BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2165c Length=396 Score E Sequences producing significant alignments: (Bits) Value gi|308380285|ref|ZP_07669154.1| hypothetical protein TMKG_00427 ... 788 0.0 gi|308232054|ref|ZP_07663988.1| hypothetical protein TMAG_00354 ... 786 0.0 gi|121638047|ref|YP_978271.1| S-adenosyl-methyltransferase MraW ... 784 0.0 gi|340627173|ref|YP_004745625.1| hypothetical protein MCAN_21891... 782 0.0 gi|339632196|ref|YP_004723838.1| hypothetical protein MAF_21780 ... 781 0.0 gi|15841657|ref|NP_336694.1| S-adenosyl-methyltransferase MraW [... 679 0.0 gi|167966821|ref|ZP_02549098.1| S-adenosyl-methyltransferase Mra... 651 0.0 gi|308374510|ref|ZP_07667801.1| hypothetical protein TMFG_01127 ... 647 0.0 gi|41396357|gb|AAS04222.1| hypothetical protein MAP_1905c [Mycob... 549 3e-154 gi|118618804|ref|YP_907136.1| S-adenosyl-methyltransferase MraW ... 541 8e-152 gi|342859877|ref|ZP_08716530.1| 16S rRNA m(4)C1402 methyltranser... 535 4e-150 gi|15827426|ref|NP_301689.1| S-adenosyl-methyltransferase MraW [... 528 7e-148 gi|296166032|ref|ZP_06848481.1| S-adenosyl-methyltransferase Mra... 527 2e-147 gi|8134827|sp|O69560.1|RSMH_MYCLE RecName: Full=Ribosomal RNA sm... 520 2e-145 gi|240168225|ref|ZP_04746884.1| S-adenosyl-methyltransferase Mra... 512 4e-143 gi|118464814|ref|YP_881532.1| S-adenosyl-methyltransferase MraW ... 507 1e-141 gi|254774999|ref|ZP_05216515.1| S-adenosyl-methyltransferase Mra... 506 3e-141 gi|161611203|ref|NP_960839.2| S-adenosyl-methyltransferase MraW ... 505 6e-141 gi|183983192|ref|YP_001851483.1| methyltransferase [Mycobacteriu... 495 5e-138 gi|262831569|sp|A0PTJ6.2|RSMH_MYCUA RecName: Full=Ribosomal RNA ... 487 2e-135 gi|254819736|ref|ZP_05224737.1| S-adenosyl-methyltransferase Mra... 477 2e-132 gi|120404503|ref|YP_954332.1| S-adenosyl-methyltransferase MraW ... 464 8e-129 gi|145223567|ref|YP_001134245.1| S-adenosyl-methyltransferase Mr... 452 5e-125 gi|333990375|ref|YP_004522989.1| methyltransferase [Mycobacteriu... 451 8e-125 gi|315443914|ref|YP_004076793.1| S-adenosyl-methyltransferase Mr... 446 3e-123 gi|262831574|sp|A1TAX6.2|RSMH_MYCVP RecName: Full=Ribosomal RNA ... 442 6e-122 gi|126435853|ref|YP_001071544.1| S-adenosyl-methyltransferase Mr... 426 3e-117 gi|118468497|ref|YP_888512.1| S-adenosyl-methyltransferase MraW ... 421 1e-115 gi|263460310|sp|A4TBF6.2|RSMH_MYCGI RecName: Full=Ribosomal RNA ... 421 1e-115 gi|312140150|ref|YP_004007486.1| SAM dependent methyltransferase... 414 9e-114 gi|111018109|ref|YP_701081.1| S-adenosyl-methyltransferase MraW ... 409 4e-112 gi|336441434|gb|AEI54942.1| S-adenosyl-methyltransferase [Mycoba... 409 4e-112 gi|325676969|ref|ZP_08156641.1| S-adenosyl-L-methionine-dependen... 407 1e-111 gi|108800230|ref|YP_640427.1| S-adenosyl-methyltransferase MraW ... 407 2e-111 gi|226360238|ref|YP_002778016.1| S-adenosyl-methyltransferase Mr... 405 6e-111 gi|336441440|gb|AEI54945.1| S-adenosyl-methyltransferase [Mycoba... 402 5e-110 gi|336441442|gb|AEI54946.1| S-adenosyl-methyltransferase [Mycoba... 400 2e-109 gi|169629085|ref|YP_001702734.1| S-adenosyl-methyltransferase Mr... 400 2e-109 gi|336441436|gb|AEI54943.1| S-adenosyl-methyltransferase [Mycoba... 399 3e-109 gi|336441438|gb|AEI54944.1| S-adenosyl-methyltransferase [Mycoba... 398 1e-108 gi|333918990|ref|YP_004492571.1| ribosomal RNA small subunit met... 392 4e-107 gi|326382552|ref|ZP_08204243.1| S-adenosyl-methyltransferase Mra... 387 2e-105 gi|229490464|ref|ZP_04384305.1| S-adenosyl-methyltransferase Mra... 383 3e-104 gi|226307047|ref|YP_002767007.1| methyltransferase MraW [Rhodoco... 383 3e-104 gi|262202917|ref|YP_003274125.1| S-adenosyl-methyltransferase Mr... 375 9e-102 gi|302528477|ref|ZP_07280819.1| MraW methylase [Streptomyces sp.... 366 4e-99 gi|300788105|ref|YP_003768396.1| S-adenosyl-methyltransferase [A... 366 4e-99 gi|54023726|ref|YP_117968.1| S-adenosyl-methyltransferase MraW [... 365 1e-98 gi|296140350|ref|YP_003647593.1| S-adenosyl-methyltransferase Mr... 363 3e-98 gi|325001098|ref|ZP_08122210.1| 16S rRNA m(4)C1402 methyltranser... 357 1e-96 >gi|308380285|ref|ZP_07669154.1| hypothetical protein TMKG_00427 [Mycobacterium tuberculosis SUMu011] gi|308361967|gb|EFP50818.1| hypothetical protein TMKG_00427 [Mycobacterium tuberculosis SUMu011] Length=425 Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%) Query 1 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP Sbjct 30 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 89 Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD Sbjct 90 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 149 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD Sbjct 150 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 209 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR Sbjct 210 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 269 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD Sbjct 270 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 329 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV Sbjct 330 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 389 Query 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 390 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 425 >gi|308232054|ref|ZP_07663988.1| hypothetical protein TMAG_00354 [Mycobacterium tuberculosis SUMu001] gi|308370931|ref|ZP_07667052.1| hypothetical protein TMCG_00261 [Mycobacterium tuberculosis SUMu003] gi|308372156|ref|ZP_07667311.1| hypothetical protein TMDG_00643 [Mycobacterium tuberculosis SUMu004] gi|345462007|ref|NP_216681.3| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis H37Rv] gi|308215154|gb|EFO74553.1| hypothetical protein TMAG_00354 [Mycobacterium tuberculosis SUMu001] gi|308330345|gb|EFP19196.1| hypothetical protein TMCG_00261 [Mycobacterium tuberculosis SUMu003] gi|308334178|gb|EFP23029.1| hypothetical protein TMDG_00643 [Mycobacterium tuberculosis SUMu004] Length=405 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%) Query 1 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP Sbjct 10 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 69 Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD Sbjct 70 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 129 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD Sbjct 130 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 189 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR Sbjct 190 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 249 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD Sbjct 250 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 309 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV Sbjct 310 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 369 Query 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 370 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 405 >gi|121638047|ref|YP_978271.1| S-adenosyl-methyltransferase MraW [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661981|ref|YP_001283504.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis H37Ra] gi|148823374|ref|YP_001288128.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis F11] 47 more sequence titles Length=396 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/396 (99%), Positives = 396/396 (100%), Gaps = 0/396 (0%) Query 1 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 +QTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP Sbjct 1 MQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD Sbjct 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD Sbjct 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR Sbjct 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD Sbjct 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV Sbjct 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 Query 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 >gi|340627173|ref|YP_004745625.1| hypothetical protein MCAN_21891 [Mycobacterium canettii CIPT 140010059] gi|340005363|emb|CCC44521.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=396 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%) Query 1 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 +QTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP Sbjct 1 MQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD Sbjct 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD Sbjct 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR Sbjct 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLR AVPAALD Sbjct 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRKAVPAALD 300 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV Sbjct 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 Query 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 >gi|339632196|ref|YP_004723838.1| hypothetical protein MAF_21780 [Mycobacterium africanum GM041182] gi|339331552|emb|CCC27248.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=396 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%) Query 1 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 +QTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP Sbjct 1 MQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD Sbjct 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAES YAAVGSVDGILFDLGVSSMQLD Sbjct 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESDYAAVGSVDGILFDLGVSSMQLD 180 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR Sbjct 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD Sbjct 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV Sbjct 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 Query 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 >gi|15841657|ref|NP_336694.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis CDC1551] gi|161511532|ref|NP_855838.2| S-adenosyl-methyltransferase MraW [Mycobacterium bovis AF2122/97] gi|254551204|ref|ZP_05141651.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 16 more sequence titles Length=344 Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/344 (99%), Positives = 344/344 (100%), Gaps = 0/344 (0%) Query 53 VADPGSGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLP 112 +ADPGSGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLP Sbjct 1 MADPGSGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLP 60 Query 113 GLRLIGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDL 172 GLRLIGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDL Sbjct 61 GLRLIGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDL 120 Query 173 GVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFAR 232 GVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFAR Sbjct 121 GVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFAR 180 Query 233 RIAAGIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLR 292 RIAAGIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLR Sbjct 181 RIAAGIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLR 240 Query 293 TAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLT 352 TAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLT Sbjct 241 TAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLT 300 Query 353 HGAERASVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 HGAERASVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 301 HGAERASVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 344 >gi|167966821|ref|ZP_02549098.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis H37Ra] Length=331 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/331 (99%), Positives = 331/331 (100%), Gaps = 0/331 (0%) Query 66 VPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTA 125 +PVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTA Sbjct 1 MPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTA 60 Query 126 LDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERG 185 LDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERG Sbjct 61 LDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERG 120 Query 186 FAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKT 245 FAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKT Sbjct 121 FAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKT 180 Query 246 PFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIG 305 PFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIG Sbjct 181 PFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIG 240 Query 306 GRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIER 365 GRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIER Sbjct 241 GRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIER 300 Query 366 NPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 NPRSTPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 301 NPRSTPVRLRALQRVEHRAQSQQWATEKGDS 331 >gi|308374510|ref|ZP_07667801.1| hypothetical protein TMFG_01127 [Mycobacterium tuberculosis SUMu006] gi|308341663|gb|EFP30514.1| hypothetical protein TMFG_01127 [Mycobacterium tuberculosis SUMu006] gi|323719262|gb|EGB28406.1| hypothetical protein TMMG_01445 [Mycobacterium tuberculosis CDC1551A] Length=328 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/328 (99%), Positives = 328/328 (100%), Gaps = 0/328 (0%) Query 69 LAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTALDV 128 +AQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTALDV Sbjct 1 MAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTALDV 60 Query 129 ARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGFAY 188 ARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGFAY Sbjct 61 ARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGFAY 120 Query 189 ATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTPFT 248 ATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTPFT Sbjct 121 ATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTPFT 180 Query 249 STAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIGGRI 308 STAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIGGRI Sbjct 181 STAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIGGRI 240 Query 309 AVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIERNPR 368 AVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIERNPR Sbjct 241 AVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIERNPR 300 Query 369 STPVRLRALQRVEHRAQSQQWATEKGDS 396 STPVRLRALQRVEHRAQSQQWATEKGDS Sbjct 301 STPVRLRALQRVEHRAQSQQWATEKGDS 328 >gi|41396357|gb|AAS04222.1| hypothetical protein MAP_1905c [Mycobacterium avium subsp. paratuberculosis K-10] Length=386 Score = 549 bits (1415), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 302/394 (77%), Positives = 323/394 (82%), Gaps = 18/394 (4%) Query 2 QTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGPT 61 RA W LPE TLAYFPNARFV SDRDL AGAA I GG+ V D Sbjct 11 HARATWPLPEPTLAYFPNARFVPSDRDLDAGAARPI----------RGGVAVVDDSPD-- 58 Query 62 GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDR 121 FGHVPVL +RC ELLTPALTR +PDGS AVLLDAT+GAGGHAERFL LPGLRLI LDR Sbjct 59 -FGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLADLPGLRLIALDR 117 Query 122 DPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDR 181 DP+AL++AR RL RFADR+TLVH RYD + AAL ESGYAA SVDGILFDLGVSSMQLDR Sbjct 118 DPSALEIARERLARFADRITLVHMRYDGIAAALTESGYAATESVDGILFDLGVSSMQLDR 177 Query 182 AERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRR 241 ERGFAYA DAPLDMRMDP +PLTAADI+NTYDEA LADIL RYGEERFARRIAA IVRR Sbjct 178 PERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQIVRR 237 Query 242 RAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDA 301 RAK PFTSTA+LV+LLYQAIPAPARR GGHPAKRTFQALRIAVNDEL++LR A+PAALDA Sbjct 238 RAKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRRALPAALDA 297 Query 302 LAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVA 361 LA+ GRI VLAYQSLEDRIVKR+FA+AVAS TP LPVELPGHEPRFR+LTHGA RA A Sbjct 298 LAVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRADAA 357 Query 362 EIERNPRSTPVRLRALQRVEHRAQSQQWATEKGD 395 EIERNPRS VRLRALQR Q+ Q AT KGD Sbjct 358 EIERNPRSAAVRLRALQRT----QAPQ-ATGKGD 386 >gi|118618804|ref|YP_907136.1| S-adenosyl-methyltransferase MraW [Mycobacterium ulcerans Agy99] gi|118570914|gb|ABL05665.1| methyltransferase [Mycobacterium ulcerans Agy99] Length=395 Score = 541 bits (1394), Expect = 8e-152, Method: Compositional matrix adjust. Identities = 296/398 (75%), Positives = 329/398 (83%), Gaps = 5/398 (1%) Query 1 VQTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGP 60 + RAPWSLPE TLAYFPNARFV SDRDLGAGA + T GG+ VAD + P Sbjct 1 MHVRAPWSLPEPTLAYFPNARFVPSDRDLGAGALRLVG--EDCPAPTRGGVAVADGPTEP 58 Query 61 --TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIG 118 F HVPVLAQRC ELL PALTR++ DGS+AVL+DATIGAGGHAERFL LPGLRLIG Sbjct 59 GFNDFHHVPVLAQRCVELLRPALTRHHADGSEAVLVDATIGAGGHAERFLTELPGLRLIG 118 Query 119 LDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQ 178 LDRDP+AL++ R+RL RF DR+TLVHTRYD L +AL E GY A S+DG LFDLGVSSMQ Sbjct 119 LDRDPSALEIVRTRLARFTDRVTLVHTRYDGLASALTELGYGAAQSIDGALFDLGVSSMQ 178 Query 179 LDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGI 238 LD+AERGFAY+ DAPLDMRM+P + L+ ADI+NTYDEAALADIL RYGEERFARRIAA I Sbjct 179 LDQAERGFAYSKDAPLDMRMNPQSALSGADIINTYDEAALADILHRYGEERFARRIAARI 238 Query 239 VRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAA 298 +RRRA PFT+TAELVALLY+AIPA ARR GGHPAKRTFQALRIAVNDEL SLR+AVPAA Sbjct 239 IRRRADRPFTTTAELVALLYEAIPAAARRTGGHPAKRTFQALRIAVNDELGSLRSAVPAA 298 Query 299 LDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERA 358 +DALA+GGRI V+AYQSLEDRIVKRVFA+AVAS TP LPVELPGH PRFRSLTHGAERA Sbjct 299 MDALAVGGRIVVMAYQSLEDRIVKRVFADAVASRTPVDLPVELPGHGPRFRSLTHGAERA 358 Query 359 SVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AE+E NPRS PVRLRALQR+E A +Q T KG+S Sbjct 359 DAAEVEHNPRSAPVRLRALQRLELEALPRQ-GTGKGES 395 >gi|342859877|ref|ZP_08716530.1| 16S rRNA m(4)C1402 methyltranserfase [Mycobacterium colombiense CECT 3035] gi|342133009|gb|EGT86229.1| 16S rRNA m(4)C1402 methyltranserfase [Mycobacterium colombiense CECT 3035] Length=355 Score = 535 bits (1379), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 271/361 (76%), Positives = 307/361 (86%), Gaps = 7/361 (1%) Query 37 IAASRSTAC-QTWGGITVADPGSGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLD 95 +AA + C Q GG+ VAD S +GHVPVL +RC ELLTPALTR+ PDGS+A LLD Sbjct 1 MAARVADGCRQIRGGVAVAD-NSSSDDYGHVPVLLERCVELLTPALTRHSPDGSEATLLD 59 Query 96 ATIGAGGHAERFLEGLPGLRLIGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALA 155 AT+GAGGHAERFL LPGLRL+GLDRDP+ALD+AR+RL RFADR+TLVHTRYD + AAL Sbjct 60 ATLGAGGHAERFLTDLPGLRLVGLDRDPSALDIARTRLARFADRITLVHTRYDGIAAALD 119 Query 156 ESGYAAVGSVDGILFDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDE 215 ESGYAA S+DG+LFDLGVSSMQLDR ERGFAYA DAPLDMRMDP++PLTAADIVNTYDE Sbjct 120 ESGYAATESIDGMLFDLGVSSMQLDRTERGFAYAQDAPLDMRMDPSSPLTAADIVNTYDE 179 Query 216 AALADILRRYGEERFARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKR 275 A LA+IL RYGEERFARRIAA IVRRRA+ PFTST++LVALLY+AIPA ARR GGHPAKR Sbjct 180 AELANILHRYGEERFARRIAAHIVRRRAREPFTSTSDLVALLYEAIPAAARRTGGHPAKR 239 Query 276 TFQALRIAVNDELESLRTAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPA 335 TFQALR+AVNDEL++LR A+PAALDAL +GGRI V+AYQSLEDRIVKR+FA+AVAS TP Sbjct 240 TFQALRVAVNDELDTLRRALPAALDALDVGGRIVVMAYQSLEDRIVKRLFAQAVASRTPV 299 Query 336 GLPVELPGHEPRFRSLTHGAERASVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGD 395 LPVELPGHEPRFR+LTHGA RA E+ERNPRS VRLRALQR+E Q A+ KGD Sbjct 300 DLPVELPGHEPRFRALTHGAGRADATEVERNPRSAAVRLRALQRME-----SQQASGKGD 354 Query 396 S 396 + Sbjct 355 A 355 >gi|15827426|ref|NP_301689.1| S-adenosyl-methyltransferase MraW [Mycobacterium leprae TN] gi|221229903|ref|YP_002503319.1| S-adenosyl-methyltransferase MraW [Mycobacterium leprae Br4923] gi|13092976|emb|CAC31287.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933010|emb|CAR71001.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=372 Score = 528 bits (1360), Expect = 7e-148, Method: Compositional matrix adjust. Identities = 277/374 (75%), Positives = 305/374 (82%), Gaps = 6/374 (1%) Query 25 SDRDLGAGAAPGI-AASRSTAC-QTWGGITVADPGSGPTGFGHVPVLAQRCFELLTPALT 82 SDRD AG A RS C QT GG V D G + FGHVPV AQRC LL PALT Sbjct 3 SDRDHDAGIFAFFGAVPRSDRCRQTRGGGEVVD---GSSVFGHVPVFAQRCVTLLAPALT 59 Query 83 RYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTALDVARSRLVRFADRLTL 142 R++ DGS A+L+DAT+G GGHAERFL PGLRLIGLDRDP+ALD+AR+RL+RFADR+TL Sbjct 60 RHHADGSNAILVDATLGVGGHAERFLTEFPGLRLIGLDRDPSALDIARTRLMRFADRVTL 119 Query 143 VHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGFAYATDAPLDMRMDPTT 202 +HTRYD L AL + GYAAV SVDG+LFDLGVSSMQLD AERGF+YA D PLDMRMDP + Sbjct 120 IHTRYDNLAVALNKFGYAAVESVDGVLFDLGVSSMQLDCAERGFSYAQDVPLDMRMDPWS 179 Query 203 PLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTPFTSTAELVALLYQAIP 262 P++AADIVN YDEAALADILRRYGEERFARRIAA IVRRRA TPFTSTAELVALLYQAIP Sbjct 180 PVSAADIVNNYDEAALADILRRYGEERFARRIAAHIVRRRAHTPFTSTAELVALLYQAIP 239 Query 263 APARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIGGRIAVLAYQSLEDRIVK 322 APARR+GGHPAKRTFQALRIAVNDEL SL +PAALDAL + GR+ VLAYQSLEDRIVK Sbjct 240 APARRIGGHPAKRTFQALRIAVNDELNSLSNVLPAALDALTVAGRLVVLAYQSLEDRIVK 299 Query 323 RVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIERNPRSTPVRLRALQRVEH 382 RVFA+AV+S TPAGLP+ELPGH PRFR LT GAE A AEIE NPRS VRLRALQR +H Sbjct 300 RVFADAVSSRTPAGLPIELPGHGPRFRLLTRGAEHADAAEIECNPRSAAVRLRALQRTQH 359 Query 383 RAQSQQWATEKGDS 396 + QQ T +GDS Sbjct 360 GVEPQQ-PTRRGDS 372 >gi|296166032|ref|ZP_06848481.1| S-adenosyl-methyltransferase MraW [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898597|gb|EFG78154.1| S-adenosyl-methyltransferase MraW [Mycobacterium parascrofulaceum ATCC BAA-614] Length=334 Score = 527 bits (1357), Expect = 2e-147, Method: Compositional matrix adjust. Identities = 268/336 (80%), Positives = 289/336 (87%), Gaps = 7/336 (2%) Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 + FGHVPVL RC ELLTPALTR+ DGS AVLLDAT+GAGGHAERFL LPGLRLIGLD Sbjct 6 SAFGHVPVLLGRCVELLTPALTRHDADGSGAVLLDATLGAGGHAERFLTDLPGLRLIGLD 65 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDP AL++ R+RL RFADR+TLVHTRYD L AALAESGY A+ SVDG+LFDLGVSSMQLD Sbjct 66 RDPNALEITRARLARFADRITLVHTRYDGLAAALAESGYGAIESVDGMLFDLGVSSMQLD 125 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 RAERGFAYA DAPLDMRMDP +PLTAADI+NTYDEAALADIL RYGEERFARRIAA +VR Sbjct 126 RAERGFAYAQDAPLDMRMDPESPLTAADILNTYDEAALADILHRYGEERFARRIAAQVVR 185 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RRA+ PF STA+LVALLYQAIPAPARR GGHPAKRTFQALRIAVNDEL SLR A PA LD Sbjct 186 RRARAPFASTADLVALLYQAIPAPARRTGGHPAKRTFQALRIAVNDELNSLRAATPAGLD 245 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALA+GGR+ VLAYQSLEDRIVKR+FA AVAS TP LPVELPGHEPRFRSLTHGAERA Sbjct 246 ALAVGGRMVVLAYQSLEDRIVKRLFAAAVASRTPVDLPVELPGHEPRFRSLTHGAERADA 305 Query 361 AEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 E+ERNPRS VRLRA+QRV Q +T K D+ Sbjct 306 DEVERNPRSAAVRLRAVQRV-------QQSTGKADA 334 >gi|8134827|sp|O69560.1|RSMH_MYCLE RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|263460319|sp|B8ZQP2.2|RSMH_MYCLB RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|3080481|emb|CAA18676.1| hypothetical protein MLCB268.10c [Mycobacterium leprae] Length=340 Score = 520 bits (1338), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 261/338 (78%), Positives = 289/338 (86%), Gaps = 1/338 (0%) Query 59 GPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIG 118 G + FGHVPV AQRC LL PALTR++ DGS A+L+DAT+G GGHAERFL PGLRLIG Sbjct 4 GSSVFGHVPVFAQRCVTLLAPALTRHHADGSNAILVDATLGVGGHAERFLTEFPGLRLIG 63 Query 119 LDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQ 178 LDRDP+ALD+AR+RL+RFADR+TL+HTRYD L AL + GYAAV SVDG+LFDLGVSSMQ Sbjct 64 LDRDPSALDIARTRLMRFADRVTLIHTRYDNLAVALNKFGYAAVESVDGVLFDLGVSSMQ 123 Query 179 LDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGI 238 LD AERGF+YA D PLDMRMDP +P++AADIVN YDEAALADILRRYGEERFARRIAA I Sbjct 124 LDCAERGFSYAQDVPLDMRMDPWSPVSAADIVNNYDEAALADILRRYGEERFARRIAAHI 183 Query 239 VRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAA 298 VRRRA TPFTSTAELVALLYQAIPAPARR+GGHPAKRTFQALRIAVNDEL SL +PAA Sbjct 184 VRRRAHTPFTSTAELVALLYQAIPAPARRIGGHPAKRTFQALRIAVNDELNSLSNVLPAA 243 Query 299 LDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERA 358 LDAL + GR+ VLAYQSLEDRIVKRVFA+AV+S TPAGLP+ELPGH PRFR LT GAE A Sbjct 244 LDALTVAGRLVVLAYQSLEDRIVKRVFADAVSSRTPAGLPIELPGHGPRFRLLTRGAEHA 303 Query 359 SVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AEIE NPRS VRLRALQR +H + QQ T +GDS Sbjct 304 DAAEIECNPRSAAVRLRALQRTQHGVEPQQ-PTRRGDS 340 >gi|240168225|ref|ZP_04746884.1| S-adenosyl-methyltransferase MraW [Mycobacterium kansasii ATCC 12478] Length=330 Score = 512 bits (1319), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 260/331 (79%), Positives = 290/331 (88%), Gaps = 1/331 (0%) Query 66 VPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTA 125 +PVLA+RC ELL PALTR +PDG A+L+DAT+GAGGHAERFL LPGLRLIGLDRDP+A Sbjct 1 MPVLARRCVELLAPALTRRHPDGFGAILVDATLGAGGHAERFLRELPGLRLIGLDRDPSA 60 Query 126 LDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERG 185 LD+AR RL FA+R+TL+ TRYD + + LAE GY AV SVDG+LFDLGVSSMQLDRAERG Sbjct 61 LDIARDRLAPFAERITLIRTRYDGVASVLAELGYGAVESVDGVLFDLGVSSMQLDRAERG 120 Query 186 FAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKT 245 FAYA DAPLDMRMDP PLTAADIVN+YDEAALADILRRYGEERFARRIA IVR+RA T Sbjct 121 FAYAKDAPLDMRMDPDIPLTAADIVNSYDEAALADILRRYGEERFARRIAERIVRQRAHT 180 Query 246 PFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIG 305 PFTST+ELVA++YQAIPA ARR GGHPAKRTFQALRIAVNDEL++LR AVPAA+ AL +G Sbjct 181 PFTSTSELVAVVYQAIPAAARRTGGHPAKRTFQALRIAVNDELDTLRGAVPAAMAALRVG 240 Query 306 GRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIER 365 GRI V+AYQSLEDRIVKRVFA+AVAS TP GLPVELPGH PRFRSLTHGAERA AE+ER Sbjct 241 GRIVVMAYQSLEDRIVKRVFADAVASKTPIGLPVELPGHGPRFRSLTHGAERADAAEMER 300 Query 366 NPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 NPRS VRLRALQR++H A+ + AT KGDS Sbjct 301 NPRSAAVRLRALQRIDHEAEPRH-ATGKGDS 330 >gi|118464814|ref|YP_881532.1| S-adenosyl-methyltransferase MraW [Mycobacterium avium 104] gi|263456513|sp|A0QF44.1|RSMH_MYCA1 RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|118166101|gb|ABK66998.1| S-adenosyl-methyltransferase MraW [Mycobacterium avium 104] Length=335 Score = 507 bits (1306), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 272/333 (82%), Positives = 292/333 (88%), Gaps = 5/333 (1%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 FGHVPVL +RC ELLTPALTR +PDGS AVLLDAT+GAGGHAERFL LPGLRLI LDRD Sbjct 8 FGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLTDLPGLRLIALDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 P+AL++AR RL RFADR+TLVHTRYD + AAL ESGYAA SVDGILFDLGVSSMQLDR Sbjct 68 PSALEIARERLARFADRITLVHTRYDGIAAALTESGYAATESVDGILFDLGVSSMQLDRP 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAYA DAPLDMRMDP +PLTAADI+NTYDEA LADIL RYGEERFARRIAA IVRRR Sbjct 128 ERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 AK PFTSTA+LV+LLYQAIPAPARR GGHPAKRTFQALRIAVNDEL++LR A+PAALDAL Sbjct 188 AKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRCALPAALDAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 A+ GRI VLAYQSLEDRIVKR+FA+AVAS TP LPVELPGHEPRFR+LTHGA RA AE Sbjct 248 AVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRADAAE 307 Query 363 IERNPRSTPVRLRALQRVEHRAQSQQWATEKGD 395 IERNPRS VRLRALQR Q+ Q AT KGD Sbjct 308 IERNPRSAAVRLRALQRT----QAPQ-ATGKGD 335 >gi|254774999|ref|ZP_05216515.1| S-adenosyl-methyltransferase MraW [Mycobacterium avium subsp. avium ATCC 25291] Length=334 Score = 506 bits (1302), Expect = 3e-141, Method: Compositional matrix adjust. Identities = 265/319 (84%), Positives = 285/319 (90%), Gaps = 0/319 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 FGHVPVL +RC ELLTPALTR +PDGS AVLLDAT+GAGGHAERFL LPGLRLI LDRD Sbjct 8 FGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLTDLPGLRLIALDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 P+AL++AR RL RFADR+TLVHTRYD + AAL ESGYAA SVDGILFDLGVSSMQLDR Sbjct 68 PSALEIARERLARFADRITLVHTRYDGIAAALTESGYAATESVDGILFDLGVSSMQLDRP 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAYA DAPLDMRMDP +PLTAADI+NTYDEA LADIL RYGEERFARRIAA IVRRR Sbjct 128 ERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 AK PFTSTA+LV+LLYQAIPAPARR GGHPAKRTFQALRIAVNDEL++LR A+PAALDAL Sbjct 188 AKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRCALPAALDAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 A+ GRI VLAYQSLEDRIVKR+FA+AVAS TP LPVELPGHEPRFR+LTHGA RA AE Sbjct 248 AVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRADAAE 307 Query 363 IERNPRSTPVRLRALQRVE 381 IERNPRS VRLRALQR + Sbjct 308 IERNPRSAAVRLRALQRTQ 326 >gi|161611203|ref|NP_960839.2| S-adenosyl-methyltransferase MraW [Mycobacterium avium subsp. paratuberculosis K-10] gi|88911700|sp|P62474.1|RSMH_MYCPA RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|336461951|gb|EGO40803.1| S-adenosyl-methyltransferase MraW [Mycobacterium avium subsp. paratuberculosis S397] Length=335 Score = 505 bits (1300), Expect = 6e-141, Method: Compositional matrix adjust. Identities = 271/333 (82%), Positives = 291/333 (88%), Gaps = 5/333 (1%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 FGHVPVL +RC ELLTPALTR +PDGS AVLLDAT+GAGGHAERFL LPGLRLI LDRD Sbjct 8 FGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLADLPGLRLIALDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 P+AL++AR RL RFADR+TLVH RYD + AAL ESGYAA SVDGILFDLGVSSMQLDR Sbjct 68 PSALEIARERLARFADRITLVHMRYDGIAAALTESGYAATESVDGILFDLGVSSMQLDRP 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAYA DAPLDMRMDP +PLTAADI+NTYDEA LADIL RYGEERFARRIAA IVRRR Sbjct 128 ERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 AK PFTSTA+LV+LLYQAIPAPARR GGHPAKRTFQALRIAVNDEL++LR A+PAALDAL Sbjct 188 AKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRRALPAALDAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 A+ GRI VLAYQSLEDRIVKR+FA+AVAS TP LPVELPGHEPRFR+LTHGA RA AE Sbjct 248 AVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRADAAE 307 Query 363 IERNPRSTPVRLRALQRVEHRAQSQQWATEKGD 395 IERNPRS VRLRALQR Q+ Q AT KGD Sbjct 308 IERNPRSAAVRLRALQRT----QAPQ-ATGKGD 335 >gi|183983192|ref|YP_001851483.1| methyltransferase [Mycobacterium marinum M] gi|262825131|sp|B2HGS5.1|RSMH_MYCMM RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|183176518|gb|ACC41628.1| methyltransferase [Mycobacterium marinum M] Length=345 Score = 495 bits (1275), Expect = 5e-138, Method: Compositional matrix adjust. Identities = 263/338 (78%), Positives = 294/338 (87%), Gaps = 1/338 (0%) Query 59 GPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIG 118 G F HVPVLAQRC ELL PALTR++ DGS+AVL+DATIGAGGHAERFL LPGLRLIG Sbjct 9 GFNDFHHVPVLAQRCVELLRPALTRHHADGSEAVLVDATIGAGGHAERFLTELPGLRLIG 68 Query 119 LDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQ 178 LDRDP+AL++ R+RL RFADR+TLVHTRYD L +AL E GY A S+DG LFDLGVSSMQ Sbjct 69 LDRDPSALEIVRTRLARFADRVTLVHTRYDGLASALTELGYGAAQSIDGALFDLGVSSMQ 128 Query 179 LDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGI 238 LD+AERGFAY+ DAPLDMRM+P + L+AADI+NTYDEAALADIL RYGEERFARRIAA I Sbjct 129 LDQAERGFAYSKDAPLDMRMNPQSALSAADIINTYDEAALADILHRYGEERFARRIAARI 188 Query 239 VRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAA 298 +RRRA PFT+TAELVALLY+AIPA ARR GGHPAKRTFQALRIAVNDEL SLR+A+PAA Sbjct 189 IRRRADKPFTTTAELVALLYEAIPAAARRTGGHPAKRTFQALRIAVNDELGSLRSAIPAA 248 Query 299 LDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERA 358 +DALA+GGRI V+AYQSLEDRIVKRVFA+AVAS TP LPVELPGH PRFRSLTHGAERA Sbjct 249 MDALAVGGRIVVMAYQSLEDRIVKRVFADAVASRTPMDLPVELPGHGPRFRSLTHGAERA 308 Query 359 SVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AE+ERNPRS PVRLRAL+R+E A +Q T KG+S Sbjct 309 DAAEVERNPRSAPVRLRALERLELEALPRQ-GTGKGES 345 >gi|262831569|sp|A0PTJ6.2|RSMH_MYCUA RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH Length=345 Score = 487 bits (1253), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 262/338 (78%), Positives = 291/338 (87%), Gaps = 1/338 (0%) Query 59 GPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIG 118 G F HVPVLAQRC ELL PALTR++ DGS+AVL+DATIGAGGHAERFL LPGLRLIG Sbjct 9 GFNDFHHVPVLAQRCVELLRPALTRHHADGSEAVLVDATIGAGGHAERFLTELPGLRLIG 68 Query 119 LDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQ 178 LDRDP+AL++ R+RL RF DR+TLVHTRYD L +AL E GY A S+DG LFDLGVSSMQ Sbjct 69 LDRDPSALEIVRTRLARFTDRVTLVHTRYDGLASALTELGYGAAQSIDGALFDLGVSSMQ 128 Query 179 LDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGI 238 LD+AERGFAY+ DAPLDMRM+P + L+ ADI+NTYDEAALADIL RYGEERFARRIAA I Sbjct 129 LDQAERGFAYSKDAPLDMRMNPQSALSGADIINTYDEAALADILHRYGEERFARRIAARI 188 Query 239 VRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAA 298 +RRRA PFT+TAELVALLY+AIPA ARR GGHPAKRTFQALRIAVNDEL SLR+AVPAA Sbjct 189 IRRRADRPFTTTAELVALLYEAIPAAARRTGGHPAKRTFQALRIAVNDELGSLRSAVPAA 248 Query 299 LDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERA 358 +DALA+GGRI V+AYQSLEDRIVKRVFA+AVAS TP LPVELPGH PRFRSLTHGAERA Sbjct 249 MDALAVGGRIVVMAYQSLEDRIVKRVFADAVASRTPVDLPVELPGHGPRFRSLTHGAERA 308 Query 359 SVAEIERNPRSTPVRLRALQRVEHRAQSQQWATEKGDS 396 AE+E NPRS PVRLRALQR+E A +Q T KG+S Sbjct 309 DAAEVEHNPRSAPVRLRALQRLELEALPRQ-GTGKGES 345 >gi|254819736|ref|ZP_05224737.1| S-adenosyl-methyltransferase MraW [Mycobacterium intracellulare ATCC 13950] Length=321 Score = 477 bits (1227), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 253/323 (79%), Positives = 280/323 (87%), Gaps = 4/323 (1%) Query 66 VPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTA 125 +PVL +RC LLTPALTR++PDG+ A L+DAT+GAGGHAERFL LPGLRLIGLDRDPTA Sbjct 1 MPVLLERCVALLTPALTRHHPDGTGATLVDATVGAGGHAERFLTELPGLRLIGLDRDPTA 60 Query 126 LDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERG 185 LD+ R+RL RF+DR+TLV TRYD + ALAESGYAA SVDG+LFDLGVSSMQLDRAERG Sbjct 61 LDITRTRLARFSDRVTLVRTRYDGVATALAESGYAATESVDGMLFDLGVSSMQLDRAERG 120 Query 186 FAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKT 245 FAYA DAPLDMRMDP PLTAADI+NTYDE LA+IL RYGEERFARRIAA IVRRRA+ Sbjct 121 FAYAQDAPLDMRMDPDAPLTAADILNTYDETELANILHRYGEERFARRIAAHIVRRRARQ 180 Query 246 PFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIG 305 PF STA+LVALLY+AIPA ARR GGHPAKRTFQALR+AVNDEL+SLR A+PAALDALA+G Sbjct 181 PFASTADLVALLYEAIPAAARRTGGHPAKRTFQALRVAVNDELDSLRAALPAALDALAVG 240 Query 306 GRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIER 365 GRI V+ YQSLEDRIVKR+FAEAVAS TP LPVELPGH+PRFR+LT GA RA EIER Sbjct 241 GRIVVMTYQSLEDRIVKRLFAEAVASRTPVDLPVELPGHQPRFRALTQGAGRADATEIER 300 Query 366 NPRSTPVRLRALQRVEHRAQSQQ 388 NPRS VRLRALQR+E SQQ Sbjct 301 NPRSAAVRLRALQRME----SQQ 319 >gi|120404503|ref|YP_954332.1| S-adenosyl-methyltransferase MraW [Mycobacterium vanbaalenii PYR-1] gi|119957321|gb|ABM14326.1| S-adenosyl-methyltransferase MraW [Mycobacterium vanbaalenii PYR-1] Length=378 Score = 464 bits (1195), Expect = 8e-129, Method: Compositional matrix adjust. Identities = 253/379 (67%), Positives = 278/379 (74%), Gaps = 18/379 (4%) Query 2 QTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGPT 61 Q RA LPE L YFP+ R SDRDL AGAAP + +P Sbjct 15 QARAVRPLPEPALTYFPDVRSAPSDRDLTAGAAP---------TSPSAAMVDDEP----- 60 Query 62 GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDR 121 H+PVL RC ELL PALTR DGS A L+DAT+GAGGH+ERFL P LRLIGLDR Sbjct 61 ---HIPVLLDRCVELLAPALTRTSTDGSGATLVDATLGAGGHSERFLTQFPALRLIGLDR 117 Query 122 DPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDR 181 DP AL +A RL RF DR+TLV TRYD + AA+AES AA G VD ILFDLGVSSMQLDR Sbjct 118 DPDALHIAGDRLARFGDRVTLVRTRYDGIAAAVAESNCAATG-VDAILFDLGVSSMQLDR 176 Query 182 AERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRR 241 ERGFAY+ DAPLDMRMD + LTAA ++NTYDE ALA +LR YGEE+FA RIAA IVRR Sbjct 177 VERGFAYSVDAPLDMRMDSGSDLTAAQVLNTYDEKALARVLRVYGEEKFAGRIAAQIVRR 236 Query 242 RAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDA 301 RA TPF++T ELV LLYQAIPAPARR GGHPAKRTFQALRI VN ELESLR A+PAAL+ Sbjct 237 RANTPFSTTGELVELLYQAIPAPARRTGGHPAKRTFQALRIEVNAELESLRLAIPAALEV 296 Query 302 LAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVA 361 L GRIAV+AYQSLEDRIVK FA A AS TP GLPVELPGH PRF +LT GAERA Sbjct 297 LRPHGRIAVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHGPRFVALTRGAERADAE 356 Query 362 EIERNPRSTPVRLRALQRV 380 EIERNPRS VRLRAL++V Sbjct 357 EIERNPRSASVRLRALEKV 375 >gi|145223567|ref|YP_001134245.1| S-adenosyl-methyltransferase MraW [Mycobacterium gilvum PYR-GCK] gi|145216053|gb|ABP45457.1| S-adenosyl-methyltransferase MraW [Mycobacterium gilvum PYR-GCK] Length=371 Score = 452 bits (1163), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 248/379 (66%), Positives = 276/379 (73%), Gaps = 25/379 (6%) Query 2 QTRAPWSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGPT 61 Q RA W L E L YFP+ RF +SDRDL AGAAP ++ Q Sbjct 15 QARAVWPLSEPALTYFPDVRFATSDRDLTAGAAPTPQSAAMVDDQP-------------- 60 Query 62 GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDR 121 HVPVL RC ELL PALTR A L+DAT+GAGGH+ERFL PGLRLIGLDR Sbjct 61 ---HVPVLLDRCVELLAPALTR-----EGATLVDATLGAGGHSERFLTDFPGLRLIGLDR 112 Query 122 DPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDR 181 DP AL +A RL FADR+TLV TRYD + A+ + AA GSVD ILFDLGVSSMQLDR Sbjct 113 DPDALRIAGERLAPFADRITLVRTRYDGIADAVRD---AAGGSVDAILFDLGVSSMQLDR 169 Query 182 AERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRR 241 ERGF+Y+TDAPLDMRMD LTAA ++N+YDE ALA +LR YGEE+FA RIAA IVRR Sbjct 170 VERGFSYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGEEKFAGRIAAFIVRR 229 Query 242 RAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDA 301 RA TPFT+T ELV LLY AIPAPARR GGHPAKRTFQALRI VN ELESLR+A+PAAL A Sbjct 230 RAVTPFTTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIEVNAELESLRSAIPAALQA 289 Query 302 LAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVA 361 L GR+AV+AYQSLEDRIVK FA A AS TP GLPVELPGH P F +LT GAERA Sbjct 290 LRPHGRLAVMAYQSLEDRIVKTAFAAATASRTPPGLPVELPGHGPEFVALTRGAERADAE 349 Query 362 EIERNPRSTPVRLRALQRV 380 EIERNPRS PVRLRA+++V Sbjct 350 EIERNPRSAPVRLRAVEKV 368 >gi|333990375|ref|YP_004522989.1| methyltransferase [Mycobacterium sp. JDM601] gi|333486343|gb|AEF35735.1| methyltransferase [Mycobacterium sp. JDM601] Length=335 Score = 451 bits (1161), Expect = 8e-125, Method: Compositional matrix adjust. Identities = 237/318 (75%), Positives = 265/318 (84%), Gaps = 0/318 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 FGHVPVL +RC ELL PALTR PDG A L+DAT+GAGGH ERFL PGLR+IGLDRD Sbjct 7 FGHVPVLLERCVELLAPALTRESPDGRGATLVDATLGAGGHTERFLSQFPGLRVIGLDRD 66 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 TAL++A +RL RFADRL V TRYD +GAAL E G A GSVDG+LFDLGVSSMQLDRA Sbjct 67 TTALEIAGTRLDRFADRLRTVRTRYDAIGAALTEVGLAPTGSVDGVLFDLGVSSMQLDRA 126 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGF+YA DAPLDMRMDP LTAA+IVNTYD AAL DILRR+GEERFA RIAA IVRRR Sbjct 127 ERGFSYAQDAPLDMRMDPEAELTAAEIVNTYDAAALTDILRRFGEERFASRIAAHIVRRR 186 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 ++TPFTST +L ALLY+AIPAPARR GGHPAKRTFQALRIAVN ELESLR+A+PAALDAL Sbjct 187 SQTPFTSTGQLTALLYEAIPAPARRTGGHPAKRTFQALRIAVNGELESLRSALPAALDAL 246 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 A+GGR+AV++YQSLEDRIVK++FA S TP LPVELPG PRF +LT GAERA E Sbjct 247 AVGGRVAVMSYQSLEDRIVKQLFAAVTTSRTPVDLPVELPGDRPRFTTLTRGAERAQPDE 306 Query 363 IERNPRSTPVRLRALQRV 380 +E NPR+ VRLRA+QRV Sbjct 307 VEHNPRAGSVRLRAVQRV 324 >gi|315443914|ref|YP_004076793.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. Spyr1] gi|315262217|gb|ADT98958.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. Spyr1] Length=353 Score = 446 bits (1147), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 245/374 (66%), Positives = 273/374 (73%), Gaps = 25/374 (6%) Query 7 WSLPEATLAYFPNARFVSSDRDLGAGAAPGIAASRSTACQTWGGITVADPGSGPTGFGHV 66 W L E L YFP+ RF +SDRDL AGAAP ++ Q HV Sbjct 2 WPLSEPALTYFPDVRFATSDRDLTAGAAPTPQSAAMVDDQP-----------------HV 44 Query 67 PVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPTAL 126 PVL RC ELL PALTR A L+DAT+GAGGH+ERFL PGLRLIGLDRDP AL Sbjct 45 PVLLDRCVELLAPALTR-----EGATLVDATLGAGGHSERFLTDFPGLRLIGLDRDPDAL 99 Query 127 DVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGF 186 +A RL FADR+TLV TRYD + A+ + AA GSVD ILFDLGVSSMQLDR ERGF Sbjct 100 RIAGERLAPFADRITLVRTRYDGIADAVRD---AAGGSVDAILFDLGVSSMQLDRVERGF 156 Query 187 AYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTP 246 +Y+TDAPLDMRMD LTAA ++N+YDE ALA +LR YGEE+FA RIAA IVRRRA TP Sbjct 157 SYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGEEKFAGRIAAFIVRRRAVTP 216 Query 247 FTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAIGG 306 FT+T ELV LLY AIPAPARR GGHPAKRTFQALRI VN ELESLR+A+PAAL AL G Sbjct 217 FTTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIEVNAELESLRSAIPAALQALRPHG 276 Query 307 RIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIERN 366 R+AV+AYQSLEDRIVK FA A AS TP GLPVELPGH P F +LT GAERA EIERN Sbjct 277 RLAVMAYQSLEDRIVKTAFAAATASRTPPGLPVELPGHGPEFVALTRGAERADAEEIERN 336 Query 367 PRSTPVRLRALQRV 380 PRS PVRLRA+++V Sbjct 337 PRSAPVRLRAVEKV 350 >gi|262831574|sp|A1TAX6.2|RSMH_MYCVP RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH Length=324 Score = 442 bits (1136), Expect = 6e-122, Method: Compositional matrix adjust. Identities = 231/316 (74%), Positives = 253/316 (81%), Gaps = 1/316 (0%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 H+PVL RC ELL PALTR DGS A L+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct 7 HIPVLLDRCVELLAPALTRTSTDGSGATLVDATLGAGGHSERFLTQFPALRLIGLDRDPD 66 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL +A RL RF DR+TLV TRYD + AA+AES AA G VD ILFDLGVSSMQLDR ER Sbjct 67 ALHIAGDRLARFGDRVTLVRTRYDGIAAAVAESNCAATG-VDAILFDLGVSSMQLDRVER 125 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GFAY+ DAPLDMRMD + LTAA ++NTYDE ALA +LR YGEE+FA RIAA IVRRRA Sbjct 126 GFAYSVDAPLDMRMDSGSDLTAAQVLNTYDEKALARVLRVYGEEKFAGRIAAQIVRRRAN 185 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 TPF++T ELV LLYQAIPAPARR GGHPAKRTFQALRI VN ELESLR A+PAAL+ L Sbjct 186 TPFSTTGELVELLYQAIPAPARRTGGHPAKRTFQALRIEVNAELESLRLAIPAALEVLRP 245 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GRIAV+AYQSLEDRIVK FA A AS TP GLPVELPGH PRF +LT GAERA EIE Sbjct 246 HGRIAVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHGPRFVALTRGAERADAEEIE 305 Query 365 RNPRSTPVRLRALQRV 380 RNPRS VRLRAL++V Sbjct 306 RNPRSASVRLRALEKV 321 >gi|126435853|ref|YP_001071544.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. JLS] gi|262825143|sp|A3Q1M6.1|RSMH_MYCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|126235653|gb|ABN99053.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. JLS] Length=324 Score = 426 bits (1095), Expect = 3e-117, Method: Compositional matrix adjust. Identities = 224/319 (71%), Positives = 247/319 (78%), Gaps = 6/319 (1%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 H+PVL RC ELLTPALTR PDG AVL+DAT+GAGGHA RFL LPGL LIGLDRDP Sbjct 3 HIPVLLDRCVELLTPALTRRNPDGRGAVLVDATLGAGGHAHRFLSDLPGLHLIGLDRDPQ 62 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL +A RL F DR++LV TRYD + ALA++G V V G LFDLGVSSMQLDR ER Sbjct 63 ALQIAGERLAPFGDRVSLVRTRYDGIDDALAQTG---VAEVSGFLFDLGVSSMQLDRTER 119 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GF+Y+ DAPLDMRMD PLTAAD+VNT+ E + ILR +GEERFA RIA IVRRR Sbjct 120 GFSYSADAPLDMRMDSDAPLTAADVVNTFAEKDITRILREFGEERFAARIAKHIVRRR-- 177 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 P +T ELV LLY AIPAPARR GGHPAKRTFQALRIAVN EL+SLR A+PAAL AL Sbjct 178 -PLNTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIAVNSELDSLRAAIPAALGALET 236 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GGRI V+AYQSLEDRIVK FA A AS TP GLPVELPGHEP F +LT GAERA+ EIE Sbjct 237 GGRIVVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHEPEFVALTRGAERATPEEIE 296 Query 365 RNPRSTPVRLRALQRVEHR 383 RNPRS PVRLRAL++V R Sbjct 297 RNPRSAPVRLRALEKVAGR 315 >gi|118468497|ref|YP_888512.1| S-adenosyl-methyltransferase MraW [Mycobacterium smegmatis str. MC2 155] gi|262825134|sp|A0R024.1|RSMH_MYCS2 RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|118169784|gb|ABK70680.1| S-adenosyl-methyltransferase MraW [Mycobacterium smegmatis str. MC2 155] Length=326 Score = 421 bits (1082), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 226/320 (71%), Positives = 257/320 (81%), Gaps = 3/320 (0%) Query 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 Query 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 Query 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 Query 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+SLR A+PAAL AL Sbjct 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSLRAAIPAALAALR 244 Query 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 GGRI V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct 245 PGGRIVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 Query 364 ERNPRSTPVRLRALQRVEHR 383 ERNPRS PVRLRAL++V R Sbjct 305 ERNPRSAPVRLRALEKVGGR 324 >gi|263460310|sp|A4TBF6.2|RSMH_MYCGI RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH Length=317 Score = 421 bits (1081), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 225/316 (72%), Positives = 249/316 (79%), Gaps = 8/316 (2%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 HVPVL RC ELL PALTR A L+DAT+GAGGH+ERFL PGLRLIGLDRDP Sbjct 7 HVPVLLDRCVELLAPALTR-----EGATLVDATLGAGGHSERFLTDFPGLRLIGLDRDPD 61 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL +A RL FADR+TLV TRYD + A+ + AA GSVD ILFDLGVSSMQLDR ER Sbjct 62 ALRIAGERLAPFADRITLVRTRYDGIADAVRD---AAGGSVDAILFDLGVSSMQLDRVER 118 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GF+Y+TDAPLDMRMD LTAA ++N+YDE ALA +LR YGEE+FA RIAA IVRRRA Sbjct 119 GFSYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGEEKFAGRIAAFIVRRRAV 178 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 TPFT+T ELV LLY AIPAPARR GGHPAKRTFQALRI VN ELESLR+A+PAAL AL Sbjct 179 TPFTTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIEVNAELESLRSAIPAALQALRP 238 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GR+AV+AYQSLEDRIVK FA A AS TP GLPVELPGH P F +LT GAERA EIE Sbjct 239 HGRLAVMAYQSLEDRIVKTAFAAATASRTPPGLPVELPGHGPEFVALTRGAERADAEEIE 298 Query 365 RNPRSTPVRLRALQRV 380 RNPRS PVRLRA+++V Sbjct 299 RNPRSAPVRLRAVEKV 314 >gi|312140150|ref|YP_004007486.1| SAM dependent methyltransferase [Rhodococcus equi 103S] gi|311889489|emb|CBH48806.1| SAM dependent methyltransferase MraW [Rhodococcus equi 103S] Length=390 Score = 414 bits (1065), Expect = 9e-114, Method: Compositional matrix adjust. Identities = 224/384 (59%), Positives = 266/384 (70%), Gaps = 9/384 (2%) Query 10 PEATLAYFPNARFV--------SSDRDLGAGAAPGIAASRSTACQTWGGITV-ADPGSGP 60 P+ TL +FP+ RF S+ +G G +T GGI V + G P Sbjct 7 PKVTLTHFPSVRFAAGTLTHFPSARSPIGQGPRGIRPPCTATHRGRVGGIMVDGEDGKVP 66 Query 61 TGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLD 120 FGHVPVL R +LL PA+T P G AV++DAT+G GGH+E FL PGL LIGLD Sbjct 67 GEFGHVPVLLNRADDLLGPAITADNPRGDGAVMIDATLGLGGHSEYFLRTYPGLHLIGLD 126 Query 121 RDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLD 180 RDP AL +A RL +ADR T VHTRYD + AL ++G VGSV ILFDLGVSSMQLD Sbjct 127 RDPEALRIASDRLAPYADRTTFVHTRYDGIVEALGQAGLDPVGSVHAILFDLGVSSMQLD 186 Query 181 RAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVR 240 A+RGFAY+ DAPLDMRM+PTT +TAA+++NTY LA IL YGEERFA RIA+ IVR Sbjct 187 EADRGFAYSIDAPLDMRMNPTTGITAAEVLNTYSHGELARILSTYGEERFAGRIASEIVR 246 Query 241 RRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALD 300 RR K PFT++A LV LLY IPA RR GGHPAKRTFQALR+ VN EL+SLR A+PA LD Sbjct 247 RRQKQPFTTSAALVELLYDTIPAATRRTGGHPAKRTFQALRVEVNGELDSLRDAIPAGLD 306 Query 301 ALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASV 360 ALA+GGR+ ++YQSLEDR+VK+ A S TP GLPVELPG P F+ LT GAERAS Sbjct 307 ALAVGGRVVFMSYQSLEDRVVKQELAPRAKSKTPEGLPVELPGMGPEFKILTRGAERASE 366 Query 361 AEIERNPRSTPVRLRALQRVEHRA 384 AEIE NPR+ PVRLRA +R+ +A Sbjct 367 AEIEDNPRAAPVRLRAAERIARKA 390 >gi|111018109|ref|YP_701081.1| S-adenosyl-methyltransferase MraW [Rhodococcus jostii RHA1] gi|123340963|sp|Q0SHR3.1|RSMH_RHOSR RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|110817639|gb|ABG92923.1| S-adenosyl-methyltransferase [Rhodococcus jostii RHA1] Length=338 Score = 409 bits (1051), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 210/328 (65%), Positives = 248/328 (76%), Gaps = 1/328 (0%) Query 58 SGPT-GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL 116 S PT GFGH+PVL R ELL PALT P G AV++DAT+G GGH+E FL P LRL Sbjct 9 SSPTDGFGHIPVLLHRADELLGPALTVNDPQGGGAVMIDATLGLGGHSEHFLRTYPQLRL 68 Query 117 IGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSS 176 I LDRDP AL++A RL FADR+T VHTRYD + AL ++G A SV GILFDLGVSS Sbjct 69 IALDRDPHALEIAGGRLAPFADRITFVHTRYDGIEDALDQAGLPAQESVHGILFDLGVSS 128 Query 177 MQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAA 236 MQLD ++RGFAY+ DAPLDMRMDPTT +TAA+++NTY LA IL YGEERFA +IA+ Sbjct 129 MQLDESDRGFAYSIDAPLDMRMDPTTGITAAEVLNTYSHGDLARILSTYGEERFAGKIAS 188 Query 237 GIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVP 296 IVR+RAK PFT++A LV LLY++IPA RR GGHPAKRTFQALR+ VN EL+SLR AVP Sbjct 189 EIVRQRAKEPFTTSAALVELLYRSIPAATRRTGGHPAKRTFQALRVEVNGELDSLRAAVP 248 Query 297 AALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAE 356 AALDAL +GGR+ ++YQSLEDR+VK+ S +P GLPVELPG P FR LT GAE Sbjct 249 AALDALTVGGRVVFMSYQSLEDRVVKQEITPRSKSKSPEGLPVELPGMGPEFRILTRGAE 308 Query 357 RASVAEIERNPRSTPVRLRALQRVEHRA 384 RAS E+E NPRS PVRLRA +R+ R+ Sbjct 309 RASEQEVEENPRSAPVRLRAAERIARRS 336 >gi|336441434|gb|AEI54942.1| S-adenosyl-methyltransferase [Mycobacterium franklinii] Length=331 Score = 409 bits (1051), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 211/324 (66%), Positives = 241/324 (75%), Gaps = 0/324 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 FGH+PV+ RC+ELL PALT DGS AVL+DAT+GAGGH E FL LPGL ++GLDRD Sbjct 8 FGHIPVMRDRCYELLAPALTVSSADGSGAVLVDATLGAGGHTEYFLTMLPGLTVVGLDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 ALD+AR+RL F R VHTRYD + AL GY A SVD +LFDLGVSSMQLD+A Sbjct 68 TNALDIARARLAHFGSRFIGVHTRYDGMADALDGLGYRATSSVDAVLFDLGVSSMQLDQA 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAY+ DAPLDMRM+ LTAADI+NTY L+ +L RYGEERFARRIA IVRRR Sbjct 128 ERGFAYSVDAPLDMRMNAQDELTAADILNTYSAVELSRVLSRYGEERFARRIADEIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 PFT + +LV LLY IPA RR GGHPAKRTFQALRIAVN ELESL A+P A+ AL Sbjct 188 DAEPFTRSGQLVELLYATIPAATRRTGGHPAKRTFQALRIAVNAELESLAGAIPTAMAAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 GGR+AV+AYQSLED+IVK F A AS +P LPVELP P FR++T GAERA AE Sbjct 248 RPGGRVAVMAYQSLEDKIVKAEFTAATASRSPIDLPVELPSDAPEFRAITRGAERADEAE 307 Query 363 IERNPRSTPVRLRALQRVEHRAQS 386 IE NPRS PVRLRA++RV R +S Sbjct 308 IEVNPRSAPVRLRAVERVGDRRKS 331 >gi|325676969|ref|ZP_08156641.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Rhodococcus equi ATCC 33707] gi|325552269|gb|EGD21959.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Rhodococcus equi ATCC 33707] Length=334 Score = 407 bits (1047), Expect = 1e-111, Method: Compositional matrix adjust. Identities = 209/328 (64%), Positives = 244/328 (75%), Gaps = 0/328 (0%) Query 57 GSGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL 116 G P FGHVPVL R +LL PA+T P G AV++DAT+G GGH+E FL PGL L Sbjct 7 GKVPGEFGHVPVLLNRADDLLGPAITADNPRGDGAVMIDATLGLGGHSEYFLRTYPGLHL 66 Query 117 IGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSS 176 IGLDRDP AL +A RL +ADR T VHTRYD + AL ++G VGSV ILFDLGVSS Sbjct 67 IGLDRDPEALRIASDRLAPYADRTTFVHTRYDGIVEALGQAGLDPVGSVHAILFDLGVSS 126 Query 177 MQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAA 236 MQLD A+RGFAY+ DAPLDMRM+PTT +TAA+++NTY LA IL YGEERFA RIA+ Sbjct 127 MQLDEADRGFAYSIDAPLDMRMNPTTGITAAEVLNTYSHGELARILSTYGEERFAGRIAS 186 Query 237 GIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVP 296 IVRRR K PFT++A LV LLY IPA RR GGHPAKRTFQALR+ VN EL+SLR A+P Sbjct 187 EIVRRRQKQPFTTSAALVELLYDTIPAATRRTGGHPAKRTFQALRVEVNGELDSLRDAIP 246 Query 297 AALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAE 356 A LDALA+GGR+ ++YQSLEDR+VK+ A S TP GLPVELPG P F+ LT GAE Sbjct 247 AGLDALAVGGRVVFMSYQSLEDRVVKQELAPRAKSKTPEGLPVELPGMGPEFKILTRGAE 306 Query 357 RASVAEIERNPRSTPVRLRALQRVEHRA 384 RAS AEIE NPR+ PVRLRA +R+ +A Sbjct 307 RASEAEIEDNPRAAPVRLRAAERIARKA 334 >gi|108800230|ref|YP_640427.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. MCS] gi|119869358|ref|YP_939310.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. KMS] gi|122976793|sp|Q1B6W3.1|RSMH_MYCSS RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|262825146|sp|A1UI62.1|RSMH_MYCSK RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|108770649|gb|ABG09371.1| methyltransferase [Mycobacterium sp. MCS] gi|119695447|gb|ABL92520.1| S-adenosyl-methyltransferase MraW [Mycobacterium sp. KMS] Length=324 Score = 407 bits (1045), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 225/319 (71%), Positives = 247/319 (78%), Gaps = 6/319 (1%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 H+PVL RC ELLTPALTR PDG AVL+DAT+GAGGHA RFL LPGL LIGLDRDP Sbjct 3 HIPVLLDRCVELLTPALTRRNPDGRGAVLVDATLGAGGHAHRFLSDLPGLHLIGLDRDPQ 62 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL +A RL F DR++LV TRYD + ALA++G V V G LFDLGVSSMQLDR ER Sbjct 63 ALQIAGERLAPFGDRVSLVRTRYDGIDDALAQTG---VAEVSGFLFDLGVSSMQLDRTER 119 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GF+Y+ DAPLDMRMD PLTAAD+VNT+ E + ILR +GEERFA RIA IVRRR Sbjct 120 GFSYSADAPLDMRMDSDAPLTAADVVNTFAEKDITRILREFGEERFAARIAKHIVRRR-- 177 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 P +T ELV LLY AIPAPARR GGHPAKRTFQALRIAVN EL+SLR AVPAAL AL Sbjct 178 -PLNTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIAVNSELDSLRAAVPAALAALET 236 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GGRI V+AYQSLEDRIVK FA A AS TP GLPVELPGHEP F +LT GAERA+ EIE Sbjct 237 GGRIVVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHEPEFVALTRGAERATPEEIE 296 Query 365 RNPRSTPVRLRALQRVEHR 383 RNPRS PVRLRAL++V R Sbjct 297 RNPRSAPVRLRALEKVAGR 315 >gi|226360238|ref|YP_002778016.1| S-adenosyl-methyltransferase MraW [Rhodococcus opacus B4] gi|262825479|sp|C1AU63.1|RSMH_RHOOB RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|226238723|dbj|BAH49071.1| methyltransferase MraW [Rhodococcus opacus B4] Length=338 Score = 405 bits (1041), Expect = 6e-111, Method: Compositional matrix adjust. Identities = 205/323 (64%), Positives = 244/323 (76%), Gaps = 0/323 (0%) Query 62 GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDR 121 GFGH+PVL R ELL PALT P G AV++DAT+G GGH+E FL P LRL+ LDR Sbjct 14 GFGHIPVLLHRADELLGPALTANDPHGGGAVMIDATLGLGGHSEHFLRTYPQLRLVALDR 73 Query 122 DPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDR 181 DP AL++A RL FADR+T VHTRYD + AL ++G + SV GILFDLGVSSMQLD Sbjct 74 DPHALEIAGGRLAPFADRITFVHTRYDGIEDALTQAGLSPRESVHGILFDLGVSSMQLDE 133 Query 182 AERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRR 241 ++RGFAY+ DAPLDMRMDPTT +TAA+++NTY LA IL YGEERFA +IA+ +VR+ Sbjct 134 SDRGFAYSIDAPLDMRMDPTTGITAAEVLNTYSHGDLARILSTYGEERFAGKIASEVVRQ 193 Query 242 RAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDA 301 RAK PFT++A LV LLY+ IPA RR GGHPAKRTFQALR+ VN EL+SLR AVPAALDA Sbjct 194 RAKEPFTTSAALVELLYRTIPAATRRTGGHPAKRTFQALRVEVNGELDSLRAAVPAALDA 253 Query 302 LAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVA 361 L +GGR+ ++YQSLEDR+VK+ S +P GLPVELPG P FR LT GAERAS Sbjct 254 LTVGGRVVFMSYQSLEDRVVKQEITPRSKSKSPEGLPVELPGMGPEFRILTRGAERASEQ 313 Query 362 EIERNPRSTPVRLRALQRVEHRA 384 EIE NPRS PVRLRA +R+ R+ Sbjct 314 EIEENPRSAPVRLRAAERIARRS 336 >gi|336441440|gb|AEI54945.1| S-adenosyl-methyltransferase [Mycobacterium immunogenum] Length=331 Score = 402 bits (1033), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 215/321 (67%), Positives = 243/321 (76%), Gaps = 0/321 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 FGHVPV+ +RC+ELL PALT DGS AVL+DAT+GAGGH E FL LPGL +IGLDRD Sbjct 8 FGHVPVMLERCYELLAPALTVGAADGSGAVLVDATLGAGGHTEHFLTMLPGLTVIGLDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 ALD+AR+RL F R VHTRYD L ALA GY SVDG+LFDLGVSSMQLD+A Sbjct 68 TNALDIARARLAPFGARFVGVHTRYDGLADALAGLGYRTTSSVDGVLFDLGVSSMQLDQA 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAY+ DAPLDMRM+ LTAADI+NTY A L+ +L R+GEERFARRIA IVRRR Sbjct 128 ERGFAYSVDAPLDMRMNAHDSLTAADILNTYSAAELSRVLSRFGEERFARRIADEIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 A PFT + +LV LLY IPA RR GGHPAKRTFQALRIAVN ELESL A+PAA+ AL Sbjct 188 ANEPFTRSGQLVELLYATIPAATRRTGGHPAKRTFQALRIAVNAELESLAAAIPAAMAAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 GGR+AV+AYQSLED+IVK F A AS +P LPVELPG P F ++T GAERA E Sbjct 248 RPGGRVAVMAYQSLEDKIVKAEFTAATASRSPIDLPVELPGDAPEFTAITRGAERAGETE 307 Query 363 IERNPRSTPVRLRALQRVEHR 383 IE NPRS PVRLRA++RV R Sbjct 308 IEVNPRSAPVRLRAVERVADR 328 >gi|336441442|gb|AEI54946.1| S-adenosyl-methyltransferase [Mycobacterium massiliense] Length=331 Score = 400 bits (1029), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 213/321 (67%), Positives = 242/321 (76%), Gaps = 0/321 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 +GH+PV+ RC+ELL PALT DGS AVL+DAT+GAGGH E FL LPGL +IGLDRD Sbjct 8 YGHIPVMLDRCYELLAPALTAGSADGSGAVLIDATLGAGGHTEHFLTMLPGLTVIGLDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 ALD+ARSRL F R VHTRYD L AL GY SVDG+LFDLGVSSMQLD+A Sbjct 68 TNALDIARSRLAPFGTRFVGVHTRYDGLADALDGLGYHTTSSVDGVLFDLGVSSMQLDQA 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAY+ DAPLDMRM+ LTAADI+NTY L+ +L R+GEERFARRIA IVRRR Sbjct 128 ERGFAYSVDAPLDMRMNAQDELTAADILNTYSAVELSRVLSRFGEERFARRIADEIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 A PFT + +LV LLY IPA RR GGHPAKRTFQALRIAVN ELESL A+PAA+ AL Sbjct 188 ANEPFTRSGQLVELLYATIPAATRRTGGHPAKRTFQALRIAVNAELESLAAAIPAAMAAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 GGR+AV+AYQSLED+IVK FA A AS +P LPVELPG P F ++T GAERA+ E Sbjct 248 RPGGRVAVMAYQSLEDKIVKAEFAAATASRSPIDLPVELPGDAPEFTAITRGAERANDEE 307 Query 363 IERNPRSTPVRLRALQRVEHR 383 IE NPRS PVRLRA++RV R Sbjct 308 IEVNPRSAPVRLRAVERVADR 328 >gi|169629085|ref|YP_001702734.1| S-adenosyl-methyltransferase MraW [Mycobacterium abscessus ATCC 19977] gi|263456523|sp|B1MP29.1|RSMH_MYCA9 RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|169241052|emb|CAM62080.1| S-adenosyl-methyltransferase MraW [Mycobacterium abscessus] gi|336441432|gb|AEI54941.1| S-adenosyl-methyltransferase [Mycobacterium abscessus] Length=331 Score = 400 bits (1028), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 214/321 (67%), Positives = 243/321 (76%), Gaps = 0/321 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 +GH+PV+ RC+ELL PALT DGS AVL+DAT+GAGGH E FL LPGL +IGLDRD Sbjct 8 YGHIPVMLDRCYELLAPALTADSTDGSGAVLVDATLGAGGHTEHFLTMLPGLTVIGLDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 ALD+ARSRL F R VHTRYD L AL GY SVDG+LFDLGVSSMQLD+A Sbjct 68 TNALDIARSRLAPFGTRFVGVHTRYDGLADALDGLGYRTTSSVDGVLFDLGVSSMQLDQA 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAY+ DAPLDMRM+ LTAADI+NTY L+ +L R+GEERFARRIA IVRRR Sbjct 128 ERGFAYSVDAPLDMRMNAQDELTAADILNTYSAVELSRVLSRFGEERFARRIADEIVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 A PFT + +LV LLY IPA RR GGHPAKRTFQALRIAVN ELESL TA+PAA+ AL Sbjct 188 ANEPFTRSGQLVELLYATIPAATRRTGGHPAKRTFQALRIAVNAELESLATAIPAAMAAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 GGR+AV+AYQSLED+IVK FA A AS +P LPVELPG P F ++T GAERA+ E Sbjct 248 RPGGRVAVMAYQSLEDKIVKAEFAAATASRSPIDLPVELPGDAPEFTAITRGAERANDEE 307 Query 363 IERNPRSTPVRLRALQRVEHR 383 IE NPRS PVRLRA++RV R Sbjct 308 IEVNPRSAPVRLRAVERVADR 328 >gi|336441436|gb|AEI54943.1| S-adenosyl-methyltransferase [Mycobacterium bolletii] Length=331 Score = 399 bits (1026), Expect = 3e-109, Method: Compositional matrix adjust. Identities = 212/321 (67%), Positives = 242/321 (76%), Gaps = 0/321 (0%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 +GH+PV+ RC+ELL PALT DGS AVL+DAT+GAGGH E FL LPGL +IGLDRD Sbjct 8 YGHIPVMLDRCYELLAPALTADSADGSGAVLIDATLGAGGHTEHFLTMLPGLTVIGLDRD 67 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 ALD+ARSRL F R VHTRYD L AL GY SVDG+LFDLGVSSMQLD+A Sbjct 68 TNALDIARSRLAPFGTRFVGVHTRYDGLADALDGLGYRTTSSVDGVLFDLGVSSMQLDQA 127 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAY+ DAPLDMRM+ LTAADI+NTY L+ +L R+GEERFARRIA +VRRR Sbjct 128 ERGFAYSVDAPLDMRMNAQDELTAADILNTYSAVELSRVLSRFGEERFARRIADEVVRRR 187 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 A PFT + +LV LLY IPA RR GGHPAKRTFQALRIAVN ELESL A+PAA+ AL Sbjct 188 ANEPFTRSGQLVELLYATIPAATRRTGGHPAKRTFQALRIAVNAELESLAAAIPAAMAAL 247 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 GGR+AV+AYQSLED+IVK FA A AS +P LPVELPG P F ++T GAERA+ E Sbjct 248 RPGGRVAVMAYQSLEDKIVKAEFAAATASRSPIDLPVELPGDAPEFTAITRGAERANDEE 307 Query 363 IERNPRSTPVRLRALQRVEHR 383 IE NPRS PVRLRA++RV R Sbjct 308 IEVNPRSAPVRLRAVERVADR 328 >gi|336441438|gb|AEI54944.1| S-adenosyl-methyltransferase [Mycobacterium chelonae] Length=337 Score = 398 bits (1022), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 214/327 (66%), Positives = 246/327 (76%), Gaps = 1/327 (0%) Query 57 GSGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL 116 GSG GFGH+PV+ RC+ELL PALT DG+ AVL+DAT+GAGGH E FL LPGL + Sbjct 9 GSG-AGFGHIPVMLDRCYELLAPALTARSADGAGAVLIDATLGAGGHTEHFLSVLPGLTV 67 Query 117 IGLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSS 176 IGLDRD AL++AR RL F +R VHTRYD L AL GY A SVD +LFDLGVSS Sbjct 68 IGLDRDTNALEIARKRLEAFGERFAGVHTRYDGLSDALDGLGYRATSSVDAVLFDLGVSS 127 Query 177 MQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAA 236 MQLD+A+RGFAY+ DAPLDMRM+ LTAADI+NTY L+ +L R+GEERFARRIA Sbjct 128 MQLDQADRGFAYSVDAPLDMRMNSHDELTAADILNTYTAPELSRVLSRFGEERFARRIAD 187 Query 237 GIVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVP 296 +VRRRA FT +A+LV LLY IPA RR GGHPAKRTFQALRIAVN ELESL A+P Sbjct 188 EVVRRRAVESFTHSAQLVELLYDTIPAATRRTGGHPAKRTFQALRIAVNAELESLAAAIP 247 Query 297 AALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAE 356 A+ AL GGRIAV+AYQSLED+IVK FA A+AS +P LPVELPG P F ++T GAE Sbjct 248 TAMAALRPGGRIAVMAYQSLEDKIVKAEFAAAIASRSPIDLPVELPGDAPEFAAITRGAE 307 Query 357 RASVAEIERNPRSTPVRLRALQRVEHR 383 RA AEIE NPRS PVRLRA++RV R Sbjct 308 RADDAEIEVNPRSAPVRLRAVERVADR 334 >gi|333918990|ref|YP_004492571.1| ribosomal RNA small subunit methyltransferase H [Amycolicicoccus subflavus DQS3-9A1] gi|333481211|gb|AEF39771.1| Ribosomal RNA small subunit methyltransferase H [Amycolicicoccus subflavus DQS3-9A1] Length=336 Score = 392 bits (1008), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 202/321 (63%), Positives = 239/321 (75%), Gaps = 0/321 (0%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 HVPV+A R EL TPA+T+ DG+ AVL+DAT+G GGHAERFL PGLR++GLDRD Sbjct 16 HVPVMADRAVELFTPAITQRAADGTGAVLVDATLGLGGHAERFLRDFPGLRVVGLDRDQR 75 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL ++R RL F DR+T VHTR+D + AL ++G A +VD ILFDLGVSSMQLD R Sbjct 76 ALSLSRERLAAFGDRVTFVHTRFDGIVTALDQAGLAQSEAVDAILFDLGVSSMQLDEKGR 135 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GFAY+ DAPLDMRMD TT LTAAD++NTY LA +L YGEERFA RIA+ IVR R + Sbjct 136 GFAYSIDAPLDMRMDTTTDLTAADVLNTYSRGQLARVLSVYGEERFAGRIASAIVRYREQ 195 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 PFT++A LV LLY AIPA ARR GGHPAKRTFQALRI VN EL++L + A ALA+ Sbjct 196 QPFTTSAPLVELLYGAIPAAARRTGGHPAKRTFQALRIEVNGELDALEKVIEPACAALAV 255 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GGR+A ++YQSLEDRIVKR A+ V S +P GLPV+LPG P FR LT GAERAS E Sbjct 256 GGRVAFMSYQSLEDRIVKRELAQRVKSRSPEGLPVDLPGTGPEFRLLTRGAERASETEAA 315 Query 365 RNPRSTPVRLRALQRVEHRAQ 385 NPRS PVRLRA +R+ R+Q Sbjct 316 TNPRSAPVRLRAAERIARRSQ 336 >gi|326382552|ref|ZP_08204243.1| S-adenosyl-methyltransferase MraW [Gordonia neofelifaecis NRRL B-59395] gi|326198671|gb|EGD55854.1| S-adenosyl-methyltransferase MraW [Gordonia neofelifaecis NRRL B-59395] Length=339 Score = 387 bits (994), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 197/317 (63%), Positives = 235/317 (75%), Gaps = 3/317 (0%) Query 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 GHVPV+A R F LL PALTR DG+ AVL+D T+GAGGH E FL+ L GL +I +DRD Sbjct 10 GHVPVMADRMFALLEPALTRVSADGTGAVLVDGTLGAGGHTEYFLDRLDGLYVIAIDRDT 69 Query 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 +A+ +A RL RF DR+ H RYD + + +G V DG+L DLGVSSMQLDRAE Sbjct 70 SAIGIASERLGRFGDRVEFHHNRYDEIEDVVHAAGRTVV---DGVLLDLGVSSMQLDRAE 126 Query 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 RGFAYA DAPLDMRM+ LTAADI+NTYD ALA +L YGEERFA +IA+ +VR RA Sbjct 127 RGFAYAVDAPLDMRMNADDELTAADILNTYDHGALARVLSEYGEERFAGKIASAVVRERA 186 Query 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 K PFT++ LV LLY IPA RR GGHPAKRTFQALRI VN EL+SLR +PA+L+ L Sbjct 187 KEPFTTSGRLVELLYATIPAATRRTGGHPAKRTFQALRIEVNHELDSLRGVIPASLEVLG 246 Query 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 IGGR+AV++YQSLEDRIVKR FA AV + TPAGLPV+LPG P F +T GAE+A AE Sbjct 247 IGGRLAVMSYQSLEDRIVKRDFARAVENTTPAGLPVDLPGTAPEFSLVTRGAEQADAAER 306 Query 364 ERNPRSTPVRLRALQRV 380 NPRS PVR+RA++R+ Sbjct 307 AANPRSAPVRIRAIERI 323 >gi|229490464|ref|ZP_04384305.1| S-adenosyl-methyltransferase MraW [Rhodococcus erythropolis SK121] gi|229322754|gb|EEN88534.1| S-adenosyl-methyltransferase MraW [Rhodococcus erythropolis SK121] Length=336 Score = 383 bits (984), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 200/326 (62%), Positives = 234/326 (72%), Gaps = 0/326 (0%) Query 58 SGPTGFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLI 117 S GF HVPVL R +LL PA+T G+ A ++DAT+G GGH+E FL PGL LI Sbjct 9 SDADGFAHVPVLLHRADDLLGPAITAVGDGGAGAYMIDATLGLGGHSEFFLGKYPGLHLI 68 Query 118 GLDRDPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSM 177 GLDRD AL +A RL FADR T VHT YD + AL ++G + SV ILFDLGVSSM Sbjct 69 GLDRDTNALRIASERLAPFADRTTFVHTTYDGIEDALEQAGLPSTESVHAILFDLGVSSM 128 Query 178 QLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAG 237 QLD A+RGFAY+ DAPLDMRMD T LTAA+++NTY LA IL YGEERFA +IA+ Sbjct 129 QLDEADRGFAYSIDAPLDMRMDQTVGLTAAEVLNTYSHGDLARILSTYGEERFAGKIASE 188 Query 238 IVRRRAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPA 297 I+R+R + PFT++A LV LLY+ IPA RR GGHPAKRTFQALRI VN EL+SLR AVPA Sbjct 189 ILRQREREPFTTSAALVELLYRTIPAATRRTGGHPAKRTFQALRIEVNAELDSLRAAVPA 248 Query 298 ALDALAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAER 357 LDALA+GGR+ ++YQSLEDR+VK S +P GLPVELPG P FR LT GAER Sbjct 249 GLDALAVGGRVVFMSYQSLEDRVVKAELVPRSKSTSPEGLPVELPGMGPEFRILTRGAER 308 Query 358 ASVAEIERNPRSTPVRLRALQRVEHR 383 AS EIE NPRS PVRLRA +R+ R Sbjct 309 ASEQEIEENPRSAPVRLRAAERISRR 334 >gi|226307047|ref|YP_002767007.1| methyltransferase MraW [Rhodococcus erythropolis PR4] gi|262825456|sp|C1A0Y3.1|RSMH_RHOE4 RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|226186164|dbj|BAH34268.1| methyltransferase MraW [Rhodococcus erythropolis PR4] Length=332 Score = 383 bits (983), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 199/322 (62%), Positives = 232/322 (73%), Gaps = 0/322 (0%) Query 62 GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDR 121 GF HVPVL R +LL PA+T G A ++DAT+G GGH+E FL PGL LIGLDR Sbjct 9 GFAHVPVLLHRADDLLGPAITAVGDGGEGAYMIDATLGLGGHSEFFLGKYPGLHLIGLDR 68 Query 122 DPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDR 181 D AL +A RL FADR T VHT YD + AL ++G + SV ILFDLGVSSMQLD Sbjct 69 DTNALRIASERLAPFADRTTFVHTTYDGIEDALEQAGLPSTESVHAILFDLGVSSMQLDE 128 Query 182 AERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRR 241 A+RGFAY+ DAPLDMRMD T LTAA+++NTY LA IL YGEERFA +IA+ I+R+ Sbjct 129 ADRGFAYSIDAPLDMRMDQTVGLTAAEVLNTYSHGDLARILSTYGEERFAGKIASEILRQ 188 Query 242 RAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDA 301 R + PFT++A LV LLY+ IPA RR GGHPAKRTFQALRI VN EL+SLR AVPA LDA Sbjct 189 REREPFTTSAALVELLYRTIPAATRRTGGHPAKRTFQALRIEVNAELDSLRAAVPAGLDA 248 Query 302 LAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVA 361 LA+GGR+ ++YQSLEDR+VK S +P GLPVELPG P FR LT GAERAS Sbjct 249 LAVGGRVVFMSYQSLEDRVVKAELVPRSKSTSPEGLPVELPGMGPEFRILTRGAERASEQ 308 Query 362 EIERNPRSTPVRLRALQRVEHR 383 EIE NPRS PVRLRA +R+ R Sbjct 309 EIEENPRSAPVRLRAAERISRR 330 >gi|262202917|ref|YP_003274125.1| S-adenosyl-methyltransferase MraW [Gordonia bronchialis DSM 43247] gi|262086264|gb|ACY22232.1| S-adenosyl-methyltransferase MraW [Gordonia bronchialis DSM 43247] Length=336 Score = 375 bits (962), Expect = 9e-102, Method: Compositional matrix adjust. Identities = 197/324 (61%), Positives = 237/324 (74%), Gaps = 9/324 (2%) Query 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 GH+PVLA R ELL P+L G + VL+DAT+GAGGHAE L P LRL+G+DRD Sbjct 15 GHLPVLAARMAELLAPSLE----SGDERVLVDATLGAGGHAELMLNRFPNLRLVGIDRDA 70 Query 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 AL +A RL ADR++L R+D L LA+ AA+ +DG LFDLGVSSMQLD+ Sbjct 71 HALAIAEKRLAPMADRISLHQARFDQLPQVLAD---AAIDGIDGALFDLGVSSMQLDQPG 127 Query 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 RGFAYA DAPLDMRM+ LTAAD++NTY LA +L YGEERFA RIA+ ++ R Sbjct 128 RGFAYAIDAPLDMRMNDEDGLTAADVLNTYSHGELARVLSEYGEERFAGRIASAVIAERE 187 Query 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 K PFT++A LVALLYQAIPA RR GGHPAKRTFQALRI VN EL+++R AVPAALDA Sbjct 188 KEPFTTSARLVALLYQAIPAATRRTGGHPAKRTFQALRIEVNHELDAIRAAVPAALDATR 247 Query 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 +GGR+AV++YQSLEDRI+KR FA S +P GLPVELPG PRFR +T GAER AE+ Sbjct 248 VGGRVAVMSYQSLEDRIIKREFATRTTSTSPRGLPVELPGTAPRFRLITRGAERPDAAEL 307 Query 364 ERNPRSTPVRLRALQRV--EHRAQ 385 ERNPRS PVR+R ++RV +H A+ Sbjct 308 ERNPRSAPVRVRVIERVAADHTAE 331 >gi|302528477|ref|ZP_07280819.1| MraW methylase [Streptomyces sp. AA4] gi|302437372|gb|EFL09188.1| MraW methylase [Streptomyces sp. AA4] Length=318 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 196/316 (63%), Positives = 224/316 (71%), Gaps = 8/316 (2%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 HVPVL R EL PAL AVL+DAT+G GGH++ L P LRLIGLDRDP Sbjct 7 HVPVLLDRIVELFAPALA-----DRDAVLVDATVGLGGHSDALLSAFPRLRLIGLDRDPA 61 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL+ + RL R DR+ LVHT YD L A++ G + VDGILFDLGVSSMQLDRAER Sbjct 62 ALERSAERLARHGDRVDLVHTVYDGLPEAVSGLG---LSRVDGILFDLGVSSMQLDRAER 118 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GFAY+ DAPLDMRMDPTT TAAD++NTY L ILR YGEERFA+RI +V R K Sbjct 119 GFAYSQDAPLDMRMDPTTGFTAADVLNTYAPGELIRILRDYGEERFAQRIVRAVVAEREK 178 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 PFT + LV LLY A+PA +RR GGHPAKRTFQALRI VN ELE LR A+PAAL LA+ Sbjct 179 EPFTRSGRLVELLYSAVPAASRRTGGHPAKRTFQALRIEVNGELEVLRRAMPAALGTLAM 238 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GRI V +YQSLEDR+VK+ AE S TP GLPVELPGH P + LT GAE+A +EIE Sbjct 239 NGRIVVESYQSLEDRLVKQALAERAKSRTPEGLPVELPGHGPELKLLTRGAEKAGESEIE 298 Query 365 RNPRSTPVRLRALQRV 380 NPR+ VRLRA QR+ Sbjct 299 HNPRAASVRLRAAQRI 314 >gi|300788105|ref|YP_003768396.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei U32] gi|299797619|gb|ADJ47994.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei U32] gi|340529690|gb|AEK44895.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei S699] Length=317 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 193/316 (62%), Positives = 221/316 (70%), Gaps = 8/316 (2%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 HVPVL R EL TP T VL+DAT+G GGH++ LE P LRL+ LDRDP Sbjct 6 HVPVLLSRIVELFTPVFT-----DRDGVLVDATVGLGGHSDALLEAFPRLRLVALDRDPA 60 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 AL+ + RL R DR+ VHT YD L AL G + DGILFDLGVSSMQLDRAER Sbjct 61 ALEKSAERLARHGDRVDFVHTVYDGLPEALESVG---LEKADGILFDLGVSSMQLDRAER 117 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GFAY+ D+PLDMRMDPTT TAAD++NTY L ILR YGEERFA+RI +V R K Sbjct 118 GFAYSKDSPLDMRMDPTTGFTAADVLNTYAPGELIRILRDYGEERFAQRIVKAVVAAREK 177 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 PFT++ LV LLY A+PA RR GGHPAKRTFQALRI VN ELE LR A+PAAL AL + Sbjct 178 EPFTTSGRLVELLYDAVPAATRRTGGHPAKRTFQALRIEVNGELEVLRRAMPAALGALPV 237 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GGRI V +YQSLEDR+VK+ AE S TP GLPVELPGH P + LT GAE+A EIE Sbjct 238 GGRIVVESYQSLEDRLVKQALAELAKSRTPEGLPVELPGHGPELKLLTRGAEKAGEEEIE 297 Query 365 RNPRSTPVRLRALQRV 380 RNPR+ VRLRA +R+ Sbjct 298 RNPRAASVRLRAAERI 313 >gi|54023726|ref|YP_117968.1| S-adenosyl-methyltransferase MraW [Nocardia farcinica IFM 10152] gi|115311586|sp|Q5YYY7.1|RSMH_NOCFA RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gi|54015234|dbj|BAD56604.1| putative methyltransferase [Nocardia farcinica IFM 10152] Length=324 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 200/320 (63%), Positives = 237/320 (75%), Gaps = 5/320 (1%) Query 62 GFGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDR 121 G HVPVL +R ELL PALT AV +DAT+G GGHAE FL PGLRL+GLDR Sbjct 7 GARHVPVLLERADELLGPALTE-----PGAVYVDATLGLGGHAEHFLTRYPGLRLVGLDR 61 Query 122 DPTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDR 181 D AL +A RL FA+R+TLVHTRYD + AL ++G GSV IL DLGVSSMQLD Sbjct 62 DTEALRLAGERLAPFAERITLVHTRYDGIADALGQAGLPPTGSVSAILMDLGVSSMQLDE 121 Query 182 AERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRR 241 AERGFAY+ DAPLDMRMDPT+ +TAAD++NTY LA +L+ YGEERFA +IA+ ++RR Sbjct 122 AERGFAYSVDAPLDMRMDPTSGITAADVLNTYSHGDLARVLKNYGEERFAGKIASEVIRR 181 Query 242 RAKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDA 301 RA PF ++ ELV LLY IPA ARR GGHPAKRTFQALR+ VN EL+SLR A+PAALDA Sbjct 182 RAHKPFETSGELVELLYATIPAAARRTGGHPAKRTFQALRVEVNGELDSLRAALPAALDA 241 Query 302 LAIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVA 361 L +GGRI V++YQSLEDR+VK+ A +S TP LPVELPG P FR LT GAE+A Sbjct 242 LRVGGRIVVMSYQSLEDRVVKQELAARTSSRTPVDLPVELPGMGPEFRLLTRGAEKAGER 301 Query 362 EIERNPRSTPVRLRALQRVE 381 EI NPR+ PVR+RA +R+E Sbjct 302 EIAENPRAAPVRMRAAERIE 321 >gi|296140350|ref|YP_003647593.1| S-adenosyl-methyltransferase MraW [Tsukamurella paurometabola DSM 20162] gi|296028484|gb|ADG79254.1| S-adenosyl-methyltransferase MraW [Tsukamurella paurometabola DSM 20162] Length=331 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 195/326 (60%), Positives = 233/326 (72%), Gaps = 8/326 (2%) Query 63 FGHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRD 122 +GHVPVLA R ELL PAL DG A+ +DAT+GAGGH+E L+ P R+IGLDRD Sbjct 8 YGHVPVLATRVRELLAPALAH---DG--AIYVDATLGAGGHSELILDTFPNARVIGLDRD 62 Query 123 PTALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRA 182 A D+A +RL RF R T VHTRYD + AAL + G + +VD ILFDLGVSSMQLDRA Sbjct 63 TDAHDIAGARLARFGGRFTAVHTRYDAIAAALDDLG---IETVDAILFDLGVSSMQLDRA 119 Query 183 ERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRR 242 ERGFAY+ DAPLDMRM+ PLTAAD++NTY LA IL+RYG+ERFA +IA+ +++ R Sbjct 120 ERGFAYSVDAPLDMRMNADDPLTAADVLNTYSHGDLARILQRYGDERFAGKIASAVLKER 179 Query 243 AKTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDAL 302 + PFT++ LV LLY IPAPARR GGHPAKRTFQALRI VN EL SL +AVP ALD L Sbjct 180 EREPFTTSGRLVELLYATIPAPARRTGGHPAKRTFQALRIEVNAELASLESAVPQALDVL 239 Query 303 AIGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAE 362 A GRI L+YQSLEDRIVK A S TPAGLP++LPG F LT GAERA+ E Sbjct 240 APEGRIVFLSYQSLEDRIVKAELAARTRSTTPAGLPMDLPGTGATFELLTRGAERATDEE 299 Query 363 IERNPRSTPVRLRALQRVEHRAQSQQ 388 I N R+ PVR+RA +R+ Q+ + Sbjct 300 IAENQRAAPVRMRAARRLATDTQTHR 325 >gi|325001098|ref|ZP_08122210.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudonocardia sp. P1] Length=337 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 199/315 (64%), Positives = 221/315 (71%), Gaps = 8/315 (2%) Query 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDPT 124 H PVL +R LL PA+ AV +DAT+G GGHA L P L ++GLDRDP Sbjct 16 HTPVLLERVSALLAPAIA-----DRPAVYVDATLGMGGHAAALLATHPQLTVVGLDRDPQ 70 Query 125 ALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAER 184 ALD+A RL +ADRL VH YD +G AL E+G VG D ILFDLGVSS+QLD ER Sbjct 71 ALDLAGRRLTAYADRLRPVHAVYDRIGEALDETG---VGPADAILFDLGVSSLQLDEVER 127 Query 185 GFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAK 244 GF+Y+ DA LDMRMDPTT TAAD++NTY L ILR YGEERFA IA IVR R K Sbjct 128 GFSYSRDADLDMRMDPTTGPTAADVLNTYTAPQLRRILREYGEERFAGPIANAIVRNRDK 187 Query 245 TPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALAI 304 PFT +AELV LLY +PA +RR GGHPAKRTFQALRI VN EL+ LR A+PAA DALA Sbjct 188 RPFTRSAELVELLYGVVPAASRRTGGHPAKRTFQALRIEVNAELDVLRDALPAAFDALAP 247 Query 305 GGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEIE 364 GGRI VLAY SLEDRI KR AE S TP LPVELPGHEP FR LT GAE AS EIE Sbjct 248 GGRIVVLAYHSLEDRITKRALAERTRSRTPLDLPVELPGHEPEFRLLTRGAETASDDEIE 307 Query 365 RNPRSTPVRLRALQR 379 RNPR+ PVRLRA +R Sbjct 308 RNPRAAPVRLRAAER 322 Lambda K H 0.320 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 776545622928 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40