BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2169c Length=134 Score E Sequences producing significant alignments: (Bits) Value gi|15609306|ref|NP_216685.1| transmembrane protein [Mycobacteriu... 262 1e-68 gi|289750763|ref|ZP_06510141.1| conserved membrane protein [Myco... 260 5e-68 gi|340627175|ref|YP_004745627.1| hypothetical protein MCAN_21911... 260 5e-68 gi|344219991|gb|AEN00622.1| transmembrane protein [Mycobacterium... 259 7e-68 gi|296166034|ref|ZP_06848483.1| transmembrane protein [Mycobacte... 237 4e-61 gi|240168227|ref|ZP_04746886.1| hypothetical protein MkanA1_0287... 237 5e-61 gi|118618806|ref|YP_907138.1| hypothetical protein MUL_3512 [Myc... 235 1e-60 gi|15827424|ref|NP_301687.1| hypothetical protein ML0904 [Mycoba... 228 2e-58 gi|118463363|ref|YP_881529.1| hypothetical protein MAV_2325 [Myc... 224 5e-57 gi|336461953|gb|EGO40805.1| Protein of unknown function (DUF3040... 222 2e-56 gi|41408005|ref|NP_960841.1| hypothetical protein MAP1907c [Myco... 219 1e-55 gi|108800232|ref|YP_640429.1| hypothetical protein Mmcs_3266 [My... 212 1e-53 gi|120404505|ref|YP_954334.1| putative transmembrane protein [My... 209 8e-53 gi|298525661|ref|ZP_07013070.1| conserved hypothetical protein [... 209 9e-53 gi|342859879|ref|ZP_08716532.1| hypothetical protein MCOL_13408 ... 205 2e-51 gi|145223565|ref|YP_001134243.1| hypothetical protein Mflv_2978 ... 204 3e-51 gi|254774997|ref|ZP_05216513.1| hypothetical protein MaviaA2_100... 203 8e-51 gi|118472897|ref|YP_888514.1| transmembrane protein [Mycobacteri... 201 2e-50 gi|254819738|ref|ZP_05224739.1| hypothetical protein MintA_07434... 197 5e-49 gi|333990373|ref|YP_004522987.1| transmembrane protein [Mycobact... 175 3e-42 gi|312140152|ref|YP_004007488.1| integral membrane protein [Rhod... 144 4e-33 gi|169629083|ref|YP_001702732.1| hypothetical protein MAB_1996 [... 141 3e-32 gi|333918987|ref|YP_004492568.1| transmembrane protein [Amycolic... 134 6e-30 gi|229490328|ref|ZP_04384169.1| conserved hypothetical protein [... 131 3e-29 gi|226360240|ref|YP_002778018.1| hypothetical protein ROP_08260 ... 128 2e-28 gi|111018111|ref|YP_701083.1| hypothetical protein RHA1_ro01098 ... 128 3e-28 gi|226307051|ref|YP_002767011.1| hypothetical protein RER_35640 ... 127 5e-28 gi|256379778|ref|YP_003103438.1| hypothetical protein Amir_5779 ... 124 3e-27 gi|343924200|ref|ZP_08763763.1| hypothetical protein GOALK_002_0... 124 6e-27 gi|302528485|ref|ZP_07280827.1| predicted protein [Streptomyces ... 119 2e-25 gi|296140352|ref|YP_003647595.1| hypothetical protein Tpau_2656 ... 115 3e-24 gi|328881800|emb|CCA55039.1| putative membrane protein [Streptom... 114 5e-24 gi|302533969|ref|ZP_07286311.1| conserved hypothetical protein [... 112 2e-23 gi|329940956|ref|ZP_08290236.1| putative membrane protein [Strep... 109 2e-22 gi|302546138|ref|ZP_07298480.1| putative membrane protein [Strep... 108 2e-22 gi|326440698|ref|ZP_08215432.1| hypothetical protein SclaA2_0650... 108 3e-22 gi|297194878|ref|ZP_06912276.1| conserved hypothetical protein [... 107 4e-22 gi|297199077|ref|ZP_06916474.1| conserved hypothetical protein [... 107 5e-22 gi|29832651|ref|NP_827285.1| hypothetical protein SAV_6109 [Stre... 106 9e-22 gi|345014470|ref|YP_004816824.1| hypothetical protein Strvi_7178... 105 2e-21 gi|320011274|gb|ADW06124.1| hypothetical protein Sfla_4723 [Stre... 105 2e-21 gi|302550809|ref|ZP_07303151.1| transmembrane protein [Streptomy... 105 2e-21 gi|290961143|ref|YP_003492325.1| hypothetical protein SCAB_67871... 105 3e-21 gi|182439201|ref|YP_001826920.1| hypothetical protein SGR_5408 [... 105 3e-21 gi|344999128|ref|YP_004801982.1| hypothetical protein SACTE_1526... 104 3e-21 gi|257056495|ref|YP_003134327.1| hypothetical protein Svir_25060... 103 6e-21 gi|337765227|emb|CCB73936.1| putative membrane protein [Streptom... 103 8e-21 gi|340529700|gb|AEK44905.1| transmembrane protein [Amycolatopsis... 103 9e-21 gi|262202919|ref|YP_003274127.1| hypothetical protein Gbro_3027 ... 103 1e-20 gi|302561112|ref|ZP_07313454.1| membrane protein [Streptomyces g... 102 2e-20 >gi|15609306|ref|NP_216685.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15841659|ref|NP_336696.1| hypothetical protein MT2225 [Mycobacterium tuberculosis CDC1551] gi|31793347|ref|NP_855840.1| transmembrane protein [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=134 Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF Sbjct 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|289750763|ref|ZP_06510141.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289691350|gb|EFD58779.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=134 Score = 260 bits (665), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 133/134 (99%), Positives = 133/134 (99%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFKETMIGSFPILSVFGFVVMFG VVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF Sbjct 61 AFKETMIGSFPILSVFGFVVMFGSVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|340627175|ref|YP_004745627.1| hypothetical protein MCAN_21911 [Mycobacterium canettii CIPT 140010059] gi|340005365|emb|CCC44523.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=134 Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 133/134 (99%), Positives = 133/134 (99%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFKETMIGSFPILSV GFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF Sbjct 61 AFKETMIGSFPILSVLGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|344219991|gb|AEN00622.1| transmembrane protein [Mycobacterium tuberculosis CTRI-2] Length=134 Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 133/134 (99%), Positives = 133/134 (99%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGA RQRRTKGAGGSF Sbjct 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGALRQRRTKGAGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|296166034|ref|ZP_06848483.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898599|gb|EFG78156.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=134 Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 120/134 (90%), Positives = 125/134 (94%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALF+IGL MLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFVIGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIGSFPILSVFGF+VMFGGVV+AITGPRL+GR D GSA G+ RQRR KG GGSF Sbjct 61 AFKATMIGSFPILSVFGFIVMFGGVVFAITGPRLAGRPDHPGSAPGSLRQRRNKGGGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|240168227|ref|ZP_04746886.1| hypothetical protein MkanA1_02872 [Mycobacterium kansasii ATCC 12478] Length=134 Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 119/134 (89%), Positives = 125/134 (94%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRML+QIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALF+IGL MLVSGV Sbjct 1 MPLSDHEQRMLEQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFVIGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIGSFPILSVFGFVVMFGGVVYAIT PRL GR+D A+G +RQRR+KGAGGSF Sbjct 61 AFKATMIGSFPILSVFGFVVMFGGVVYAITAPRLPGRLDHSRPASGGARQRRSKGAGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|118618806|ref|YP_907138.1| hypothetical protein MUL_3512 [Mycobacterium ulcerans Agy99] gi|183983194|ref|YP_001851485.1| hypothetical protein MMAR_3204 [Mycobacterium marinum M] gi|118570916|gb|ABL05667.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] gi|183176520|gb|ACC41630.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=134 Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 119/134 (89%), Positives = 126/134 (95%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRML+QIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALF+IGL MLVSGV Sbjct 1 MPLSDHEQRMLEQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFVIGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIGSFPILSVFGFVVMFGGVV+AI+GPRLSGR+D A+G SRQRR KG+GGSF Sbjct 61 AFKATMIGSFPILSVFGFVVMFGGVVFAISGPRLSGRVDHSRPASGTSRQRRGKGSGGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|15827424|ref|NP_301687.1| hypothetical protein ML0904 [Mycobacterium leprae TN] gi|221229901|ref|YP_002503317.1| hypothetical protein MLBr_00904 [Mycobacterium leprae Br4923] gi|3080483|emb|CAA18678.1| hypothetical protein MLCB268.12c [Mycobacterium leprae] gi|13092974|emb|CAC31285.1| probable membrane protein [Mycobacterium leprae] gi|219933008|emb|CAR70999.1| probable membrane protein [Mycobacterium leprae Br4923] Length=134 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 116/134 (87%), Positives = 120/134 (90%), Gaps = 0/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKF SSVRGGG R PTARRR QGAALF+IGLGMLV GV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFVSSVRGGGLRVPTARRRTQGAALFVIGLGMLVCGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIGSFPILSVFGFVVMFGGV++AITG RLSGR D G A G SRQRR+KGA GSF Sbjct 61 AFKATMIGSFPILSVFGFVVMFGGVLFAITGSRLSGREDHPGLAPGTSRQRRSKGAAGSF 120 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 121 TSRMEDRFRRRFDE 134 >gi|118463363|ref|YP_881529.1| hypothetical protein MAV_2325 [Mycobacterium avium 104] gi|118164650|gb|ABK65547.1| conserved hypothetical protein [Mycobacterium avium 104] Length=133 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 114/134 (86%), Positives = 122/134 (92%), Gaps = 1/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQG ALF+IGL MLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVIGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIG+FPILSVFGF+VMFGGVV+AITGPRL GR D GSA + RQRR + +GGSF Sbjct 61 AFKATMIGNFPILSVFGFIVMFGGVVFAITGPRLPGRPDLSGSAPTSLRQRRNR-SGGSF 119 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFD+ Sbjct 120 TSRMEDRFRRRFDD 133 >gi|336461953|gb|EGO40805.1| Protein of unknown function (DUF3040) [Mycobacterium avium subsp. paratuberculosis S397] Length=133 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 113/134 (85%), Positives = 121/134 (91%), Gaps = 1/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQG ALF+IGL MLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVIGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIG+FPILSVFGF+VMFGGVV+AITGPRL GR D G A + RQRR + +GGSF Sbjct 61 AFKATMIGNFPILSVFGFIVMFGGVVFAITGPRLPGRPDLSGPAPTSLRQRRNR-SGGSF 119 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFD+ Sbjct 120 TSRMEDRFRRRFDD 133 >gi|41408005|ref|NP_960841.1| hypothetical protein MAP1907c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396360|gb|AAS04224.1| hypothetical protein MAP_1907c [Mycobacterium avium subsp. paratuberculosis K-10] Length=133 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 112/134 (84%), Positives = 120/134 (90%), Gaps = 1/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGG FRAPTARRRLQG ALF+IGL MLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGRFRAPTARRRLQGVALFVIGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 AFK TMIG+FPILSVFGF+VMFGGVV+AITGPRL GR D G A + RQRR + +GGSF Sbjct 61 AFKATMIGNFPILSVFGFIVMFGGVVFAITGPRLPGRPDLSGPAPTSLRQRRNR-SGGSF 119 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFD+ Sbjct 120 TSRMEDRFRRRFDD 133 >gi|108800232|ref|YP_640429.1| hypothetical protein Mmcs_3266 [Mycobacterium sp. MCS] gi|119869360|ref|YP_939312.1| hypothetical protein Mkms_3328 [Mycobacterium sp. KMS] gi|126435855|ref|YP_001071546.1| hypothetical protein Mjls_3277 [Mycobacterium sp. JLS] gi|108770651|gb|ABG09373.1| putative conserved transmembrane protein [Mycobacterium sp. MCS] gi|119695449|gb|ABL92522.1| putative conserved transmembrane protein [Mycobacterium sp. KMS] gi|126235655|gb|ABN99055.1| putative conserved transmembrane protein [Mycobacterium sp. JLS] Length=136 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 110/136 (81%), Positives = 120/136 (89%), Gaps = 2/136 (1%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGG RAP+ARRRLQGAALF++GL MLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGTLRAPSARRRLQGAALFVVGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGG-SAAGASRQRRTKGA-GG 118 AFK TMIGSFPILSV GF+VMFGGVV+AITGPR++G DR G +RQ+R KG+ GG Sbjct 61 AFKATMIGSFPILSVIGFIVMFGGVVFAITGPRVAGGRDRSAPPVGGGARQKRPKGSGGG 120 Query 119 SFTSRMEDRFRRRFDE 134 SFTSRMEDRFRRRFDE Sbjct 121 SFTSRMEDRFRRRFDE 136 >gi|120404505|ref|YP_954334.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1] gi|119957323|gb|ABM14328.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii PYR-1] Length=134 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 106/135 (79%), Positives = 119/135 (89%), Gaps = 2/135 (1%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGG RAP+ RRRLQGAALF++GL MLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGTLRAPSTRRRLQGAALFVLGLAMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAG-ASRQRRTKGAGGS 119 AFK T IGS P+LSV GF+VMFGGVV+AITGPR++ ++DR A G A+RQ+R KG GGS Sbjct 61 AFKATWIGSLPVLSVIGFIVMFGGVVFAITGPRVA-KVDRAPGAGGSAARQKRAKGGGGS 119 Query 120 FTSRMEDRFRRRFDE 134 FTSRMEDRFRRRFD+ Sbjct 120 FTSRMEDRFRRRFDD 134 >gi|298525661|ref|ZP_07013070.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495455|gb|EFI30749.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=180 Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAG 106 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAG Sbjct 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAG 106 >gi|342859879|ref|ZP_08716532.1| hypothetical protein MCOL_13408 [Mycobacterium colombiense CECT 3035] gi|342133011|gb|EGT86231.1| hypothetical protein MCOL_13408 [Mycobacterium colombiense CECT 3035] Length=124 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 106/125 (85%), Positives = 113/125 (91%), Gaps = 1/125 (0%) Query 10 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGVAFKETMIGS 69 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQG ALF+IGL MLVSGVAFK TMIG+ Sbjct 1 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVIGLAMLVSGVAFKATMIGN 60 Query 70 FPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSFTSRMEDRFR 129 FPILSVFGF+VMFGGV++AITGPRLSGR D G A + RQRR KG GGSFTSRMEDRFR Sbjct 61 FPILSVFGFIVMFGGVIFAITGPRLSGRPDPSGPAPTSLRQRRNKG-GGSFTSRMEDRFR 119 Query 130 RRFDE 134 RRFD+ Sbjct 120 RRFDD 124 >gi|145223565|ref|YP_001134243.1| hypothetical protein Mflv_2978 [Mycobacterium gilvum PYR-GCK] gi|315443912|ref|YP_004076791.1| hypothetical protein Mspyr1_23110 [Mycobacterium sp. Spyr1] gi|145216051|gb|ABP45455.1| putative conserved transmembrane protein [Mycobacterium gilvum PYR-GCK] gi|315262215|gb|ADT98956.1| hypothetical protein Mspyr1_23110 [Mycobacterium sp. Spyr1] Length=133 Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 100/134 (75%), Positives = 115/134 (86%), Gaps = 1/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGG RAP+ RRRLQG ALF++GL MLV+GV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGTLRAPSTRRRLQGVALFVLGLAMLVAGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 A+ T IGS P+LSV GF+VMFGGV++AITGPR+S + +R + A RQ+R KG+GGSF Sbjct 61 AWNATWIGSLPVLSVIGFIVMFGGVIFAITGPRVS-KGERVPNDLAAQRQKRAKGSGGSF 119 Query 121 TSRMEDRFRRRFDE 134 TSRMEDRFRRRFDE Sbjct 120 TSRMEDRFRRRFDE 133 >gi|254774997|ref|ZP_05216513.1| hypothetical protein MaviaA2_10034 [Mycobacterium avium subsp. avium ATCC 25291] Length=124 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 105/125 (84%), Positives = 113/125 (91%), Gaps = 1/125 (0%) Query 10 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGVAFKETMIGS 69 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQG ALF+IGL MLVSGVAFK TMIG+ Sbjct 1 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVIGLAMLVSGVAFKATMIGN 60 Query 70 FPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSFTSRMEDRFR 129 FPILSVFGF+VMFGGVV+AITGPRL GR D GSA + RQRR + +GGSFTSRMEDRFR Sbjct 61 FPILSVFGFIVMFGGVVFAITGPRLPGRPDLSGSAPTSLRQRRNR-SGGSFTSRMEDRFR 119 Query 130 RRFDE 134 RRFD+ Sbjct 120 RRFDD 124 >gi|118472897|ref|YP_888514.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118174184|gb|ABK75080.1| probable conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=133 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/134 (74%), Positives = 116/134 (87%), Gaps = 1/134 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLDQIESALYAEDPKFASSVRGG RAP+ARRR+ GA LF++GL MLV+GV Sbjct 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGTLRAPSARRRIYGAGLFVLGLAMLVTGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 A K MIG FPILSV GF+VMFGGVV+AITGPR++G +D+ + +G +RQR+ +G GGSF Sbjct 61 AVKALMIGGFPILSVIGFIVMFGGVVFAITGPRVAGGVDKSSAPSGPTRQRKQRG-GGSF 119 Query 121 TSRMEDRFRRRFDE 134 T+RMEDRFRRRFD Sbjct 120 TNRMEDRFRRRFDN 133 >gi|254819738|ref|ZP_05224739.1| hypothetical protein MintA_07434 [Mycobacterium intracellulare ATCC 13950] Length=125 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 104/126 (83%), Positives = 111/126 (89%), Gaps = 2/126 (1%) Query 10 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGVAFKETMI-G 68 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQG ALF++GL MLVSGVAFK T I G Sbjct 1 MLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVVGLAMLVSGVAFKATWIGG 60 Query 69 SFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSFTSRMEDRF 128 S PILS+FGF+VMFGGVV+ ITGPRLSGR D GSA + RQRR KG GGSFTSRMEDRF Sbjct 61 SVPILSIFGFIVMFGGVVFGITGPRLSGRPDHSGSAPTSLRQRRNKG-GGSFTSRMEDRF 119 Query 129 RRRFDE 134 RRRFD+ Sbjct 120 RRRFDD 125 >gi|333990373|ref|YP_004522987.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333486341|gb|AEF35733.1| transmembrane protein [Mycobacterium sp. JDM601] Length=133 Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 91/133 (69%), Positives = 103/133 (78%), Gaps = 1/133 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLSDHEQRMLD+IESALYAEDPKFASSVRGG R PT RRR+QG A+F+ GL MLVSG+ Sbjct 1 MPLSDHEQRMLDEIESALYAEDPKFASSVRGGALRTPTTRRRVQGMAMFLTGLVMLVSGI 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 F T+ F ILSV GFVVMFGGVV+AITG + D G + G S+QRR KG G+F Sbjct 61 PFYSTVNPGFLILSVVGFVVMFGGVVFAITGNHATAVGD-GVAKTGGSQQRRVKGGSGTF 119 Query 121 TSRMEDRFRRRFD 133 SRMEDRFRRRF+ Sbjct 120 ASRMEDRFRRRFE 132 >gi|312140152|ref|YP_004007488.1| integral membrane protein [Rhodococcus equi 103S] gi|325676966|ref|ZP_08156638.1| transmembrane protein [Rhodococcus equi ATCC 33707] gi|311889491|emb|CBH48808.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325552266|gb|EGD21956.1| transmembrane protein [Rhodococcus equi ATCC 33707] Length=146 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 81/145 (56%), Positives = 103/145 (72%), Gaps = 11/145 (7%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFAS+VRGG R +++RRLQ AALF++GL +L+ GV Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASTVRGGRIRVASSKRRLQAAALFVLGLVLLIVGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFG-GVVYAITGPR-----LSGRMDRGGSAAGASR---QR 111 A +G FPI+SV GFVVMFG GV++ + G + + D G A A+R QR Sbjct 61 AVDVLRLGDFPIVSVIGFVVMFGAGVLFLVGGGKSHLAAVPDGDDSGSGGADANRGSHQR 120 Query 112 RTKGA--GGSFTSRMEDRFRRRFDE 134 + G G F+SRMEDRFR+RF++ Sbjct 121 KPHGGKKSGGFSSRMEDRFRKRFEQ 145 >gi|169629083|ref|YP_001702732.1| hypothetical protein MAB_1996 [Mycobacterium abscessus ATCC 19977] gi|169241050|emb|CAM62078.1| Conserved hypothetical transmembrane protein [Mycobacterium abscessus] Length=134 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/120 (67%), Positives = 88/120 (74%), Gaps = 0/120 (0%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFASSVRGG A + RRRLQGAALF IGL MLV GV Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASSVRGGRLGATSGRRRLQGAALFCIGLAMLVIGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 A T +G+FP+LSV GFVVMFG V+AI G R S G A GA+ + R A GSF Sbjct 61 AVPATQVGNFPVLSVTGFVVMFGAAVFAIIGSRRSEANPAGQGAGGAASRVRKNRAAGSF 120 >gi|333918987|ref|YP_004492568.1| transmembrane protein [Amycolicicoccus subflavus DQS3-9A1] gi|333481208|gb|AEF39768.1| Transmembrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=146 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/147 (50%), Positives = 98/147 (67%), Gaps = 14/147 (9%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+QIESALYAEDPKFAS VR R + RRRLQ AA+F++GL +L++GV Sbjct 1 MPLSEHEQRMLEQIESALYAEDPKFASQVRTASTRGASPRRRLQVAAIFLLGLVLLIAGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPR---LSGRMDRGGSAAGASRQ------- 110 A +G FPILS+ GF+VMFG V+A+ G G + +GAS + Sbjct 61 ALP-LKLGDFPILSLVGFLVMFGAGVWALAGNHQRTADGEGQEASTDSGASGKQGGKKPQ 119 Query 111 ---RRTKGAGGSFTSRMEDRFRRRFDE 134 R+ +G+ SF+ RME+RFR+RF++ Sbjct 120 PGARKPRGSSESFSKRMEERFRKRFEQ 146 >gi|229490328|ref|ZP_04384169.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229322618|gb|EEN88398.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=148 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/148 (55%), Positives = 101/148 (69%), Gaps = 15/148 (10%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFAS+VRGG RAP++RRR Q AALF++GL +L++GV Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASNVRGGRMRAPSSRRRFQAAALFVLGLVLLIAGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFG-GVVYAITGPRLSGRMDRGGSAAG------------- 106 A G FPI+S+FGF+ MFG GV++ G R S S G Sbjct 61 ALP-LKPGGFPIISLFGFLFMFGAGVLFLWGGGRKSAPAADSASEGGNHPSGPPGRGSAG 119 Query 107 ASRQRRTKGAGGSFTSRMEDRFRRRFDE 134 S + R + +GG F+SRMEDRF+RRF++ Sbjct 120 GSGRGRGRKSGGGFSSRMEDRFKRRFEQ 147 >gi|226360240|ref|YP_002778018.1| hypothetical protein ROP_08260 [Rhodococcus opacus B4] gi|226238725|dbj|BAH49073.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=142 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/142 (55%), Positives = 98/142 (70%), Gaps = 9/142 (6%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFAS+VRGG RA ++RRRLQ ALF++GL +L++GV Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASTVRGGRMRAASSRRRLQAVALFVLGLVLLIAGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAIT--GPRLSGRMDRGGSAAGASRQRRTKG--- 115 A G FP++S+ GF+VMFG V + G SG+ RGGS R +G Sbjct 61 ALP-IKPGGFPVISLIGFIVMFGAGVLLLWGGGKSKSGQSSRGGSTTQGETGRAERGKPR 119 Query 116 ---AGGSFTSRMEDRFRRRFDE 134 G F+SRMEDRF++RF++ Sbjct 120 SGRKSGGFSSRMEDRFKKRFEQ 141 >gi|111018111|ref|YP_701083.1| hypothetical protein RHA1_ro01098 [Rhodococcus jostii RHA1] gi|110817641|gb|ABG92925.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=142 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/142 (55%), Positives = 98/142 (70%), Gaps = 9/142 (6%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFAS+VRGG RA ++RRRLQ ALF++GL +L++GV Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASTVRGGRMRAASSRRRLQAVALFVLGLVLLIAGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAIT--GPRLSGRMDRGGSAAGASRQRRTKG--- 115 A G FP++S+ GF+VMFG V + G SG+ RGGS R +G Sbjct 61 ALP-IKPGGFPVISLIGFIVMFGAGVLLLWGGGKSKSGQSSRGGSTTQGETGRADRGKPR 119 Query 116 ---AGGSFTSRMEDRFRRRFDE 134 G F+SRMEDRF++RF++ Sbjct 120 SGRKSGGFSSRMEDRFKKRFEQ 141 >gi|226307051|ref|YP_002767011.1| hypothetical protein RER_35640 [Rhodococcus erythropolis PR4] gi|226186168|dbj|BAH34272.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=148 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 79/148 (54%), Positives = 100/148 (68%), Gaps = 15/148 (10%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFAS+VRGG RAP++RRR Q AALF++GL +L++GV Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASNVRGGRMRAPSSRRRFQAAALFVLGLVLLIAGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFG-GVVYAITGPRLSGRMDRGGSAAGAS----------- 108 A G FPI+S+FGF+ MFG GV++ G R S S G Sbjct 61 ALP-LKPGGFPIISLFGFLFMFGAGVLFLWGGGRKSAAAAEPASEGGNHPSGPPGRGSAG 119 Query 109 --RQRRTKGAGGSFTSRMEDRFRRRFDE 134 + R + +GG F+SRMEDRF+RRF++ Sbjct 120 GSGRGRGRKSGGGFSSRMEDRFKRRFEQ 147 >gi|256379778|ref|YP_003103438.1| hypothetical protein Amir_5779 [Actinosynnema mirum DSM 43827] gi|255924081|gb|ACU39592.1| hypothetical protein Amir_5779 [Actinosynnema mirum DSM 43827] Length=128 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/133 (50%), Positives = 90/133 (68%), Gaps = 7/133 (5%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQR+LDQIE ALYAEDPKFAS+VRG R P+ RRR+ G LF +G+ +LV+GV Sbjct 1 MPLSEHEQRLLDQIERALYAEDPKFASTVRGAKLRKPSRRRRIYGIVLFAVGVALLVTGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 + + P++SV GF++MF GV+ +T R R ++G A R T + SF Sbjct 61 MLPK--LAGIPVVSVVGFLMMFFGVLLTVTTLR---RGEQGAEEPEAQGSRPT--SRSSF 113 Query 121 TSRMEDRFRRRFD 133 + +ME+RFRRRF+ Sbjct 114 SQKMEERFRRRFE 126 >gi|343924200|ref|ZP_08763763.1| hypothetical protein GOALK_002_01540 [Gordonia alkanivorans NBRC 16433] gi|343766005|dbj|GAA10689.1| hypothetical protein GOALK_002_01540 [Gordonia alkanivorans NBRC 16433] Length=132 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/135 (52%), Positives = 93/135 (69%), Gaps = 5/135 (3%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+QIESALYAEDPKFASSV+ + RRRLQ A+F++GL MLV G+ Sbjct 1 MPLSEHEQRMLEQIESALYAEDPKFASSVKRRRLGKSSGRRRLQAVAIFVVGLVMLVGGL 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRT-KGAGGS 119 K IG FPI+S+ GF+VMFG ++A+ G L+ D SA A ++++ G+ Sbjct 61 IVK-IDIGGFPIVSLLGFLVMFGAGLFALWGDDLA---DSATSAPRAGGKKQSGSGSKRK 116 Query 120 FTSRMEDRFRRRFDE 134 + RME+RF RRF++ Sbjct 117 LSERMEERFNRRFEQ 131 >gi|302528485|ref|ZP_07280827.1| predicted protein [Streptomyces sp. AA4] gi|302437380|gb|EFL09196.1| predicted protein [Streptomyces sp. AA4] Length=133 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/140 (52%), Positives = 90/140 (65%), Gaps = 16/140 (11%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQR+LDQIE LYAEDPKFAS+VRG R P RRR+QG ALF++G+ +LV GV Sbjct 1 MPLSEHEQRLLDQIERELYAEDPKFASTVRGTRLRRPARRRRIQGIALFVVGVALLVLGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGG-- 118 + P++SV GF+VMF GV+ A+T R S D GG + G GG Sbjct 61 VIPVLRVADVPVVSVLGFLVMFFGVMMAVTSLRHS---DSGG------KDSHDDGGGGKP 111 Query 119 -----SFTSRMEDRFRRRFD 133 SFT RME+RFR+RF+ Sbjct 112 TGRKSSFTQRMEERFRQRFE 131 >gi|296140352|ref|YP_003647595.1| hypothetical protein Tpau_2656 [Tsukamurella paurometabola DSM 20162] gi|296028486|gb|ADG79256.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=137 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/138 (51%), Positives = 86/138 (63%), Gaps = 8/138 (5%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRMLDQIESALYAEDPKFAS+VRGG +RR+ A F +GL +L++G+ Sbjct 1 MPLSEHEQRMLDQIESALYAEDPKFASNVRGGRLGGAVGKRRVVAAIGFAVGLMLLIAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAI-TGPRLSGR----MDRGGSAAGASRQRRTKG 115 + I+ + GF++MFG VVY GP SG D G R R +K Sbjct 61 LLSQVQYTV--IVGIAGFLLMFGSVVYLFWAGPSSSGPRGTVADDGTVRESNGRGRSSKA 118 Query 116 A-GGSFTSRMEDRFRRRF 132 A G SF +RMEDRFRRRF Sbjct 119 ASGSSFVARMEDRFRRRF 136 >gi|328881800|emb|CCA55039.1| putative membrane protein [Streptomyces venezuelae ATCC 10712] Length=134 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 65/140 (47%), Positives = 90/140 (65%), Gaps = 18/140 (12%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITG----PRLSGRMDRGGSAAG--ASRQRRTK 114 ++ I SV GF+VM G V A+TG P+ + RGG AAG +RQRR Sbjct 61 VAQQIWI------SVVGFLVMLGCAVLAVTGWRKAPKPGEQQARGGVAAGGRQTRQRR-- 112 Query 115 GAGGSFTSRMEDRFRRRFDE 134 S +R+E+R++RR DE Sbjct 113 ----SMMNRIEERWQRRRDE 128 >gi|302533969|ref|ZP_07286311.1| conserved hypothetical protein [Streptomyces sp. C] gi|302442864|gb|EFL14680.1| conserved hypothetical protein [Streptomyces sp. C] Length=133 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/143 (45%), Positives = 88/143 (62%), Gaps = 22/143 (15%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q ++G+ +L++GV Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVVGIVVGIALLMTGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPR---------LSGRMDRGGSAAGASRQR 111 ++E + +SV GF+VM V +TG R +SG GGSA G +RQR Sbjct 61 IWQEVL-----WISVVGFLVMLACTVLVVTGWRKAPKPGEQPVSG--SAGGSARGRNRQR 113 Query 112 RTKGAGGSFTSRMEDRFRRRFDE 134 R S +R+E+R++RR DE Sbjct 114 R------SMMNRIEERWQRRRDE 130 >gi|329940956|ref|ZP_08290236.1| putative membrane protein [Streptomyces griseoaurantiacus M045] gi|329300250|gb|EGG44148.1| putative membrane protein [Streptomyces griseoaurantiacus M045] Length=128 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/137 (46%), Positives = 84/137 (62%), Gaps = 15/137 (10%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSALRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLS---GRMDRGGSAAGASRQRRTKGAG 117 ++ + SV GF+VM G V A+TG R + G G AA SRQRR Sbjct 61 VAQQIWV------SVVGFLVMLGCAVLAVTGWRKAPKPGEQAAGPPAARQSRQRR----- 109 Query 118 GSFTSRMEDRFRRRFDE 134 S R+E R++RR DE Sbjct 110 -SMMDRIEQRWQRRRDE 125 >gi|302546138|ref|ZP_07298480.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302463756|gb|EFL26849.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653] Length=131 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/134 (45%), Positives = 81/134 (61%), Gaps = 6/134 (4%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L+ GV Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATTLEGSGLRTYTRRRVYQAVAGFLVGIALLMVGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 + I SV GF++M G V A+TG R + + A GA RR S Sbjct 61 IVPQIWI------SVVGFLIMLGCAVLAVTGWRKAPKPGEAQRAGGAGPPRRQGRQRRSM 114 Query 121 TSRMEDRFRRRFDE 134 R+E+R++RR DE Sbjct 115 MDRIEERWQRRRDE 128 >gi|326440698|ref|ZP_08215432.1| hypothetical protein SclaA2_06508 [Streptomyces clavuligerus ATCC 27064] Length=134 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/137 (45%), Positives = 81/137 (60%), Gaps = 9/137 (6%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAIAGFLVGIALLMAG- 59 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLS---GRMDRGGSAAGASRQRRTKGAG 117 M+ +SV GF+VM G V A+TG R + G G AG Q R Sbjct 60 -----MVSQLVWVSVVGFLVMLGCAVLAVTGWRKAPKPGESQPAGDPAGVRSQPRQSRQR 114 Query 118 GSFTSRMEDRFRRRFDE 134 S R+E R++RR DE Sbjct 115 RSVMDRIEQRWQRRRDE 131 >gi|297194878|ref|ZP_06912276.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720660|gb|EDY64568.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=131 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/139 (44%), Positives = 85/139 (62%), Gaps = 17/139 (12%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGR-----MDRGGSAAGASRQRRTKG 115 ++ I SV GF+VM G V A+TG R + + GG S QRR Sbjct 61 VAQQIWI------SVVGFLVMLGCAVLAVTGWRKAPKPGEQQQTSGGHGRRQSHQRR--- 111 Query 116 AGGSFTSRMEDRFRRRFDE 134 S +R+E+R++RR DE Sbjct 112 ---SVMNRIEERWQRRRDE 127 >gi|297199077|ref|ZP_06916474.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297147280|gb|EFH28560.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=131 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/134 (46%), Positives = 82/134 (62%), Gaps = 7/134 (5%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFAS++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFASALEGSGLRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 K+ LSV GF+VM G V A+TG R + + AAG RR S Sbjct 61 VAKQVW------LSVVGFLVMLGCAVLAVTGWRKAPKPGE-QPAAGVPHGRRQGRQKRSV 113 Query 121 TSRMEDRFRRRFDE 134 R+E R+++R DE Sbjct 114 MDRIEQRWQKRRDE 127 >gi|29832651|ref|NP_827285.1| hypothetical protein SAV_6109 [Streptomyces avermitilis MA-4680] gi|29609771|dbj|BAC73820.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length=130 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 62/134 (47%), Positives = 84/134 (63%), Gaps = 7/134 (5%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 ++ I SV GF+VM G V A+TG R + + SAAGA RR S Sbjct 61 VAQQIWI------SVVGFLVMLGCAVLAVTGWRKAPKPGE-QSAAGAPGARRQPRRRRSM 113 Query 121 TSRMEDRFRRRFDE 134 R+E R++RR DE Sbjct 114 MDRIEQRWQRRRDE 127 >gi|345014470|ref|YP_004816824.1| hypothetical protein Strvi_7178 [Streptomyces violaceusniger Tu 4113] gi|344040819|gb|AEM86544.1| hypothetical protein Strvi_7178 [Streptomyces violaceusniger Tu 4113] Length=130 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/139 (44%), Positives = 84/139 (61%), Gaps = 17/139 (12%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L+ GV Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVAGFLVGIALLMVGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGAS-----RQRRTKG 115 + I SV GF++M G V A+TG R + + GA+ RQRR Sbjct 61 IVPQIWI------SVVGFLIMLGCAVLAVTGWRKAPKPGEAQGDGGAAPRRQGRQRR--- 111 Query 116 AGGSFTSRMEDRFRRRFDE 134 S +R+E+R++RR DE Sbjct 112 ---SMMARIEERWQRRRDE 127 >gi|320011274|gb|ADW06124.1| hypothetical protein Sfla_4723 [Streptomyces flavogriseus ATCC 33331] Length=134 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/137 (46%), Positives = 87/137 (64%), Gaps = 9/137 (6%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRRYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLS---GRMDRGGSAAGASRQRRTKGAG 117 F++T + SV GF+VM G V A+TG R + G GSA+G + R Sbjct 61 VFQQTWV------SVAGFLVMLGCAVLAVTGWRKAPKPGEQQPAGSASGGGGESRHPRQR 114 Query 118 GSFTSRMEDRFRRRFDE 134 S +R+E R++RR DE Sbjct 115 RSMMNRIEQRWQRRRDE 131 >gi|302550809|ref|ZP_07303151.1| transmembrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468427|gb|EFL31520.1| transmembrane protein [Streptomyces viridochromogenes DSM 40736] Length=132 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/134 (45%), Positives = 83/134 (62%), Gaps = 6/134 (4%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 K+ LSV GF+VM G V A+TG R + + + AG + RR S Sbjct 61 VAKQVW------LSVVGFLVMLGCAVLAVTGWRKAPKPGEQATGAGGQQARRQGRQRRSV 114 Query 121 TSRMEDRFRRRFDE 134 R+E R++RR DE Sbjct 115 MDRIEQRWQRRRDE 128 >gi|290961143|ref|YP_003492325.1| hypothetical protein SCAB_67871 [Streptomyces scabiei 87.22] gi|260650669|emb|CBG73785.1| putative membrane protein [Streptomyces scabiei 87.22] Length=133 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/135 (44%), Positives = 85/135 (63%), Gaps = 7/135 (5%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFAS++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFASALEGSGLRTYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRM-DRGGSAAGASRQRRTKGAGGS 119 ++ + SV GF+VM G V A+TG R + + ++ A G++ RR S Sbjct 61 VAQQIWV------SVVGFLVMLGCAVLAVTGWRKAPKPGEQPAGATGSAGGRRQARQRRS 114 Query 120 FTSRMEDRFRRRFDE 134 R+E R++RR DE Sbjct 115 MMDRIEQRWQRRRDE 129 >gi|182439201|ref|YP_001826920.1| hypothetical protein SGR_5408 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779853|ref|ZP_08239118.1| hypothetical protein SACT1_5723 [Streptomyces cf. griseus XylebKG-1] gi|178467717|dbj|BAG22237.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660186|gb|EGE45032.1| hypothetical protein SACT1_5723 [Streptomyces griseus XylebKG-1] Length=134 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/140 (43%), Positives = 87/140 (63%), Gaps = 15/140 (10%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T +R Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRKRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDR------GGSAAGASRQRRTK 114 ++ I SV GF+VM G V A+TG R + + G +GASR+ R + Sbjct 61 VAQQIWI------SVVGFLVMLGCAVLAVTGWRKAPKPGEQQPAVAGSGDSGASRRPRQR 114 Query 115 GAGGSFTSRMEDRFRRRFDE 134 S +R+E R++RR DE Sbjct 115 ---RSMMNRIEQRWQRRRDE 131 >gi|344999128|ref|YP_004801982.1| hypothetical protein SACTE_1526 [Streptomyces sp. SirexAA-E] gi|344314754|gb|AEN09442.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E] Length=131 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/137 (44%), Positives = 84/137 (62%), Gaps = 12/137 (8%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRRYTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLS---GRMDRGGSAAGASRQRRTKGAG 117 ++ I SV GF+VM G V A+TG R + G + + G R R + Sbjct 61 VAQQIWI------SVVGFLVMLGCAVLAVTGWRKAPKPGEQQQPAAGGGEGRHPRQR--- 111 Query 118 GSFTSRMEDRFRRRFDE 134 S +R+E R++RR DE Sbjct 112 RSMMNRIEQRWQRRRDE 128 >gi|257056495|ref|YP_003134327.1| hypothetical protein Svir_25060 [Saccharomonospora viridis DSM 43017] gi|256586367|gb|ACU97500.1| hypothetical protein Svir_25060 [Saccharomonospora viridis DSM 43017] Length=138 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/100 (61%), Positives = 73/100 (73%), Gaps = 2/100 (2%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQR+LDQIE LYAEDPKFAS+VRG R PT RRR+QG ALF++G+ MLV GV Sbjct 1 MPLSEHEQRLLDQIERELYAEDPKFASAVRGTSMRRPTRRRRVQGIALFVVGVAMLVLGV 60 Query 61 AFKETM--IGSFPILSVFGFVVMFGGVVYAITGPRLSGRM 98 A + I P LSV GF+VMFGGV+ A+T SG + Sbjct 61 AGQAPFLRIAEIPWLSVLGFLVMFGGVLLAVTALGASGEV 100 >gi|337765227|emb|CCB73936.1| putative membrane protein [Streptomyces cattleya NRRL 8057] Length=133 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 60/139 (44%), Positives = 82/139 (59%), Gaps = 15/139 (10%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFAS++ G G R T RR Q A F++G+ +L++G+ Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFASALEGSGLRTFTRRRVYQAVAGFLVGIALLMAGM 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMD-----RGGSAAGASRQRRTKG 115 ++ I SV GF+VM G A+T R S + + R G G RR Sbjct 61 VAQQIWI------SVVGFLVMLGCAALAVTAWRRSAKPEQSAPGRVGHHPGRPHPRRK-- 112 Query 116 AGGSFTSRMEDRFRRRFDE 134 G R+E+R++RR DE Sbjct 113 --GRVMDRIEERWQRRRDE 129 >gi|340529700|gb|AEK44905.1| transmembrane protein [Amycolatopsis mediterranei S699] Length=133 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 73/134 (55%), Positives = 92/134 (69%), Gaps = 2/134 (1%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQR+LDQIE LYAEDPKFAS+VRG R P RRR+QG ALF++G+ +LV GV Sbjct 1 MPLSEHEQRLLDQIERELYAEDPKFASTVRGTRLRRPARRRRIQGIALFVVGVALLVLGV 60 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGSF 120 + + P++SV GF+VMF GV+ A+T R D G A G SR + G SF Sbjct 61 VVPQFRVADIPLISVLGFLVMFFGVMMAVTSIR--HGADGDGKAGGPSRGGKPSGGRSSF 118 Query 121 TSRMEDRFRRRFDE 134 T RME+RFR+RF+E Sbjct 119 TQRMEERFRQRFEE 132 >gi|262202919|ref|YP_003274127.1| hypothetical protein Gbro_3027 [Gordonia bronchialis DSM 43247] gi|262086266|gb|ACY22234.1| hypothetical protein Gbro_3027 [Gordonia bronchialis DSM 43247] Length=132 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/141 (47%), Positives = 87/141 (62%), Gaps = 17/141 (12%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+QIE+ALYAEDPKFASSV+ + RRRLQ A+F++ +L+ G Sbjct 1 MPLSEHEQRMLEQIENALYAEDPKFASSVKRRRLGRASGRRRLQAVAVFVL-GLVLLVGG 59 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGRMDRGGSAAGASRQRRTKGAGGS- 119 IG FPI+S+ GF+VMFG ++A+ G GGS AG RR+ G+ Sbjct 60 LIVGVRIGGFPIVSLIGFLVMFGAGLFALWG---------GGSPAGGDHGRRSGKKSGTA 110 Query 120 ------FTSRMEDRFRRRFDE 134 + RME+RF RRF++ Sbjct 111 SGPKRKLSERMEERFNRRFEQ 131 >gi|302561112|ref|ZP_07313454.1| membrane protein [Streptomyces griseoflavus Tu4000] gi|302478730|gb|EFL41823.1| membrane protein [Streptomyces griseoflavus Tu4000] Length=133 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/141 (44%), Positives = 82/141 (59%), Gaps = 19/141 (13%) Query 1 MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGAALFIIGLGMLVSGV 60 MPLS+HEQRML+Q+E ALYAEDPKFA+++ G G R T RR Q A F++G+ +L++G Sbjct 1 MPLSEHEQRMLEQMERALYAEDPKFATALEGSGLRTYTRRRVYQAVAGFLVGIALLMAG- 59 Query 61 AFKETMIGSFPILSVFGFVVMFGGVVYAITGPRLSGR-------MDRGGSAAGASRQRRT 113 M+ LSV GF+VM G V A+TG R + + A +RQRR Sbjct 60 -----MVAQQVWLSVVGFLVMLGCAVLAVTGWRKAPKPGEQAAGAQGAPQAGRQTRQRR- 113 Query 114 KGAGGSFTSRMEDRFRRRFDE 134 S R+E R++RR DE Sbjct 114 -----SVMDRIEQRWQRRRDE 129 Lambda K H 0.325 0.140 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129924441710 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40