BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2164c
Length=384
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609301|ref|NP_216680.1| hypothetical protein Rv2164c [Mycob... 722 0.0
gi|31793344|ref|NP_855837.1| hypothetical protein Mb2188c [Mycob... 720 0.0
gi|341602084|emb|CCC64758.1| probable conserved proline rich mem... 719 0.0
gi|289443671|ref|ZP_06433415.1| conserved proline rich membrane ... 719 0.0
gi|307084821|ref|ZP_07493934.1| hypothetical protein TMLG_04124 ... 632 3e-179
gi|167966822|ref|ZP_02549099.1| conserved proline rich membrane ... 604 9e-171
gi|289758286|ref|ZP_06517664.1| LOW QUALITY PROTEIN: conserved h... 433 2e-119
gi|15827427|ref|NP_301690.1| hypothetical protein ML0907 [Mycoba... 341 1e-91
gi|240168224|ref|ZP_04746883.1| proline rich membrane protein [M... 333 3e-89
gi|183983191|ref|YP_001851482.1| proline rich membrane protein [... 330 2e-88
gi|118618803|ref|YP_907135.1| proline rich membrane protein [Myc... 326 3e-87
gi|118466986|ref|YP_881533.1| hypothetical protein MAV_2329 [Myc... 286 3e-75
gi|254821977|ref|ZP_05226978.1| hypothetical protein MintA_18737... 283 3e-74
gi|41408002|ref|NP_960838.1| hypothetical protein MAP1904c [Myco... 280 2e-73
gi|296166031|ref|ZP_06848480.1| FHA domain protein [Mycobacteriu... 260 3e-67
gi|342859876|ref|ZP_08716529.1| hypothetical protein MCOL_13393 ... 257 2e-66
gi|254775000|ref|ZP_05216516.1| hypothetical protein MaviaA2_100... 245 7e-63
gi|333990376|ref|YP_004522990.1| hypothetical protein JDM601_173... 234 1e-59
gi|169629086|ref|YP_001702735.1| hypothetical protein MAB_1999 [... 199 8e-49
gi|118469935|ref|YP_888511.1| hypothetical protein MSMEG_4234 [M... 193 3e-47
gi|108800229|ref|YP_640426.1| FHA domain-containing protein [Myc... 192 9e-47
gi|126435852|ref|YP_001071543.1| FHA domain-containing protein [... 192 9e-47
gi|315443915|ref|YP_004076794.1| hypothetical protein Mspyr1_231... 187 3e-45
gi|145223568|ref|YP_001134246.1| hypothetical protein Mflv_2981 ... 187 3e-45
gi|120404502|ref|YP_954331.1| FHA domain-containing protein [Myc... 186 6e-45
gi|336461950|gb|EGO40802.1| hypothetical protein MAPs_25580 [Myc... 155 1e-35
gi|226360237|ref|YP_002778015.1| hypothetical protein ROP_08230 ... 112 1e-22
gi|111018108|ref|YP_701080.1| hypothetical protein RHA1_ro01095 ... 111 3e-22
gi|296140349|ref|YP_003647592.1| FHA domain-containing protein [... 107 2e-21
gi|229490383|ref|ZP_04384224.1| FHA domain containing protein [R... 104 2e-20
gi|226307046|ref|YP_002767006.1| hypothetical protein RER_35590 ... 104 3e-20
gi|317506607|ref|ZP_07964399.1| hypothetical protein HMPREF9336_... 98.6 1e-18
gi|296393500|ref|YP_003658384.1| hypothetical protein Srot_1080 ... 98.6 1e-18
gi|333918991|ref|YP_004492572.1| putative conserved membrane pro... 97.8 2e-18
gi|262202916|ref|YP_003274124.1| hypothetical protein Gbro_3024 ... 96.3 7e-18
gi|54023727|ref|YP_117969.1| hypothetical protein nfa17590 [Noca... 94.4 3e-17
gi|312140149|ref|YP_004007485.1| membrane protein [Rhodococcus e... 82.4 1e-13
gi|325676970|ref|ZP_08156642.1| FHA domain protein [Rhodococcus ... 82.0 2e-13
gi|300788104|ref|YP_003768395.1| hypothetical protein AMED_6259 ... 78.6 1e-12
gi|302528476|ref|ZP_07280818.1| predicted protein [Streptomyces ... 75.1 2e-11
gi|257056485|ref|YP_003134317.1| hypothetical protein Svir_24960... 74.3 3e-11
gi|331696614|ref|YP_004332853.1| penicillin-binding protein tran... 72.0 2e-10
gi|326382553|ref|ZP_08204244.1| hypothetical protein SCNU_06425 ... 69.7 7e-10
gi|134102313|ref|YP_001107974.1| hypothetical protein SACE_5865 ... 69.3 1e-09
gi|256379772|ref|YP_003103432.1| hypothetical protein Amir_5773 ... 68.6 2e-09
gi|258654058|ref|YP_003203214.1| hypothetical protein Namu_3932 ... 67.8 3e-09
gi|343924203|ref|ZP_08763766.1| hypothetical protein GOALK_002_0... 62.4 1e-07
gi|213965287|ref|ZP_03393484.1| conserved hypothetical protein [... 49.3 0.001
gi|294812139|ref|ZP_06770782.1| Septum formation initiator [Stre... 43.9 0.049
gi|328881794|emb|CCA55033.1| hypothetical protein SVEN_1746 [Str... 42.0 0.19
>gi|15609301|ref|NP_216680.1| hypothetical protein Rv2164c [Mycobacterium tuberculosis H37Rv]
gi|15841656|ref|NP_336693.1| hypothetical protein MT2222 [Mycobacterium tuberculosis CDC1551]
gi|121638046|ref|YP_978270.1| putative proline rich membrane protein [Mycobacterium bovis BCG
str. Pasteur 1173P2]
61 more sequence titles
Length=384
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/384 (100%), Positives = 384/384 (100%), Gaps = 0/384 (0%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP
Sbjct 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN
Sbjct 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA
Sbjct 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP
Sbjct 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
Query 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP
Sbjct 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
Query 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA
Sbjct 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
Query 361 PVPANGEQFGPVTAPVPTAPGAPR 384
PVPANGEQFGPVTAPVPTAPGAPR
Sbjct 361 PVPANGEQFGPVTAPVPTAPGAPR 384
>gi|31793344|ref|NP_855837.1| hypothetical protein Mb2188c [Mycobacterium bovis AF2122/97]
gi|31618936|emb|CAD97041.1| PROBABLE CONSERVED PROLINE RICH MEMBRANE PROTEIN [Mycobacterium
bovis AF2122/97]
Length=384
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/384 (99%), Positives = 383/384 (99%), Gaps = 0/384 (0%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP
Sbjct 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN
Sbjct 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA
Sbjct 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAEAARRQGMIPTRDTAHL QDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP
Sbjct 181 PALAEAARRQGMIPTRDTAHLAQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
Query 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP
Sbjct 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
Query 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA
Sbjct 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
Query 361 PVPANGEQFGPVTAPVPTAPGAPR 384
PVPANGEQFGPVTAPVPTAPGAPR
Sbjct 361 PVPANGEQFGPVTAPVPTAPGAPR 384
>gi|341602084|emb|CCC64758.1| probable conserved proline rich membrane protein [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=384
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/384 (99%), Positives = 383/384 (99%), Gaps = 0/384 (0%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP
Sbjct 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN
Sbjct 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA
Sbjct 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPP KP
Sbjct 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPLKP 240
Query 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP
Sbjct 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
Query 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA
Sbjct 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
Query 361 PVPANGEQFGPVTAPVPTAPGAPR 384
PVPANGEQFGPVTAPVPTAPGAPR
Sbjct 361 PVPANGEQFGPVTAPVPTAPGAPR 384
>gi|289443671|ref|ZP_06433415.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
T46]
gi|289570280|ref|ZP_06450507.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
T17]
gi|289750760|ref|ZP_06510138.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
T92]
gi|289416590|gb|EFD13830.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
T46]
gi|289544034|gb|EFD47682.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
T17]
gi|289691347|gb|EFD58776.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
T92]
Length=384
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/384 (99%), Positives = 383/384 (99%), Gaps = 0/384 (0%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQ RVSRPGP
Sbjct 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQVRVSRPGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN
Sbjct 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA
Sbjct 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP
Sbjct 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
Query 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP
Sbjct 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
Query 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA
Sbjct 301 GAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPA 360
Query 361 PVPANGEQFGPVTAPVPTAPGAPR 384
PVPANGEQFGPVTAPVPTAPGAPR
Sbjct 361 PVPANGEQFGPVTAPVPTAPGAPR 384
>gi|307084821|ref|ZP_07493934.1| hypothetical protein TMLG_04124 [Mycobacterium tuberculosis SUMu012]
gi|308365612|gb|EFP54463.1| hypothetical protein TMLG_04124 [Mycobacterium tuberculosis SUMu012]
Length=336
Score = 632 bits (1631), Expect = 3e-179, Method: Compositional matrix adjust.
Identities = 336/336 (100%), Positives = 336/336 (100%), Gaps = 0/336 (0%)
Query 49 PGRQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARL 108
PGRQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARL
Sbjct 1 PGRQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARL 60
Query 109 TSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKE 168
TSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKE
Sbjct 61 TSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKE 120
Query 169 ALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNT 228
ALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNT
Sbjct 121 ALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNT 180
Query 229 KLPEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQ 288
KLPEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQ
Sbjct 181 KLPEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQ 240
Query 289 AGPQLPGPVPIPGAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGL 348
AGPQLPGPVPIPGAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGL
Sbjct 241 AGPQLPGPVPIPGAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGL 300
Query 349 SGGSQPMVAPPAPVPANGEQFGPVTAPVPTAPGAPR 384
SGGSQPMVAPPAPVPANGEQFGPVTAPVPTAPGAPR
Sbjct 301 SGGSQPMVAPPAPVPANGEQFGPVTAPVPTAPGAPR 336
>gi|167966822|ref|ZP_02549099.1| conserved proline rich membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|254551203|ref|ZP_05141650.1| hypothetical protein Mtube_12188 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294993551|ref|ZP_06799242.1| hypothetical protein Mtub2_03339 [Mycobacterium tuberculosis
210]
gi|297634754|ref|ZP_06952534.1| hypothetical protein MtubK4_11556 [Mycobacterium tuberculosis
KZN 4207]
gi|297731745|ref|ZP_06960863.1| hypothetical protein MtubKR_11678 [Mycobacterium tuberculosis
KZN R506]
gi|313659079|ref|ZP_07815959.1| hypothetical protein MtubKV_11688 [Mycobacterium tuberculosis
KZN V2475]
Length=320
Score = 604 bits (1557), Expect = 9e-171, Method: Compositional matrix adjust.
Identities = 320/320 (100%), Positives = 320/320 (100%), Gaps = 0/320 (0%)
Query 65 MLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVPF 124
MLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVPF
Sbjct 1 MLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVPF 60
Query 125 VVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAPALA 184
VVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAPALA
Sbjct 61 VVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAPALA 120
Query 185 EAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKPAAVP 244
EAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKPAAVP
Sbjct 121 EAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKPAAVP 180
Query 245 LEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIPGAPG 304
LEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIPGAPG
Sbjct 181 LEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIPGAPG 240
Query 305 PMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPAPVPA 364
PMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPAPVPA
Sbjct 241 PMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPGLSGGSQPMVAPPAPVPA 300
Query 365 NGEQFGPVTAPVPTAPGAPR 384
NGEQFGPVTAPVPTAPGAPR
Sbjct 301 NGEQFGPVTAPVPTAPGAPR 320
>gi|289758286|ref|ZP_06517664.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
gi|289713850|gb|EFD77862.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
Length=221
Score = 433 bits (1114), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 221/221 (100%), Positives = 221/221 (100%), Gaps = 0/221 (0%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP
Sbjct 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN
Sbjct 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA
Sbjct 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV
Sbjct 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
>gi|15827427|ref|NP_301690.1| hypothetical protein ML0907 [Mycobacterium leprae TN]
gi|221229904|ref|YP_002503320.1| hypothetical protein MLBr_00907 [Mycobacterium leprae Br4923]
gi|3080480|emb|CAA18675.1| hypothetical protein MLCB268.09c [Mycobacterium leprae]
gi|13092977|emb|CAC31288.1| putative conserved membrane protein [Mycobacterium leprae]
gi|219933011|emb|CAR71002.1| putative conserved membrane protein [Mycobacterium leprae Br4923]
Length=377
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 247/397 (63%), Positives = 275/397 (70%), Gaps = 33/397 (8%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
M+A+R+ P R R AA + + T N A SRR+R+ AGK SA R+ V + GP
Sbjct 1 MKAQRDTPIRRGDSGRPGGRDGAARSGKRTANEAGSRRLRTHAGKISASAREVGVPKSGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
+TSPM P +RPA +NT+QAKARAKARKAKAPK+VRP E L ARL IDLRPRTL N
Sbjct 61 RTSPMSRPVERPARPRNTTQAKARAKARKAKAPKVVRPRLGECLIARLALIDLRPRTLVN 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVI SLGVGLGLTLWLSTD+AERSYQL +ARE+ RMLQQ KEALERDVREA SA
Sbjct 121 KVPFVVLVISSLGVGLGLTLWLSTDSAERSYQLGDAREQARMLQQQKEALERDVREAESA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAE AR+QGMIPTRDTAHLVQ P GNWVVVGTPKPADGVPPPPLNTKLP+ PP KP
Sbjct 181 PALAETARKQGMIPTRDTAHLVQGPGGNWVVVGTPKPADGVPPPPLNTKLPDAGPPSLKP 240
Query 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQAGPQLPGPVPIP 300
+PLEVPVRV PGP P PPARSGP++ +R PDG TLGG HLP Q PQLPG + P
Sbjct 241 PEIPLEVPVRVVPGPGGPPPPARSGPQMWLRVPDGATTLGG-QHLP-QELPQLPGMLNGP 298
Query 301 GA-----PGPMPAPPL---GA-----VPSPAPAENPVPLQVGAAPPAGLPGPAPVAATPG 347
A PG MP P L G+ VP+PAP E PV LQ G PA +PV +T
Sbjct 299 AAAQVQVPGFMPTPGLPIPGSTMRVPVPAPAPTEVPVRLQPGLVSPAVT---SPVIST-- 353
Query 348 LSGGSQPMVAPPAPVPANGEQFGPVTAPVPTAPGAPR 384
P P P N EQFGPVTA TAPG R
Sbjct 354 ----------SPVPTPVNSEQFGPVTA---TAPGTSR 377
>gi|240168224|ref|ZP_04746883.1| proline rich membrane protein [Mycobacterium kansasii ATCC 12478]
Length=425
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 257/403 (64%), Positives = 279/403 (70%), Gaps = 44/403 (10%)
Query 23 AAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGPQTSPMLSPFDRPAPAKNTSQAK 82
AA+ R T +SA SRR SRA KT+AP R+AR+ + GPQTSPM P DRPA KNTSQAK
Sbjct 26 AASNRHTAADSA-SRR--SRASKTTAPHREARMPKSGPQTSPMPRPVDRPARPKNTSQAK 82
Query 83 ARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWL 142
ARAKARKAKAPK+VRP ERLA RL S+DLRPRTL +KVPFVVLVIGSLGVGL LTLWL
Sbjct 83 ARAKARKAKAPKVVRPKLSERLAVRLASVDLRPRTLLSKVPFVVLVIGSLGVGLALTLWL 142
Query 143 STDAAERSYQLSNARERTRMLQQHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLV 202
STDAAERSYQLS+ARERTR+LQQ KEALERDVREA SAPALAEAAR+QGMIPTRDTAHLV
Sbjct 143 STDAAERSYQLSHARERTRILQQQKEALERDVREAGSAPALAEAARKQGMIPTRDTAHLV 202
Query 203 QDPDGNWVVVGTPKPADGVPPPPLNTKL-PEDPPPPPKPAAVPLEVPVRVTPGPDDPAPP 261
Q PDGNWVVVGTPKPADGVPPPPLNTKL E PPPPP P VP EVPVRV PGP D APP
Sbjct 203 QAPDGNWVVVGTPKPADGVPPPPLNTKLPEEGPPPPPTPPVVPPEVPVRVLPGPGDQAPP 262
Query 262 ARSGPEVLVRTPDGTATLGG-ATHLPTQ------------AGPQLPGPVPIPG-APG--- 304
ARSGP+VL RTPDG +TLG + HLP Q P +PG V +PG APG
Sbjct 263 ARSGPQVLPRTPDGASTLGADSNHLPGQLPGVPGQIAVPGQAPGMPGSVAVPGQAPGVPG 322
Query 305 ------PMPAP-------PL---GAVPSPAPAENPVPLQVGA-------APPAGLPGPAP 341
+PAP PL G VP+P PAE P+PLQ G P P
Sbjct 323 QLPPQLQLPAPVGSAPAVPLQLPGQVPAPVPAEVPIPLQSGTAPPVLGAPPAPAAPVTPV 382
Query 342 VAATPGLSGGSQPMVAPPAPVPANGEQFGPVTAPVPTAPGAPR 384
A P P P P++GEQF PVT VP PG PR
Sbjct 383 APAAPAPPVSVHAPQPIPPPAPSSGEQFVPVTPTVPATPGGPR 425
>gi|183983191|ref|YP_001851482.1| proline rich membrane protein [Mycobacterium marinum M]
gi|183176517|gb|ACC41627.1| conserved proline rich membrane protein [Mycobacterium marinum
M]
Length=425
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 223/315 (71%), Positives = 249/315 (80%), Gaps = 12/315 (3%)
Query 1 MRAKREA--PKSRSSDRRRRADSPAAA--TRRTTTNSAPSRRIRSRAGKTSAPGRQARVS 56
M+AKREA P R S R + A TRRT ++ SRR+R AGK AP R+AR+
Sbjct 1 MKAKREARVPGKRQSGDRGGGRDGSVARTTRRTPADA--SRRVR--AGKKKAPNREARIP 56
Query 57 RPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPR 116
GPQT+PM P +RPA KNT QAKARAKARKAKAPK+VRP ER+A RL S+DLRP
Sbjct 57 MSGPQTTPMPRPAERPARPKNTGQAKARAKARKAKAPKVVRPKLTERMAVRLASMDLRPH 116
Query 117 TLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVRE 176
L ++VPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLS+ARERTRMLQQ KE+LERDVRE
Sbjct 117 ALLSRVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSHARERTRMLQQQKESLERDVRE 176
Query 177 AASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKL-PEDPP 235
A SAPALAEAAR+QGMIPTRDTAHLVQ PDGNWVVVGTPKPADGVPPPPLNTKL E PP
Sbjct 177 AESAPALAEAARKQGMIPTRDTAHLVQAPDGNWVVVGTPKPADGVPPPPLNTKLPEEGPP 236
Query 236 PPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLG-GATHLPTQAGPQLP 294
PPKPAA+P EVPVRV PGPDDPA R+GP++L RTPDG++TLG G HLP Q ++P
Sbjct 237 APPKPAALPPEVPVRVMPGPDDPALLPRTGPQLLPRTPDGSSTLGAGTNHLPGQPPIEIP 296
Query 295 GPVPIPGAPGPMPAP 309
G V PGAPGP+P P
Sbjct 297 GQV--PGAPGPVPLP 309
>gi|118618803|ref|YP_907135.1| proline rich membrane protein [Mycobacterium ulcerans Agy99]
gi|118570913|gb|ABL05664.1| conserved proline rich membrane protein [Mycobacterium ulcerans
Agy99]
Length=423
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 215/311 (70%), Positives = 240/311 (78%), Gaps = 4/311 (1%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
M+AKREA R + RTT + R RAGK AP R+AR+ GP
Sbjct 1 MKAKREARVPGKRQSGDRGGGRDGSVARTTRRTPADASRRGRAGKKKAPNREARIPMSGP 60
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QT+PM P +RPA KNT QAKARAKARKAKAPK+VRP ER+A RL S+DLRP L +
Sbjct 61 QTTPMPRPAERPARPKNTGQAKARAKARKAKAPKVVRPKLTERMAVRLASMDLRPHALLS 120
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
+VPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLS+ARERTRMLQQ KE+LERDVREA SA
Sbjct 121 RVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSHARERTRMLQQQKESLERDVREAESA 180
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKL-PEDPPPPPK 239
PALAEAAR+QGMIPTRDTAHLVQ PDGNWVVVGTPKPADGVPPPPLN+KL E PP PPK
Sbjct 181 PALAEAARKQGMIPTRDTAHLVQAPDGNWVVVGTPKPADGVPPPPLNSKLPEEGPPAPPK 240
Query 240 PAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGAT-HLPTQAGPQLPGPVP 298
PAA+P EVPVRV PGPDDPA R+GP++L RTPDG++TLG T HLP Q ++PG V
Sbjct 241 PAALPPEVPVRVMPGPDDPALLPRTGPQLLPRTPDGSSTLGADTNHLPGQPPIEIPGQV- 299
Query 299 IPGAPGPMPAP 309
PGAPGP+P P
Sbjct 300 -PGAPGPVPLP 309
>gi|118466986|ref|YP_881533.1| hypothetical protein MAV_2329 [Mycobacterium avium 104]
gi|118168273|gb|ABK69170.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=424
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 198/285 (70%), Positives = 224/285 (79%), Gaps = 3/285 (1%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
M+A+RE K R RR A +A R + R+R G SAP R++R +PGP
Sbjct 1 MKAERETAKRRGGSDRRGARD-GSARRGRRPAADAGAARRARGGPASAPTRESRAPKPGP 59
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QTSP+ P +R A KNTSQAKARAKARKAKAPK+VRP ERLAARL +IDLRPRTLA+
Sbjct 60 QTSPVARPAERSARPKNTSQAKARAKARKAKAPKVVRPRLTERLAARLAAIDLRPRTLAS 119
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
KVPFVVLVIG+LGVGLGLTLWLSTD+AERSY+LS+ARERTR+LQQ KEALERDVREA +A
Sbjct 120 KVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHARERTRLLQQQKEALERDVREAEAA 179
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAEAAR+QGMIPTRDTAHLVQDP GNWVVVGTPKPADGVPPPPLN+KLP++ P PPKP
Sbjct 180 PALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNSKLPDEAPQPPKP 239
Query 241 AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHL 285
A EVP+RV P P PARSGPE L+R PDG +TLGG HL
Sbjct 240 APPAAEVPIRVELAPGGPV-PARSGPEALLRAPDGASTLGG-QHL 282
>gi|254821977|ref|ZP_05226978.1| hypothetical protein MintA_18737 [Mycobacterium intracellulare
ATCC 13950]
Length=232
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/231 (78%), Positives = 201/231 (88%), Gaps = 1/231 (0%)
Query 51 RQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTS 110
R++R + GPQ+SP+ P +R A KN SQAKARAKARKAKAPK+VRP ERLAARL S
Sbjct 1 RESRAPKAGPQSSPVARPVERSARPKNASQAKARAKARKAKAPKVVRPKLTERLAARLAS 60
Query 111 IDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEAL 170
IDLRPRTLA+KVPFVVLVIG+LGVGLGLTLWLSTD+AERSY+LS+ARERTR+LQQ KEAL
Sbjct 61 IDLRPRTLASKVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHARERTRLLQQQKEAL 120
Query 171 ERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKL 230
ERDVREA +APALAEAAR+QGMIPTRDTAHLVQDP GNWVVVGTPKPADGVPPPPLNTKL
Sbjct 121 ERDVREAEAAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNTKL 180
Query 231 PEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGG 281
P++ P PPKPAA EVP+R+ P P PA PARSGPE L+R PDG +T+GG
Sbjct 181 PDEAPQPPKPAAPAAEVPMRLEPVPGAPA-PARSGPEALLRAPDGASTVGG 230
>gi|41408002|ref|NP_960838.1| hypothetical protein MAP1904c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396356|gb|AAS04221.1| hypothetical protein MAP_1904c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=425
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/237 (77%), Positives = 204/237 (87%), Gaps = 2/237 (0%)
Query 49 PGRQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARL 108
P R++R +PGPQTSP+ P +R A +NTSQAKARAKARKAKAPK+VRP ERLAARL
Sbjct 49 PARESRAPKPGPQTSPVARPAERSARPRNTSQAKARAKARKAKAPKVVRPRLTERLAARL 108
Query 109 TSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKE 168
+IDLRPRTLA+KVPFVVLVIG+LGVGLGLTLWLSTD+AERSY+LS+ARERTR+LQQ KE
Sbjct 109 AAIDLRPRTLASKVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHARERTRLLQQQKE 168
Query 169 ALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNT 228
ALERDVREA +APALAEAAR+QGMIPTRDTAHLVQDP GNWVVVGTPKPADGVPPPPLN+
Sbjct 169 ALERDVREAEAAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNS 228
Query 229 KLPEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHL 285
KLP++ P PPKPA EVP+RV P P P PARSGPE L+R PDG +TLGG HL
Sbjct 229 KLPDEAPQPPKPAPPAAEVPIRVEPAPGGPV-PARSGPEALLRAPDGASTLGG-QHL 283
>gi|296166031|ref|ZP_06848480.1| FHA domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898596|gb|EFG78153.1| FHA domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=187
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/186 (81%), Positives = 161/186 (87%), Gaps = 4/186 (2%)
Query 111 IDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEAL 170
IDLRPRTLA++VPFVVLVIG+LGVGLGLTLWLSTD+AERSY+LS+ARE+TR+LQQ KEAL
Sbjct 2 IDLRPRTLASRVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHAREKTRLLQQQKEAL 61
Query 171 ERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKL 230
ERDVREA SAPALAEAAR+QGMIPTRDTAHLVQDP GNWVVVGTPKPADGVPPPPLN+KL
Sbjct 62 ERDVREAESAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNSKL 121
Query 231 PED-PPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHLPTQA 289
PE PPPPP P A LEVPVRV P PARSGPE L+R PDG +TLGG HL Q
Sbjct 122 PEQGPPPPPAPPAPQLEVPVRVQP-APGAPAPARSGPEALLRAPDGASTLGG-QHL-GQT 178
Query 290 GPQLPG 295
GPQLPG
Sbjct 179 GPQLPG 184
>gi|342859876|ref|ZP_08716529.1| hypothetical protein MCOL_13393 [Mycobacterium colombiense CECT
3035]
gi|342133008|gb|EGT86228.1| hypothetical protein MCOL_13393 [Mycobacterium colombiense CECT
3035]
Length=428
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 199/286 (70%), Positives = 230/286 (81%), Gaps = 5/286 (1%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAA-TRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPG 59
MRA+RE K R RR +A + R T S +RR +R G+T+AP R+AR + G
Sbjct 1 MRAERETSKRRGGSDRRGGRDGSARRSSRPTAESGSARR--ARGGRTTAPAREARAPKSG 58
Query 60 PQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLA 119
PQTSP P +RPA K+TSQAKARAKARKAKAPK+VRP ERLAARL +IDLRPRTLA
Sbjct 59 PQTSPFARPVERPARPKSTSQAKARAKARKAKAPKVVRPRLTERLAARLAAIDLRPRTLA 118
Query 120 NKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAAS 179
+KVPFVVL+IG+LG+GLGLTLWLSTD+AERSY+LS+ARERTR+LQQ KEALERDVREA +
Sbjct 119 SKVPFVVLIIGALGLGLGLTLWLSTDSAERSYKLSHARERTRLLQQQKEALERDVREAEA 178
Query 180 APALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPK 239
APALAEAAR+QGMIP+RDTAHLVQDP GNWVVVGTPKPADGVPPPPLN+KLP++ P PPK
Sbjct 179 APALAEAARKQGMIPSRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNSKLPDEAPQPPK 238
Query 240 PAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGATHL 285
P A P EV +R+ P P PA PARSGPE L+R PDG +TLGG HL
Sbjct 239 PPAAPPEVSMRLEPAPGGPA-PARSGPEALLRAPDGASTLGG-QHL 282
>gi|254775000|ref|ZP_05216516.1| hypothetical protein MaviaA2_10049 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=182
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/183 (80%), Positives = 161/183 (88%), Gaps = 1/183 (0%)
Query 98 PTPMERLAARLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNAR 157
P ERLAARL +IDLRPRTLA+KVPFVVLVIG+LGVGLGLTLWLSTD+AERSY+LS+AR
Sbjct 1 PRLTERLAARLAAIDLRPRTLASKVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHAR 60
Query 158 ERTRMLQQHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKP 217
ERTR+LQQ KEALERDVREA +APALAEAAR+QGMIPTRDTAHLVQDP GNWVVVGTPKP
Sbjct 61 ERTRLLQQQKEALERDVREAEAAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKP 120
Query 218 ADGVPPPPLNTKLPEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTA 277
ADGVPPPPLN+KLP++ P PPKPA EVP+RV P P P PARSGPE L+R PDG +
Sbjct 121 ADGVPPPPLNSKLPDEAPQPPKPAPPAAEVPIRVEPAPGGPV-PARSGPEALLRAPDGAS 179
Query 278 TLG 280
TLG
Sbjct 180 TLG 182
>gi|333990376|ref|YP_004522990.1| hypothetical protein JDM601_1736 [Mycobacterium sp. JDM601]
gi|333486344|gb|AEF35736.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=275
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/190 (77%), Positives = 155/190 (82%), Gaps = 6/190 (3%)
Query 65 MLSPFD-RPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVP 123
MLS D RP P KNT QAKARAKARKAKAPK+VR ERL RL SIDLRPR+LA KVP
Sbjct 1 MLSRTDARPVPPKNTKQAKARAKARKAKAPKVVRVPLRERLITRLASIDLRPRSLAAKVP 60
Query 124 FVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAPAL 183
FVVL+IGSLG+GLG+TLWLSTDAAERSYQL N RER R+L Q KEALERDV A SAPAL
Sbjct 61 FVVLIIGSLGIGLGITLWLSTDAAERSYQLGNIRERNRVLLQQKEALERDVLTAESAPAL 120
Query 184 AEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKPAAV 243
AEAAR GMIPTRDTAHLVQDP GNWVVVG PKPA+GVPPPPLNTKLP++ +PA
Sbjct 121 AEAARELGMIPTRDTAHLVQDPAGNWVVVGQPKPAEGVPPPPLNTKLPDE-----QPATP 175
Query 244 PLEVPVRVTP 253
P EVPVRV P
Sbjct 176 PAEVPVRVPP 185
>gi|169629086|ref|YP_001702735.1| hypothetical protein MAB_1999 [Mycobacterium abscessus ATCC 19977]
gi|169241053|emb|CAM62081.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=323
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 124/213 (59%), Positives = 150/213 (71%), Gaps = 8/213 (3%)
Query 32 NSAPSRRIRSRAGKTSAPGRQARVSRPGPQTSPMLSPFDRPAPAK-----NTSQAKARAK 86
++ P++R R+ A K +A G AR R PQT P+ P R AP K +T QAKARAK
Sbjct 20 SAKPTKR-RNGASKATATGPSARPRRSAPQTMPI--PVQRQAPEKIRPATSTRQAKARAK 76
Query 87 ARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDA 146
ARKAKAPK++R ER+ ARL+ +DLRP +VPFVV VIG+LGVGL +TLWLSTDA
Sbjct 77 ARKAKAPKVIRVPLRERVLARLSEVDLRPHVWITRVPFVVFVIGALGVGLAITLWLSTDA 136
Query 147 AERSYQLSNARERTRMLQQHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPD 206
AERSYQL R L Q KEALERDV A SAPALA++AR GMIP+RD AHLV+DP
Sbjct 137 AERSYQLGTQRRTNEELLQRKEALERDVLRAESAPALADSARDLGMIPSRDIAHLVRDPQ 196
Query 207 GNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPK 239
GNW++VG PKPA+GV P PLN+ +P+D PK
Sbjct 197 GNWLLVGAPKPAEGVAPAPLNSVIPDDADAVPK 229
>gi|118469935|ref|YP_888511.1| hypothetical protein MSMEG_4234 [Mycobacterium smegmatis str.
MC2 155]
gi|118171222|gb|ABK72118.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=380
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 201/403 (50%), Positives = 229/403 (57%), Gaps = 51/403 (12%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
M+AKR P R +DRRR P A R + + P +R SR + R R P
Sbjct 1 MKAKRPGP-VRDADRRRGKRQPGVA--RGSAEAPPRKRRPSREPQ--------RPLRSAP 49
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QT P+ PA K SQAKARAKARKAKAPK+VRP ER+ RL+SI+L PR L
Sbjct 50 QTGPIPRQKTEPARPKTASQAKARAKARKAKAPKVVRPPLRERILLRLSSIELNPRELVA 109
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
+VPFVVLVI +LG+GLG+TLWLST AAERSYQL +AR+ + L Q KEALERDV EA +A
Sbjct 110 RVPFVVLVIAALGLGLGITLWLSTSAAERSYQLGHARQVNQGLLQQKEALERDVLEAQAA 169
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKP 240
PALAEAAR GMIP+RDTAHLVQDP GNWVVVGTPKPA+GVPPPPLN LP D PPPP
Sbjct 170 PALAEAARNLGMIPSRDTAHLVQDPTGNWVVVGTPKPAEGVPPPPLNAPLPPDAPPPPPA 229
Query 241 -----AAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGGAT-----HLPTQAG 290
P EVP+RV P+ P G + P + GA H+ A
Sbjct 230 PPAPRVVEPREVPIRV---PEAPGLQGLPGIQAAPGIPGAVQGVPGAVPGETPHVAPGAQ 286
Query 291 PQLPGPVPIPGAPGPMPAPPLGAVPSPAPAE-----------------NPVPLQVGAAPP 333
PQ PGPV GP+ P AVP P PAE P P QV A P
Sbjct 287 PQAPGPV-----IGPLTGPAPMAVPMPVPAEVPLATPQAPQQAAPLVNTPAPQQVPA--P 339
Query 334 AGLPGPAPVAATPGLSGGSQPMVAPPAPVPANGEQFGPVTAPV 376
A LPG P A G G+QP V PA E F P APV
Sbjct 340 APLPGAVPQGAPLGALPGAQPAVPDPA---TAVEHFSPAVAPV 379
>gi|108800229|ref|YP_640426.1| FHA domain-containing protein [Mycobacterium sp. MCS]
gi|119869357|ref|YP_939309.1| FHA domain-containing protein [Mycobacterium sp. KMS]
gi|108770648|gb|ABG09370.1| FHA domain containing protein [Mycobacterium sp. MCS]
gi|119695446|gb|ABL92519.1| FHA domain containing protein [Mycobacterium sp. KMS]
Length=370
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/221 (63%), Positives = 159/221 (72%), Gaps = 8/221 (3%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
M+AKR AP R +RRR P T R +AP R R T GR R SR P
Sbjct 1 MKAKRSAP-VRGEERRRAPRQPVRKTARRGVEAAP----RPRRTPT---GRPTRDSRSAP 52
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QT+P+ P + PA KN +QAKARAKARKAKAPK+VRP ERL +L++I+L P+ L
Sbjct 53 QTAPIARPAELPARPKNATQAKARAKARKAKAPKVVRPPLRERLLIKLSTIELNPKALIA 112
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
+VPFVVLVIGSLG+GLG+TLWLST AAERSYQL AR+ + L Q KEALERDV EA +A
Sbjct 113 RVPFVVLVIGSLGLGLGITLWLSTGAAERSYQLGAARQTNQALAQQKEALERDVLEAQAA 172
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
PALAEAAR GMIP+RDTAHLVQDP GNWVVVGTPKPA+GV
Sbjct 173 PALAEAARNLGMIPSRDTAHLVQDPAGNWVVVGTPKPAEGV 213
>gi|126435852|ref|YP_001071543.1| FHA domain-containing protein [Mycobacterium sp. JLS]
gi|126235652|gb|ABN99052.1| FHA domain containing protein [Mycobacterium sp. JLS]
Length=337
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 136/221 (62%), Positives = 158/221 (72%), Gaps = 8/221 (3%)
Query 1 MRAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGP 60
M+AKR AP R +RRR P T R +AP R + GR R SR P
Sbjct 1 MKAKRSAP-VRGEERRRAPRQPVRKTARRGVEAAPRPR-------RTPTGRPTRDSRSAP 52
Query 61 QTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLAN 120
QT+P+ P + PA KN +QAKARAKARKAKAPK+VRP ERL +L++I+L P+ L
Sbjct 53 QTAPIARPAELPARPKNATQAKARAKARKAKAPKVVRPPLRERLLIKLSTIELNPKALIA 112
Query 121 KVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASA 180
+VPFVVLVIGSLG+GLG+TLWLST AAERSYQL AR+ + L Q KEALERDV EA +A
Sbjct 113 RVPFVVLVIGSLGLGLGITLWLSTGAAERSYQLGAARQTNQALAQQKEALERDVLEAQAA 172
Query 181 PALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
PALAEAAR GMIP+RDTAHLVQDP GNWVVVGTPKPA+GV
Sbjct 173 PALAEAARNLGMIPSRDTAHLVQDPAGNWVVVGTPKPAEGV 213
>gi|315443915|ref|YP_004076794.1| hypothetical protein Mspyr1_23140 [Mycobacterium sp. Spyr1]
gi|315262218|gb|ADT98959.1| hypothetical protein Mspyr1_23140 [Mycobacterium sp. Spyr1]
Length=336
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/171 (71%), Positives = 137/171 (81%), Gaps = 0/171 (0%)
Query 51 RQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTS 110
R AR R P+T+P+ P D PA K+ +QAKARAKARKAKAPK+VRP ERL RL S
Sbjct 60 RDARPQRSAPRTTPISRPVDAPARPKSATQAKARAKARKAKAPKVVRPPLRERLLVRLAS 119
Query 111 IDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEAL 170
IDL PR LA +VPFVVL+I +LG+GLG+TLWLSTDAAERSYQL +AR+ + L Q KEAL
Sbjct 120 IDLNPRRLAARVPFVVLIISALGLGLGVTLWLSTDAAERSYQLGSARQLNQALMQQKEAL 179
Query 171 ERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
ERDV EA +APALAEAAR GMIP+RDTAHLVQD GNWVVVGTPKPA+GV
Sbjct 180 ERDVLEAQAAPALAEAARELGMIPSRDTAHLVQDASGNWVVVGTPKPAEGV 230
>gi|145223568|ref|YP_001134246.1| hypothetical protein Mflv_2981 [Mycobacterium gilvum PYR-GCK]
gi|145216054|gb|ABP45458.1| hypothetical protein Mflv_2981 [Mycobacterium gilvum PYR-GCK]
Length=338
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/171 (71%), Positives = 137/171 (81%), Gaps = 0/171 (0%)
Query 51 RQARVSRPGPQTSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTS 110
R AR R P+T+P+ P D PA K+ +QAKARAKARKAKAPK+VRP ERL RL S
Sbjct 60 RDARPQRSAPRTTPISRPVDAPARPKSATQAKARAKARKAKAPKVVRPPLRERLLVRLAS 119
Query 111 IDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEAL 170
IDL PR LA +VPFVVL+I +LG+GLG+TLWLSTDAAERSYQL +AR+ + L Q KEAL
Sbjct 120 IDLNPRRLAARVPFVVLIISALGLGLGVTLWLSTDAAERSYQLGSARQLNQALMQQKEAL 179
Query 171 ERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
ERDV EA +APALAEAAR GMIP+RDTAHLVQD GNWVVVGTPKPA+GV
Sbjct 180 ERDVLEAQAAPALAEAARELGMIPSRDTAHLVQDASGNWVVVGTPKPAEGV 230
>gi|120404502|ref|YP_954331.1| FHA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119957320|gb|ABM14325.1| FHA domain containing protein [Mycobacterium vanbaalenii PYR-1]
Length=335
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 153/252 (61%), Positives = 179/252 (72%), Gaps = 15/252 (5%)
Query 2 RAKREAPKSRSSDRRRRADSPAAATRRTTTNSAPSRRIRSRAGKTSAPGRQARVSRPGPQ 61
RA+ A KS + +RR P T+RT ++ P R ++ R AR R P+
Sbjct 17 RARTSAKKSPRAAKRR----PVRETKRTPVDAPPRGRQQT---------RDARPQRSAPR 63
Query 62 TSPMLSPFDRPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANK 121
T+P+ P D PA K+TSQAKARAKARKAKAPK+VRP +R+ RL SI+L PR L +
Sbjct 64 TTPIARPKDVPARPKSTSQAKARAKARKAKAPKVVRPPLRQRILVRLASIELDPRRLIAR 123
Query 122 VPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAP 181
VPFVVLVIG+LG+GLG+TLWLSTDAAERSYQL AR+ + L Q KE LERDV EA +AP
Sbjct 124 VPFVVLVIGALGLGLGVTLWLSTDAAERSYQLGAARQLNQALLQQKEGLERDVLEAQAAP 183
Query 182 ALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPPPKPA 241
ALAEAAR GMIP+RDTAHLVQDP GNWVVVGTPKPA+GVPPPPLN LPE PP P
Sbjct 184 ALAEAARNLGMIPSRDTAHLVQDPSGNWVVVGTPKPAEGVPPPPLNAPLPEPAPPAPPAP 243
Query 242 AV--PLEVPVRV 251
V PLEVPVR+
Sbjct 244 RVIEPLEVPVRL 255
>gi|336461950|gb|EGO40802.1| hypothetical protein MAPs_25580 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=264
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/124 (77%), Positives = 103/124 (84%), Gaps = 2/124 (1%)
Query 162 MLQQHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGV 221
MLQQ KEALERDVREA +APALAEAAR+QGMIPTRDTAHLVQDP GNWVVVGTPKPADGV
Sbjct 1 MLQQQKEALERDVREAEAAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGV 60
Query 222 PPPPLNTKLPEDPPPPPKPAAVPLEVPVRVTPGPDDPAPPARSGPEVLVRTPDGTATLGG 281
PPPPLN+KLP++ P P KPA EVP+RV P P P PARSGPE L+R PDG +TLGG
Sbjct 61 PPPPLNSKLPDEAPQPSKPAPPAAEVPIRVEPAPGGPV-PARSGPEALLRAPDGASTLGG 119
Query 282 ATHL 285
HL
Sbjct 120 -QHL 122
>gi|226360237|ref|YP_002778015.1| hypothetical protein ROP_08230 [Rhodococcus opacus B4]
gi|226238722|dbj|BAH49070.1| hypothetical protein [Rhodococcus opacus B4]
Length=225
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/161 (45%), Positives = 90/161 (56%), Gaps = 6/161 (3%)
Query 71 RPAPAKNTSQAKARAKARKAKAPKLVRPTPMERLAARLTSIDLRPRTLANKVPFVVLVIG 130
RPA A N S A RA ++ + + +A S R TL ++PFV ++
Sbjct 11 RPARADNRSGAAERAYKKR------TQRAAVHNGSAIAVSGKNRTGTLTARIPFVATILV 64
Query 131 SLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAPALAEAARRQ 190
L GL +TL L+T +AE SYQLS AR + L + K AL+RDV A SAP LAE A +
Sbjct 65 LLATGLAVTLLLTTRSAEDSYQLSAARAHNQSLAEEKAALQRDVETANSAPKLAEEAAKL 124
Query 191 GMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLP 231
GM+P D A LV PDG+ VVGTP PA G P PPL+ P
Sbjct 125 GMVPANDPARLVVHPDGSVEVVGTPAPASGAPVPPLDAAAP 165
>gi|111018108|ref|YP_701080.1| hypothetical protein RHA1_ro01095 [Rhodococcus jostii RHA1]
gi|110817638|gb|ABG92922.1| possible conserved membrane protein [Rhodococcus jostii RHA1]
Length=225
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 75/118 (64%), Gaps = 0/118 (0%)
Query 114 RPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERD 173
R TL ++PFV ++ L +GL +TL L+T +AE SYQLS AR + L + K AL+RD
Sbjct 48 RAGTLTARIPFVATILVLLAMGLAMTLLLTTRSAEDSYQLSAARAHNQSLAEEKAALQRD 107
Query 174 VREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLP 231
V A SAP LAE A + GM+P D A LV PDG+ VVG P PA G P PPL+ +P
Sbjct 108 VETANSAPKLAEEAAKLGMVPANDPARLVVHPDGSVEVVGKPAPASGAPVPPLDVAVP 165
>gi|296140349|ref|YP_003647592.1| FHA domain-containing protein [Tsukamurella paurometabola DSM
20162]
gi|296028483|gb|ADG79253.1| FHA domain-containing protein [Tsukamurella paurometabola DSM
20162]
Length=294
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/141 (48%), Positives = 76/141 (54%), Gaps = 9/141 (6%)
Query 96 VRPTPMERLAAR---------LTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDA 146
VR T ER R LT + P LA +VPFV+ VIG +G GL LTLWLST +
Sbjct 60 VRETSAERALRRHREGPAPALLTRLPKAPAALARRVPFVLTVIGLVGAGLVLTLWLSTGS 119
Query 147 AERSYQLSNARERTRMLQQHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPD 206
AE SY LS L + K ALERDV+ SAP LAE A GM+P LV PD
Sbjct 120 AENSYDLSRREAVNDTLAEKKAALERDVKAGESAPGLAERATELGMVPAGTLPVLVTAPD 179
Query 207 GNWVVVGTPKPADGVPPPPLN 227
G +VG P PA G P P LN
Sbjct 180 GKVTLVGKPAPATGSPKPALN 200
>gi|229490383|ref|ZP_04384224.1| FHA domain containing protein [Rhodococcus erythropolis SK121]
gi|229322673|gb|EEN88453.1| FHA domain containing protein [Rhodococcus erythropolis SK121]
Length=214
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/110 (53%), Positives = 70/110 (64%), Gaps = 0/110 (0%)
Query 118 LANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREA 177
L +VPFV VIG L +GL +TL L+T AAE SYQLS+AR + L + K ALERD +
Sbjct 41 LKGRVPFVASVIGLLSIGLAVTLLLTTRAAEDSYQLSDARAYNQSLVEQKAALERDFQSR 100
Query 178 ASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLN 227
SAP LA A GM+P +D A LV PDG+ VVGTP PA PPL+
Sbjct 101 NSAPELANQASALGMVPAKDPARLVVHPDGSVEVVGTPTPATAGAMPPLD 150
>gi|226307046|ref|YP_002767006.1| hypothetical protein RER_35590 [Rhodococcus erythropolis PR4]
gi|226186163|dbj|BAH34267.1| hypothetical protein RER_35590 [Rhodococcus erythropolis PR4]
Length=214
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/110 (53%), Positives = 70/110 (64%), Gaps = 0/110 (0%)
Query 118 LANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREA 177
L +VPFV VIG L +GL +TL L+T AAE SYQLS+AR + L + K ALERD +
Sbjct 41 LKGRVPFVASVIGLLSIGLAVTLLLTTRAAEDSYQLSDARAYNQSLVEQKAALERDFQSR 100
Query 178 ASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLN 227
SAP LA A GM+P +D A LV PDG+ VVGTP PA PPL+
Sbjct 101 NSAPELANQASALGMVPAKDPARLVVHPDGSVEVVGTPTPATAGAMPPLD 150
>gi|317506607|ref|ZP_07964399.1| hypothetical protein HMPREF9336_00769 [Segniliparus rugosus ATCC
BAA-974]
gi|316255116|gb|EFV14394.1| hypothetical protein HMPREF9336_00769 [Segniliparus rugosus ATCC
BAA-974]
Length=328
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 66/112 (59%), Gaps = 0/112 (0%)
Query 116 RTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVR 175
R L +VPFV+ VIG L VGL TLWL+T + E + LS R R LQQ KE LERD+
Sbjct 78 RELLRRVPFVIGVIGLLAVGLAATLWLATRSTEDASTLSAMRLHNRELQQEKERLERDME 137
Query 176 EAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLN 227
S LA A GM+P +D A LV PDG+ VVG KPA+G P PL
Sbjct 138 RGQSVTELARRAGDLGMVPAQDVAKLVPQPDGSVQVVGQLKPAEGGPERPLE 189
>gi|296393500|ref|YP_003658384.1| hypothetical protein Srot_1080 [Segniliparus rotundus DSM 44985]
gi|296180647|gb|ADG97553.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=318
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/112 (49%), Positives = 66/112 (59%), Gaps = 0/112 (0%)
Query 116 RTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVR 175
R L +VPFV+ V+G L VGL TLWL+T + E + LS R R LQQ +E LERD+
Sbjct 51 RELLRRVPFVIGVMGLLAVGLVATLWLATRSTEDASTLSAMRGHNRELQQEQERLERDME 110
Query 176 EAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLN 227
S LA A GM+P RD A V PDG+ VVG KPA+G P PL+
Sbjct 111 RGQSVTELARRAGELGMVPARDVAKFVPQPDGSVQVVGDLKPAEGAPEVPLD 162
>gi|333918991|ref|YP_004492572.1| putative conserved membrane protein [Amycolicicoccus subflavus
DQS3-9A1]
gi|333481212|gb|AEF39772.1| Possible conserved membrane protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=231
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/156 (40%), Positives = 86/156 (56%), Gaps = 16/156 (10%)
Query 111 IDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEAL 170
D+R + A+++PFV L+I L GL LTL LST AA+++YQ++ A+ + L + +EAL
Sbjct 51 FDMREK--ASRIPFVALIIAMLVGGLALTLLLSTQAAQQAYQITEAKMEYKKLAEEREAL 108
Query 171 ERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKL 230
RDV SAP LA A +GMIP D A+L DG+ ++G P+ A G P PP N
Sbjct 109 RRDVERGRSAPELARLASEEGMIPAPDPAYLRVARDGSVNLIGEPRVAQGAPLPPFNI-- 166
Query 231 PEDPP----------PPPKPAAVPLEVPVRVTPGPD 256
DP P + V + +PV PGP+
Sbjct 167 --DPQRRDLTGPLSGSPEREIEVAIPIPVDELPGPE 200
>gi|262202916|ref|YP_003274124.1| hypothetical protein Gbro_3024 [Gordonia bronchialis DSM 43247]
gi|262086263|gb|ACY22231.1| hypothetical protein Gbro_3024 [Gordonia bronchialis DSM 43247]
Length=266
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/114 (49%), Positives = 69/114 (61%), Gaps = 0/114 (0%)
Query 116 RTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVR 175
R +PFVV VI L GLGL+LWLST AA+ SY+L R+ + L +AL+RD
Sbjct 71 REQLRHIPFVVPVILILVFGLGLSLWLSTRAAQDSYELGVQRKTNQSLNDQVDALKRDYE 130
Query 176 EAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTK 229
SAP LA A + GMIP ++ A +V +P VVGTP PA GVP PPLN +
Sbjct 131 SGDSAPELAYKAAQLGMIPAQNPARMVVEPGKRPRVVGTPTPATGVPMPPLNKR 184
>gi|54023727|ref|YP_117969.1| hypothetical protein nfa17590 [Nocardia farcinica IFM 10152]
gi|54015235|dbj|BAD56605.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=293
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/144 (51%), Positives = 87/144 (61%), Gaps = 2/144 (1%)
Query 118 LANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREA 177
+A ++PFV +I LG GL LTL L+T AAE SYQLS+AR+ R L + + AL+R+V A
Sbjct 19 MAGRIPFVAAIIALLGCGLALTLLLTTRAAEDSYQLSDARQLNRKLTEERAALQREVEAA 78
Query 178 ASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTKLPEDPPPP 237
SAP LA AR GMIP +D A LV PDG V+G P PA G P PPLNT P DP P
Sbjct 79 DSAPELAARARELGMIPAKDPARLVIAPDGTVTVIGDPTPAQGAPAPPLNTT-PADPSRP 137
Query 238 PKPAAVPLEVPVRVTPGPDDPAPP 261
P + VPV P PA P
Sbjct 138 GAPQGERV-VPVTAVATPQHPAAP 160
>gi|312140149|ref|YP_004007485.1| membrane protein [Rhodococcus equi 103S]
gi|311889488|emb|CBH48805.1| putative membrane protein [Rhodococcus equi 103S]
Length=230
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/121 (44%), Positives = 77/121 (64%), Gaps = 0/121 (0%)
Query 107 RLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQH 166
R+TS+ P+ + ++PFV +IG L +GL TL L+T +AE SY+L+ R + L++
Sbjct 44 RVTSVVTTPKDVVARIPFVATIIGLLCLGLAATLLLTTRSAEDSYELAATRAHNQTLREQ 103
Query 167 KEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPL 226
L+R+V SAP LA+ A G+IP +D A L+Q DG+ VVGTPKPA+G P PL
Sbjct 104 AVDLKREVEAGNSAPVLAQKAAELGLIPAKDPARLLQASDGSVQVVGTPKPAEGKPVAPL 163
Query 227 N 227
+
Sbjct 164 D 164
>gi|325676970|ref|ZP_08156642.1| FHA domain protein [Rhodococcus equi ATCC 33707]
gi|325552270|gb|EGD21960.1| FHA domain protein [Rhodococcus equi ATCC 33707]
Length=230
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/121 (43%), Positives = 77/121 (64%), Gaps = 0/121 (0%)
Query 107 RLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQH 166
R+TS+ P+ + ++PFV +IG L +GL TL L+T +AE SY+L+ R + L++
Sbjct 44 RVTSVVTTPKDVVARIPFVATIIGLLCLGLAATLLLTTRSAEDSYELAATRAHNQTLREQ 103
Query 167 KEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPL 226
L+R+V SAP LA+ A G+IP +D A L+Q DG+ V+GTPKPA+G P PL
Sbjct 104 AVDLKREVEAGNSAPVLAQKAAELGLIPAKDPARLLQASDGSVQVIGTPKPAEGKPVAPL 163
Query 227 N 227
+
Sbjct 164 D 164
>gi|300788104|ref|YP_003768395.1| hypothetical protein AMED_6259 [Amycolatopsis mediterranei U32]
gi|299797618|gb|ADJ47993.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340529689|gb|AEK44894.1| hypothetical protein RAM_32105 [Amycolatopsis mediterranei S699]
Length=243
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/99 (42%), Positives = 59/99 (60%), Gaps = 0/99 (0%)
Query 120 NKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAAS 179
++ FV++++ L G+ TLWL+T A SY+L R L + KE L+RDV +A S
Sbjct 98 SRASFVLMMMALLAAGVATTLWLTTQAIADSYRLEQLRTTNAKLAEQKEQLQRDVAKAES 157
Query 180 APALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPA 218
+LA AA++ GM+P D A +V PDG +VG PK A
Sbjct 158 PASLAPAAQQLGMVPGGDPARIVVGPDGKTSLVGEPKKA 196
>gi|302528476|ref|ZP_07280818.1| predicted protein [Streptomyces sp. AA4]
gi|302437371|gb|EFL09187.1| predicted protein [Streptomyces sp. AA4]
Length=218
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/106 (42%), Positives = 62/106 (59%), Gaps = 0/106 (0%)
Query 113 LRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALER 172
LR R ++ FV++++G L VG+ TLW +T A SY+L R L + K+ LER
Sbjct 75 LRLRWPRSRASFVLVMMGLLAVGVAATLWFTTQAIADSYRLEKLRTDNASLMETKDRLER 134
Query 173 DVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPA 218
+V +A S +LA AA++ GM+P D A +V DG VVG PK A
Sbjct 135 EVAKAQSPASLAPAAKQLGMVPGGDPARIVVGKDGKTTVVGEPKKA 180
>gi|257056485|ref|YP_003134317.1| hypothetical protein Svir_24960 [Saccharomonospora viridis DSM
43017]
gi|256586357|gb|ACU97490.1| hypothetical protein Svir_24960 [Saccharomonospora viridis DSM
43017]
Length=163
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (58%), Gaps = 0/110 (0%)
Query 120 NKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAAS 179
++ FVV+++G + G+ +LWLST A SY+L RE+ L +H E L R+V + S
Sbjct 20 SRATFVVILMGLMLCGVAASLWLSTQAIADSYRLERLREQNAQLAEHAEQLRREVGQLQS 79
Query 180 APALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLNTK 229
+LAE A+ GM+P + A LV DG+ VVG P A PPP T+
Sbjct 80 PSSLAERAKSLGMVPGGNPARLVVGEDGSITVVGEPVKATAPAPPPEKTE 129
>gi|331696614|ref|YP_004332853.1| penicillin-binding protein transpeptidase [Pseudonocardia dioxanivorans
CB1190]
gi|326951303|gb|AEA25000.1| penicillin-binding protein transpeptidase [Pseudonocardia dioxanivorans
CB1190]
Length=928
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 0/100 (0%)
Query 119 ANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAA 178
A + FV+LV+ L GL TLWLST AA SY+L +A RTR L + E L + V
Sbjct 90 AGRAQFVLLVMVLLAAGLVATLWLSTAAAADSYRLQDAGTRTRDLTEQSEMLRKQVAALD 149
Query 179 SAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPA 218
+APALA+ A + GM+P D A LV DG+ VVGTP A
Sbjct 150 AAPALAQRATQLGMVPADDPARLVVAADGSVTVVGTPAAA 189
>gi|326382553|ref|ZP_08204244.1| hypothetical protein SCNU_06425 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198672|gb|EGD55855.1| hypothetical protein SCNU_06425 [Gordonia neofelifaecis NRRL
B-59395]
Length=265
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/106 (42%), Positives = 65/106 (62%), Gaps = 4/106 (3%)
Query 122 VPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAASAP 181
VP ++LV+G+L LTL+L+T +A+ SY + R+ + LQ L+ AP
Sbjct 68 VPILMLVLGALA----LTLFLTTKSAQDSYAIDALRKENQELQARASELKAASDAGDQAP 123
Query 182 ALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLN 227
A+A+AA RQGM+P +++A ++ PDG + GTP PADG P P LN
Sbjct 124 AIAKAAARQGMVPAQNSAEIIIGPDGKARLRGTPTPADGSPLPDLN 169
>gi|134102313|ref|YP_001107974.1| hypothetical protein SACE_5865 [Saccharopolyspora erythraea NRRL
2338]
gi|291003725|ref|ZP_06561698.1| hypothetical protein SeryN2_04307 [Saccharopolyspora erythraea
NRRL 2338]
gi|133914936|emb|CAM05049.1| hypothetical protein SACE_5865 [Saccharopolyspora erythraea NRRL
2338]
Length=234
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/98 (40%), Positives = 51/98 (53%), Gaps = 0/98 (0%)
Query 116 RTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVR 175
R +++P VV+ + L GL TLWLS A SY+L L + KE L DV
Sbjct 87 RVAGSRLPLVVVSMSLLATGLVATLWLSIAAVSGSYRLQQGEAELTALNEQKERLMLDVN 146
Query 176 EAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVG 213
S PAL AA +G++P AHLV +PDG V+G
Sbjct 147 ARNSTPALQRAAAAEGLVPAPQAAHLVTNPDGTVSVIG 184
>gi|256379772|ref|YP_003103432.1| hypothetical protein Amir_5773 [Actinosynnema mirum DSM 43827]
gi|255924075|gb|ACU39586.1| hypothetical protein Amir_5773 [Actinosynnema mirum DSM 43827]
Length=253
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/96 (49%), Positives = 59/96 (62%), Gaps = 0/96 (0%)
Query 120 NKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAAS 179
+K PFVV+V+ LGVG+ +WLST A E SY+L AR L + E L R+V +A S
Sbjct 63 HKAPFVVMVMLVLGVGIAAIMWLSTQATEDSYRLQEARAEETELARKVEQLRREVAQAES 122
Query 180 APALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTP 215
L+EAAR GM+P D A L Q PDG+ V GTP
Sbjct 123 PLTLSEAARGLGMVPAGDPARLRQLPDGSVQVYGTP 158
>gi|258654058|ref|YP_003203214.1| hypothetical protein Namu_3932 [Nakamurella multipartita DSM
44233]
gi|258557283|gb|ACV80225.1| hypothetical protein Namu_3932 [Nakamurella multipartita DSM
44233]
Length=257
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/99 (41%), Positives = 54/99 (55%), Gaps = 0/99 (0%)
Query 117 TLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVRE 176
T N+ PFVV +I LGVG+ LWL+T E + S A+ +T L+ E L RDV
Sbjct 70 TALNRAPFVVALIALLGVGVTAVLWLNTLTDEAGMRTSTAKSKTTDLRLSIEELRRDVAM 129
Query 177 AASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTP 215
+ P +AE A+ GM+ D+A L+ D G VVG P
Sbjct 130 LDATPRIAEQAKALGMVQAGDSAMLIVDGSGTGTVVGEP 168
>gi|343924203|ref|ZP_08763766.1| hypothetical protein GOALK_002_01570 [Gordonia alkanivorans NBRC
16433]
gi|343766008|dbj|GAA10692.1| hypothetical protein GOALK_002_01570 [Gordonia alkanivorans NBRC
16433]
Length=302
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/236 (34%), Positives = 105/236 (45%), Gaps = 29/236 (12%)
Query 108 LTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHK 167
++ + LR R PFVV VI L +GLGL+LWLST +A+ SY+L R + L +
Sbjct 88 MSGVSLRERL--QHTPFVVPVIALLVLGLGLSLWLSTKSAQDSYKLGIERTENQSLIDQR 145
Query 168 EALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPADGVPPPPLN 227
+AL+R SAP L+ A R GMIP+ + A ++ D +VG P PA G P LN
Sbjct 146 DALKRTYESGNSAPELSREATRLGMIPSDNPARMIVDDPRRPRIVGKPAPASGKPMADLN 205
Query 228 TKLPEDPPPPPKPAAVPLEVPVRVTPG--PDDPAPPARSGPEVLVRTPDGTATLGGATHL 285
+L DP P V + + PD PA T G
Sbjct 206 PELKPDPTETIDPRKVDDSIGLGGGAAGAPDQPA----------------EQTPGQQAPA 249
Query 286 PTQAGPQLPGPVPIPGAPGPMPAPPLGAVPSPAPAENPVPLQVGAAPPAGLPGPAP 341
P+ G P P P+P P P P G S AP E+ G+ P P PAP
Sbjct 250 PSAPGQSAPSPQPVPAQPDPAPGQGEG---SSAPTES------GSTPQPSTPVPAP 296
>gi|213965287|ref|ZP_03393484.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952139|gb|EEB63524.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=274
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (31%), Positives = 58/120 (49%), Gaps = 5/120 (4%)
Query 120 NKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQQHKEALERDVREAAS 179
+K L+I + G+ + ++LS + S QL A+ + + L+ E LERDV S
Sbjct 72 HKFAGAALMIFLVVAGIVMAMFLSGISTSTSLQLDAAQTKEKELRNQLEVLERDVAYMKS 131
Query 180 APALAEAARRQGMIPTRDTAHLVQDPDGNWVVV--GTPKPADGVPPPPLNTKLPEDPPPP 237
A+A+ A +GM+ A L DP+G V V G K + LN++ P +P P
Sbjct 132 TGAIAQRAVEEGMVNPEQPAVLTTDPEGKVVEVRPGDEKQQKII---DLNSESPNNPHAP 188
>gi|294812139|ref|ZP_06770782.1| Septum formation initiator [Streptomyces clavuligerus ATCC 27064]
gi|326440705|ref|ZP_08215439.1| hypothetical protein SclaA2_06543 [Streptomyces clavuligerus
ATCC 27064]
gi|294324738|gb|EFG06381.1| Septum formation initiator [Streptomyces clavuligerus ATCC 27064]
Length=212
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/115 (39%), Positives = 60/115 (53%), Gaps = 2/115 (1%)
Query 105 AARLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARERTRMLQ 164
AARL + + A + PFV+LV+ LG GL L L++ +E S++LS R T L
Sbjct 12 AARLARMMPDGPSSAARTPFVLLVVVLLGGGLIALLLLNSALSEESFELSELRRETTALT 71
Query 165 QHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPAD 219
++AL+RDV + AL AR GM+P + A L PDG P PAD
Sbjct 72 DEQQALQRDVDSFLAPDALERRARELGMVPGGNPAFLA--PDGTVRGQADPAPAD 124
>gi|328881794|emb|CCA55033.1| hypothetical protein SVEN_1746 [Streptomyces venezuelae ATCC
10712]
Length=205
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/120 (38%), Positives = 67/120 (56%), Gaps = 4/120 (3%)
Query 100 PMERLAARLTSIDLRPRTLANKVPFVVLVIGSLGVGLGLTLWLSTDAAERSYQLSNARER 159
P++ AARL + + A + PFV+LV+ LG GL L L++ + S+QL+ ++R
Sbjct 7 PLKGRAARLGRLMPSGPSSAARTPFVLLVVVLLGGGLISLLLLNSALNQGSFQLNELKDR 66
Query 160 TRMLQQHKEALERDVREAASAPALAEAARRQGMIPTRDTAHLVQDPDGNWVVVGTPKPAD 219
T L ++AL+RDV + A+ AL AR GM+P A L PDG V+G P A+
Sbjct 67 TTELTDEEQALQRDVDDYAAPDALERRARELGMVPGGSPAFL--GPDGK--VLGRPSRAE 122
Lambda K H
0.312 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 746616418650
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40