BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2160A

Length=211
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57116952|ref|YP_177660.1|  hypothetical protein Rv2160A [Mycob...   421    3e-116
gi|167966688|ref|ZP_02548965.1|  hypothetical protein MtubH3_0089...   390    6e-107
gi|31793340|ref|NP_855833.1|  hypothetical protein Mb2184c [Mycob...   204    6e-51 
gi|340627168|ref|YP_004745620.1|  putative TetR family transcript...   196    2e-48 
gi|326903777|gb|EGE50710.1|  hypothetical protein TBPG_01659 [Myc...   186    2e-45 
gi|289758283|ref|ZP_06517661.1|  conserved hypothetical protein [...   135    3e-30 
gi|284030443|ref|YP_003380374.1|  TetR family transcriptional reg...   104    7e-21 
gi|226359583|ref|YP_002777361.1|  TetR family transcriptional reg...   103    2e-20 
gi|158337307|ref|YP_001518482.1|  TetR family transcriptional reg...   101    6e-20 
gi|300790075|ref|YP_003770366.1|  TetR family transcriptional reg...  99.8    3e-19 
gi|111220339|ref|YP_711133.1|  TetR family transcriptional regula...  97.8    8e-19 
gi|320007627|gb|ADW02477.1|  regulatory protein TetR [Streptomyce...  95.5    5e-18 
gi|297561801|ref|YP_003680775.1|  TetR family transcriptional reg...  95.1    6e-18 
gi|241763454|ref|ZP_04761508.1|  transcriptional regulator, TetR ...  94.7    8e-18 
gi|337765507|emb|CCB74216.1|  putative TetR-family transcriptiona...  94.7    8e-18 
gi|209963736|ref|YP_002296651.1|  transcriptional regulator, TetR...  94.4    1e-17 
gi|297203099|ref|ZP_06920496.1|  TetR family transcriptional regu...  94.4    1e-17 
gi|160896783|ref|YP_001562365.1|  TetR family transcriptional reg...  94.0    1e-17 
gi|333916771|ref|YP_004490503.1|  regulatory protein TetR [Delfti...  94.0    1e-17 
gi|311900502|dbj|BAJ32910.1|  putative TetR family transcriptiona...  94.0    1e-17 
gi|182435077|ref|YP_001822796.1|  TetR family transcriptional reg...  93.6    2e-17 
gi|239991775|ref|ZP_04712439.1|  TetR family transcriptional regu...  93.2    2e-17 
gi|325000415|ref|ZP_08121527.1|  TetR family transcriptional regu...  93.2    2e-17 
gi|288919745|ref|ZP_06414071.1|  transcriptional regulator, TetR ...  93.2    2e-17 
gi|319761393|ref|YP_004125330.1|  regulatory protein tetr [Alicyc...  92.8    3e-17 
gi|330823263|ref|YP_004386566.1|  regulatory protein TetR [Alicyc...  92.8    3e-17 
gi|238028609|ref|YP_002912840.1|  TetR family transcriptional reg...  91.3    9e-17 
gi|134296919|ref|YP_001120654.1|  TetR family transcriptional reg...  91.3    9e-17 
gi|311897490|dbj|BAJ29898.1|  putative TetR family transcriptiona...  90.9    1e-16 
gi|167585484|ref|ZP_02377872.1|  transcriptional regulator, TetR ...  90.9    1e-16 
gi|120612727|ref|YP_972405.1|  TetR family transcriptional regula...  90.9    1e-16 
gi|325521383|gb|EGD00223.1|  TetR family transcriptional regulato...  90.9    1e-16 
gi|161523757|ref|YP_001578769.1|  TetR family transcriptional reg...  90.9    1e-16 
gi|121593018|ref|YP_984914.1|  TetR family transcriptional regula...  90.9    1e-16 
gi|332527384|ref|ZP_08403440.1|  TetR family regulatory protein [...  90.9    1e-16 
gi|326318790|ref|YP_004236462.1|  regulatory protein TetR [Acidov...  90.5    1e-16 
gi|264680339|ref|YP_003280249.1|  TetR family transcriptional reg...  90.5    1e-16 
gi|187922666|ref|YP_001894308.1|  TetR family transcriptional reg...  90.5    2e-16 
gi|299532696|ref|ZP_07046084.1|  transcriptional regulator, TetR ...  90.1    2e-16 
gi|222109786|ref|YP_002552050.1|  TetR family transcriptional reg...  90.1    2e-16 
gi|171060703|ref|YP_001793052.1|  TetR family transcriptional reg...  90.1    2e-16 
gi|323524744|ref|YP_004226897.1|  regulatory protein TetR [Burkho...  89.7    2e-16 
gi|296160995|ref|ZP_06843806.1|  transcriptional regulator, TetR ...  89.7    2e-16 
gi|53718290|ref|YP_107276.1|  TetR family regulatory protein [Bur...  89.7    2e-16 
gi|170691428|ref|ZP_02882593.1|  transcriptional regulator, TetR ...  89.7    2e-16 
gi|78067518|ref|YP_370287.1|  TetR family transcriptional regulat...  89.7    2e-16 
gi|121608206|ref|YP_996013.1|  TetR family transcriptional regula...  89.7    2e-16 
gi|307728455|ref|YP_003905679.1|  regulatory protein TetR [Burkho...  89.7    2e-16 
gi|167822789|ref|ZP_02454260.1|  transcriptional regulator, TetR ...  89.7    3e-16 
gi|186475153|ref|YP_001856623.1|  TetR family transcriptional reg...  89.7    3e-16 


>gi|57116952|ref|YP_177660.1| hypothetical protein Rv2160A [Mycobacterium tuberculosis H37Rv]
 gi|148823369|ref|YP_001288123.1| hypothetical protein TBFG_12190 [Mycobacterium tuberculosis F11]
 gi|254551197|ref|ZP_05141644.1| hypothetical protein Mtube_12158 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 8 more sequence titles
 
gi|289554053|ref|ZP_06443263.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|297634749|ref|ZP_06952529.1| hypothetical protein MtubK4_11531 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731738|ref|ZP_06960856.1| hypothetical protein MtubKR_11641 [Mycobacterium tuberculosis 
KZN R506]
 gi|313659073|ref|ZP_07815953.1| hypothetical protein MtubKV_11656 [Mycobacterium tuberculosis 
KZN V2475]
 gi|38490317|emb|CAE55461.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148721896|gb|ABR06521.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|289438685|gb|EFD21178.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|344219983|gb|AEN00614.1| hypothetical protein MTCTRI2_2196 [Mycobacterium tuberculosis 
CTRI-2]
Length=211

 Score =  421 bits (1082),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%)

Query  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60
            MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT
Sbjct  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60

Query  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVPAAAFSRPRPPTWTHSLAR  120
            VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVPAAAFSRPRPPTWTHSLAR
Sbjct  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVPAAAFSRPRPPTWTHSLAR  120

Query  121  CATASPRPGGPESPPSRPTSKRRNAGARSGRISKCANSRSSCTPTRWRPTGRCCCSTTTA  180
            CATASPRPGGPESPPSRPTSKRRNAGARSGRISKCANSRSSCTPTRWRPTGRCCCSTTTA
Sbjct  121  CATASPRPGGPESPPSRPTSKRRNAGARSGRISKCANSRSSCTPTRWRPTGRCCCSTTTA  180

Query  181  PESGRERRSTRPWPESAPPRRESNHEICQPY  211
            PESGRERRSTRPWPESAPPRRESNHEICQPY
Sbjct  181  PESGRERRSTRPWPESAPPRRESNHEICQPY  211


>gi|167966688|ref|ZP_02548965.1| hypothetical protein MtubH3_00898 [Mycobacterium tuberculosis 
H37Ra]
Length=217

 Score =  390 bits (1002),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60
            MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT
Sbjct  13   MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  72

Query  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVPAAAFSRPRPPTWTHSLAR  120
            VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVPAAAFSRPRPPTWTHSLAR
Sbjct  73   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVPAAAFSRPRPPTWTHSLAR  132

Query  121  CATASPRPGGPESPPSRPTSKRRNAGARSGRISKCANSRSSCTPTRWRPTGRCCCSTTTA  180
            CATASPRPGGPESPPSRPTSKRRNAGARSGRISKCANSRSSCTPTRWRPTGRCCCSTTTA
Sbjct  133  CATASPRPGGPESPPSRPTSKRRNAGARSGRISKCANSRSSCTPTRWRPTGRCCCSTTTA  192

Query  181  PESGRERRSTRPWPES  196
            PESGRERRSTRPWPES
Sbjct  193  PESGRERRSTRPWPES  208


>gi|31793340|ref|NP_855833.1| hypothetical protein Mb2184c [Mycobacterium bovis AF2122/97]
 gi|121638042|ref|YP_978266.1| hypothetical protein BCG_2177c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224990536|ref|YP_002645223.1| hypothetical protein JTY_2171 [Mycobacterium bovis BCG str. Tokyo 
172]
 23 more sequence titles
 
gi|289443666|ref|ZP_06433410.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447788|ref|ZP_06437532.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289570277|ref|ZP_06450504.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574843|ref|ZP_06455070.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745434|ref|ZP_06504812.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289750757|ref|ZP_06510135.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754270|ref|ZP_06513648.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|294993546|ref|ZP_06799237.1| hypothetical protein Mtub2_03314 [Mycobacterium tuberculosis 
210]
 gi|298525654|ref|ZP_07013063.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|31618932|emb|CAD97037.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493690|emb|CAL72165.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773649|dbj|BAH26455.1| hypothetical protein JTY_2171 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289416585|gb|EFD13825.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420746|gb|EFD17947.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289539274|gb|EFD43852.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544031|gb|EFD47679.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289685962|gb|EFD53450.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691344|gb|EFD58773.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694857|gb|EFD62286.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298495448|gb|EFI30742.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339295077|gb|AEJ47188.1| hypothetical protein CCDC5079_1998 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298698|gb|AEJ50808.1| hypothetical protein CCDC5180_1971 [Mycobacterium tuberculosis 
CCDC5180]
 gi|341602080|emb|CCC64754.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=206

 Score =  204 bits (520),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 101/101 (100%), Positives = 101/101 (100%), Gaps = 0/101 (0%)

Query  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60
            MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT
Sbjct  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60

Query  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV
Sbjct  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101


>gi|340627168|ref|YP_004745620.1| putative TetR family transcriptional regulator [Mycobacterium 
canettii CIPT 140010059]
 gi|340005358|emb|CCC44516.1| putative TetR family transcriptional regulator [Mycobacterium 
canettii CIPT 140010059]
Length=206

 Score =  196 bits (497),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 98/101 (98%), Positives = 98/101 (98%), Gaps = 0/101 (0%)

Query  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60
            MPSADVGRQTRAQILRAAMD ASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT
Sbjct  1    MPSADVGRQTRAQILRAAMDTASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60

Query  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            VEAAVSVFEAEVVAPAMAA PGVDRVRALMHAWV YLERDV
Sbjct  61   VEAAVSVFEAEVVAPAMAAVPGVDRVRALMHAWVRYLERDV  101


>gi|326903777|gb|EGE50710.1| hypothetical protein TBPG_01659 [Mycobacterium tuberculosis W-148]
Length=206

 Score =  186 bits (471),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 100/101 (99%), Positives = 100/101 (99%), Gaps = 0/101 (0%)

Query  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60
            MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT
Sbjct  1    MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60

Query  61   VEAAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            VEAAVSVFEAEV APAMAAPPGVDRVRALMHAWVGYLERDV
Sbjct  61   VEAAVSVFEAEVAAPAMAAPPGVDRVRALMHAWVGYLERDV  101


>gi|289758283|ref|ZP_06517661.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289713847|gb|EFD77859.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=67

 Score =  135 bits (341),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 67/67 (100%), Positives = 67/67 (100%), Gaps = 0/67 (0%)

Query  1   MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60
           MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT
Sbjct  1   MPSADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLAT  60

Query  61  VEAAVSV  67
           VEAAVSV
Sbjct  61  VEAAVSV  67


>gi|284030443|ref|YP_003380374.1| TetR family transcriptional regulator [Kribbella flavida DSM 
17836]
 gi|283809736|gb|ADB31575.1| transcriptional regulator, TetR family [Kribbella flavida DSM 
17836]
Length=211

 Score =  104 bits (260),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 59/95 (63%), Positives = 69/95 (73%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G QTR  +LRAA+DIASV GL GLSIG LA  L +SKSGLF HFG+KE+LQLATV AA +
Sbjct  13   GDQTRRAVLRAAVDIASVDGLEGLSIGRLAKELQISKSGLFAHFGSKEELQLATVRAARA  72

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            ++   VV PA A PPGV RV AL  +W+ Y  R V
Sbjct  73   IYARAVVEPAYAVPPGVGRVWALSESWLDYSRRRV  107


>gi|226359583|ref|YP_002777361.1| TetR family transcriptional regulator [Rhodococcus opacus B4]
 gi|226238068|dbj|BAH48416.1| putative TetR family transcriptional regulator [Rhodococcus opacus 
B4]
Length=212

 Score =  103 bits (256),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 50/95 (53%), Positives = 67/95 (71%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G +TR  +L AA D+AS+ GL GL+IG LA   GMSKSGLF HFG+K+ LQLAT+E A  
Sbjct  10   GAKTRETVLHAAADVASIDGLDGLTIGHLASLTGMSKSGLFAHFGSKQDLQLATIEVARQ  69

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
             +  EVV PA+ + PG+ R+ AL  +++ Y+ER V
Sbjct  70   RYVREVVTPALESGPGMQRLTALCESFLSYVERGV  104


>gi|158337307|ref|YP_001518482.1| TetR family transcriptional regulator [Acaryochloris marina MBIC11017]
 gi|158307548|gb|ABW29165.1| transcriptional regulator, TetR family [Acaryochloris marina 
MBIC11017]
Length=211

 Score =  101 bits (252),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 54/95 (57%), Positives = 67/95 (71%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G QTR  IL+ AMD+ASV GL+GLSIG LA  L MSKSGLF HFG+KE LQLA +E A  
Sbjct  12   GEQTRRAILQCAMDLASVDGLTGLSIGGLAKELQMSKSGLFAHFGSKEALQLAVIEGARH  71

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            +   EVV PA+ AP G+ R+ +L  AW+ Y E+ +
Sbjct  72   LVLREVVRPALRAPKGLPRLWSLCEAWLHYTEQQL  106


>gi|300790075|ref|YP_003770366.1| TetR family transcriptional regulator [Amycolatopsis mediterranei 
U32]
 gi|299799589|gb|ADJ49964.1| TetR family transcriptional regulator [Amycolatopsis mediterranei 
U32]
 gi|340531752|gb|AEK46957.1| TetR family transcriptional regulator [Amycolatopsis mediterranei 
S699]
Length=200

 Score = 99.8 bits (247),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 51/95 (54%), Positives = 70/95 (74%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G  TR  +LR A+D+ASV GL+GLS+G LA  L +SKSG+F  FG+KE+LQLAT++AA++
Sbjct  10   GDATRRLVLRRAVDVASVDGLAGLSLGRLATELELSKSGVFALFGSKEELQLATIDAALA  69

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            +F + VV PA A  PG+ R+RA+   W+ Y ER V
Sbjct  70   IFRSHVVTPARAEAPGLPRLRAVCERWLDYSERRV  104


>gi|111220339|ref|YP_711133.1| TetR family transcriptional regulator [Frankia alni ACN14a]
 gi|111147871|emb|CAJ59536.1| transcriptional regulatory protein; TetR family [Frankia alni 
ACN14a]
Length=223

 Score = 97.8 bits (242),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 50/95 (53%), Positives = 67/95 (71%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G +TRA IL AA+ +++V GL GLSIG LA  LGMSK G++ HF +K+ LQLATVEAA  
Sbjct  18   GDRTRAAILDAAVRLSTVDGLEGLSIGNLAKDLGMSKGGVYAHFDSKQDLQLATVEAAGV  77

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            +F +EV+ PA+ A PGV ++ A    +  +LER V
Sbjct  78   IFRSEVIEPALTADPGVPQLLAFCDGFFDHLERRV  112


>gi|320007627|gb|ADW02477.1| regulatory protein TetR [Streptomyces flavogriseus ATCC 33331]
Length=217

 Score = 95.5 bits (236),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 50/95 (53%), Positives = 66/95 (70%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G QTR  +L  A+ +AS +GL GLS+G LA  L +SKSG+F  FG+KE+LQLATV AAV+
Sbjct  13   GNQTRQLVLGRAVHVASTEGLEGLSLGRLATELKLSKSGVFALFGSKEELQLATVRAAVT  72

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            VF   V+ P  AAPPG+ RV  +  +W+ Y +R V
Sbjct  73   VFVEHVLTPTRAAPPGLGRVWRMCESWLSYSQRRV  107


>gi|297561801|ref|YP_003680775.1| TetR family transcriptional regulator [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
 gi|296846249|gb|ADH68269.1| transcriptional regulator, TetR family [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
Length=218

 Score = 95.1 bits (235),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 49/90 (55%), Positives = 63/90 (70%), Gaps = 0/90 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G QTR  +L  A+  ASV+GL GLS+G LA  LG+SKSG+F HFG+KE+LQLAT+EA  +
Sbjct  12   GDQTRRAVLEHAVHTASVEGLEGLSLGRLAKELGVSKSGVFAHFGSKEELQLATLEAGRA  71

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGY  96
            VF   VV  A+   PGV+R+  L   W+GY
Sbjct  72   VFVRHVVRDALEVRPGVERLWRLCVDWIGY  101


>gi|241763454|ref|ZP_04761508.1| transcriptional regulator, TetR family [Acidovorax delafieldii 
2AN]
 gi|241367396|gb|EER61717.1| transcriptional regulator, TetR family [Acidovorax delafieldii 
2AN]
Length=234

 Score = 94.7 bits (234),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 47/88 (54%), Positives = 63/88 (72%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ +    +
Sbjct  27   GQQTKAVIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVIREYHT  86

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAMAAP GV R+RAL   W+
Sbjct  87   RFEQEVFYPAMAAPRGVARLRALFDNWM  114


>gi|337765507|emb|CCB74216.1| putative TetR-family transcriptional regulator [Streptomyces 
cattleya NRRL 8057]
Length=201

 Score = 94.7 bits (234),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 50/98 (52%), Positives = 67/98 (69%), Gaps = 0/98 (0%)

Query  3    SADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVE  62
            SA   R+TR +I+  ++ +ASV+GL GL+IG LA  LGMSKSG+  HFG KE LQLA +E
Sbjct  6    SAAEARRTRDRIVDRSVAVASVEGLEGLTIGRLAADLGMSKSGVLGHFGTKETLQLAALE  65

Query  63   AAVSVFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERD  100
             A ++F   V  PA  A PG+ R+RA+   W+ YLER+
Sbjct  66   RASAIFTRAVWDPAAEATPGLTRLRAVCEGWIRYLERE  103


>gi|209963736|ref|YP_002296651.1| transcriptional regulator, TetR family protein [Rhodospirillum 
centenum SW]
 gi|209957202|gb|ACI97838.1| transcriptional regulator, TetR family protein [Rhodospirillum 
centenum SW]
Length=197

 Score = 94.4 bits (233),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 47/96 (49%), Positives = 65/96 (68%), Gaps = 0/96 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G +TRA IL  A+ + S +G++GL+IG LA RLGMSKSGLF HFG+KE LQ A +E A++
Sbjct  4    GERTRAAILDQALAVTSTEGVTGLTIGTLADRLGMSKSGLFAHFGSKELLQQAVLEHALA  63

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDVP  102
            +F   V+ PA+A P G+ RV      W+ ++   VP
Sbjct  64   LFTERVLRPAVARPRGLPRVETFFDGWIVWIREGVP  99


>gi|297203099|ref|ZP_06920496.1| TetR family transcriptional regulatory protein [Streptomyces 
sviceus ATCC 29083]
 gi|197717439|gb|EDY61473.1| TetR family transcriptional regulatory protein [Streptomyces 
sviceus ATCC 29083]
Length=211

 Score = 94.4 bits (233),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 50/95 (53%), Positives = 65/95 (69%), Gaps = 0/95 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G +TR  +LR A+DIASV+GL  LS+G LAG L +SKSG+F  FG+K++LQLATV  A  
Sbjct  22   GNRTRRTVLRRAVDIASVEGLEALSVGRLAGELELSKSGVFALFGSKQELQLATVREASR  81

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGYLERDV  101
            +F  EV+ PA  A  G+ R+R L   W+ Y ER V
Sbjct  82   IFVTEVLEPASGAADGLVRLRDLCEGWLRYSERRV  116


>gi|160896783|ref|YP_001562365.1| TetR family transcriptional regulator [Delftia acidovorans SPH-1]
 gi|160362367|gb|ABX33980.1| transcriptional regulator, TetR family [Delftia acidovorans SPH-1]
Length=235

 Score = 94.0 bits (232),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 46/88 (53%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+++A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ V     
Sbjct  42   GQQTKATIVEAALNLATHIGLEGLSIGALAELTGMSKSGVFAHFGSREELQISVVHEYHD  101

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PA+ AP GV R+RAL   W+
Sbjct  102  RFEQEVFFPALQAPRGVARLRALFDNWM  129


>gi|333916771|ref|YP_004490503.1| regulatory protein TetR [Delftia sp. Cs1-4]
 gi|333746971|gb|AEF92148.1| regulatory protein TetR [Delftia sp. Cs1-4]
Length=235

 Score = 94.0 bits (232),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 46/88 (53%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+++A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ V     
Sbjct  42   GQQTKATIVEAALNLATHIGLEGLSIGALAELTGMSKSGVFAHFGSREELQISVVHEYHD  101

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PA+ AP GV R+RAL   W+
Sbjct  102  RFEQEVFFPALEAPRGVARLRALFDNWM  129


>gi|311900502|dbj|BAJ32910.1| putative TetR family transcriptional regulator [Kitasatospora 
setae KM-6054]
Length=204

 Score = 94.0 bits (232),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 48/91 (53%), Positives = 66/91 (73%), Gaps = 0/91 (0%)

Query  8    RQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVSV  67
            R+TRA+I+  ++ +ASV GL GL+IG LA  LG+SK+G+  HFG KE LQLAT+E A ++
Sbjct  11   RRTRARIIDRSVALASVDGLEGLTIGRLASDLGLSKAGVLGHFGTKEALQLATLERACAL  70

Query  68   FEAEVVAPAMAAPPGVDRVRALMHAWVGYLE  98
            F A V  PA A  PG+ R+RA+  +W+ YLE
Sbjct  71   FTALVWDPAAAVRPGLCRLRAVCRSWIDYLE  101


>gi|182435077|ref|YP_001822796.1| TetR family transcriptional regulator [Streptomyces griseus subsp. 
griseus NBRC 13350]
 gi|326775715|ref|ZP_08234980.1| regulatory protein TetR [Streptomyces cf. griseus XylebKG-1]
 gi|178463593|dbj|BAG18113.1| putative TetR-family transcriptional regulator [Streptomyces 
griseus subsp. griseus NBRC 13350]
 gi|326656048|gb|EGE40894.1| regulatory protein TetR [Streptomyces griseus XylebKG-1]
Length=213

 Score = 93.6 bits (231),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 49/90 (55%), Positives = 62/90 (69%), Gaps = 0/90 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G QTR  IL  A+ IASV+GL GLS+G LA  LG+SKSG+F  FG+KE LQLATV  AV+
Sbjct  13   GNQTRQLILGRAVQIASVEGLEGLSLGRLATELGLSKSGVFALFGSKEGLQLATVRGAVA  72

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGY  96
            ++   V+ P  + PPG+ RV  L  AW+ Y
Sbjct  73   IYVDHVLRPTRSVPPGLGRVWRLCEAWIAY  102


>gi|239991775|ref|ZP_04712439.1| TetR family transcriptional regulator [Streptomyces roseosporus 
NRRL 11379]
 gi|291448778|ref|ZP_06588168.1| TetR family transcriptional regulatory protein [Streptomyces 
roseosporus NRRL 15998]
 gi|291351725|gb|EFE78629.1| TetR family transcriptional regulatory protein [Streptomyces 
roseosporus NRRL 15998]
Length=217

 Score = 93.2 bits (230),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 49/90 (55%), Positives = 62/90 (69%), Gaps = 0/90 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G QTR  IL  A+ IASV+GL GLS+G LA  LG+SKSG+F  FG+KE LQLATV  AV+
Sbjct  13   GNQTRQLILGRAVQIASVEGLEGLSLGRLATELGLSKSGVFALFGSKEGLQLATVRGAVA  72

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGY  96
            V+   V+ P  + PPG+ RV  +  AW+ Y
Sbjct  73   VYVDHVLRPTRSVPPGLGRVWRMCEAWIAY  102


>gi|325000415|ref|ZP_08121527.1| TetR family transcriptional regulator [Pseudonocardia sp. P1]
Length=200

 Score = 93.2 bits (230),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 49/90 (55%), Positives = 65/90 (73%), Gaps = 0/90 (0%)

Query  10   TRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVSVFE  69
            T+ +IL  A +IASV+GL G++IG LA  L MSKSG+ +HFG KE LQ++T++AA   F 
Sbjct  13   TKDRILGRAAEIASVEGLDGITIGRLADELAMSKSGVHKHFGTKESLQVSTLDAAFVDFW  72

Query  70   AEVVAPAMAAPPGVDRVRALMHAWVGYLER  99
              VV PA+A PPG+ R+RA+    VGYLER
Sbjct  73   HRVVEPALAEPPGLQRLRAVCANSVGYLER  102


>gi|288919745|ref|ZP_06414071.1| transcriptional regulator, TetR family [Frankia sp. EUN1f]
 gi|288348845|gb|EFC83096.1| transcriptional regulator, TetR family [Frankia sp. EUN1f]
Length=205

 Score = 93.2 bits (230),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 47/85 (56%), Positives = 59/85 (70%), Gaps = 0/85 (0%)

Query  9   QTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVSVF  68
            TRA I+R A DIASV+G+ G++IG LA  L MSKSG+  HFG KEQLQLAT+E AV +F
Sbjct  12  DTRAAIVRCAADIASVEGMEGVTIGRLAAELEMSKSGVIGHFGTKEQLQLATLEYAVDLF  71

Query  69  EAEVVAPAMAAPPGVDRVRALMHAW  93
              V  P    PPG+DR+ A+  +W
Sbjct  72  RTRVWDPVSHRPPGLDRLLAICESW  96


>gi|319761393|ref|YP_004125330.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
 gi|317115954|gb|ADU98442.1| regulatory protein TetR [Alicycliphilus denitrificans BC]
Length=218

 Score = 92.8 bits (229),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            GRQT+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ +    +
Sbjct  24   GRQTKAAIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVIREYHA  83

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAM AP G+ R+RA+   W+
Sbjct  84   RFEQEVFYPAMEAPRGIARLRAMFDNWM  111


>gi|330823263|ref|YP_004386566.1| regulatory protein TetR [Alicycliphilus denitrificans K601]
 gi|329308635|gb|AEB83050.1| regulatory protein TetR [Alicycliphilus denitrificans K601]
Length=218

 Score = 92.8 bits (229),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            GRQT+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ +    +
Sbjct  24   GRQTKAAIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVIREYHA  83

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAM AP G+ R+RA+   W+
Sbjct  84   RFEQEVFYPAMEAPRGIARLRAMFDNWM  111


>gi|238028609|ref|YP_002912840.1| TetR family transcriptional regulator [Burkholderia glumae BGR1]
 gi|330818284|ref|YP_004361989.1| Transcriptional regulator, TetR family protein [Burkholderia 
gladioli BSR3]
 gi|237877803|gb|ACR30136.1| Transcriptional regulator, TetR family [Burkholderia glumae BGR1]
 gi|327370677|gb|AEA62033.1| Transcriptional regulator, TetR family protein [Burkholderia 
gladioli BSR3]
Length=199

 Score = 91.3 bits (225),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 61/88 (70%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE+EV  P++  P G+ R+RA++  W+
Sbjct  64  RFESEVFFPSLREPRGLPRLRAMLARWI  91


>gi|134296919|ref|YP_001120654.1| TetR family transcriptional regulator [Burkholderia vietnamiensis 
G4]
 gi|134140076|gb|ABO55819.1| transcriptional regulator, TetR family [Burkholderia vietnamiensis 
G4]
Length=199

 Score = 91.3 bits (225),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARWI  91


>gi|311897490|dbj|BAJ29898.1| putative TetR family transcriptional regulator [Kitasatospora 
setae KM-6054]
Length=207

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 49/90 (55%), Positives = 61/90 (68%), Gaps = 0/90 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G +TR  +L  A+ IASV+GL  LSIG LA  LG+SKSG+F  FG+KE+LQLATV AA  
Sbjct  14   GNETRRAVLGRAVQIASVEGLGALSIGRLASDLGLSKSGVFAGFGSKEELQLATVRAAKR  73

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWVGY  96
            +F   VV PA+  P GV R+ AL   W+ Y
Sbjct  74   IFYDRVVTPALERPEGVARLLALCEYWLEY  103


>gi|167585484|ref|ZP_02377872.1| transcriptional regulator, TetR family protein [Burkholderia 
ubonensis Bu]
Length=199

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARWI  91


>gi|120612727|ref|YP_972405.1| TetR family transcriptional regulator [Acidovorax citrulli AAC00-1]
 gi|120591191|gb|ABM34631.1| transcriptional regulator, TetR family [Acidovorax citrulli AAC00-1]
Length=342

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 46/88 (53%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ V     
Sbjct  147  GQQTKAAIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVVREYHV  206

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAM+AP G+ R+RAL   W+
Sbjct  207  RFEHEVFYPAMSAPRGLPRLRALFDNWM  234


>gi|325521383|gb|EGD00223.1| TetR family transcriptional regulator [Burkholderia sp. TJI49]
Length=199

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARWI  91


>gi|161523757|ref|YP_001578769.1| TetR family transcriptional regulator [Burkholderia multivorans 
ATCC 17616]
 gi|189351482|ref|YP_001947110.1| TetR family transcriptional regulator [Burkholderia multivorans 
ATCC 17616]
 gi|221200077|ref|ZP_03573120.1| transcriptional regulator, TetR family [Burkholderia multivorans 
CGD2M]
 7 more sequence titles
 
gi|221206770|ref|ZP_03579782.1| transcriptional regulator, TetR family [Burkholderia multivorans 
CGD2]
 gi|221211259|ref|ZP_03584238.1| transcriptional regulator, TetR family [Burkholderia multivorans 
CGD1]
 gi|160341186|gb|ABX14272.1| transcriptional regulator, TetR family [Burkholderia multivorans 
ATCC 17616]
 gi|189335504|dbj|BAG44574.1| TetR family transcriptional regulator [Burkholderia multivorans 
ATCC 17616]
 gi|221168620|gb|EEE01088.1| transcriptional regulator, TetR family [Burkholderia multivorans 
CGD1]
 gi|221173425|gb|EEE05860.1| transcriptional regulator, TetR family [Burkholderia multivorans 
CGD2]
 gi|221180316|gb|EEE12720.1| transcriptional regulator, TetR family [Burkholderia multivorans 
CGD2M]
Length=199

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARWI  91


>gi|121593018|ref|YP_984914.1| TetR family transcriptional regulator [Acidovorax sp. JS42]
 gi|120605098|gb|ABM40838.1| transcriptional regulator, TetR family [Acidovorax sp. JS42]
Length=221

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 61/88 (70%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+ T+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ +    +
Sbjct  24   GQHTKAVIIDAALGLATHIGLEGLSIGALAEVTGMSKSGVFAHFGSREELQISVIREYHT  83

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAM AP GV R+RAL   W+
Sbjct  84   RFEQEVFYPAMQAPRGVSRLRALFANWM  111


>gi|332527384|ref|ZP_08403440.1| TetR family regulatory protein [Rubrivivax benzoatilyticus JA2]
 gi|332111793|gb|EGJ11773.1| TetR family regulatory protein [Rubrivivax benzoatilyticus JA2]
Length=217

 Score = 90.9 bits (224),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 46/88 (53%), Positives = 61/88 (70%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QTRA IL AA+ +AS  GL GLSIG LA  + MSKSG+F HFG++E+LQ++ +    +
Sbjct  18   GQQTRAAILDAALGLASHMGLEGLSIGTLAEMMQMSKSGVFAHFGSREELQISVIREYHT  77

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAMA   G+ R+RAL   W+
Sbjct  78   RFEEEVFFPAMAEARGLPRLRALFERWI  105


>gi|326318790|ref|YP_004236462.1| regulatory protein TetR [Acidovorax avenae subsp. avenae ATCC 
19860]
 gi|323375626|gb|ADX47895.1| regulatory protein TetR [Acidovorax avenae subsp. avenae ATCC 
19860]
Length=256

 Score = 90.5 bits (223),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 46/88 (53%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ V     
Sbjct  61   GQQTKAAIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVVREYHV  120

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAM+AP G+ R+RAL   W+
Sbjct  121  RFEHEVFYPAMSAPRGLPRLRALFDNWM  148


>gi|264680339|ref|YP_003280249.1| TetR family transcriptional regulator [Comamonas testosteroni 
CNB-2]
 gi|262210855|gb|ACY34953.1| transcriptional regulator, TetR family [Comamonas testosteroni 
CNB-2]
Length=264

 Score = 90.5 bits (223),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+++A+  GL GLSIG +A   GMSKSG+F HFG++E+LQ++ V     
Sbjct  68   GQQTKATIVEAALNLATHIGLEGLSIGAIAELTGMSKSGVFAHFGSREELQISVVHEYHD  127

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PA+ AP G+ R+RAL   W+
Sbjct  128  RFEQEVFYPAIEAPRGIPRLRALFGNWM  155


>gi|187922666|ref|YP_001894308.1| TetR family transcriptional regulator [Burkholderia phytofirmans 
PsJN]
 gi|187713860|gb|ACD15084.1| transcriptional regulator, TetR family [Burkholderia phytofirmans 
PsJN]
Length=199

 Score = 90.5 bits (223),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFEDEVFFPSLREPRGLPRLRAMISRWI  91


>gi|299532696|ref|ZP_07046084.1| transcriptional regulator, TetR family protein [Comamonas testosteroni 
S44]
 gi|298719331|gb|EFI60300.1| transcriptional regulator, TetR family protein [Comamonas testosteroni 
S44]
Length=212

 Score = 90.1 bits (222),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+++A+  GL GLSIG +A   GMSKSG+F HFG++E+LQ++ V     
Sbjct  16   GQQTKATIVEAALNLATHIGLEGLSIGAIAELTGMSKSGVFAHFGSREELQISVVHEYHD  75

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PA+ AP G+ R+RAL   W+
Sbjct  76   RFEQEVFYPAIEAPRGIPRLRALFGNWM  103


>gi|222109786|ref|YP_002552050.1| TetR family transcriptional regulator [Acidovorax ebreus TPSY]
 gi|221729230|gb|ACM32050.1| transcriptional regulator, TetR family [Acidovorax ebreus TPSY]
Length=221

 Score = 90.1 bits (222),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 61/88 (70%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+ T+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ +    +
Sbjct  24   GQHTKAVIIDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVIREYHT  83

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PAM AP GV R+RAL   W+
Sbjct  84   RFEQEVFYPAMQAPRGVPRLRALFANWM  111


>gi|171060703|ref|YP_001793052.1| TetR family transcriptional regulator [Leptothrix cholodnii SP-6]
 gi|170778148|gb|ACB36287.1| transcriptional regulator, TetR family [Leptothrix cholodnii 
SP-6]
Length=219

 Score = 90.1 bits (222),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/92 (49%), Positives = 63/92 (69%), Gaps = 0/92 (0%)

Query  3    SADVGRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVE  62
            SA  G+QTRA IL AA+ ++S KGL GLSIG LA   GMSKSG+F HFG++E+LQ++ + 
Sbjct  17   SAQKGQQTRASILDAALALSSQKGLEGLSIGALAEVTGMSKSGVFAHFGSREELQISVIR  76

Query  63   AAVSVFEAEVVAPAMAAPPGVDRVRALMHAWV  94
               + FE E+  PA+  P G+ R+ A+   W+
Sbjct  77   EYHNRFEEEIFYPAIREPRGLGRLVAMFDRWI  108


>gi|323524744|ref|YP_004226897.1| regulatory protein TetR [Burkholderia sp. CCGE1001]
 gi|323381746|gb|ADX53837.1| regulatory protein TetR [Burkholderia sp. CCGE1001]
Length=199

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILDAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFEDEVFFPSLREPRGLPRLRAMISRWI  91


>gi|296160995|ref|ZP_06843806.1| transcriptional regulator, TetR family [Burkholderia sp. Ch1-1]
 gi|295888694|gb|EFG68501.1| transcriptional regulator, TetR family [Burkholderia sp. Ch1-1]
Length=199

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILDAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFEDEVFFPSLREPRGLPRLRAMISRWI  91


>gi|53718290|ref|YP_107276.1| TetR family regulatory protein [Burkholderia pseudomallei K96243]
 gi|53724998|ref|YP_102031.1| TetR family transcriptional regulator [Burkholderia mallei ATCC 
23344]
 gi|76811393|ref|YP_332269.1| TetR family transcriptional regulator [Burkholderia pseudomallei 
1710b]
 55 more sequence titles
 
gi|83720788|ref|YP_441120.1| TetR family transcriptional regulator [Burkholderia thailandensis 
E264]
 gi|121599586|ref|YP_994045.1| TetR family transcriptional regulator [Burkholderia mallei SAVP1]
 gi|124384631|ref|YP_001028291.1| TetR family transcriptional regulator [Burkholderia mallei NCTC 
10229]
 gi|126441355|ref|YP_001057731.1| TetR family transcriptional regulator [Burkholderia pseudomallei 
668]
 gi|126450733|ref|YP_001081935.1| TetR family transcriptional regulator [Burkholderia mallei NCTC 
10247]
 gi|126453041|ref|YP_001064976.1| TetR family transcriptional regulator [Burkholderia pseudomallei 
1106a]
 gi|134279569|ref|ZP_01766281.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
305]
 gi|167001909|ref|ZP_02267699.1| transcriptional regulator, TetR family [Burkholderia mallei PRL-20]
 gi|167561591|ref|ZP_02354507.1| transcriptional regulator, TetR family protein [Burkholderia 
oklahomensis EO147]
 gi|167568827|ref|ZP_02361701.1| transcriptional regulator, TetR family protein [Burkholderia 
oklahomensis C6786]
 gi|167579870|ref|ZP_02372744.1| transcriptional regulator, TetR family protein [Burkholderia 
thailandensis TXDOH]
 gi|167617945|ref|ZP_02386576.1| transcriptional regulator, TetR family protein [Burkholderia 
thailandensis Bt4]
 gi|167718151|ref|ZP_02401387.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei DM98]
 gi|167737180|ref|ZP_02409954.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei 14]
 gi|167814313|ref|ZP_02445993.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei 91]
 gi|167835476|ref|ZP_02462359.1| transcriptional regulator, TetR family protein [Burkholderia 
thailandensis MSMB43]
 gi|167844364|ref|ZP_02469872.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei B7210]
 gi|167892876|ref|ZP_02480278.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei 7894]
 gi|167901362|ref|ZP_02488567.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei NCTC 13177]
 gi|167909592|ref|ZP_02496683.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei 112]
 gi|167917607|ref|ZP_02504698.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei BCC215]
 gi|217419831|ref|ZP_03451337.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
576]
 gi|237810881|ref|YP_002895332.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
MSHR346]
 gi|238561942|ref|ZP_00441258.2| transcriptional regulator, TetR family [Burkholderia mallei GB8 
horse 4]
 gi|242317408|ref|ZP_04816424.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1106b]
 gi|254176986|ref|ZP_04883643.1| transcriptional regulator, TetR family [Burkholderia mallei ATCC 
10399]
 gi|254187698|ref|ZP_04894210.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
Pasteur 52237]
 gi|254196572|ref|ZP_04902996.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
S13]
 gi|254203717|ref|ZP_04910077.1| transcriptional regulator, TetR family [Burkholderia mallei FMH]
 gi|254208692|ref|ZP_04915040.1| transcriptional regulator, TetR family [Burkholderia mallei JHU]
 gi|254262001|ref|ZP_04953055.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1710a]
 gi|254360252|ref|ZP_04976522.1| transcriptional regulator, TetR family [Burkholderia mallei 2002721280]
 gi|257140218|ref|ZP_05588480.1| transcriptional regulator, TetR family protein [Burkholderia 
thailandensis E264]
 gi|52208704|emb|CAH34640.1| TetR family regulatory protein [Burkholderia pseudomallei K96243]
 gi|52428421|gb|AAU49014.1| transcriptional regulator, TetR family [Burkholderia mallei ATCC 
23344]
 gi|76580846|gb|ABA50321.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1710b]
 gi|83654613|gb|ABC38676.1| transcriptional regulator, TetR family [Burkholderia thailandensis 
E264]
 gi|121228396|gb|ABM50914.1| transcriptional regulator, TetR family [Burkholderia mallei SAVP1]
 gi|124292651|gb|ABN01920.1| transcriptional regulator, TetR family [Burkholderia mallei NCTC 
10229]
 gi|126220848|gb|ABN84354.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
668]
 gi|126226683|gb|ABN90223.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1106a]
 gi|126243603|gb|ABO06696.1| transcriptional regulator, TetR family [Burkholderia mallei NCTC 
10247]
 gi|134248769|gb|EBA48851.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
305]
 gi|147745229|gb|EDK52309.1| transcriptional regulator, TetR family [Burkholderia mallei FMH]
 gi|147750568|gb|EDK57637.1| transcriptional regulator, TetR family [Burkholderia mallei JHU]
 gi|148029492|gb|EDK87397.1| transcriptional regulator, TetR family [Burkholderia mallei 2002721280]
 gi|157935378|gb|EDO91048.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
Pasteur 52237]
 gi|160698027|gb|EDP87997.1| transcriptional regulator, TetR family [Burkholderia mallei ATCC 
10399]
 gi|169653315|gb|EDS86008.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
S13]
 gi|217397135|gb|EEC37151.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
576]
 gi|237503433|gb|ACQ95751.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
MSHR346]
 gi|238523667|gb|EEP87104.1| transcriptional regulator, TetR family [Burkholderia mallei GB8 
horse 4]
 gi|242140647|gb|EES27049.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1106b]
 gi|243062318|gb|EES44504.1| transcriptional regulator, TetR family [Burkholderia mallei PRL-20]
 gi|254220690|gb|EET10074.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1710a]
Length=199

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG+++ LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSRDDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARWI  91


>gi|170691428|ref|ZP_02882593.1| transcriptional regulator, TetR family [Burkholderia graminis 
C4D1M]
 gi|170143633|gb|EDT11796.1| transcriptional regulator, TetR family [Burkholderia graminis 
C4D1M]
Length=199

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILDAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFEDEVFFPSLREPRGLPRLRAMISRWI  91


>gi|78067518|ref|YP_370287.1| TetR family transcriptional regulator [Burkholderia sp. 383]
 gi|115352824|ref|YP_774663.1| TetR family transcriptional regulator [Burkholderia ambifaria 
AMMD]
 gi|170699189|ref|ZP_02890242.1| transcriptional regulator, TetR family [Burkholderia ambifaria 
IOP40-10]
 7 more sequence titles
 
gi|171317327|ref|ZP_02906523.1| transcriptional regulator, TetR family [Burkholderia ambifaria 
MEX-5]
 gi|172061681|ref|YP_001809333.1| TetR family transcriptional regulator [Burkholderia ambifaria 
MC40-6]
 gi|77968263|gb|ABB09643.1| transcriptional regulator, TetR family [Burkholderia sp. 383]
 gi|115282812|gb|ABI88329.1| transcriptional regulator, TetR family [Burkholderia ambifaria 
AMMD]
 gi|170135914|gb|EDT04189.1| transcriptional regulator, TetR family [Burkholderia ambifaria 
IOP40-10]
 gi|171097526|gb|EDT42364.1| transcriptional regulator, TetR family [Burkholderia ambifaria 
MEX-5]
 gi|171994198|gb|ACB65117.1| transcriptional regulator, TetR family [Burkholderia ambifaria 
MC40-6]
Length=199

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/87 (52%), Positives = 59/87 (68%), Gaps = 0/87 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAW  93
            FE EV  P++  P G+ R+RA++  W
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARW  90


>gi|121608206|ref|YP_996013.1| TetR family transcriptional regulator [Verminephrobacter eiseniae 
EF01-2]
 gi|121552846|gb|ABM56995.1| transcriptional regulator, TetR family [Verminephrobacter eiseniae 
EF01-2]
Length=269

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 62/88 (71%), Gaps = 0/88 (0%)

Query  7    GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
            G+QT+A I+ AA+ +A+  GL GLSIG LA   GMSKSG+F HFG++E+LQ++ +    +
Sbjct  55   GQQTKAAIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVIREYHT  114

Query  67   VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
             FE EV  PA++AP GV R+ AL   W+
Sbjct  115  RFEQEVFYPALSAPRGVARLSALFDNWM  142


>gi|307728455|ref|YP_003905679.1| regulatory protein TetR [Burkholderia sp. CCGE1003]
 gi|307582990|gb|ADN56388.1| regulatory protein TetR [Burkholderia sp. CCGE1003]
Length=199

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILDAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFEDEVFFPSLREPRGLPRLRAMISRWI  91


>gi|167822789|ref|ZP_02454260.1| transcriptional regulator, TetR family protein [Burkholderia 
pseudomallei 9]
 gi|254181768|ref|ZP_04888365.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1655]
 gi|184212306|gb|EDU09349.1| transcriptional regulator, TetR family [Burkholderia pseudomallei 
1655]
Length=199

 Score = 89.7 bits (221),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG+++ LQ+  V     
Sbjct  4   GEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSRDDLQVEVVREYHH  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFENEVFFPSLREPRGLPRLRAMLARWI  91


>gi|186475153|ref|YP_001856623.1| TetR family transcriptional regulator [Burkholderia phymatum 
STM815]
 gi|184191612|gb|ACC69577.1| transcriptional regulator, TetR family [Burkholderia phymatum 
STM815]
Length=201

 Score = 89.7 bits (221),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 45/88 (52%), Positives = 60/88 (69%), Gaps = 0/88 (0%)

Query  7   GRQTRAQILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAKEQLQLATVEAAVS  66
           G QTRA IL AA+D+AS  GL GL+IG LA R+ MSKSG+F HFG++E LQ+  V     
Sbjct  4   GEQTRAAILDAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHR  63

Query  67  VFEAEVVAPAMAAPPGVDRVRALMHAWV  94
            FE EV  P++  P G+ R+RA++  W+
Sbjct  64  RFEDEVFFPSLREPRGLPRLRAMISRWI  91



Lambda     K      H
   0.317    0.129    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 249157747332


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40