BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2162c
Length=532
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacteri... 873 0.0
gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobac... 873 0.0
gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobact... 870 0.0
gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacteriu... 865 0.0
gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobact... 209 1e-51
gi|289554051|ref|ZP_06443261.1| predicted protein [Mycobacterium... 204 4e-50
gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobac... 203 6e-50
gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobac... 203 8e-50
gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycob... 202 1e-49
gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 164 3e-38
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 164 3e-38
gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 152 1e-34
gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 152 1e-34
gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 152 1e-34
gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 152 1e-34
gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 149 8e-34
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 149 1e-33
gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 149 1e-33
gi|118618628|ref|YP_906960.1| PE-PGRS family protein [Mycobacter... 149 2e-33
gi|183983104|ref|YP_001851395.1| PE-PGRS family protein [Mycobac... 148 2e-33
gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 146 9e-33
gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 146 9e-33
gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 146 9e-33
gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacteri... 146 9e-33
gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 146 9e-33
gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 146 1e-32
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 146 1e-32
gi|254549533|ref|ZP_05139980.1| PE-PGRS family protein [Mycobact... 146 1e-32
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 146 1e-32
gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 145 1e-32
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 145 1e-32
gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 145 1e-32
gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 145 2e-32
gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 145 2e-32
gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacteri... 145 2e-32
gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 145 2e-32
gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobac... 145 3e-32
gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 144 3e-32
gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobact... 144 3e-32
gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacteri... 144 3e-32
gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 144 4e-32
gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacter... 144 4e-32
gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacteri... 144 4e-32
gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobact... 144 4e-32
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 144 4e-32
gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 144 4e-32
gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 144 5e-32
gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobac... 143 6e-32
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 143 9e-32
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 143 1e-31
>gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|57116953|ref|YP_177865.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661978|ref|YP_001283501.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
9 more sequence titles
Length=532
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/532 (100%), Positives = 532/532 (100%), Gaps = 0/532 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG
Sbjct 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
Query 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS
Sbjct 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
Query 301 GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG
Sbjct 301 GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
Query 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG
Sbjct 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
Query 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG
Sbjct 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
Query 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG
Sbjct 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
>gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253320276|gb|ACT24879.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458536|gb|AEB03959.1| hypothetical protein TBSG_01830 [Mycobacterium tuberculosis KZN
4207]
Length=532
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/532 (99%), Positives = 532/532 (100%), Gaps = 0/532 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG
Sbjct 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
Query 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS
Sbjct 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
Query 301 GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
GGAGGAGGAAL+GNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG
Sbjct 301 GGAGGAGGAALVGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
Query 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG
Sbjct 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
Query 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG
Sbjct 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
Query 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG
Sbjct 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
>gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=532
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/532 (99%), Positives = 530/532 (99%), Gaps = 0/532 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
GGWLYGNGGPGGAAGLGTAGGVSP GAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG
Sbjct 181 GGWLYGNGGPGGAAGLGTAGGVSPXXGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
Query 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS
Sbjct 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
Query 301 GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
GGAGGAGGAAL+GNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG
Sbjct 301 GGAGGAGGAALVGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
Query 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG
Sbjct 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
Query 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG
Sbjct 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
Query 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG
Sbjct 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
>gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=532
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/532 (99%), Positives = 529/532 (99%), Gaps = 0/532 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG
Sbjct 181 GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG 240
Query 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS
Sbjct 241 GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS 300
Query 301 GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
GGAGGAGGAAL GNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG
Sbjct 301 GGAGGAGGAALSGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG 360
Query 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG 420
GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGG GGIGGAG
Sbjct 361 GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGAGGIGGAG 420
Query 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG
Sbjct 421 GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG 480
Query 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG 532
DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGS GVLFGTPGANGADG
Sbjct 481 DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSCGVLFGTPGANGADG 532
>gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420748|gb|EFD17949.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=621
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLY 185
GGWLY
Sbjct 181 GGWLY 185
>gi|289554051|ref|ZP_06443261.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|289438683|gb|EFD21176.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=356
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLY 185
GGWLY
Sbjct 181 GGWLY 185
>gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005360|emb|CCC44518.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=526
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLY 185
GGWLY
Sbjct 181 GGWLY 185
>gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331549|emb|CCC27245.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=526
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLY 185
GGWLY
Sbjct 181 GGWLY 185
>gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycobacterium bovis AF2122/97]
gi|121638044|ref|YP_978268.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990538|ref|YP_002645225.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31618934|emb|CAD97039.1| conserved hypothetical protein, PE_PGRS [Mycobacterium bovis
AF2122/97]
gi|121493692|emb|CAL72167.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224773651|dbj|BAH26457.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602082|emb|CCC64756.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=490
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
Query 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
Sbjct 121 DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN 180
Query 181 GGWLY 185
GGWLY
Sbjct 181 GGWLY 185
>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=998
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=608
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/127 (65%), Positives = 102/127 (81%), Gaps = 4/127 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+V+A PE++AAAA +LA IGS++SAA+AAA PT G+LAAGADEVS A+++LF HAQ
Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQTL Q AA+H +F++AL+ AG+Y SAEAAN +QQ LN INAPTQTLLGRPLIG
Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQA-LNVINAPTQTLLGRPLIG 119
Query 118 NGADGGP 124
NG +G P
Sbjct 120 NGTNGAP 126
>gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
18 more sequence titles
Length=609
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/127 (65%), Positives = 102/127 (81%), Gaps = 4/127 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+V+A PE++AAAA +LA IGS++SAA+AAA PT G+LAAGADEVS A+++LF HAQ
Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQTL Q AA+H +F++AL+ AG+Y SAEAAN +QQ LN INAPTQTLLGRPLIG
Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQA-LNVINAPTQTLLGRPLIG 119
Query 118 NGADGGP 124
NG +G P
Sbjct 120 NGTNGAP 126
>gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=650
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/127 (65%), Positives = 102/127 (81%), Gaps = 4/127 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+V+A PE++AAAA +LA IGS++SAA+AAA PT G+LAAGADEVS A+++LF HAQ
Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQTL Q AA+H +F++AL+ AG+Y SAEAAN +QQ LN INAPTQTLLGRPLIG
Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQA-LNVINAPTQTLLGRPLIG 119
Query 118 NGADGGP 124
NG +G P
Sbjct 120 NGTNGAP 126
>gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=606
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/127 (65%), Positives = 102/127 (81%), Gaps = 4/127 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+V+A PE++AAAA +LA IGS++SAA+AAA PT G+LAAGADEVS A+++LF HAQ
Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQTL Q AA+H +F++AL+ AG+Y SAEAAN +QQ LN INAPTQTLLGRPLIG
Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQA-LNVINAPTQTLLGRPLIG 119
Query 118 NGADGGP 124
NG +G P
Sbjct 120 NGTNGAP 126
>gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=625
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/126 (74%), Positives = 107/126 (85%), Gaps = 2/126 (1%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS++IAAPE++AAAATDLA++GSSISAA+AAAA PTM +LAAGADEVS ++ALF +HAQ
Sbjct 1 MSYLIAAPEMVAAAATDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV--QQTLLNAINAPTQTLLGRPLIGN 118
YQ+LSAQ A +H QFV+ALNAGAGSYA AEAA+V Q LN INAPTQ L GRPLIGN
Sbjct 61 AYQSLSAQAALFHEQFVQALNAGAGSYALAEAASVSPLQDALNLINAPTQALFGRPLIGN 120
Query 119 GADGGP 124
GADG P
Sbjct 121 GADGAP 126
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/133 (61%), Positives = 98/133 (74%), Gaps = 9/133 (6%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS V +PE++A AA+DLA IGSS+ AA+AAAAGPT +L+A ADEVSVAI+ LFG+HA
Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---------VQQTLLNAINAPTQTLL 111
YQ+LSA++AA+H QFV+ L +GAG Y S EA N +Q LNAINAPTQ+ L
Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120
Query 112 GRPLIGNGADGGP 124
GRPLIGNG D P
Sbjct 121 GRPLIGNGVDATP 133
>gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis
CCDC5079]
Length=731
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/189 (69%), Positives = 147/189 (78%), Gaps = 7/189 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGG---P-GQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGG 176
+G P GQNGG GNGGNG TA GGNGGSAGLIGNGGAGG G A AGG
Sbjct 121 NGTAENPDGQNGGLLF---GNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGG 177
Query 177 AGGNGGWLY 185
+GGNGGWLY
Sbjct 178 SGGNGGWLY 186
>gi|118618628|ref|YP_906960.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118570738|gb|ABL05489.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=611
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/162 (63%), Positives = 123/162 (76%), Gaps = 6/162 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+VIAAPE++A AATDLA IG+++ +A+ AAA P G+LAAGADE+S A++ALF HA
Sbjct 1 MSYVIAAPEMLAGAATDLAGIGAALQSANGAAAAPITGVLAAGADEISAAVAALFSGHAL 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ LS Q+A +H QFV ALN+ SYA+AEAA+ V+Q LL INAPTQ LLGRP
Sbjct 61 DYQALSTQMAGFHQQFVTALNSAGASYAAAEAASANPLQAVEQQLLGVINAPTQALLGRP 120
Query 115 LIGNGADGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGS 156
LIG+G G PGQNGG GGLL+GNGG GG G A+P GG+GGS
Sbjct 121 LIGDGTAGAPGQNGGDGGLLWGNGGAGGVGTAAHPTGGSGGS 162
>gi|183983104|ref|YP_001851395.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176430|gb|ACC41540.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=783
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/125 (61%), Positives = 97/125 (78%), Gaps = 4/125 (3%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
M ++ AP+ +AAAAT+L ++GS +S +AAAA PT + A ADEVS AI+ALF SHAQ
Sbjct 1 MWYLSVAPDELAAAATELRDVGSIVSTVNAAAAVPTTALWPAAADEVSAAIAALFSSHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQ+LS Q+AAYH+QFVRAL AG SY+ AEAA+ ++Q LL+ IN P+QTLLGRPLIG
Sbjct 61 QYQSLSVQVAAYHDQFVRALAAGGASYSLAEAASASPLEQ-LLDLINLPSQTLLGRPLIG 119
Query 118 NGADG 122
+GADG
Sbjct 120 DGADG 124
>gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1306
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1306
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
7 more sequence titles
Length=1306
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880121|gb|AAK44830.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1306
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=740
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 92/122 (76%), Gaps = 6/122 (4%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS VI APE +AAAA D+A IGSSI A++AAAG T +LAAGADEVS AI+ LFGSHA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ +S Q+AA+H++F + L+A GSY SAEA N ++ +LNA+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1303
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 92/122 (76%), Gaps = 6/122 (4%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS VI APE +AAAA D+A IGSSI A++AAAG T +LAAGADEVS AI+ LFGSHA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ +S Q+AA+H++F + L+A GSY SAEA N ++ +LNA+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|254549533|ref|ZP_05139980.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=734
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/124 (66%), Positives = 101/124 (82%), Gaps = 1/124 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++ AATDLA IGS+I+AA+ AAA +L A ADEVSVA++ALFG+HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQT+SAQ+A +H++FV+ L+A A SY +AEA NV+Q+LL A+NAPTQ L GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGGP 124
DG P
Sbjct 120 DGSP 123
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/123 (62%), Positives = 95/123 (78%), Gaps = 2/123 (1%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
M+FV+ APE++ AAA+DLANIGS+I+ A+ A A PT +LAAG DEVS AI++LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAE--AANVQQTLLNAINAPTQTLLGRPLIGN 118
YQ+L A++ A+H+QFV AL AG G Y+SAE AA Q LLN +NAPTQ LLGRPLIG+
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAD 121
GAD
Sbjct 121 GAD 123
>gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=740
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 92/122 (76%), Gaps = 6/122 (4%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS VI APE +AAAA D+A IGSSI A++AAAG T +LAAGADEVS AI+ LFGSHA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ +S Q+AA+H++F + L+A GSY SAEA N ++ +LNA+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/123 (62%), Positives = 95/123 (78%), Gaps = 2/123 (1%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
M+FV+ APE++ AAA+DLANIGS+I+ A+ A A PT +LAAG DEVS AI++LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAE--AANVQQTLLNAINAPTQTLLGRPLIGN 118
YQ+L A++ A+H+QFV AL AG G Y+SAE AA Q LLN +NAPTQ LLGRPLIG+
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAD 121
GAD
Sbjct 121 GAD 123
>gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=731
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis
CCDC5079]
Length=742
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 6/122 (4%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS VI PE +AAAA+D+A IGSSI A++AAAG T +LAAGADEVS AI+ LFGSHA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ +S Q+AA+H++F + L+A GSY SAEA N ++ +LNA+NAPTQ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=582
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661576|ref|YP_001283099.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148822983|ref|YP_001287737.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
19 more sequence titles
Length=618
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/127 (71%), Positives = 103/127 (82%), Gaps = 3/127 (2%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+++ PE++AAAATDLANIGSSISAA+AAAA PT ++AAG DEVS AI+ALFG+HA+
Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQ LSAQ A +H QFVRAL AG SYA AEAA VQQ LLN INAPTQ LLGRPLIG
Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120
Query 118 NGADGGP 124
NGA+G P
Sbjct 121 NGANGLP 127
>gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=741
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 6/122 (4%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS VI PE +AAAA+D+A IGSSI A++AAAG T +LAAGADEVS AI+ LFGSHA+
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ +S Q+AA+H++F + L+A GSY SAEA N ++ +LNA+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331178|emb|CCC26860.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=632
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/127 (71%), Positives = 103/127 (82%), Gaps = 3/127 (2%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+++ PE++AAAATDLANIGSSISAA+AAAA PT ++AAG DEVS AI+ALFG+HA+
Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQ LSAQ A +H QFVRAL AG SYA AEAA VQQ LLN INAPTQ LLGRPLIG
Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120
Query 118 NGADGGP 124
NGA+G P
Sbjct 121 NGANGLP 127
>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis
CCDC5180]
Length=742
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 6/122 (4%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS VI PE +AAAA+D+A IGSSI A++AAAG T +LAAGADEVS AI+ LFGSHA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN------VQQTLLNAINAPTQTLLGRP 114
YQ +S Q+AA+H++F + L+A GSY SAEA N ++ +LNA+NAPTQ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
gi|340626780|ref|YP_004745232.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|289543587|gb|EFD47235.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
gi|340004970|emb|CCC44118.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=624
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/127 (71%), Positives = 103/127 (82%), Gaps = 3/127 (2%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+++ PE++AAAATDLANIGSSISAA+AAAA PT ++AAG DEVS AI+ALFG+HA+
Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQ LSAQ A +H QFVRAL AG SYA AEAA VQQ LLN INAPTQ LLGRPLIG
Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120
Query 118 NGADGGP 124
NGA+G P
Sbjct 121 NGANGLP 127
>gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|224990154|ref|YP_002644841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31618548|emb|CAD94500.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|224773267|dbj|BAH26073.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601697|emb|CCC64370.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ]
Length=624
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/127 (71%), Positives = 103/127 (82%), Gaps = 3/127 (2%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+++ PE++AAAATDLANIGSSISAA+AAAA PT ++AAG DEVS AI+ALFG+HA+
Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQ LSAQ A +H QFVRAL AG SYA AEAA VQQ LLN INAPTQ LLGRPLIG
Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120
Query 118 NGADGGP 124
NGA+G P
Sbjct 121 NGANGLP 127
>gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=750
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991809|ref|YP_002646498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494960|emb|CAL73446.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774924|dbj|BAH27730.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=750
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620165|emb|CAD95608.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=749
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420341|gb|EFD17542.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=592
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/127 (71%), Positives = 103/127 (82%), Gaps = 3/127 (2%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+++ PE++AAAATDLANIGSSISAA+AAAA PT ++AAG DEVS AI+ALFG+HA+
Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN---VQQTLLNAINAPTQTLLGRPLIG 117
YQ LSAQ A +H QFVRAL AG SYA AEAA VQQ LLN INAPTQ LLGRPLIG
Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120
Query 118 NGADGGP 124
NGA+G P
Sbjct 121 NGANGLP 127
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/123 (62%), Positives = 94/123 (77%), Gaps = 2/123 (1%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
M+FV+ APE++ AAA+DLANIGS+I+ A+ A A PT +LAAG DEVS AI++LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAE--AANVQQTLLNAINAPTQTLLGRPLIGN 118
YQ L A++ A+H+QFV AL AG G Y+SAE AA Q LLN +NAPTQ LLGRPLIG+
Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAD 121
GAD
Sbjct 121 GAD 123
>gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=775
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 164
Query 121 DG 122
+G
Sbjct 165 NG 166
>gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis
(strain H37RV)
gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=731
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332749|emb|CCC28470.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=724
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MSFVIA PE++AAAATDLA I S+ISAA+AAAA PT+ + AAGADEVS+AISALFG HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120
YQ LSAQ +H+QFV+AL +G YA+AE+ V+Q +LNAINAPTQTL GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 93/124 (75%), Gaps = 2/124 (1%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+VIA PE+MA AA DLA IGS +SAASA AA PT ++AAGADEVS I+ALF +HAQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN--VQQTLLNAINAPTQTLLGRPLIGN 118
YQ LSAQ AA+H+QFV L A A Y + E AN + +L A+NAPTQTLLGRPLIG+
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 119 GADG 122
GA G
Sbjct 126 GAHG 129
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 93/124 (75%), Gaps = 2/124 (1%)
Query 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60
MS+VIA PE+MA AA DLA IGS +SAASA AA PT ++AAGADEVS I+ALF +HAQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAAN--VQQTLLNAINAPTQTLLGRPLIGN 118
YQ LSAQ AA+H+QFV L A A Y + E AN + +L A+NAPTQTLLGRPLIG+
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 119 GADG 122
GA G
Sbjct 126 GAHG 129
Lambda K H
0.307 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1174401347248
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40