYINRMVTILLGPSPLPFTSGFPK--KV  180

Query  177  MRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLD--TA  234
              +     F   +R    PG S   L    LPDDL WA PS+PIA AFA  +  ++   A
Sbjct  181  SMQMAAWFFGGAIRRPKEPGTSLDLLAEAPLPDDLFWAQPSKPIAGAFARFAQVVEHSGA  240

Query  235  PHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTD  294
              L    R+ V + V  W+G    M++ W  E  + L        RLAL T LAP++V  
Sbjct  241  MTLSAEVRRAVNKAVEKWNGSDPGMNNGWCEEALSALEVTDKTAGRLALFTALAPYRVDA  300

Query  295  DDVAAARSLLDTDAALVGALAWAAFTAARRIGTWI  329
              V A  +    D  L+ ALAW++FTAAR++G+W+
Sbjct  301  SIVHAFSASFPGDDRLLSALAWSSFTAARKVGSWL  335


>gi|189499273|ref|YP_001958743.1| alkylhydroperoxidase like protein [Chlorobium phaeobacteroides 
BS1]
 gi|189494714|gb|ACE03262.1| alkylhydroperoxidase like protein, AhpD family [Chlorobium phaeobacteroides 
BS1]
Length=336

 Score =  179 bits (454),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 125/308 (41%), Positives = 157/308 (51%), Gaps = 7/308 (2%)

Query  29   EFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRGRKEAVAAAVAASLRCPWCVDAH  88
            EFG   EP  +  P   LL   W   RE+LLVG V R  KEAVA  V+   RCP+CVDAH
Sbjct  28   EFGARVEPFTLHLPQPELLAGVWMICRESLLVGSVRRDLKEAVATTVSVINRCPYCVDAH  87

Query  89   TTMLYAAGQTDTAAAILAGTAPAAGDPNA-PYVAWAAGTGTPAGPPA---PFGPDVAAEY  144
              M+  A     A AI AGT  A  D +    V WAA T  P        PF PD A EY
Sbjct  88   GIMILGASGKSYAEAITAGTYDAIDDKDVRKAVEWAAATLLPGSSILADPPFSPDEAPEY  147

Query  145  LGTAVQFHFIARLVLVLLDETFLPGGPRA-QQLMRRAGGLVFARKVRAEHRPGRSTRRLE  203
            +GTAV FH+I R+V +LL  T LP G  A +++  R     F R +R    P  S   L 
Sbjct  148  IGTAVCFHYINRMVTILLGPTPLPFGKGALKRVSMRLASWFFGRSIRVYKEPCASLELLP  207

Query  204  PRTLPDDLAWATPSEPIATAFAALSHHLDTAPH--LPPPTRQVVRRVVGSWHGEPMPMSS  261
              TLP DL WA+ S  IA A+AA S  ++ A    L    R+ + +VV +W+G+   M  
Sbjct  208  RATLPGDLGWASASACIAHAYAAFSGTVERAGEKVLTEQVRESISKVVKAWNGKDPGMGR  267

Query  262  RWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTA  321
             W  E          A   LALL  LAP+ VT  +V++  +    D  L+  LAW +FTA
Sbjct  268  AWIEESLGACTGGQRAAGELALLAALAPYLVTPAEVSSFSAYYPGDRELLAVLAWGSFTA  327

Query  322  ARRIGTWI  329
            ARR G W+
Sbjct  328  ARRAGGWM  335


>gi|271968238|ref|YP_003342434.1| hypothetical protein Sros_6991 [Streptosporangium roseum DSM 
43021]
 gi|270511413|gb|ACZ89691.1| hypothetical protein Sros_6991 [Streptosporangium roseum DSM 
43021]
Length=374

 Score =  160 bits (406),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 129/340 (38%), Positives = 169/340 (50%), Gaps = 13/340 (3%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            +  V H+ PV P  A   VA VY +A R+FG L  P+ + SP    L A W  LRE+LL 
Sbjct  14   LSQVRHVSPVRPGAAREIVAGVYEQAERDFGMLAPPVILHSPAPEPLAACWLILRESLLA  73

Query  61   -GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPY  119
             G V R  KEAVAAAV+    CP+CVD H+  L +  + D AA I      A  DP    
Sbjct  74   HGTVNRAIKEAVAAAVSLGNTCPYCVDVHSATLGSLVRGDYAAEIAGDRIEAIADPGVRR  133

Query  120  VA-WAAGTGT---PAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDET----FLPGGP  171
            +A WA  +GT    A    P   +  AE +G AV F +  R+V V LDE+     +P G 
Sbjct  134  IAAWARASGTREAAARHDLPLPAEQVAELVGVAVTFQYFNRMVNVFLDESPVPPQVPAGV  193

Query  172  RAQQLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHL  231
            R    + R  GL      R  H PG S   L     P DL+WA  +  IA AFA  +  +
Sbjct  194  RPG--LMRLLGLFMRPAARRAHAPGASLDLLPAAPPPADLSWADGAANIAEAFARAAAAV  251

Query  232  DTAPH--LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAP  289
            D A H  +P P R +V   +  W+G P  +S  W  +  + LPA      RLALLT +A 
Sbjct  252  DRAGHRSVPEPVRDLVTAELAGWNGAPAGLSRSWVTDAVSGLPAAQRPAGRLALLTAMAS  311

Query  290  HQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGTWI  329
            +QV    +   R     D AL+   +WA+  AARRIG+W+
Sbjct  312  YQVDQPVIDEFRRTEPGDRALIELTSWASLAAARRIGSWV  351


>gi|119356676|ref|YP_911320.1| alkylhydroperoxidase [Chlorobium phaeobacteroides DSM 266]
 gi|119354025|gb|ABL64896.1| alkylhydroperoxidase like protein, AhpD family [Chlorobium phaeobacteroides 
DSM 266]
Length=336

 Score =  157 bits (398),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 113/333 (34%), Positives = 156/333 (47%), Gaps = 7/333 (2%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQV  63
            +N+     P         V A+ R+EFG   EP  +  P   LL   W   RETL+ G  
Sbjct  3    INYFTETHPAYRDKLTILVMAQVRKEFGAEVEPFLLHKPIPELLAGSWMACRETLISGIA  62

Query  64   PRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA-W  122
             R  KE VAA  +   RCP+CVDAHT M   A   D    I +G      DP    +A W
Sbjct  63   NREAKEVVAAVTSMMNRCPYCVDAHTVMALGASGRDYTGTIASGRYETIRDPFMRSMAEW  122

Query  123  AAGTGTPAGPPA---PFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGP-RAQQLMR  178
             + T +P  P     PF PD A EY+GT + F++I R+  +LL  + LP      + +  
Sbjct  123  GSATRSPDSPVLRYPPFNPDEAPEYIGTVLFFNYINRMATILLGASPLPFTDGIMKNISM  182

Query  179  RAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH--  236
            R     F+  +    +PG S   L    LPDDLAWA PS  ++ A A  S  ++ A    
Sbjct  183  RLAAFFFSSAIHRTKQPGTSLDLLPNEPLPDDLAWAKPSPFVSGALARFSAAIEKAAETV  242

Query  237  LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDD  296
            L   T  +V   +  W G    +SS W       L        RLALLT +AP Q++++ 
Sbjct  243  LTEKTAGMVIDQLDRWDGSDPGISSSWCEHLLFRLNDSEKTVARLALLTAIAPWQISNEM  302

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRIGTWI  329
            V A  +    D AL+  L+W++ +AARRI  W+
Sbjct  303  VRAFSAYHSGDKALLSILSWSSLSAARRISRWL  335


>gi|182434405|ref|YP_001822124.1| hypothetical protein SGR_612 [Streptomyces griseus subsp. griseus 
NBRC 13350]
 gi|178462921|dbj|BAG17441.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus 
NBRC 13350]
Length=345

 Score =  154 bits (388),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 124/337 (37%), Positives = 158/337 (47%), Gaps = 27/337 (8%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            ++ V +++ +AP RA G VA+VY    R+FG L  P+A+ SP    L A W  LRE LLV
Sbjct  13   LRQVRYVDVIAPHRARGLVAQVYRATERDFGVLAPPVALHSPAAASLAATWLMLREVLLV  72

Query  61   -GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPY  119
             G+V R  KE VA AV+ +  CP+CV  H  +L              GT P      +P 
Sbjct  73   DGRVSRAVKETVATAVSRANDCPYCVHVHQAVL--------------GTLPP-DRTVSPV  117

Query  120  VAWAAGTG-----TPAGP-PAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPG---G  170
              WAA  G      PAG  P PF      E  G  V FH+I R+V V L ++ +P     
Sbjct  118  AEWAAAAGRRHPGDPAGSAPPPFTEAQLPELCGVVVTFHYINRMVSVFLADSPMPALTPA  177

Query  171  PRAQQLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHH  230
            P    +MR    L           PG S   L    LP  L WA  S P+A AF      
Sbjct  178  PLRAPIMR-TTALAMRPVTPGPMAPGASLDLLPAAPLPPGLEWALGSPPVAEAFGRAFAA  236

Query  231  LDT-APHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAP  289
            +D  A  +P P R+ +R  +  W G    +   W +E  + LPA+     RL LLT  AP
Sbjct  237  VDQGARWVPKPVRERLRSRLDRWDGSAPGLGRAWLDEAVSALPAEDVPAARLVLLTAFAP  296

Query  290  HQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIG  326
            HQ   +DVAA R    TD  LV   +WAA T A RIG
Sbjct  297  HQTLPEDVAAFRVRFPTDRELVELTSWAALTTAVRIG  333


>gi|159036212|ref|YP_001535465.1| alkylhydroperoxidase [Salinispora arenicola CNS-205]
 gi|157915047|gb|ABV96474.1| alkylhydroperoxidase like protein, AhpD family [Salinispora arenicola 
CNS-205]
Length=369

 Score =  154 bits (388),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 124/330 (38%), Positives = 161/330 (49%), Gaps = 6/330 (1%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-GQ  62
            V H+ PV  R A G VA+VY +  R+FG +  P+A+ +P   +L+A W  LRE LLV G+
Sbjct  17   VRHVHPVLHRDAQGLVAKVYDQMERDFGMIAPPVALHAPAPTVLSASWVLLREILLVDGR  76

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-PYVA  121
            V R  KEAVAAAV+   RCP+CVD H+T        D A A+ A       DP     V 
Sbjct  77   VDRATKEAVAAAVSLGNRCPYCVDVHSTTFLGLVGGDEAQAVAADRIDTIADPRLRELVR  136

Query  122  WAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLP-GGPRAQQLMRRA  180
            W   +G    P  PF P  A E +GTAV FH   R+V + L E+ LP    R +  +RR 
Sbjct  137  WGRLSGGAERPAPPFTPAEAPELIGTAVAFHHFNRMVNIFLQESPLPPVRGRVRGAVRRG  196

Query  181  GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDT--APHLP  238
               +  R       PG S   L P   P  L WA     IA A       ++   A  +P
Sbjct  197  AAGIMGRLAGGGTGPGGSLDLLPPAVSPPGLEWAAGQPHIAEAARRALAAVEDSAARSVP  256

Query  239  PPTRQVVRRVVGSWHGEPMPMSSR-WTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDV  297
               RQ+V   + +         +R W  E TA LP +     RLALLT  A +QVTD  V
Sbjct  257  EQVRQLVTDRLATGPPPGPGPVNRPWLAEVTAGLPDEHRPAARLALLTAFASYQVTDAVV  316

Query  298  AAARSLLDTDAALVGALAWAAFTAARRIGT  327
            A  R+    D  L+    WAA +AAR++GT
Sbjct  317  AECRARGQDDTELITLTGWAALSAARQVGT  346


>gi|326774918|ref|ZP_08234183.1| alkylhydroperoxidase like protein, AhpD family [Streptomyces 
cf. griseus XylebKG-1]
 gi|326655251|gb|EGE40097.1| alkylhydroperoxidase like protein, AhpD family [Streptomyces 
griseus XylebKG-1]
Length=345

 Score =  154 bits (388),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 124/337 (37%), Positives = 158/337 (47%), Gaps = 27/337 (8%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            ++ V +++ +AP RA G VA+VY    R+FG L  P+A+ SP    L A W  LRE LLV
Sbjct  13   LRQVRYVDVIAPHRARGLVAQVYRATERDFGVLAPPVALHSPAAASLAATWLMLREVLLV  72

Query  61   -GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPY  119
             G+V R  KE VA AV+ +  CP+CV  H  +L              GT P      +P 
Sbjct  73   DGRVSRAVKETVATAVSRANDCPYCVHVHQAVL--------------GTLPP-DRTVSPV  117

Query  120  VAWAAGTG-----TPAGP-PAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPG---G  170
              WAA  G      PAG  P PF      E  G  V FH+I R+V V L ++ +P     
Sbjct  118  AEWAAAAGRHHPGDPAGSAPPPFTEAQLPELCGVVVTFHYINRMVSVFLADSPMPALTPA  177

Query  171  PRAQQLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHH  230
            P    +MR    L           PG S   L    LP  L WA  S P+A AF      
Sbjct  178  PLRAPIMR-TTALAMRPVAPGPMAPGASLDLLPAAPLPPGLEWALGSPPVAEAFGRAFAA  236

Query  231  LDT-APHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAP  289
            +D  A  +P P R+ +R  +  W G    +   W +E  + LPA+     RL LLT  AP
Sbjct  237  VDQGARWVPKPVRERLRSRLDRWDGSAPGLGRAWLDEAVSALPAEDVPAARLVLLTAFAP  296

Query  290  HQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIG  326
            HQ   +DVAA R    TD  LV   +WAA T A RIG
Sbjct  297  HQTLPEDVAAFRVRFPTDRELVELTSWAALTTAVRIG  333


>gi|318056458|ref|ZP_07975181.1| hypothetical protein SSA3_00842 [Streptomyces sp. SA3_actG]
Length=454

 Score =  145 bits (365),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 121/339 (36%), Positives = 164/339 (49%), Gaps = 12/339 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLL-VGQ  62
            + +  P+AP  A G  A V+ E  R+FG L  P+A+ +P   LL A W  LRETLL  GQ
Sbjct  17   IRYFAPLAPADARGLAAVVHEETERDFGMLAPPVALHTPSPPLLAATWIMLRETLLATGQ  76

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
            + RG KEA+A+AV+ +  CP+CV  H T L+A      +AA+  G A +  DP    +A 
Sbjct  77   MTRGDKEAIASAVSQANSCPYCVQVHGTALHALLPGPDSAALAGGAADSVADPRLRALAR  136

Query  123  AAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRAGG  182
             A TG     PAP  P    E +GTA  FH++ R+V + L    +P    A   +RR   
Sbjct  137  WAATGR---GPAPLDPGHLPEAIGTAATFHYLNRMVNIFLGPPPIPAD--APAAVRRVAT  191

Query  183  LVFARKVRA----EHRPGRSTRRLEPRTLPDDLAWA--TPSEPIATAFAALSHHLDTAPH  236
            L+  R +R        PGRS   L    LP DL WA  TP+   A A AA +      P 
Sbjct  192  LLMGRTLRQHALRHQEPGRSLDLLPSAPLPPDLHWARRTPTVAGAFARAAAAIDAPATPA  251

Query  237  LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDD  296
            L P  R ++   +  W G P  +++ W +   AEL        RL LLT  A ++V +  
Sbjct  252  LTPSIRALLHERLAVWDGTPPGLATTWLDTALAELSPQDRPAGRLVLLTAFASYRVAEPA  311

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEG  335
            V     L  T   L+   +WAAFT AR   T +     G
Sbjct  312  VLPFLRLGRTPDDLLALTSWAAFTTARHAATRLTDGETG  350


>gi|256394159|ref|YP_003115723.1| alkylhydroperoxidase like protein, AhpD family [Catenulispora 
acidiphila DSM 44928]
 gi|256360385|gb|ACU73882.1| alkylhydroperoxidase like protein, AhpD family [Catenulispora 
acidiphila DSM 44928]
Length=388

 Score =  143 bits (361),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 125/339 (37%), Positives = 161/339 (48%), Gaps = 25/339 (7%)

Query  4    VNHIEPVAPRRAG--GAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-  60
            V H+ PV  RR G    VA +Y E  R FG +  P+ + SP   LL A W  + ETLLV 
Sbjct  45   VRHVSPV--RRGGVDARVAVIYGEMERLFGLISPPVVLHSPVPDLLAATWMMMSETLLVE  102

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV  120
            G V R  KEAVA AV+    CP+CV  H TML + G    A A+         DP    V
Sbjct  103  GAVDRRVKEAVATAVSVGNECPYCVTIHGTMLRSLGHDADATALADDRVIDVADPEVRAV  162

Query  121  -AWAAGTGTPAGPPA-----PFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQ  174
             AW   +   AG        PF P+ AAE LG  + FH+  R+V       FLP  P   
Sbjct  163  SAWVRASANAAGAAGDEVEPPFPPEQAAEILGVVLVFHYFNRMV-----NVFLPDAPLPP  217

Query  175  QLMRRAGGLVF---ARKVRAEHR---PGRSTRRLEPRT-LPDDLAWATPSEPIATAFAAL  227
                    +V     R +R+ HR   P   T +L P   LP DLAWAT +  I+ A +  
Sbjct  218  LAPAAVLTVVLPVLGRFLRSAHRNTAPVGGTLKLLPEAPLPTDLAWATDNRTISDALSRA  277

Query  228  SHHLDTAPH--LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLT  285
            +   + A    +P   R +VR  + +W G+P  MS  W  E   +LP       RLALL 
Sbjct  278  TAAYEQAGQRAVPAAVRDLVRAELAAWDGQPKGMSRAWVEEAIRDLPTADQPAGRLALLI  337

Query  286  GLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARR  324
             LA +QV +  + A R+    DA LV   +WA+FTAA R
Sbjct  338  ALASYQVDEGALGAFRATAPGDATLVELASWASFTAAVR  376


>gi|333026773|ref|ZP_08454837.1| putative alkylhydroperoxidase [Streptomyces sp. Tu6071]
 gi|332746625|gb|EGJ77066.1| putative alkylhydroperoxidase [Streptomyces sp. Tu6071]
Length=435

 Score =  143 bits (360),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 118/333 (36%), Positives = 162/333 (49%), Gaps = 12/333 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLL-VGQ  62
            + +  P+AP  A G  A V+ E  R+FG L  P+A+ +P   LL A W  LRETLL  G+
Sbjct  8    IRYFAPLAPADARGLAAVVHEETERDFGMLAPPVALHTPSPPLLAATWIMLRETLLATGR  67

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
            + RG KEA+A+AV+ +  CP+CV  H T L+A      +AA+  G A +  DP    +A 
Sbjct  68   MTRGDKEAIASAVSQANSCPYCVQVHGTALHALLPGPDSAALAGGAADSVADPRLRALAR  127

Query  123  AAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRAGG  182
             A TG     PAP  P    E +GTA  FH++ R+V + L    +     A   +RR   
Sbjct  128  WAATGR---EPAPLDPGHLPEAIGTAATFHYLNRMVNIFLGPPPI--PADAPAAVRRVAT  182

Query  183  LVFARKVRA----EHRPGRSTRRLEPRTLPDDLAWA--TPSEPIATAFAALSHHLDTAPH  236
            L+  R +R        PGRS   L    LP DL WA  TP+   A A AA +      P 
Sbjct  183  LLMGRTLRQHALRHQEPGRSLDLLPSAPLPPDLHWARRTPTVAGAFARAAAAIDAPATPA  242

Query  237  LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDD  296
            L P  R ++   +  W G P  +++ W +   AEL        RL LLT  A ++V +  
Sbjct  243  LTPSVRALLHERLAVWDGTPPGLATTWLDTALAELSPQDRPAGRLVLLTAFASYRVAEPA  302

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRIGTWI  329
            V     L  T   L+   +WAAFT AR   T +
Sbjct  303  VLPFLRLGRTPDDLLALTSWAAFTTARHAATRL  335


>gi|320007552|gb|ADW02402.1| alkylhydroperoxidase like protein, AhpD family [Streptomyces 
flavogriseus ATCC 33331]
Length=326

 Score =  142 bits (358),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 129/329 (40%), Positives = 164/329 (50%), Gaps = 30/329 (9%)

Query  6    HIEPVAPRRAGGAVAEVYAEARREFG-RLPEPLAMLSPDEGLLTAGWATLRETLLVGQVP  64
            +  P  P+ A G VA+VY +   +FG R      +LS    LLTA WA +RE+LL G+  
Sbjct  7    YTSPEPPQSATGEVADVYTQLAADFGIRNASTFVVLSASPPLLTATWALMRESLLAGRAS  66

Query  65   RGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-PYVAWA  123
            R  KE VAA V+ + RCP+C  AH  +L+A G    A  +L G  P   DP     +AW 
Sbjct  67   RTGKELVAAGVSLANRCPFCATAHAVLLHATGDHRLAETVLRGDEPE--DPGERGLLAWG  124

Query  124  AGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRAGGL  183
                  +GPP PF    A EY+GTA+ FHFI R+V  LL E  LPGG    +L+R   G 
Sbjct  125  KDM---SGPP-PFPAHEADEYVGTALAFHFINRVVSSLLSEQMLPGGVEKYRLVRSTAGR  180

Query  184  VFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH-----LP  238
              A  VR +  PG S   L   T  +  AWA    P+ TA+ AL     TA H     L 
Sbjct  181  SLAATVRRDLTPGTSLPLLG--TAGEPPAWAAEG-PVGTAYGALR----TAAHQGAGLLS  233

Query  239  PPTRQVVRRVVGSWHG-EPMPMSSRWTNEHTAELPADLHAP-TRLALLTGLAPHQVTDDD  296
                  VR  V  W G  P+P+S        A LP     P  RLALL   AP+++TD+D
Sbjct  234  TRDAAFVRESVAGWDGVTPLPLS--------APLPERADRPGARLALLAARAPYRITDED  285

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRI  325
            VAA R    TD  LV  +A+ A  A  R+
Sbjct  286  VAAWRVPPSTDHCLVHLVAFGAILAVERV  314


>gi|21224727|ref|NP_630506.1| DNA-binding protein [Streptomyces coelicolor A3(2)]
 gi|3127841|emb|CAA18907.1| putative DNA-binding protein [Streptomyces coelicolor A3(2)]
Length=337

 Score =  142 bits (357),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 132/341 (39%), Positives = 170/341 (50%), Gaps = 32/341 (9%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFG-RLPEPLAMLSPDEGLLTAGWATLRETLLVGQ  62
              H EP+ P+ A G VAEVYA+A R+FG   P P   LS    L+   WA +RE+LL G 
Sbjct  5    FRHTEPLPPKAATGRVAEVYAQAARDFGISEPAPFVALSSAPALVAPAWALMRESLLAGP  64

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
              R  KE  A  V+ + +C +CVDAHT +L+A G    A  +  G  P A + +A  + W
Sbjct  65   GDRTGKEVAAFGVSQANKCRFCVDAHTMLLHATGDHALAERLAGGLEP-ADERHARVLDW  123

Query  123  AAGTGTP--AGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            A  T  P  A  P PF P+ A  YLGT + FHFI R+V  L+ ET LP G +  + +R  
Sbjct  124  ARRTRVPGAAREPHPFPPEEAPGYLGTVLAFHFINRVVSSLVTETLLPAGAQRLRPVRSL  183

Query  181  GGLVFARKVRAEHRPGRSTRRL-EPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH---  236
             G   +R VR    PG S   L +P   P   AWA    P+  A+AALS     AP    
Sbjct  184  AGRSLSRTVRRTAVPGASLPLLDDPGRGP---AWAA-GTPVGPAYAALS---SAAPMGAG  236

Query  237  -LPPPTRQVVRRVVGSWHGE-----PMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPH  290
             L    + +VR  +  W G      P P   R       E P       RLALL  LAP+
Sbjct  237  LLDADDQDLVRATLRDWDGSHPPRTPDPFPDR------RERPG-----ARLALLVALAPY  285

Query  291  QVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGTWIGA  331
            ++TD DVAA R    TD  LV  +A+ AF A  R+ T + A
Sbjct  286  RITDADVAAWRRPEHTDHCLVHLVAYGAFAAVDRVETALTA  326


>gi|302519396|ref|ZP_07271738.1| alkylhydroperoxidase [Streptomyces sp. SPB78]
 gi|302428291|gb|EFL00107.1| alkylhydroperoxidase [Streptomyces sp. SPB78]
Length=451

 Score =  142 bits (357),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 120/339 (36%), Positives = 163/339 (49%), Gaps = 12/339 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLL-VGQ  62
            + +  P+AP  A G  A V+ E  R+FG L  P+A+ +P   LL A W  LRETLL  GQ
Sbjct  12   IRYFAPLAPADARGLAAVVHEETERDFGMLAPPVALHTPSPPLLAATWIMLRETLLATGQ  71

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
            + RG KEA+A+AV+ +  CP+CV  H T L+A      +AA+  G A +  DP    +A 
Sbjct  72   MTRGDKEAIASAVSQANSCPYCVQVHGTALHALLPGPDSAALAGGAADSVADPRLRALAR  131

Query  123  AAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRAGG  182
             A TG     PAP       E +GTA  FH++ R+V + L    +P    A   +RR   
Sbjct  132  WAATGR---EPAPLDRGHLPEAIGTAATFHYLNRMVNIFLGPPPIPAD--APAAVRRVAT  186

Query  183  LVFARKVRA----EHRPGRSTRRLEPRTLPDDLAWA--TPSEPIATAFAALSHHLDTAPH  236
            L+  R +R        PGRS   L    LP DL WA  TP+   A A AA +      P 
Sbjct  187  LLMGRTLRQHALRHQEPGRSLDLLPSAPLPPDLHWARRTPTVAGAFARAAAAIDAPATPA  246

Query  237  LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDD  296
            L P  R ++   +  W G P  +++ W +   AEL        RL LLT  A ++V +  
Sbjct  247  LTPSVRALLHERLAVWDGTPPGLATTWLDTALAELSPQDRPAGRLVLLTAFASYRVAEPA  306

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEG  335
            V     L  T   L+   +WAAFT AR   T +     G
Sbjct  307  VLPFLRLGRTPDDLLALTSWAAFTTARHAATRLTDGETG  345


>gi|289767996|ref|ZP_06527374.1| DNA-binding protein [Streptomyces lividans TK24]
 gi|289698195|gb|EFD65624.1| DNA-binding protein [Streptomyces lividans TK24]
Length=340

 Score =  141 bits (356),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 133/342 (39%), Positives = 172/342 (51%), Gaps = 34/342 (9%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEP--LAMLSPDEGLLTAGWATLRETLLVG  61
              H EP+ P+ A G VAEVYA+A R+FG +PEP     LS    L+   WA +RE+LL G
Sbjct  8    FRHTEPLPPKAATGQVAEVYAQAARDFG-IPEPAPFVALSSAPALVAPAWALMRESLLAG  66

Query  62   QVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA  121
               R  KE  A  V+ + +C +CVDAHT +L+A G    A  +  G  P A + +A  + 
Sbjct  67   PGDRTGKEVAAFGVSQANKCRFCVDAHTMLLHATGDHALAERLAGGREP-ADERHARVLD  125

Query  122  WAAGTGTP--AGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRR  179
            WA  T  P  A  P PF P+ A  YLGT + FHFI R+V  L+ ET LP G +  + +R 
Sbjct  126  WARRTRVPGAAREPHPFPPEEAPGYLGTVLAFHFINRVVSSLVTETLLPAGAQRLRPVRS  185

Query  180  AGGLVFARKVRAEHRPGRSTRRL-EPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH--  236
              G   +R VR    PG S   L +P   P   AWA    P+  A+AALS     AP   
Sbjct  186  LAGRSLSRTVRRTAVPGASLPLLDDPGRGP---AWAA-GTPVGPAYAALS---SAAPMGA  238

Query  237  --LPPPTRQVVRRVVGSWHGE-----PMPMSSRWTNEHTAELPADLHAPTRLALLTGLAP  289
              L    + +VR  +  W G      P P   R       E P       RLALL  LAP
Sbjct  239  GLLDADDQDLVRATLRDWDGSHPPRTPDPFPDR------RERPG-----ARLALLVALAP  287

Query  290  HQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGTWIGA  331
            +++TD DVAA R    TD  LV  +A+ AF A  R+ T + A
Sbjct  288  YRITDADVAAWRRPEHTDHCLVHLVAYGAFAAVDRVETALTA  329


>gi|238059244|ref|ZP_04603953.1| hypothetical protein MCAG_00210 [Micromonospora sp. ATCC 39149]
 gi|237881055|gb|EEP69883.1| hypothetical protein MCAG_00210 [Micromonospora sp. ATCC 39149]
Length=388

 Score =  139 bits (351),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 120/340 (36%), Positives = 150/340 (45%), Gaps = 13/340 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-GQ  62
            + +++ V   RA G VAEVY +  R+FG L  P+A+ +P   +L A W  LRETL+V G 
Sbjct  52   IRYVDAVRRGRASGLVAEVYRQVERDFGVLAPPVALHAPAPEVLAAAWVLLRETLIVTGA  111

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAP-YVA  121
             PR  KEAVA AV+    CP+C   H   L          A  +   PA G       V 
Sbjct  112  APRAAKEAVATAVSLGNACPYCATIHNNALGLLAGAGIDGAAGSDPGPAGGGAELEGIVG  171

Query  122  WA--AGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGG--PRAQQLM  177
            WA  AG  TP   P PF      E  G AV  H++ R+V V L +  LP G    A  ++
Sbjct  172  WAMPAGGRTPLDGP-PFPAAQTPELAGVAVLLHYLNRVVNVFLRDVPLPPGVPEFALPVV  230

Query  178  RRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH-  236
             R  G       R  H PG S   L    LP DL+WA     IA AF      +D A   
Sbjct  231  LRVLGWAMMGASRRPHGPGLSLDLLPAAPLPADLSWAAGHPTIAEAFGRACAAIDEAGRR  290

Query  237  -LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDD  295
             +P   R +V   +  WHG P  +S  W  E    LP       RLALL   A +QV   
Sbjct  291  SVPEEVRDLVLVNLVGWHGGPRGISRAWVEELVTGLPEPQRPVARLALLVAFASYQVDPT  350

Query  296  DVAAARSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEG  335
             V   R     D  LV   +W+A  AAR    W+G    G
Sbjct  351  VVRDCRVTGADDRMLVEISSWSAMAAAR----WLGGKLTG  386


>gi|330467645|ref|YP_004405388.1| hypothetical protein VAB18032_18430 [Verrucosispora maris AB-18-032]
 gi|328810616|gb|AEB44788.1| hypothetical protein VAB18032_18430 [Verrucosispora maris AB-18-032]
Length=330

 Score =  137 bits (344),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 117/307 (39%), Positives = 153/307 (50%), Gaps = 18/307 (5%)

Query  14   RAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLL-VGQVPRGRKEAVA  72
            RA G  A VY +  R+FG L  P+++ SP   +L A W  LRETL+  G+V R  +EAVA
Sbjct  5    RADGLTAVVYGQVERDFGMLAPPVSLHSPAPPVLAACWIVLRETLVAAGRVDRATREAVA  64

Query  73   AAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA-WA-AGTG-TP  129
            AAV+    CP+CV+ H+          T A +L   A  AGD     VA WA AGT  T 
Sbjct  65   AAVSTVNSCPYCVEVHSA---------TMAGLLRSAADPAGDDQRRRVAEWARAGTDRTQ  115

Query  130  AGPPAPFGPDV-AAEYLGTAVQFHFIARLVLVLLDETFLPGG-PRAQQ-LMRRAGGLVFA  186
            A    P  P V A E LG A+ FH++ R+V V L+ + LP   P A +  +RR  G + A
Sbjct  116  ARDLVPPVPAVEAVELLGVALVFHYLNRMVNVFLEPSPLPAALPSALRGGVRRVFGQLMA  175

Query  187  RKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH--LPPPTRQV  244
            R  R +  PG +   L    L  DLAW++    +A A A     +D A    +P   R +
Sbjct  176  RGARGDRPPGTARDLLPAAPLAPDLAWSSCHPTLADALARGGAAIDAAGQRSVPTSVRDL  235

Query  245  VRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLL  304
            V   +  W G P  +S  W  E   +LP       RLALLT  A +QV D  VA  R+  
Sbjct  236  VAARLDDWDGRPTGISRAWVGEAVRDLPTVDQPAARLALLTAFASYQVDDQVVADVRAAG  295

Query  305  DTDAALV  311
              D ALV
Sbjct  296  ADDRALV  302


>gi|297203476|ref|ZP_06920873.1| DNA-binding protein [Streptomyces sviceus ATCC 29083]
 gi|297148423|gb|EFH28980.1| DNA-binding protein [Streptomyces sviceus ATCC 29083]
Length=337

 Score =  136 bits (343),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 122/330 (37%), Positives = 162/330 (50%), Gaps = 19/330 (5%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEP--LAMLSPDEGLLTAGWATLRETLLVG  61
              +  P+ P+ A G VAEVY +  R+FG + EP    +LS    LL   WA +RE+L+ G
Sbjct  8    FRYTRPLPPKSATGPVAEVYEQLSRDFG-IDEPVTFVVLSSAPELLAPAWALMRESLIAG  66

Query  62   QVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA  121
               R  KE  A  V+ + RCP+CVDAHT +L+A G    A  +  G  P   + +A  + 
Sbjct  67   PGSRTGKELAALGVSLANRCPFCVDAHTMLLHATGDHALAERVARGERP-VNEEHARVLE  125

Query  122  WAAGTGTPAG---PPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMR  178
            W   T  P G    P PF  + A  YLGTA  FHFI R+V  LL E+ LPG  +  + +R
Sbjct  126  WGRHTRVPGGLGAAPYPFPREHAPGYLGTAFAFHFINRIVSALLTESLLPGNVQRFRAVR  185

Query  179  RAGGLVFARKVRAEHRPGRSTRRLEPRTLPDD---LAWATPSEPIATAFAALSHHLDTAP  235
               G   AR VR   RPG S   L+   LPD     AWA  +       A L   +  A 
Sbjct  186  SLAGRTLARTVRRPARPGASLALLD---LPDPGEAPAWADGTPVGLAYAALLRAAMAGAG  242

Query  236  HLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDD  295
             L    + +V  V+  W G   P+  R   +   E P       RL LL  LAP++++D+
Sbjct  243  LLGTDDQDLVEEVLLDWDGSHPPLDLRGFPDRR-ERPG-----ARLVLLAALAPYRISDE  296

Query  296  DVAAARSLLDTDAALVGALAWAAFTAARRI  325
            DVAA R    TD  LV  +A+ AF A  RI
Sbjct  297  DVAAWRRPEHTDHCLVQLVAYGAFLAVDRI  326


>gi|291442619|ref|ZP_06582009.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 
14672]
 gi|291345514|gb|EFE72470.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 
14672]
Length=346

 Score =  133 bits (335),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 137/346 (40%), Positives = 173/346 (50%), Gaps = 33/346 (9%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            +K + HI  V    A G VAEVY +ARREFG +  PLA+ SP    L A W  LRETLL 
Sbjct  13   LKQIRHIAAVRQDEARGLVAEVYTQARREFGVVAPPLALHSPAPETLAASWLLLRETLLA  72

Query  61   -GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPY  119
             G+V R  KEAVAAAV+ +  CP+CV+ H   L               T P  GD +AP 
Sbjct  73   EGRVSRAAKEAVAAAVSRANDCPYCVEVHEAKL--------------ATLPGTGD-HAPL  117

Query  120  VAWAAGTG-TPA--GPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLP-GGPRAQQ  175
              WA  +G  PA  G P PF    A E LGTAV FH++ R+V + L ++ +P   P A +
Sbjct  118  ADWAHHSGRLPATGGGPLPFDAAQAPEILGTAVTFHYLNRMVRLFLPDSPVPRAAPSAGR  177

Query  176  --LMRRAGGLVFARKVRAEHR----PGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSH  229
              +MR     + AR +R +      PG S   L    LP  L WA  S  +A A A    
Sbjct  178  APVMR-----MVARAMRPDTTTTVTPGASLGLLPDAPLPAGLDWARSSPAVAGALARAVA  232

Query  230  HLDTAPH--LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGL  287
             +D A    +P   R ++   +    G     S  W +  TA L A+     RLALL  L
Sbjct  233  SVDAAAERWIPEAVRALLHSELAVHDGTAPGPSRAWLDTATAPLTAEHLPAARLALLIAL  292

Query  288  APHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIGTWIGAAA  333
             PHQVTD D+A  R+    D  LV   +WAA TAA RIGT +G  A
Sbjct  293  NPHQVTDADIAEFRTAHPADRELVELASWAALTAAVRIGTRLGGPA  338


>gi|193211995|ref|YP_001997948.1| alkylhydroperoxidase like protein [Chlorobaculum parvum NCIB 
8327]
 gi|193085472|gb|ACF10748.1| alkylhydroperoxidase like protein, AhpD family [Chlorobaculum 
parvum NCIB 8327]
Length=334

 Score =  132 bits (333),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 103/324 (32%), Positives = 152/324 (47%), Gaps = 12/324 (3%)

Query  14   RAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRGRKEAVAA  73
            RA G  AEVY +   EF  +P P+ +   +  L+   W+  RE+L+ G   R  KE +A 
Sbjct  13   RASGLAAEVYRQLDEEFMTVP-PVTLHHLNSQLMAGVWSACRESLVAGP-DRALKELIAV  70

Query  74   AVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAWAAGTGTPA---  130
            AV+ S RCP+CV AH++ML  A       A+ +G    A D  +   AWA+ TG  A   
Sbjct  71   AVSQSNRCPYCVQAHSSMLQDANDRPALDAVSSGER--ANDDLSNLAAWASATGRKAALA  128

Query  131  GPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRA----QQLMRRAGGLVFA  186
              P PF    A  ++ TAV FH+I R+V + LD+T +P   +      Q  R    +   
Sbjct  129  SVPPPFTKPQAPAFMATAVLFHYINRMVNIFLDDTMMPVVGKVPVIGDQAFRLFSSVTSG  188

Query  187  RKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLD-TAPHLPPPTRQVV  245
            R VR + +PG          LP++  WA     +A      +  +   A  +    + +V
Sbjct  189  RIVRIDAKPGVFLTGSPAMKLPEEFGWAGDDPAVAGGLLRFADAVRAIADSVDSGVQSLV  248

Query  246  RRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLD  305
            +R V +W GEP  +   W  +    LP  L    RLALL  +A   V   ++A+ R    
Sbjct  249  KRHVVAWQGEPPGIDKGWLEDAVRTLPEKLKPQARLALLAAMASWAVDSGEIASCRRAGL  308

Query  306  TDAALVGALAWAAFTAARRIGTWI  329
             D AL+   AW A+ A  RI +W+
Sbjct  309  DDRALLETSAWGAYLATERIASWL  332


>gi|24575115|gb|AAL06686.1| unknown [Streptomyces globisporus]
Length=346

 Score =  132 bits (332),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 123/346 (36%), Positives = 160/346 (47%), Gaps = 44/346 (12%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            ++ V +++ V+PRRA   VA VY E   +FG L  PLA+ SP    L A W  LRETLLV
Sbjct  13   LRQVRYVDVVSPRRARSLVARVYRETEEQFGVLAPPLALHSPAAASLAATWLMLRETLLV  72

Query  61   -GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPY  119
             G+V R  KE VA  V+ +  CP+CV  H  +L              GT P  G   A  
Sbjct  73   DGRVSRAVKETVATEVSRANDCPYCVQVHQAVL--------------GTLPPDGG-QAGL  117

Query  120  VAWA-------AGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPG---  169
            + W         G     G P PF  + A E  G  V FH+I R+V + LD++ +P    
Sbjct  118  LRWVREAGRRPGGGAVGGGRPLPFSGEQAPELCGVVVTFHYINRMVSLFLDDSPMPTRTP  177

Query  170  ----GP--RAQQL-MRRAG-GLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIA  221
                GP  R   L MR  G GL+          PG S   L P  LP  L WA  +  +A
Sbjct  178  TPLRGPIMRTTALAMRPVGPGLLT---------PGASLGLLPPAPLPPGLEWAEGNPFVA  228

Query  222  TAFAALSHHLDTAPH-LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTR  280
             A       +D   H +P P R+ +R  + +W G    +   W +E  + LP       R
Sbjct  229  QALGRAVAAVDQGAHWVPEPVRERLRTRLDTWDGSAPGLGRGWLDEAVSGLPPQDVPAAR  288

Query  281  LALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIG  326
            LALLT  AP+QV  DDV   R    TD  LV   ++AA T A R+G
Sbjct  289  LALLTAFAPYQVLPDDVEEFRRRRPTDRELVELTSYAALTTAVRVG  334


>gi|300788698|ref|YP_003768989.1| hypothetical protein AMED_6866 [Amycolatopsis mediterranei U32]
 gi|299798212|gb|ADJ48587.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=353

 Score =  132 bits (332),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 124/333 (38%), Positives = 168/333 (51%), Gaps = 14/333 (4%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            ++ V +++ V PR+A G V EVY +  R+FG L  P+A+ S    +L A W  LRE+L+ 
Sbjct  10   LRDVKYVDVVPPRQARGLVREVYRQVERDFGMLAPPVALHSAAPDVLAAAWLMLRESLIA  69

Query  61   G-QVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-P  118
            G    R  KE VAAAV+A+  CP+CV+ H   L + G+ D AAAI AG      D +   
Sbjct  70   GGTASRADKEVVAAAVSAANSCPYCVEVHGMALGSLGEPDAAAAIAAGDTGGIADRDTRE  129

Query  119  YVAWAAGTGT-PAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLM  177
              AWA G G  PA  PA       AE+ G AV FH++ R+V V L  + LP    A    
Sbjct  130  LAAWARGAGQLPADVPA----GAVAEFTGVAVTFHYLNRMVSVFLGPSPLPDAVPASARA  185

Query  178  RRAGGLVFARKVRAEHRPGRSTRRLE--PRTLPDDLAWATPSEPIATAFAALSHHLDTAP  235
            +    L F  K  A   PG +   L+  P   PD   WA P  P+A AF+  +  ++ A 
Sbjct  186  KAKAVLGFLLKPGAAPPPGEALGLLQASPVAGPD---WAPPGGPLAGAFSRAAAAIEAAG  242

Query  236  HLP--PPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVT  293
                 P  R +VRR + +W G+   +S  W     AELP    A  RLALL   AP+QVT
Sbjct  243  ERSAAPRVRDLVRRELKAWDGKSPGLSRAWAELPAAELPGSERAEGRLALLVAKAPYQVT  302

Query  294  DDDVAAARSLLDTDAALVGALAWAAFTAARRIG  326
              DV A       D  L+  ++WA+  AA  +G
Sbjct  303  SADVVAFGPERTGDRGLLELVSWASHAAALELG  335


>gi|254392929|ref|ZP_05008096.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 
27064]
 gi|294817892|ref|ZP_06776534.1| Carboxymuconolactone decarboxylase family protein [Streptomyces 
clavuligerus ATCC 27064]
 gi|197706583|gb|EDY52395.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 
27064]
 gi|294322707|gb|EFG04842.1| Carboxymuconolactone decarboxylase family protein [Streptomyces 
clavuligerus ATCC 27064]
Length=347

 Score =  131 bits (330),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 128/333 (39%), Positives = 157/333 (48%), Gaps = 32/333 (9%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQV  63
            V H+  V P  A G VA VY +A R+FG +  P+A+ SP   +L   WA LRETLLVG V
Sbjct  16   VRHVSAVRPAAARGQVAAVYRQAERDFGAVAPPIALHSPAPDVLAGAWAMLRETLLVGTV  75

Query  64   P-RGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAP--AAGDPNAPYV  120
              R  KEAVA AV+ +  CP+CV  H   L            L   AP  AAGD + P V
Sbjct  76   MGRTAKEAVATAVSEANTCPYCVQIHGATLSG----------LRSDAPPDAAGD-DGPVV  124

Query  121  AW----AAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGG--PRAQ  174
            AW            G P P  P    E +GTAV FH++ R+V V LD++ LP    P A+
Sbjct  125  AWLREGRRRPPGSGGGPPPCPPAAVPEMVGTAVAFHYLNRMVNVFLDDSPLPSASPPAAR  184

Query  175  QLMRRAGGLVFARKVRAEH----RPGRSTRRLEPRTLPDDLAW--ATPSEPIATAFAALS  228
              + R    +  R +RA       PG S   L    LPDDLAW  ATP    A A AA  
Sbjct  185  DAVLR----MVTRALRARSAESPAPGDSLALLPEAPLPDDLAWAAATPHIGAAFARAAAV  240

Query  229  HHLDTAPHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLA  288
                 A   P P R +V   +  W G P      W  E T  LP +     RLALLT LA
Sbjct  241  LEAAGARSTPVPVRSLVLAELERWDGRPPGPVRTWLEERTRPLPTEARPAGRLALLTALA  300

Query  289  PHQVTDDDVAAARSLL--DTDAALVGALAWAAF  319
             +QV   D+ A R+      D  LV   +W +F
Sbjct  301  SYQVGPADIDAVRATATGSADRLLVELTSWVSF  333


>gi|326446979|ref|ZP_08221713.1| hypothetical protein SclaA2_38180 [Streptomyces clavuligerus 
ATCC 27064]
Length=334

 Score =  131 bits (329),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 125/329 (38%), Positives = 153/329 (47%), Gaps = 24/329 (7%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQV  63
            V H+  V P  A G VA VY +A R+FG +  P+A+ SP   +L   WA LRETLLVG V
Sbjct  3    VRHVSAVRPAAARGQVAAVYRQAERDFGAVAPPIALHSPAPDVLAGAWAMLRETLLVGTV  62

Query  64   P-RGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAP--AAGDPNAPYV  120
              R  KEAVA AV+ +  CP+CV  H   L            L   AP  AAGD + P V
Sbjct  63   MGRTAKEAVATAVSEANTCPYCVQIHGATLSG----------LRSDAPPDAAGD-DGPVV  111

Query  121  AW----AAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGG--PRAQ  174
            AW            G P P  P    E +GTAV FH++ R+V V LD++ LP    P A+
Sbjct  112  AWLREGRRRPPGSGGGPPPCPPAAVPEMVGTAVAFHYLNRMVNVFLDDSPLPSASPPAAR  171

Query  175  QLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAW--ATPSEPIATAFAALSHHLD  232
              + R        +      PG S   L    LPDDLAW  ATP    A A AA      
Sbjct  172  DAVLRMVTRALRARSAESPAPGDSLALLPEAPLPDDLAWAAATPHIGAAFARAAAVLEAA  231

Query  233  TAPHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQV  292
             A   P P R +V   +  W G P      W  E T  LP +     RLALLT LA +QV
Sbjct  232  GARSTPVPVRSLVLAELERWDGRPPGPVRTWLEERTRPLPTEARPAGRLALLTALASYQV  291

Query  293  TDDDVAAARSLL--DTDAALVGALAWAAF  319
               D+ A R+      D  LV   +W +F
Sbjct  292  GPADIDAVRATATGSADRLLVELTSWVSF  320


>gi|340530314|gb|AEK45519.1| hypothetical protein RAM_35230 [Amycolatopsis mediterranei S699]
Length=341

 Score =  130 bits (328),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 123/330 (38%), Positives = 166/330 (51%), Gaps = 14/330 (4%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVG-Q  62
            + +++ V PR+A G V EVY +  R+FG L  P+A+ S    +L A W  LRE+L+ G  
Sbjct  1    MKYVDVVPPRQARGLVREVYRQVERDFGMLAPPVALHSAAPDVLAAAWLMLRESLIAGGT  60

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-PYVA  121
              R  KE VAAAV+A+  CP+CV+ H   L + G+ D AAAI AG      D +     A
Sbjct  61   ASRADKEVVAAAVSAANSCPYCVEVHGMALGSLGEPDAAAAIAAGDTGGIADRDTRELAA  120

Query  122  WAAGTGT-PAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA  180
            WA G G  PA  PA       AE+ G AV FH++ R+V V L  + LP    A    +  
Sbjct  121  WARGAGQLPADVPA----GAVAEFTGVAVTFHYLNRMVSVFLGPSPLPDAVPASARAKAK  176

Query  181  GGLVFARKVRAEHRPGRSTRRLE--PRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLP  238
              L F  K  A   PG +   L+  P   PD   WA P  P+A AF+  +  ++ A    
Sbjct  177  AVLGFLLKPGAAPPPGEALGLLQASPVAGPD---WAPPGGPLAGAFSRAAAAIEAAGERS  233

Query  239  --PPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDD  296
              P  R +VRR + +W G+   +S  W     AELP    A  RLALL   AP+QVT  D
Sbjct  234  AAPRVRDLVRRELKAWDGKSPGLSRAWAELPAAELPGSERAEGRLALLVAKAPYQVTSAD  293

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRIG  326
            V A       D  L+  ++WA+  AA  +G
Sbjct  294  VVAFGPERTGDRGLLELVSWASHAAALELG  323


>gi|145595228|ref|YP_001159525.1| alkylhydroperoxidase [Salinispora tropica CNB-440]
 gi|145304565|gb|ABP55147.1| alkylhydroperoxidase like protein, AhpD family [Salinispora tropica 
CNB-440]
Length=360

 Score =  129 bits (324),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 128/330 (39%), Positives = 163/330 (50%), Gaps = 10/330 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-GQ  62
            V ++ PV    A  AV  VY    REFG L  P+A+ +P   +L   W  LRETL+  G 
Sbjct  17   VRYVRPVPRGSAPPAVRRVYDPLEREFGVLAPPVALHAPQPQVLAVAWVLLRETLVARGH  76

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-PYVA  121
              R  +EAVAAAV+    CP+CVD HT+ LY   Q   AAA+ AG      DP+    V 
Sbjct  77   ATRATREAVAAAVSLGNACPYCVDVHTSTLYGLVQGPDAAAVAAGRVDVVTDPDIRTLVR  136

Query  122  WAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGP--RAQQLMRR  179
            WA G         PF   VA E LG AV FH++ R+V V LD++ +P     R +   RR
Sbjct  137  WARGPVVVGP--PPFPAAVAPELLGVAVTFHYLNRMVNVFLDDSPVPPAVPGRLRGGTRR  194

Query  180  AGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH--L  237
              G +         +PG +   L    LP DL WA     IA AFA  S  +D      +
Sbjct  195  LLGAMLRPAASRSVQPGAALALLPAAPLPSDLDWALGRPTIAAAFARASAVVDELADAAV  254

Query  238  PPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPT-RLALLTGLAPHQVTDDD  296
            P   R++V   + +W G P  +S  W  +  A L A  H PT RLALLT +A HQV D  
Sbjct  255  PAVVRELVGERIAAWDGTPPGISRAWAADAVAGL-APAHRPTARLALLTAMASHQVDDAV  313

Query  297  VAAARSLLDTDAALVGALAWAAFTAARRIG  326
            V         DA L+   AWA+ TAARR+G
Sbjct  314  VHDHGHRAPGDADLLTVTAWASLTAARRLG  343


>gi|256378145|ref|YP_003101805.1| hypothetical protein Amir_4103 [Actinosynnema mirum DSM 43827]
 gi|255922448|gb|ACU37959.1| hypothetical protein Amir_4103 [Actinosynnema mirum DSM 43827]
Length=342

 Score =  124 bits (312),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 131/334 (40%), Positives = 163/334 (49%), Gaps = 23/334 (6%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-GQ  62
            V  + PV    A G VA VY E  R+FG L  P+A+ SP   +L A W  LRETLLV G+
Sbjct  19   VRRVRPVRHGAADGRVARVYRELERDFGVLAPPVALHSPAPDVLAAVWLVLRETLLVPGR  78

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
             PR  KEAV+ AV+ + RCP+CV  H+++L      D             G+P     A 
Sbjct  79   APRVVKEAVSTAVSEANRCPFCVTMHSSVL-----DDLVVR---------GNPGGAASAA  124

Query  123  AAGTGTPAGP----PAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMR  178
            A   G  A      PAPF  + A E LGTAV  H + R+V + L    LP G  A  ++ 
Sbjct  125  AEWAGAAAFAGSTAPAPFPAEQAPEVLGTAVVLHHLNRMVNLFLGALPLPPGAPAASMVV  184

Query  179  RAGGLVFARKVRAEHRP--GRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAP-  235
                LV   +      P  G S   L    LP DLAWA     +  AFA  +  LD A  
Sbjct  185  VRRVLVRLIQAAGRSGPMRGASLDLLPEADLPADLAWAGADPVLGQAFARAAGALDAAGR  244

Query  236  -HLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTD  294
              +P   R++V   +  W G    +S  W  E  A LPA   A  RLALLT LA +QV D
Sbjct  245  RSVPVGARELVLERLAGWDGRAPGVSRAWAEEAVAGLPAPERAAGRLALLTALAAYQVDD  304

Query  295  DDVAAARSLLDTDAALVGALAWAAFTAARRIGTW  328
              VAA R +   D ALV   AWA+  AARRIG+W
Sbjct  305  AAVAAFREVDREDRALVELTAWASMAAARRIGSW  338


>gi|28192470|gb|AAM77983.1| unknown [Streptomyces carzinostaticus subsp. neocarzinostaticus]
Length=347

 Score =  124 bits (310),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 119/331 (36%), Positives = 156/331 (48%), Gaps = 20/331 (6%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQ-  62
            V H++ V PR A G VA VY +  R+FG L  PLA+ S     L AGW  LRETLL G+ 
Sbjct  16   VRHVDVVDPRTADGLVAAVYTQCERDFGVLAPPLALHSAAAAPLAAGWLLLRETLLAGRD  75

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
              R  KEAVA  V+ + RCP+CV+ H   L      DT         PAA D       W
Sbjct  76   ADRAVKEAVATTVSRANRCPYCVEVHQAKL------DTL------RLPAAKDVATEIAEW  123

Query  123  AAGTGTPAGPPAPFGPDV----AAEYLGTAVQFHFIARLVLVLLDETFLPGGP--RAQQL  176
                  P  P  P    +    AAE  G AV FH++ R+V V L ++ +P     R + +
Sbjct  124  VQAVERPRQPRRPAPDGLTAAQAAELFGVAVTFHYLNRMVSVFLGDSPVPEPVPGRMRGV  183

Query  177  MRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPH  236
            + R      A   R    PG S   L    LP +LAWA  S  +A A A  +  ++ A  
Sbjct  184  IMRVVAKSMAPAARVPLEPGTSLDLLPSARLPPELAWAEASPAVAGALARATAAVNGAAR  243

Query  237  -LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDD  295
             +P   R+ +RR +  W GEP+  S  W +E T   P       RL LLT  AP+QV + 
Sbjct  244  WIPHRVREGLRRRLSEWDGEPVGPSRAWLDEATRRYPPAEAPLARLVLLTAFAPYQVVEA  303

Query  296  DVAAARSLLDTDAALVGALAWAAFTAARRIG  326
            DV + R     D  L+   +W+A T A  IG
Sbjct  304  DVRSFRERHPLDRELIEVTSWSALTTAFHIG  334


>gi|159036215|ref|YP_001535468.1| carboxymuconolactone decarboxylase [Salinispora arenicola CNS-205]
 gi|157915050|gb|ABV96477.1| Carboxymuconolactone decarboxylase [Salinispora arenicola CNS-205]
Length=363

 Score =  112 bits (280),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 111/332 (34%), Positives = 153/332 (47%), Gaps = 8/332 (2%)

Query  2    KFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-  60
            + V ++ PV    A G VA VY +   E G +  P+ + SP    L A WA  RE+L+  
Sbjct  8    RQVRYVTPVPAGAAEGPVARVYDQVVEEMGLVIPPVLVHSPAPAALAAFWALFRESLIAS  67

Query  61   GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNA-PY  119
            G V R  KE VAAA+  +  CP+CVD H+  +Y     + A A++A  +    D      
Sbjct  68   GDVDRAAKETVAAAIGVATTCPYCVDMHSVAMYELATEEDAEAVVADRSADLADGRLRAL  127

Query  120  VAWAAGTGTPA--GPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGG--PRAQQ  175
            V WAA     A    PA       AE L   V  H++ R+V V L    LP G  PRA++
Sbjct  128  VRWAATAHLDARTALPAQLTTAGRAELLAVLVSMHYLTRVVNVFLPGFLLPSGLTPRARR  187

Query  176  LMRRAGGLVFARKVRAEHRPGRSTRRLEPRT--LPDDLAWATPSEPIATAFAALSHHLDT  233
              +R    +    +   + PGR+  R   R+  +P   A A P    A   AA +     
Sbjct  188  RFKRGVAQLMRSLLHRYNAPGRALGRRTSRSAGVPPTWAAAVPPLAAAYTGAAEAFEEAG  247

Query  234  APHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVT  293
            A  L P  R+++   +  W G    + +RW     A LP    A  RL LLT +A ++V 
Sbjct  248  ARSLSPAVRRLLWDRLAGWDGSDPGLDTRWCERLVAGLPEPERAAGRLVLLTAIASYRVD  307

Query  294  DDDVAAARSLLDTDAALVGALAWAAFTAARRI  325
             + VA  R     D  LV A+AWAAFT AR I
Sbjct  308  AEVVAGFRRHHPDDVTLVEAVAWAAFTTARVI  339


>gi|164665139|gb|ABY66000.1| unknown [Actinomadura madurae]
Length=365

 Score =  109 bits (272),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 112/296 (38%), Positives = 139/296 (47%), Gaps = 9/296 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV-GQ  62
            + ++ PV    A G VA VYA+  R+FG L  P+A+ +    +L A W  LRETL+  G 
Sbjct  17   IRYVTPVPYAAARGTVARVYAQVERDFGLLAPPVALHAAVPEVLAAAWTMLRETLVASGA  76

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA-  121
              R  KEAVA AV+ +  CP+CV+ H   +      D A  I A       DP    VA 
Sbjct  77   ADRTTKEAVATAVSLANTCPYCVEVHGVTMRGLAADDAAGLIAADRIGEIADPGLRAVAE  136

Query  122  WAAGTGTP-AGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGG-PRAQQLMRR  179
            WA  TGTP AG P    P  A E +G AV F ++ R+V V L ++ LP   P   +   R
Sbjct  137  WARRTGTPEAGAPPSGSP--AGELVGVAVTFQYLNRMVNVFLPDSPLPANLPDPARGAAR  194

Query  180  AGGLVFARKVRAEHR-PGRSTRRLEPRTLPDDLAWA--TPSEPIATAFAALSHHLDTAPH  236
                   R     HR PG S   L P   PDDLAWA   P    A A AA +        
Sbjct  195  RLAARIMRSGARTHRAPGGSAGLLPPAPPPDDLAWAAGAPDVADAFARAAAAVEEAGRRW  254

Query  237  LPPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQV  292
            LP P R VV   +  W G P   S  WT     +LP       RLALLT +A +QV
Sbjct  255  LPGPVRDVVSAALDEWDGRPPGPSRAWTGPLVRDLPESARPAARLALLTAMASYQV  310


>gi|318081582|ref|ZP_07988897.1| alkylhydroperoxidase [Streptomyces sp. SA3_actF]
Length=180

 Score =  105 bits (263),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 66/160 (42%), Positives = 90/160 (57%), Gaps = 4/160 (2%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLL-VGQ  62
            + +  P+AP  A G  A V+ E  R+FG L  P+A+ +P   LL A W  LRETLL  GQ
Sbjct  17   IRYFAPLAPADARGLAAVVHEETERDFGMLAPPVALHTPSPPLLAATWIMLRETLLATGQ  76

Query  63   VPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAW  122
            + RG KEA+A+AV+ +  CP+CV  H T L+A      +AA+  G A +  DP    +A 
Sbjct  77   MTRGDKEAIASAVSQANSCPYCVQVHGTALHALLPGPDSAALAGGAADSVADPRLRALAR  136

Query  123  AAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLL  162
             A TG     PAP  P    E +GTA  FH++ R+V + L
Sbjct  137  WAATGR---GPAPLDPGHLPEAIGTAATFHYLNRMVNIFL  173


>gi|110598858|ref|ZP_01387111.1| putative DNA-binding protein [Chlorobium ferrooxidans DSM 13031]
 gi|110339519|gb|EAT58041.1| putative DNA-binding protein [Chlorobium ferrooxidans DSM 13031]
Length=170

 Score =  100 bits (249),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 65/169 (39%), Positives = 87/169 (52%), Gaps = 6/169 (3%)

Query  4    VNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQV  63
            + +I   AP  A     +V  + +REFG   EP  +  P   LL   W  +RETLL G  
Sbjct  3    IRYITSSAP--ADTLSGKVLGQIKREFGAEVEPFTLHLPVPELLAGVWIAVRETLLAGSG  60

Query  64   PRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA-W  122
             R  KE VAAAV++  RCP+C+DAH+ M+  +   D + A+  G      D     VA W
Sbjct  61   RRDAKEVVAAAVSSLNRCPYCLDAHSIMVLESSGHDYSKALADGAPEQIEDAFLREVAEW  120

Query  123  AAGTGTPAGP---PAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLP  168
            A  T TP  P     PF    A  ++GTAV FH+I R+V +LL  + LP
Sbjct  121  ARATRTPGSPLLATTPFSTKEAPAFIGTAVVFHYINRMVTILLGSSTLP  169


>gi|254385215|ref|ZP_05000546.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194344091|gb|EDX25057.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=248

 Score = 89.0 bits (219),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 65/171 (39%), Positives = 88/171 (52%), Gaps = 6/171 (3%)

Query  1    MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV  60
            +K + H+  V    A   VA+VY +ARREFG +  PLA+ SP    L A W  LRETLLV
Sbjct  29   LKQIRHVTAVPHADAEDLVAQVYDQARREFGVVAPPLALHSPAPVALAASWLMLRETLLV  88

Query  61   -GQVPRGRKEAVAAAVAASLRCPWCVDAHTTML--YAAGQTDTAAAILAGTAPAAGDPNA  117
             G+  R  KEAVA  V+ +  CP+CV+ H   L     G+ D A   +A  A  +     
Sbjct  89   DGRTSRAAKEAVATGVSEANECPYCVEVHRAKLDTLPGGRDDRALGPIADWARTSAAAAP  148

Query  118  PYVAWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLP  168
               A  AG+  P  P    G    AE  G AV FH++ R+V + L ++ +P
Sbjct  149  TDSADPAGSADPRLPADAAG---IAELYGVAVTFHYLNRMVRLFLPDSPVP  196


>gi|297190934|ref|ZP_06908332.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150695|gb|EFH30741.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
Length=99

 Score = 80.1 bits (196),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 42/91 (47%), Positives = 55/91 (61%), Gaps = 1/91 (1%)

Query  8   EPVAPRRAGGAVAEVYAEARREFG-RLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRG  66
           +P  P  A G  A+VY +  R+FG        +LS    L+T  WA LRE+LL G+V R 
Sbjct  9   DPAPPSAATGVTADVYGQMARDFGIERAATFVVLSDSPPLMTGAWALLRESLLAGRVSRT  68

Query  67  RKEAVAAAVAASLRCPWCVDAHTTMLYAAGQ  97
            KE VAA V+ + RCP+CVDAHT +L+A G 
Sbjct  69  DKEVVAAGVSLANRCPFCVDAHTVLLHATGD  99


>gi|291303339|ref|YP_003514617.1| hypothetical protein Snas_5896 [Stackebrandtia nassauensis DSM 
44728]
 gi|290572559|gb|ADD45524.1| hypothetical protein Snas_5896 [Stackebrandtia nassauensis DSM 
44728]
Length=325

 Score = 78.6 bits (192),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 100/330 (31%), Positives = 129/330 (40%), Gaps = 18/330 (5%)

Query  2    KFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVG  61
              V H+ PVAPR A G VA+VY     EF  +   + M SP   +L  GWA L E+ L G
Sbjct  3    SMVRHVRPVAPRWARGVVADVYRHVGSEFADIGPTVRMASPTPEILAPGWALLWESRLAG  62

Query  62   QVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVA  121
            ++P   K      VA + RC    D     L  AG  + A  + AG  P        +  
Sbjct  63   ELPLPHKLLAGLGVAQANRCGHDEDDWLAALRRAGAGELAEQVAAGGPPDEARLTRLF-D  121

Query  122  WAAGTGT--PAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRR  179
            WA  T     A  P    P  A E +GT +  HF  R+ L +L     PG       +  
Sbjct  122  WARATAFDPSARMPVRLRPKPAPELIGTVLFAHFRDRMSLAMLAPGLSPG-------IEA  174

Query  180  AGGLVFARKVRAEHRPGRSTRRLEPRT--LPDDLAWATPSEPIATAFAALSHHLDTAPHL  237
            A      R  R   RPG  T  L  RT   PD   W   S       A  ++    A  +
Sbjct  175  AASAPLWRNSRPVLRPG-DTLTLLKRTGKTPD---WGADSPVGIAYGALAANAARGAGMM  230

Query  238  PPPTRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDV  297
                   V  V+ ++ G   P  S         L        R A+L GLAP ++TD DV
Sbjct  231  SAEAAHTVTEVIAAYRGRIQPDPSLICLGELNRLSEADRFAARAAILAGLAPAELTDADV  290

Query  298  AAARSLLD--TDAALVGALAWAAFTAARRI  325
             A R+     +D   V  LA+ A TA   I
Sbjct  291  LAWRATDRHLSDHCTVLLLAYGAMTAVAHI  320


>gi|110598820|ref|ZP_01387078.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110339577|gb|EAT58094.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length=123

 Score = 77.8 bits (190),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 49/123 (40%), Positives = 64/123 (53%), Gaps = 2/123 (1%)

Query  209  DDLAWATPSEPIATAFAALSHHLDT--APHLPPPTRQVVRRVVGSWHGEPMPMSSRWTNE  266
            DDLAWA PS  I+ AFA  +  ++   A  L    R  V   V +W+G    M + W  E
Sbjct  1    DDLAWAEPSPVISAAFARFAQVIEKHGAMALSTEVRNAVHAAVQNWNGSDPDMHNLWCEE  60

Query  267  HTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFTAARRIG  326
              A L     +  RLALLT LAP +V    V A  S    D  L+ ALAW++F AA+R G
Sbjct  61   AIANLTETDKSAGRLALLTALAPWRVDKTVVKAFSSSFPGDERLIAALAWSSFEAAKRTG  120

Query  327  TWI  329
            +W+
Sbjct  121  SWL  123



Lambda     K      H
   0.319    0.133    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 629895873072


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40