BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2171
Length=227
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841661|ref|NP_336698.1| hypothetical protein MT2227 [Mycoba... 452 2e-125
gi|15609308|ref|NP_216687.1| lipoprotein lppM [Mycobacterium tub... 450 6e-125
gi|289443676|ref|ZP_06433420.1| lipoprotein lppM [Mycobacterium ... 449 2e-124
gi|323719266|gb|EGB28410.1| lipoprotein lppM [Mycobacterium tube... 436 1e-120
gi|240168230|ref|ZP_04746889.1| lipoprotein LppM [Mycobacterium ... 394 6e-108
gi|118463241|ref|YP_881527.1| LppM protein [Mycobacterium avium ... 380 5e-104
gi|41408007|ref|NP_960843.1| LppM [Mycobacterium avium subsp. pa... 371 5e-101
gi|254819740|ref|ZP_05224741.1| LppM [Mycobacterium intracellula... 366 2e-99
gi|342859881|ref|ZP_08716534.1| LppM [Mycobacterium colombiense ... 364 5e-99
gi|118618808|ref|YP_907140.1| lipoprotein LppM [Mycobacterium ul... 351 5e-95
gi|183983196|ref|YP_001851487.1| lipoprotein LppM [Mycobacterium... 339 1e-91
gi|15827422|ref|NP_301685.1| lipoprotein [Mycobacterium leprae T... 337 7e-91
gi|296166036|ref|ZP_06848485.1| LppM protein [Mycobacterium para... 337 9e-91
gi|333990371|ref|YP_004522985.1| hypothetical protein JDM601_173... 302 3e-80
gi|315443910|ref|YP_004076789.1| hypothetical protein Mspyr1_230... 291 5e-77
gi|120404507|ref|YP_954336.1| LppM [Mycobacterium vanbaalenii PY... 286 1e-75
gi|145223563|ref|YP_001134241.1| LppM [Mycobacterium gilvum PYR-... 285 3e-75
gi|108800234|ref|YP_640431.1| protein LppM [Mycobacterium sp. MC... 281 4e-74
gi|118471170|ref|YP_888516.1| LppM protein [Mycobacterium smegma... 259 2e-67
gi|169629081|ref|YP_001702730.1| lipoprotein LppM [Mycobacterium... 244 8e-63
gi|226360245|ref|YP_002778023.1| hypothetical protein ROP_08310 ... 198 5e-49
gi|229490466|ref|ZP_04384307.1| LppM protein [Rhodococcus erythr... 188 4e-46
gi|226307055|ref|YP_002767015.1| hypothetical protein RER_35680 ... 188 5e-46
gi|111018116|ref|YP_701088.1| lipoprotein [Rhodococcus jostii RH... 184 6e-45
gi|325676961|ref|ZP_08156633.1| LppM protein [Rhodococcus equi A... 168 5e-40
gi|312140157|ref|YP_004007493.1| membrane protein [Rhodococcus e... 167 1e-39
gi|54023719|ref|YP_117961.1| putative lipoprotein [Nocardia farc... 163 2e-38
gi|333918981|ref|YP_004492562.1| putative lipoprotein [Amycolici... 154 1e-35
gi|256375541|ref|YP_003099201.1| hypothetical protein Amir_1403 ... 131 8e-29
gi|331696600|ref|YP_004332839.1| hypothetical protein Psed_2786 ... 126 2e-27
gi|325000134|ref|ZP_08121246.1| putative lipoprotein [Pseudonoca... 121 6e-26
gi|296140356|ref|YP_003647599.1| lipoprotein [Tsukamurella pauro... 117 1e-24
gi|291004279|ref|ZP_06562252.1| lipoprotein [Saccharopolyspora e... 111 6e-23
gi|134098301|ref|YP_001103962.1| lipoprotein [Saccharopolyspora ... 110 1e-22
gi|343924196|ref|ZP_08763759.1| hypothetical protein GOALK_002_0... 100 1e-19
gi|262202923|ref|YP_003274131.1| hypothetical protein Gbro_3031 ... 96.3 3e-18
gi|319949928|ref|ZP_08023927.1| hypothetical protein ES5_10512 [... 94.0 1e-17
gi|326382547|ref|ZP_08204238.1| hypothetical protein SCNU_06395 ... 84.0 2e-14
gi|213965228|ref|ZP_03393425.1| putative lipoprotein [Corynebact... 62.0 6e-08
gi|291299736|ref|YP_003511014.1| hypothetical protein Snas_2231 ... 60.8 2e-07
gi|256833640|ref|YP_003162367.1| hypothetical protein Jden_2432 ... 55.5 6e-06
gi|336319324|ref|YP_004599292.1| hypothetical protein Celgi_0196... 50.1 3e-04
gi|334335841|ref|YP_004540993.1| hypothetical protein Isova_0297... 48.9 5e-04
gi|229822133|ref|YP_002883659.1| hypothetical protein Bcav_3655 ... 47.0 0.002
gi|269796806|ref|YP_003316261.1| hypothetical protein Sked_35390... 44.7 0.009
gi|284030932|ref|YP_003380863.1| hypothetical protein Kfla_2999 ... 40.8 0.14
gi|170078895|ref|YP_001735533.1| penicillin-binding protein [Syn... 39.3 0.47
gi|326772431|ref|ZP_08231715.1| translation initiation factor IF... 37.7 1.1
gi|51891891|ref|YP_074582.1| hypothetical protein STH753 [Symbio... 37.0 2.0
gi|239989747|ref|ZP_04710411.1| putative two-component system se... 36.6 3.2
>gi|15841661|ref|NP_336698.1| hypothetical protein MT2227 [Mycobacterium tuberculosis CDC1551]
gi|254232325|ref|ZP_04925652.1| lipoprotein lppM [Mycobacterium tuberculosis C]
gi|308232055|ref|ZP_07414758.2| lipoprotein lppM [Mycobacterium tuberculosis SUMu001]
23 more sequence titles
Length=241
Score = 452 bits (1163), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 1 VARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
VARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL
Sbjct 15 VARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 74
Query 61 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 120
DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI
Sbjct 75 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 134
Query 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 180
LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD
Sbjct 135 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 194
Query 181 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS
Sbjct 195 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 241
>gi|15609308|ref|NP_216687.1| lipoprotein lppM [Mycobacterium tuberculosis H37Rv]
gi|31793349|ref|NP_855842.1| lipoprotein lppM [Mycobacterium bovis AF2122/97]
gi|121638051|ref|YP_978275.1| putative lipoprotein lppM [Mycobacterium bovis BCG str. Pasteur
1173P2]
45 more sequence titles
Length=227
Score = 450 bits (1158), Expect = 6e-125, Method: Compositional matrix adjust.
Identities = 226/227 (99%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 1 VARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
+ARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL
Sbjct 1 MARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
Query 61 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 120
DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI
Sbjct 61 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 120
Query 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 180
LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD
Sbjct 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 180
Query 181 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS
Sbjct 181 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
>gi|289443676|ref|ZP_06433420.1| lipoprotein lppM [Mycobacterium tuberculosis T46]
gi|289570285|ref|ZP_06450512.1| lipoprotein lppM [Mycobacterium tuberculosis T17]
gi|289750765|ref|ZP_06510143.1| lipoprotein lppM [Mycobacterium tuberculosis T92]
gi|289416595|gb|EFD13835.1| lipoprotein lppM [Mycobacterium tuberculosis T46]
gi|289544039|gb|EFD47687.1| lipoprotein lppM [Mycobacterium tuberculosis T17]
gi|289691352|gb|EFD58781.1| lipoprotein lppM [Mycobacterium tuberculosis T92]
Length=227
Score = 449 bits (1154), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 225/227 (99%), Positives = 226/227 (99%), Gaps = 0/227 (0%)
Query 1 VARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
+ARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL
Sbjct 1 MARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
Query 61 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 120
DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI
Sbjct 61 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 120
Query 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 180
LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD
Sbjct 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 180
Query 181 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
PNTRSFTGAGIWLGIAAFAAAGVVAVLAW DRDRSPRLTASGDPPTS
Sbjct 181 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWTDRDRSPRLTASGDPPTS 227
>gi|323719266|gb|EGB28410.1| lipoprotein lppM [Mycobacterium tuberculosis CDC1551A]
gi|339295086|gb|AEJ47197.1| lipoprotein lppM [Mycobacterium tuberculosis CCDC5079]
gi|339298707|gb|AEJ50817.1| lipoprotein lppM [Mycobacterium tuberculosis CCDC5180]
Length=219
Score = 436 bits (1121), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)
Query 9 MLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQ 68
MLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQ
Sbjct 1 MLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQ 60
Query 69 KVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLT 128
KVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLT
Sbjct 61 KVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLT 120
Query 129 SVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTG 188
SVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTG
Sbjct 121 SVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTG 180
Query 189 AGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
AGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS
Sbjct 181 AGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 219
>gi|240168230|ref|ZP_04746889.1| lipoprotein LppM [Mycobacterium kansasii ATCC 12478]
Length=228
Score = 394 bits (1012), Expect = 6e-108, Method: Compositional matrix adjust.
Identities = 197/223 (89%), Positives = 207/223 (93%), Gaps = 1/223 (0%)
Query 4 TRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD-G 62
TRRR MLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKN+KD GP LD
Sbjct 4 TRRRRMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNNKDAGPQLDSN 63
Query 63 DVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILE 122
++ FSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGN+VILE
Sbjct 64 NLAFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNLVILE 123
Query 123 GRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPN 182
GR DLTS++D DADVELTVAFP VTSTNGDRIEPEVVQWKLKPGVVSTM+AQARYTDPN
Sbjct 124 GRVDLTSLTDADADVELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPN 183
Query 183 TRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPP 225
TRSFT AGIWLGI + AAGVVA+LAWI RDRSPRLTA+GD P
Sbjct 184 TRSFTAAGIWLGIGSLLAAGVVALLAWISRDRSPRLTAAGDQP 226
>gi|118463241|ref|YP_881527.1| LppM protein [Mycobacterium avium 104]
gi|254774995|ref|ZP_05216511.1| LppM protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|118164528|gb|ABK65425.1| LppM protein [Mycobacterium avium 104]
gi|336461955|gb|EGO40807.1| Protein of unknown function (DUF3153) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=226
Score = 380 bits (977), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 187/222 (85%), Positives = 206/222 (93%), Gaps = 1/222 (0%)
Query 5 RRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD-GD 63
RRR +LA AMLL++VPLATGCLRVRAS+TISPDDLVSGEI+AAAKPK KDTGP LD +
Sbjct 2 RRRRLLAFAMLLLVVPLATGCLRVRASLTISPDDLVSGEIVAAAKPKTPKDTGPQLDSNN 61
Query 64 VPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEG 123
+PFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGN+V+LEG
Sbjct 62 LPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNLVLLEG 121
Query 124 RADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT 183
RADLTS++DP+ADVELTVAFP VTSTNGDR+EP+VV WKLKPGVVSTM+AQARYTDPNT
Sbjct 122 RADLTSLTDPEADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNT 181
Query 184 RSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPP 225
RSFTGA +WLGIA+FAAAGVV +LAW+ RDRSPRLTA D P
Sbjct 182 RSFTGAVVWLGIASFAAAGVVGLLAWVSRDRSPRLTAPRDQP 223
>gi|41408007|ref|NP_960843.1| LppM [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396362|gb|AAS04226.1| LppM [Mycobacterium avium subsp. paratuberculosis K-10]
Length=243
Score = 371 bits (952), Expect = 5e-101, Method: Compositional matrix adjust.
Identities = 182/215 (85%), Positives = 200/215 (94%), Gaps = 1/215 (0%)
Query 12 IAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD-GDVPFSQKV 70
AMLL++VPLATGCLRVRAS+TISPDDLVSGEI+AAAKPK KDTGP LD ++PFSQKV
Sbjct 26 FAMLLLVVPLATGCLRVRASLTISPDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFSQKV 85
Query 71 AVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSV 130
AVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGN+V+LEGRADLTS+
Sbjct 86 AVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNLVLLEGRADLTSL 145
Query 131 SDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAG 190
+DP+ADVELTVAFP VTSTNGDR+EP+VV WKLKPGVVSTM+AQARYTDPNTRSFTGA
Sbjct 146 TDPEADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNTRSFTGAV 205
Query 191 IWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPP 225
+WLGIA+FAAAGVV +LAW+ RDRSPRLTA D P
Sbjct 206 VWLGIASFAAAGVVGLLAWVSRDRSPRLTAPRDQP 240
>gi|254819740|ref|ZP_05224741.1| LppM [Mycobacterium intracellulare ATCC 13950]
Length=216
Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/216 (85%), Positives = 200/216 (93%), Gaps = 3/216 (1%)
Query 14 MLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD-GDVPFSQKVAV 72
MLL+LVPLATGCLRVRAS+T+SPDDLVSGEI+AAAKPK KDTGP LD ++PFSQKVAV
Sbjct 1 MLLLLVPLATGCLRVRASLTVSPDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFSQKVAV 60
Query 73 SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD 132
SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDA+GVNLSLRRNGN+VILEGRADLTS++D
Sbjct 61 SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDASGVNLSLRRNGNLVILEGRADLTSLTD 120
Query 133 PDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIW 192
+ADVELTVAFP VTSTNGDR+EP+VV WKLKPGVVSTM+AQARYTDPNTRSFTGA +W
Sbjct 121 SEADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNTRSFTGAVVW 180
Query 193 LGIAAFAAAGVVAVLAWIDRDRSPRLTASGD--PPT 226
LGIA+FAAAGVV +LAW+ RDRSPRLTA D PPT
Sbjct 181 LGIASFAAAGVVGLLAWVGRDRSPRLTAPRDQPPPT 216
>gi|342859881|ref|ZP_08716534.1| LppM [Mycobacterium colombiense CECT 3035]
gi|342133013|gb|EGT86233.1| LppM [Mycobacterium colombiense CECT 3035]
Length=216
Score = 364 bits (934), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 179/213 (85%), Positives = 198/213 (93%), Gaps = 1/213 (0%)
Query 14 MLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD-GDVPFSQKVAV 72
MLL++VPLATGCLRVRAS+TISPDDLVSGEI+AAAKPK SKDTGP LD ++PFSQKVAV
Sbjct 1 MLLLVVPLATGCLRVRASLTISPDDLVSGEIVAAAKPKTSKDTGPQLDSNNLPFSQKVAV 60
Query 73 SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD 132
SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDA+GVNL+LRRNGN+VILEGRADLTS++D
Sbjct 61 SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDASGVNLTLRRNGNLVILEGRADLTSLTD 120
Query 133 PDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIW 192
P+ADVELTVAFP VTSTNGDR EP+VV WKLKPGVV+TM+AQARYTDPNTRSFTGA +W
Sbjct 121 PEADVELTVAFPGVVTSTNGDRAEPDVVTWKLKPGVVTTMTAQARYTDPNTRSFTGAVVW 180
Query 193 LGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPP 225
L IA+FAAAGVV +LAW+ RDRSPRLTA D P
Sbjct 181 LCIASFAAAGVVGLLAWVSRDRSPRLTAPRDQP 213
>gi|118618808|ref|YP_907140.1| lipoprotein LppM [Mycobacterium ulcerans Agy99]
gi|118570918|gb|ABL05669.1| conserved lipoprotein LppM [Mycobacterium ulcerans Agy99]
Length=215
Score = 351 bits (900), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/215 (88%), Positives = 196/215 (92%), Gaps = 1/215 (0%)
Query 14 MLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGD-VPFSQKVAV 72
MLLMLVPLATGCLRVRASITISP+DLVSGEIIAAAKPKN+KDTGP LD D V FSQKVAV
Sbjct 1 MLLMLVPLATGCLRVRASITISPEDLVSGEIIAAAKPKNNKDTGPQLDSDNVAFSQKVAV 60
Query 73 SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD 132
SNYD DGYVGSQAVFSDLTFAELPQLANMN DAAGVNLSLRRNGN+VILEGR DLTSV+D
Sbjct 61 SNYDGDGYVGSQAVFSDLTFAELPQLANMNPDAAGVNLSLRRNGNMVILEGRVDLTSVTD 120
Query 133 PDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIW 192
DA+VELTVAFP VTSTNGDRIEPEVVQWKLKPGVVSTM+AQARYTDPNTRSFT AGIW
Sbjct 121 ADAEVELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPNTRSFTAAGIW 180
Query 193 LGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
L IA+FAAAG VA LAW+ RDRSPR TA GD P S
Sbjct 181 LAIASFAAAGAVAALAWVSRDRSPRFTAPGDQPPS 215
>gi|183983196|ref|YP_001851487.1| lipoprotein LppM [Mycobacterium marinum M]
gi|183176522|gb|ACC41632.1| conserved lipoprotein LppM [Mycobacterium marinum M]
Length=242
Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/210 (89%), Positives = 193/210 (92%), Gaps = 1/210 (0%)
Query 19 VPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGD-VPFSQKVAVSNYDS 77
VPLATGCLRVRASITISP+DLVSGEIIAAAKPKN+KDTGP LD D V FSQKVAVSNYDS
Sbjct 33 VPLATGCLRVRASITISPEDLVSGEIIAAAKPKNNKDTGPQLDSDNVAFSQKVAVSNYDS 92
Query 78 DGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPDADV 137
DGYVGSQAVFSDLTFAELPQLANMN DAAGVNLSLRRNGN+VILEGR DLTSV+D DA+V
Sbjct 93 DGYVGSQAVFSDLTFAELPQLANMNPDAAGVNLSLRRNGNMVILEGRVDLTSVTDADAEV 152
Query 138 ELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAA 197
ELTVAFP VTSTNGDRIEPEVVQWKLKPGVVSTM+AQARYTDPNTRSFT AGIWL IA+
Sbjct 153 ELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPNTRSFTAAGIWLAIAS 212
Query 198 FAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
FAAAGVVA LAW+ RDRSPR TA GD P S
Sbjct 213 FAAAGVVAALAWVSRDRSPRFTAPGDQPPS 242
>gi|15827422|ref|NP_301685.1| lipoprotein [Mycobacterium leprae TN]
gi|221229899|ref|YP_002503315.1| putative lipoprotein [Mycobacterium leprae Br4923]
gi|3080485|emb|CAA18680.1| putative lipoprotein [Mycobacterium leprae]
gi|13092972|emb|CAC31283.1| probable lipoprotein [Mycobacterium leprae]
gi|219933006|emb|CAR70997.1| probable lipoprotein [Mycobacterium leprae Br4923]
Length=239
Score = 337 bits (864), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/224 (76%), Positives = 191/224 (86%), Gaps = 1/224 (0%)
Query 5 RRRGMLAIAMLLM-LVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGD 63
+RR L IA+LL+ +VPLATGCLRV ASITISPD+LVSG+IIAAAKPKN D GP L+ +
Sbjct 16 QRRRTLTIALLLVAMVPLATGCLRVTASITISPDNLVSGKIIAAAKPKNKNDAGPQLNDN 75
Query 64 VPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEG 123
+PFSQK+AVSNY+SDGYVGSQAVFSDLTFAELPQLANMNS V LSLRRNGN+VILE
Sbjct 76 LPFSQKIAVSNYNSDGYVGSQAVFSDLTFAELPQLANMNSSTTDVTLSLRRNGNLVILES 135
Query 124 RADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT 183
RADLTSV+DPDADVELTVAFP VTSTNGDRIE +VV WKLKPGVVSTMSA+ARYTDP+T
Sbjct 136 RADLTSVTDPDADVELTVAFPGVVTSTNGDRIETKVVAWKLKPGVVSTMSARARYTDPDT 195
Query 184 RSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS 227
RSFTGA +WLGIA+F+AA VV +LAW +R S RL D +S
Sbjct 196 RSFTGAAVWLGIASFSAASVVVLLAWNERKSSARLQIPRDSSSS 239
>gi|296166036|ref|ZP_06848485.1| LppM protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898601|gb|EFG78158.1| LppM protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=221
Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 182/218 (84%), Positives = 202/218 (93%), Gaps = 1/218 (0%)
Query 9 MLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD-GDVPFS 67
M+AIA+LLMLVPL +GCLRVRAS+TISPDDLVSGEI+AAAKPK KDTGP LD ++PFS
Sbjct 1 MVAIALLLMLVPLLSGCLRVRASLTISPDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFS 60
Query 68 QKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADL 127
QKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDA GVNL+LRRNGN+V+LEGRADL
Sbjct 61 QKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAQGVNLTLRRNGNLVMLEGRADL 120
Query 128 TSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFT 187
TS++D +ADVELTVAFP VTSTNGDR+E VV WKLKPGVVSTM+AQARYTDPNTRSFT
Sbjct 121 TSLTDSEADVELTVAFPGVVTSTNGDRVESTVVSWKLKPGVVSTMTAQARYTDPNTRSFT 180
Query 188 GAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPP 225
GAG+WLGIA+FAAAGVVA+LAW++RDRSPR TA GD P
Sbjct 181 GAGVWLGIASFAAAGVVALLAWMNRDRSPRFTAPGDQP 218
>gi|333990371|ref|YP_004522985.1| hypothetical protein JDM601_1731 [Mycobacterium sp. JDM601]
gi|333486339|gb|AEF35731.1| lipoprotein LppM [Mycobacterium sp. JDM601]
Length=237
Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/218 (67%), Positives = 180/218 (83%), Gaps = 0/218 (0%)
Query 6 RRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVP 65
RR + + ++L+ P+ GC+RV+A+IT+SP+D VSG+IIAAAKP+N DTGP L DVP
Sbjct 17 RRLLALVVLVLITAPMMVGCVRVKATITVSPNDQVSGQIIAAAKPRNDNDTGPKLSADVP 76
Query 66 FSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRA 125
F+QK+A+++Y+ DGYVGSQAVFSDLTFAELPQLA MN DAAGVNL+LRR GN+VILEGR
Sbjct 77 FAQKIAITSYNRDGYVGSQAVFSDLTFAELPQLAEMNRDAAGVNLALRRAGNLVILEGRV 136
Query 126 DLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS 185
DLTS+SDP ADVEL+VAFP VTSTNG+R+ + VQW+LKPGVVSTMSAQA YTDP+TRS
Sbjct 137 DLTSLSDPTADVELSVAFPGEVTSTNGERLGDDTVQWRLKPGVVSTMSAQAHYTDPSTRS 196
Query 186 FTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGD 223
F A +WL ++ FA AG VA++AW RDRSPR ++ D
Sbjct 197 FVRAAMWLVLSTFAVAGAVALIAWGGRDRSPRFSSPHD 234
>gi|315443910|ref|YP_004076789.1| hypothetical protein Mspyr1_23090 [Mycobacterium sp. Spyr1]
gi|315262213|gb|ADT98954.1| hypothetical protein Mspyr1_23090 [Mycobacterium sp. Spyr1]
Length=216
Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/206 (69%), Positives = 172/206 (84%), Gaps = 0/206 (0%)
Query 12 IAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVA 71
+ +LL++ P GC+RVRASIT+SPDD VSG+I+AAA P++ D GP L ++PF+QKVA
Sbjct 2 VLLLLVVAPSLIGCVRVRASITVSPDDRVSGQIVAAAIPRDDNDKGPQLLNNLPFAQKVA 61
Query 72 VSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVS 131
VS+Y D YVGSQA FSDLTFAELPQLA MN DAAGV++SLRR G++VILEGR DLTS+S
Sbjct 62 VSDYSRDDYVGSQATFSDLTFAELPQLAAMNRDAAGVDISLRRAGDLVILEGRVDLTSLS 121
Query 132 DPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGI 191
DP+ADV L+VAFP VTSTNGD+I VV+WKL+PGVVSTM+AQARYTDP+ RSF GA I
Sbjct 122 DPEADVSLSVAFPGEVTSTNGDQISSSVVEWKLRPGVVSTMNAQARYTDPSARSFAGAAI 181
Query 192 WLGIAAFAAAGVVAVLAWIDRDRSPR 217
WLG+A+F AG+VA LA+ +RDRSPR
Sbjct 182 WLGVASFLVAGIVAWLAYSNRDRSPR 207
>gi|120404507|ref|YP_954336.1| LppM [Mycobacterium vanbaalenii PYR-1]
gi|119957325|gb|ABM14330.1| LppM [Mycobacterium vanbaalenii PYR-1]
Length=229
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/205 (68%), Positives = 171/205 (84%), Gaps = 0/205 (0%)
Query 20 PLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDG 79
P GC+R+RASIT+SPDD VSG+I+AAA P++ D GP L ++PF+QKVAVS+Y D
Sbjct 23 PSLIGCVRIRASITVSPDDRVSGQIVAAAIPRDDNDKGPQLLNNLPFAQKVAVSDYSRDD 82
Query 80 YVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPDADVEL 139
YVGSQAVFSDLTFAELPQLA+MN DAAGV++SLRR G++VILEGRADLTS+SDP+ADV L
Sbjct 83 YVGSQAVFSDLTFAELPQLASMNRDAAGVDISLRRAGDLVILEGRADLTSLSDPEADVSL 142
Query 140 TVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFA 199
+VAFP VTSTNG++I VV+WKL+PGVVSTM+AQARYTDP+ RSFTGA IWLG+A+
Sbjct 143 SVAFPGEVTSTNGEQISSSVVEWKLRPGVVSTMNAQARYTDPSARSFTGAAIWLGMASLV 202
Query 200 AAGVVAVLAWIDRDRSPRLTASGDP 224
AG++ LA+ +RDRSPR + +P
Sbjct 203 VAGIIGWLAYSNRDRSPRPGETQEP 227
>gi|145223563|ref|YP_001134241.1| LppM [Mycobacterium gilvum PYR-GCK]
gi|145216049|gb|ABP45453.1| LppM [Mycobacterium gilvum PYR-GCK]
Length=229
Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/198 (71%), Positives = 166/198 (84%), Gaps = 0/198 (0%)
Query 20 PLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDG 79
P GC+RVRASIT+SPDD VSG+I+AAA P++ D GP L ++PF+QKVAVS+Y D
Sbjct 23 PSLIGCVRVRASITVSPDDRVSGQIVAAAIPRDDNDKGPQLLNNLPFAQKVAVSDYSRDD 82
Query 80 YVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPDADVEL 139
YVGSQA FSDLTFAELPQLA MN DAAGV++SLRR G++VILEGR DLTS+SDP+ADV L
Sbjct 83 YVGSQATFSDLTFAELPQLAAMNRDAAGVDISLRRAGDLVILEGRVDLTSLSDPEADVSL 142
Query 140 TVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFA 199
+VAFP VTSTNGD+I VV+WKL+PGVVSTM+AQARYTDP+ RSF GA IWLG+A+F
Sbjct 143 SVAFPGEVTSTNGDQISSSVVEWKLRPGVVSTMNAQARYTDPSARSFAGAAIWLGVASFL 202
Query 200 AAGVVAVLAWIDRDRSPR 217
AG+VA LA+ +RDRSPR
Sbjct 203 VAGIVAWLAYSNRDRSPR 220
>gi|108800234|ref|YP_640431.1| protein LppM [Mycobacterium sp. MCS]
gi|119869362|ref|YP_939314.1| protein LppM [Mycobacterium sp. KMS]
gi|126435857|ref|YP_001071548.1| protein LppM [Mycobacterium sp. JLS]
gi|108770653|gb|ABG09375.1| LppM [Mycobacterium sp. MCS]
gi|119695451|gb|ABL92524.1| LppM [Mycobacterium sp. KMS]
gi|126235657|gb|ABN99057.1| LppM [Mycobacterium sp. JLS]
Length=234
Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 142/218 (66%), Positives = 177/218 (82%), Gaps = 0/218 (0%)
Query 1 VARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
+AR +R ++A +LL+++P+ GC+RVRASIT+SPDD VSG+I+AAAKP+ D GP L
Sbjct 5 LARRQRTRLVAWVLLLLMLPMVVGCVRVRASITVSPDDRVSGQIVAAAKPRGPDDKGPQL 64
Query 61 DGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI 120
++PF+ KVAVS+Y+ D YVG+QAVFSDLTFAELPQLANMN DAAGV++SLRR G++VI
Sbjct 65 LNNLPFATKVAVSDYNRDDYVGTQAVFSDLTFAELPQLANMNRDAAGVDISLRRAGDLVI 124
Query 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTD 180
LEGR DLTSVSDP+ADV L+VAFP VTSTNGD++ EVV+WKL PGVVST++AQARYTD
Sbjct 125 LEGRVDLTSVSDPEADVSLSVAFPGEVTSTNGDQVSTEVVEWKLNPGVVSTLNAQARYTD 184
Query 181 PNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRL 218
P+ RSFT A IWL +A A ++ LAW RDRSP L
Sbjct 185 PSARSFTTAAIWLTVATLVVAAIIGGLAWSSRDRSPTL 222
>gi|118471170|ref|YP_888516.1| LppM protein [Mycobacterium smegmatis str. MC2 155]
gi|118172457|gb|ABK73353.1| LppM protein [Mycobacterium smegmatis str. MC2 155]
Length=231
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/198 (68%), Positives = 165/198 (84%), Gaps = 0/198 (0%)
Query 20 PLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDG 79
P A GC+R+RASIT+SPDD VSG+IIAAAKP ++ D GP L ++PF+ KVAVS Y D
Sbjct 25 PTAVGCVRIRASITVSPDDRVSGQIIAAAKPSDADDKGPQLVNNLPFAHKVAVSEYSRDD 84
Query 80 YVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPDADVEL 139
YVGSQAVFSDL+FAE+PQLA ++ DAAGV++SLRR G++VILEGR DLTS++DP+ADV L
Sbjct 85 YVGSQAVFSDLSFAEVPQLAALSRDAAGVDISLRRAGDLVILEGRVDLTSMNDPEADVLL 144
Query 140 TVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFA 199
TV+FP VTSTNGD++ +V+WKL+PGVVSTM+AQARYTDP+ RSFT A IWL IAAF
Sbjct 145 TVSFPGDVTSTNGDQVTSSIVEWKLRPGVVSTMNAQARYTDPSARSFTTAAIWLVIAAFV 204
Query 200 AAGVVAVLAWIDRDRSPR 217
A VVA LA++ RD+SP+
Sbjct 205 VASVVAGLAYVSRDQSPK 222
>gi|169629081|ref|YP_001702730.1| lipoprotein LppM [Mycobacterium abscessus ATCC 19977]
gi|169241048|emb|CAM62076.1| Probable conserved lipoprotein LppM [Mycobacterium abscessus]
Length=226
Score = 244 bits (622), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 113/198 (58%), Positives = 156/198 (79%), Gaps = 1/198 (0%)
Query 23 TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVG 82
+GC+RV+AS+T++ DD VSG++IA AKP+ D GP LD ++ F++KV VS Y+ +G VG
Sbjct 23 SGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGMVG 82
Query 83 SQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD-PDADVELTV 141
S+A+F+DLTF+E+PQLA MN +AAG +L+LRRNG++V+LEGRADLT++ D +ADV L V
Sbjct 83 SRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAV 142
Query 142 AFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAA 201
+FP + STNG+ + + VQWKL PGVVS+ +A ARYTDP+TRSF GA I++ IAA
Sbjct 143 SFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVG 202
Query 202 GVVAVLAWIDRDRSPRLT 219
+VA +AW+DRD+SPR T
Sbjct 203 ALVASMAWLDRDQSPRFT 220
>gi|226360245|ref|YP_002778023.1| hypothetical protein ROP_08310 [Rhodococcus opacus B4]
gi|226238730|dbj|BAH49078.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=237
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/220 (50%), Positives = 140/220 (64%), Gaps = 8/220 (3%)
Query 3 RTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDG 62
R+RR LA+ + L+LVP GCLRV+ S+ +S DD VSG+I+AAA P N +D GP L
Sbjct 11 RSRRAASLAV-LGLLLVPFLAGCLRVQVSMGVSADDRVSGQIVAAAVPANDQDKGPQLTP 69
Query 63 DVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVIL 121
S KV + Y DGYVGSQA FSDLTF ++ QL M+ A G +SL+R G++V L
Sbjct 70 PGSLSDKVRIQEYKKDGYVGSQAFFSDLTFGDVQQLGTMSEQATGSFQISLQRTGDLVTL 129
Query 122 EGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDP 181
+G+ADL+SV DV+ T+AFPA V +TNG R +V WKL G ST+ A+ RY+DP
Sbjct 130 DGKADLSSVPAQGTDVQFTIAFPARVATTNGTREGDSIVSWKLPAGDTSTIRAEVRYSDP 189
Query 182 NTRSFTGAGIWLGIAAFAAAGV---VAVLAWIDRDRSPRL 218
+TRSF G W GI A GV V LAW+ R++ P L
Sbjct 190 STRSFAG---WAGIMAGVTLGVAVIVGALAWMARNKEPVL 226
>gi|229490466|ref|ZP_04384307.1| LppM protein [Rhodococcus erythropolis SK121]
gi|229322756|gb|EEN88536.1| LppM protein [Rhodococcus erythropolis SK121]
Length=261
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/215 (47%), Positives = 140/215 (66%), Gaps = 3/215 (1%)
Query 4 TRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGD 63
+R+R + A+ LMLVPL GC+RV+ S+ +S +D V+G+++AAA P N D GP L
Sbjct 13 SRKRFLTVAALALMLVPLLAGCIRVQVSMGVSANDRVTGQVVAAAIPANEADKGPQLTPP 72
Query 64 VPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVILE 122
K+ V Y DGYVGSQA FSDL+F ++ QL +M ++ +G ++L+R+G+ V L+
Sbjct 73 SSLEDKIRVQEYKKDGYVGSQAFFSDLSFGDVAQLGSMYAEGSGSFQITLKRSGDTVTLD 132
Query 123 GRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPN 182
G+ADL +V ADV++++AFPA V +TNG R V W L G VSTM A+ Y DP+
Sbjct 133 GKADLKTVPTQGADVQVSIAFPARVGTTNGTRDGDSRVSWTLPAGEVSTMRAEVNYADPS 192
Query 183 TRSFTG-AGIWLGIAAFAAAGVVAVLAWIDRDRSP 216
TRSF G AGI G+ A A VV +AW+ R+R+P
Sbjct 193 TRSFAGWAGIMAGL-ALGVAIVVGAMAWMARNRAP 226
>gi|226307055|ref|YP_002767015.1| hypothetical protein RER_35680 [Rhodococcus erythropolis PR4]
gi|226186172|dbj|BAH34276.1| hypothetical protein RER_35680 [Rhodococcus erythropolis PR4]
Length=261
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/217 (46%), Positives = 139/217 (65%), Gaps = 7/217 (3%)
Query 4 TRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGD 63
+R+R + A+ LMLVPL GC+RV+ S+ +S +D V+G+++AAA P N D GP L
Sbjct 13 SRKRFLTVAALALMLVPLLAGCIRVQVSMGVSANDRVTGQVVAAAIPANEADKGPQLTPP 72
Query 64 VPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVILE 122
K+ V Y DGYVGSQA FSDL+F ++ QL +M ++ +G ++L+R+G+ V L+
Sbjct 73 SSLEDKIRVQEYKKDGYVGSQAFFSDLSFGDVAQLGSMYAEGSGSFQITLKRSGDTVTLD 132
Query 123 GRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPN 182
G+ADL +V ADV++++AFPA V +TNG R V W L G VSTM A+ Y DP+
Sbjct 133 GKADLKTVPTQGADVQVSIAFPARVGTTNGTRDGDSRVSWTLPAGEVSTMRAEVNYADPS 192
Query 183 TRSFTGAGIWLGIAAFAAAGV---VAVLAWIDRDRSP 216
TRSF G W GI A A GV V +AW+ R+R+P
Sbjct 193 TRSFAG---WAGIMAGLALGVAIIVGAMAWMARNRAP 226
>gi|111018116|ref|YP_701088.1| lipoprotein [Rhodococcus jostii RHA1]
gi|110817646|gb|ABG92930.1| possible lipoprotein [Rhodococcus jostii RHA1]
Length=237
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/197 (51%), Positives = 126/197 (64%), Gaps = 7/197 (3%)
Query 24 GCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVGS 83
GCLRV+ S+ +S DD VSG+I+AAA P N +D GP L S KV V Y DGYVGS
Sbjct 31 GCLRVQVSMGVSADDRVSGQIVAAAVPANDQDKGPQLTPPDSLSGKVRVQEYKKDGYVGS 90
Query 84 QAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVILEGRADLTSVSDPDADVELTVA 142
QA FSDLTF ++ QL M+ A G +SL+R G++V L+G+ADL+SV DV+ T+A
Sbjct 91 QAFFSDLTFGDVQQLGTMSEQANGSFQISLQRTGDLVTLDGKADLSSVPAQGTDVQFTIA 150
Query 143 FPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAAG 202
FPA V +TNG R +V WKL G ST+ A+ RY+DP+TRSF G W GI A G
Sbjct 151 FPARVATTNGTREGDSIVSWKLPAGDTSTIRAEVRYSDPSTRSFAG---WAGIMAGVTLG 207
Query 203 V---VAVLAWIDRDRSP 216
V V LAW+ R+R P
Sbjct 208 VAVIVGALAWLARNRDP 224
>gi|325676961|ref|ZP_08156633.1| LppM protein [Rhodococcus equi ATCC 33707]
gi|325552261|gb|EGD21951.1| LppM protein [Rhodococcus equi ATCC 33707]
Length=225
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/195 (47%), Positives = 124/195 (64%), Gaps = 7/195 (3%)
Query 25 CLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVGSQ 84
CLRV+ S+ +S DD VSG+I+AA PK+ +D GP L + ++ V YD DGYVG+Q
Sbjct 18 CLRVQVSMGVSADDKVSGQIVAATVPKDEEDKGPQLTPPDSLADRMRVQEYDKDGYVGTQ 77
Query 85 AVFSDLTFAELPQLANMNSDAAGV-NLSLRRNGNIVILEGRADLTSVSDPDADVELTVAF 143
FS L+F E+ L +M++D +GV LSL+R G++V L+GR DL V DV+ T+AF
Sbjct 78 VFFSGLSFGEVRDLGSMSADTSGVLQLSLQRAGDLVSLDGRIDLEDVPAQGTDVQFTIAF 137
Query 144 PAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAAGV 203
PA V +TNG R V WKL G V+ + A+ RY DP+TRSF G W G++A A GV
Sbjct 138 PARVATTNGTRDGDSTVTWKLPAGEVTNLRAEVRYADPSTRSFAG---WAGMSAGVAIGV 194
Query 204 ---VAVLAWIDRDRS 215
V +AW+ R+R+
Sbjct 195 ALIVGGMAWLHRNRN 209
>gi|312140157|ref|YP_004007493.1| membrane protein [Rhodococcus equi 103S]
gi|311889496|emb|CBH48813.1| putative membrane protein [Rhodococcus equi 103S]
Length=225
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/195 (47%), Positives = 123/195 (64%), Gaps = 7/195 (3%)
Query 25 CLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVGSQ 84
CLRV+ S+ +S DD VSG+I+AA PK+ D GP L + ++ V YD DGYVG+Q
Sbjct 18 CLRVQVSMGVSADDKVSGQIVAATVPKDDDDKGPQLTPPDSLADRMRVQEYDKDGYVGTQ 77
Query 85 AVFSDLTFAELPQLANMNSDAAGV-NLSLRRNGNIVILEGRADLTSVSDPDADVELTVAF 143
FS L+F E+ L +M++D +GV LSL+R G++V L+GR DL V DV+ T+AF
Sbjct 78 VFFSGLSFGEVRDLGSMSADTSGVLQLSLQRAGDLVSLDGRIDLEDVPAQGTDVQFTIAF 137
Query 144 PAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAAGV 203
PA V +TNG R V WKL G V+ + A+ RY DP+TRSF G W G++A A GV
Sbjct 138 PARVATTNGTRDGDSTVTWKLPAGEVTNLRAEVRYADPSTRSFAG---WAGMSAGVAIGV 194
Query 204 ---VAVLAWIDRDRS 215
V +AW+ R+R+
Sbjct 195 ALIVGGMAWLHRNRN 209
>gi|54023719|ref|YP_117961.1| putative lipoprotein [Nocardia farcinica IFM 10152]
gi|54015227|dbj|BAD56597.1| putative lipoprotein [Nocardia farcinica IFM 10152]
Length=253
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/194 (47%), Positives = 118/194 (61%), Gaps = 4/194 (2%)
Query 3 RTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDG 62
RTR R A+ + +LVP+ GCLRV+ S+ +S +D VSG I+AA P + D GP L
Sbjct 19 RTRVRVASAVLLAALLVPMLAGCLRVQVSMGVSSNDRVSGRIVAAVVPASPDDKGPQLKA 78
Query 63 DVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVIL 121
+ KV V Y+ DGYVGS+ F DL+F ++ QL+ +N A G + L +R G++V L
Sbjct 79 PDSLAAKVRVEPYNQDGYVGSKVFFEDLSFGDVQQLSQLNEQAQGMLQLQFQRTGDLVSL 138
Query 122 EGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDP 181
GR DL SV +DV+ T+AFP+ V TNG R V WKL PG VST+ A+ Y DP
Sbjct 139 NGRVDLKSVPPHGSDVQFTIAFPSRVAKTNGTREGDNTVSWKLPPGEVSTLRAEVGYADP 198
Query 182 NTRSFTGAGIWLGI 195
NTRSF G W GI
Sbjct 199 NTRSFAG---WAGI 209
>gi|333918981|ref|YP_004492562.1| putative lipoprotein [Amycolicicoccus subflavus DQS3-9A1]
gi|333481202|gb|AEF39762.1| Possible lipoprotein [Amycolicicoccus subflavus DQS3-9A1]
Length=230
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/199 (44%), Positives = 117/199 (59%), Gaps = 8/199 (4%)
Query 23 TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVG 82
TGCL A+I +S DD +SG II A +P D GP L + V + +GYVG
Sbjct 30 TGCLYTDANIRLSEDDRLSGRIIVAQEPTEENDQGPQLRVPDSLYGRARVQRWSDEGYVG 89
Query 83 SQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVILEGRADLTSVSDPDADVELTV 141
S+ +FSDL+F + QL SDA G +L R+GN+V + GRADL +V D + V L V
Sbjct 90 SELIFSDLSFTDFRQLGQFASDAPGSFDLRFTRSGNVVTMTGRADLRNVPD-GSPVTLAV 148
Query 142 AFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIA---AF 198
+FP+ +T+TNG+ V W PG ++++ A+ YTDPNTRSF G W G+ +
Sbjct 149 SFPSNITTTNGEMTTNRSVVWTPAPGDLTSLRAETSYTDPNTRSFAG---WTGLMIALSV 205
Query 199 AAAGVVAVLAWIDRDRSPR 217
AAA +V LAW RDRSP+
Sbjct 206 AAAVIVGALAWFSRDRSPK 224
>gi|256375541|ref|YP_003099201.1| hypothetical protein Amir_1403 [Actinosynnema mirum DSM 43827]
gi|255919844|gb|ACU35355.1| hypothetical protein Amir_1403 [Actinosynnema mirum DSM 43827]
Length=217
Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/165 (42%), Positives = 97/165 (59%), Gaps = 1/165 (0%)
Query 23 TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVG 82
+GC+R+ A++ +S DDLV+GEI+AA P D GP L S +V Y +DGY G
Sbjct 21 SGCVRLHAAMALSQDDLVAGEIVAATPPTGDADAGPQLKVPDGLSDRVTTKAYQADGYAG 80
Query 83 SQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVILEGRADLTSVSDPDADVELTV 141
+Q FS LTF E+ LA S ++ L+ RR+G +V L G DLTSV AD+++ +
Sbjct 81 TQLSFSRLTFDEVKALATATSASSSRYQLNFRRSGELVTLSGSVDLTSVPAERADIQVKI 140
Query 142 AFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSF 186
+FP V TNG E V+ W KPG S ++A RY P+++S+
Sbjct 141 SFPGEVVDTNGREEEDAVLSWHPKPGQASMLTATVRYPGPDSQSW 185
>gi|331696600|ref|YP_004332839.1| hypothetical protein Psed_2786 [Pseudonocardia dioxanivorans
CB1190]
gi|326951289|gb|AEA24986.1| hypothetical protein Psed_2786 [Pseudonocardia dioxanivorans
CB1190]
Length=230
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/222 (39%), Positives = 123/222 (56%), Gaps = 9/222 (4%)
Query 5 RRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDV 64
RRR + A+ M ++++ +GC RVR ++ + PDD V+GE++ A K D GP L
Sbjct 13 RRRALSAVLMAVLVLGALSGCARVRTALALQPDDTVTGEVVIATPQKTPDDRGPTLTLPE 72
Query 65 PFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG---VNLSLRRNGNIVIL 121
+V VS+Y DGY GS FS L+F ++ QL ++ + AAG L+LRR GN V++
Sbjct 73 DLRSEVDVSDYRQDGYAGSVLRFSGLSFDQVAQLTSV-AGAAGEQRTQLTLRRAGNRVLV 131
Query 122 EGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDP 181
G+ DLT++ AD +L ++ P V TNGD + + W PG V + A Y DP
Sbjct 132 SGKVDLTTIPVDRADFQLKISAPGEVLDTNGD-TDSGTISWNFTPGEVGDIRASLAYDDP 190
Query 182 NTRSFTGAGIW-LGIAAFAAAGVVAVLAWIDRDRSPRLTASG 222
N S T W LG+A AA V V+A RDR+ LT +G
Sbjct 191 NAPSATA---WTLGLALLVAAVSVGVVALARRDRNEPLTPAG 229
>gi|325000134|ref|ZP_08121246.1| putative lipoprotein [Pseudonocardia sp. P1]
Length=228
Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/187 (39%), Positives = 106/187 (57%), Gaps = 2/187 (1%)
Query 3 RTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDG 62
RTR R A+ ++++ + TGC RV+ ++ + PDD V G ++ A GP +
Sbjct 13 RTRGRSKAAVLLVVLALITLTGCTRVQVAMAVQPDDTVDGTVVVATPDGAPDGDGPTMTV 72
Query 63 DVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG-VNLSLRRNGNIVIL 121
+V VS YD DGYVGSQA F+DLTFAE+ +L + +A G N+ +RR G + +
Sbjct 73 PPELEGRVDVSAYDQDGYVGSQASFTDLTFAEVSELNALGGNAGGRANVEMRRVGERIAV 132
Query 122 EGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDP 181
+GRADLT++ +DV L ++FP V ++GD + V W PG VS ++A TDP
Sbjct 133 QGRADLTTMPVDRSDVRLAMSFPGEVVESDGD-ADGSTVTWNFAPGEVSQLNASVVSTDP 191
Query 182 NTRSFTG 188
N S G
Sbjct 192 NAPSVLG 198
>gi|296140356|ref|YP_003647599.1| lipoprotein [Tsukamurella paurometabola DSM 20162]
gi|296028490|gb|ADG79260.1| putative lipoprotein [Tsukamurella paurometabola DSM 20162]
Length=255
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/225 (36%), Positives = 122/225 (55%), Gaps = 18/225 (8%)
Query 2 ARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD 61
+R R +LA MLL L + T C P D +SG+IIAA P + GP L
Sbjct 18 SRFRPARLLAAVMLLFLAAVPTAC------ANPGPGDRMSGKIIAAQTPA-ADPKGPQLA 70
Query 62 GDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLAN-----MNSDAAGVNLSLRRNG 116
+ + V YDS+G +G+Q +F +TF + QL + A + + ++RNG
Sbjct 71 VPGELTGQAQVQAYDSNGRIGTQMLFETITFGQFNQLGEVVSQAFETSATSMKMRVQRNG 130
Query 117 NIVILEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQA 176
N VIL G AD+ S++ A + ++V FP VT+TNG + ++V W L G + ++A+A
Sbjct 131 NTVILSGTADMASLAPNSAVIVVSVQFPGPVTATNGQQESNDLVTWTLNAGTSAALTAEA 190
Query 177 RYTDPNTRSFTGAGIWLGIAA---FAAAGVVAVLAWIDRDRSPRL 218
Y DP+ SFT +W I A F AA +VA +A+++RDRS ++
Sbjct 191 DYADPSIASFT---LWTWITAIVSFLAAALVAAVAYVNRDRSAKV 232
>gi|291004279|ref|ZP_06562252.1| lipoprotein [Saccharopolyspora erythraea NRRL 2338]
Length=231
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/226 (34%), Positives = 122/226 (54%), Gaps = 23/226 (10%)
Query 5 RRRGMLAIAMLLMLVPLA----TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
R G+ A LL+++ L+ +GCL RAS++I +DLVSGE++ + +
Sbjct 7 RAAGLRMRAALLLVIGLSAVLLSGCLHARASLSIDNEDLVSGELLVSTQTP--------- 57
Query 61 DGDVPF--------SQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLAN-MNSDAAGVNLS 111
DG VPF + +V+V Y +DG VGS F LTF EL +LA +N + L
Sbjct 58 DGQVPFRLEPPPDLADRVSVEPYSADGRVGSHLSFQGLTFEELDRLAKALNPSDSRYRLQ 117
Query 112 LRRNGNIVILEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVST 171
L+R+G++VIL+G DLT +S D+ + ++ P +T+TNG +V W + G ++
Sbjct 118 LKRSGSLVILDGAVDLTPLSGTDSAFTVELSAPGEITNTNGQET-AGMVTWHPEAGELNE 176
Query 172 MSAQARYTDPNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPR 217
+SA +Y+ +++ + +G A AA +V VLA +R+ R
Sbjct 177 LSATYQYSGDQDQAWLTWALLIGGVALGAAVLVGVLAQQSHERAHR 222
>gi|134098301|ref|YP_001103962.1| lipoprotein [Saccharopolyspora erythraea NRRL 2338]
gi|133910924|emb|CAM01037.1| possible lipoprotein [Saccharopolyspora erythraea NRRL 2338]
Length=219
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/218 (34%), Positives = 119/218 (55%), Gaps = 23/218 (10%)
Query 13 AMLLMLVPLA----TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPF-- 66
A LL+++ L+ +GCL RAS++I +DLVSGE++ + + DG VPF
Sbjct 3 AALLLVIGLSAVLLSGCLHARASLSIDNEDLVSGELLVSTQTP---------DGQVPFRL 53
Query 67 ------SQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLAN-MNSDAAGVNLSLRRNGNIV 119
+ +V+V Y +DG VGS F LTF EL +LA +N + L L+R+G++V
Sbjct 54 EPPPDLADRVSVEPYSADGRVGSHLSFQGLTFEELDRLAKALNPSDSRYRLQLKRSGSLV 113
Query 120 ILEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYT 179
IL+G DLT +S D+ + ++ P +T+TNG +V W + G ++ +SA +Y+
Sbjct 114 ILDGAVDLTPLSGTDSAFTVELSAPGEITNTNGQET-AGMVTWHPEAGELNELSATYQYS 172
Query 180 DPNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPR 217
+++ + +G A AA +V VLA +R+ R
Sbjct 173 GDQDQAWLTWALLIGGVALGAAVLVGVLAQQSHERAHR 210
>gi|343924196|ref|ZP_08763759.1| hypothetical protein GOALK_002_01500 [Gordonia alkanivorans NBRC
16433]
gi|343766001|dbj|GAA10685.1| hypothetical protein GOALK_002_01500 [Gordonia alkanivorans NBRC
16433]
Length=295
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/249 (33%), Positives = 117/249 (47%), Gaps = 38/249 (15%)
Query 2 ARTRRRGMLAIAML-LMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPAL 60
+R RR LA+A++ L+L PL GCL ++ D SG +I A P N + P L
Sbjct 18 SRPRRLMPLAVAVVTLLLSPLMAGCLERSTTV----GDRYSGSVIVATSPDNPRG-APQL 72
Query 61 DGDVPFSQKVAVSNY-----------------DSDG----------YVGSQAVFSDLTFA 93
D +V+V+ Y D G VGS+A FSDLT
Sbjct 73 DLPESMMGQVSVTEYKETPEESAAPSGSADRDDRSGDAGNGEEAVTRVGSRASFSDLTAG 132
Query 94 ELPQLANMNSDAAG-----VNLSLRRNGNIVILEGRADLTSVSDPDADVELTVAFPAAVT 148
+ QL ++ +DA G ++L+ +R+G +V G DL+ + V+LTV F VT
Sbjct 133 QFGQLGDIIADAYGDTSLTMDLTAKRSGEVVRFRGDTDLSELIPGRDFVQLTVTFGGPVT 192
Query 149 STNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAAGVVAVLA 208
+TNGD++ V W PG S +A A Y DP T + + ++ I A ++A LA
Sbjct 193 ATNGDQVGESTVTWTPAPGEPSDFTADATYPDPATAAVSSWSWFVAIVCLIAVLIIARLA 252
Query 209 WIDRDRSPR 217
+ R R PR
Sbjct 253 YAKRYRGPR 261
>gi|262202923|ref|YP_003274131.1| hypothetical protein Gbro_3031 [Gordonia bronchialis DSM 43247]
gi|262086270|gb|ACY22238.1| hypothetical protein Gbro_3031 [Gordonia bronchialis DSM 43247]
Length=310
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/254 (30%), Positives = 117/254 (47%), Gaps = 43/254 (16%)
Query 2 ARTRRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD 61
A TRR M+A ++L+ PL +GCL ++ D SG +I A P N + P LD
Sbjct 10 AATRRLSMVAALIMLVASPLLSGCLERSTTV----GDRYSGTVIVATSPDNPRG-APKLD 64
Query 62 GDVPFSQKVAVSNY---------------------------------DSDGYVGSQAVFS 88
+ +V++++Y D VG++A FS
Sbjct 65 LPESMASRVSITDYRETPQPAGASTPPSGASTTTTAPRSTPGLPSEEDRATRVGTRATFS 124
Query 89 DLTFAELPQLANMNSDAAG-----VNLSLRRNGNIVILEGRADLTSVSDPDADVELTVAF 143
LT + QL N+ +DA G ++L +R+G +V G DL+ ++ V+LTV F
Sbjct 125 GLTAGQFGQLGNIVADAFGDTAVTMDLDAKRSGEVVRFRGTTDLSDLNAQRDFVQLTVTF 184
Query 144 PAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAAGV 203
+T+TNG++ V W +PG S SA A Y DP T + + ++ I V
Sbjct 185 AGPITATNGEQTGESSVTWTPEPGKPSDFSADATYPDPATAAVSSWSWFIAIVCVIVVIV 244
Query 204 VAVLAWIDRDRSPR 217
+ V+A+ RDRSPR
Sbjct 245 IIVIAYQSRDRSPR 258
>gi|319949928|ref|ZP_08023927.1| hypothetical protein ES5_10512 [Dietzia cinnamea P4]
gi|319436407|gb|EFV91528.1| hypothetical protein ES5_10512 [Dietzia cinnamea P4]
Length=252
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (33%), Positives = 100/207 (49%), Gaps = 18/207 (8%)
Query 8 GMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDVPFS 67
G+ +A LL+++ TGCL++ A +++ DD VSG I+ A L
Sbjct 38 GLTTLAALLIVL---TGCLQLNAQMSVRKDDTVSGRILIAGDQPEQAAALERLGAPSGLE 94
Query 68 QKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG---VNLSLRRNGNIVILEGR 124
QKV ++ Y +DG+ G + F+ LTFAE+ L + D G L RR+G+ V G
Sbjct 95 QKVRITPYSADGFTGREIYFTQLTFAEMDTL-TLAIDIEGARPYTLGFRRSGDTVSFSGA 153
Query 125 ADLT-----SVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYT 179
DL+ V V+LT FP ++ TNG V W PG ++ M A + Y
Sbjct 154 IDLSMLPADRVGSTTTRVDLT--FPNRISETNGTVGAGNSVSWTPAPGSITRMQASSSYP 211
Query 180 DPNTRSFTGAGIWLGIAAFAAAGVVAV 206
DP TR F +W+ I AA +V++
Sbjct 212 DPATRGF---AVWM-IVGIGAALLVSI 234
>gi|326382547|ref|ZP_08204238.1| hypothetical protein SCNU_06395 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198666|gb|EGD55849.1| hypothetical protein SCNU_06395 [Gordonia neofelifaecis NRRL
B-59395]
Length=271
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/243 (30%), Positives = 106/243 (44%), Gaps = 35/243 (14%)
Query 5 RRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDV 64
RR LA+ LL ++PL +GCL ++ D SG +I A P + T P+ D
Sbjct 5 RRAPALALVGLLAMLPLLSGCLTKSTTV----GDQFSGTVIVATSP-DQHPTKPSFDIPA 59
Query 65 PFSQKVAVSNY-----DS--------------------DGYVGSQAVFSDLTFAELPQLA 99
S +V ++Y DS DG VGS+ F L+ + QL
Sbjct 60 SLSGQVWATDYPEKSDDSTAAPAPSSTPAAPPNGAPSPDGKVGSELSFDRLSAGQFSQLG 119
Query 100 NMNSDA-----AGVNLSLRRNGNIVILEGRADLTSVSDPDADVELTVAFPAAVTSTNGDR 154
++ + A A V+L R+G+IV G A LT L++ F V +TNG +
Sbjct 120 DIIAAALPDPSATVHLKSSRSGDIVRFRGSASLTGTEPDSVYFSLSITFGGDVVATNGKQ 179
Query 155 IEPEVVQWKLKPGVVSTMSAQARYTDPNTRSFTGAGIWLGIAAFAAAGVVAVLAWIDRDR 214
I + V W +PG M A + Y DP T + ++ + G+V A+ +RDR
Sbjct 180 IGDDTVVWTPRPGQNVDMQADSEYADPATAAVPSWTWFMFLLCAIIVGMVVYAAYQNRDR 239
Query 215 SPR 217
S R
Sbjct 240 SAR 242
>gi|213965228|ref|ZP_03393425.1| putative lipoprotein [Corynebacterium amycolatum SK46]
gi|213952080|gb|EEB63465.1| putative lipoprotein [Corynebacterium amycolatum SK46]
Length=194
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/151 (36%), Positives = 69/151 (46%), Gaps = 9/151 (5%)
Query 19 VPLATGCLRVRASITISPDDLVSGEI-IAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDS 77
+PL+ GC +A ITIS DD VSG I + + S+ VP VS
Sbjct 1 MPLS-GCFDAQAGITISGDDRVSGTIHVTPTEEVRSQ----FEQWQVPDDLSGRVSQGVI 55
Query 78 DGYVGSQAV-FSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPDAD 136
D G V F++L F EL SD R G + + G DLT + P A
Sbjct 56 DSSTGKMEVSFNELHFIELTDTLRQLSDDRIDIDLDRTGGGKISMNGHMDLTHL--PGAK 113
Query 137 VELTVAFPAAVTSTNGDRIEPEVVQWKLKPG 167
V+ VAFP VT +NG + EP V+W+L G
Sbjct 114 VDFVVAFPEQVTDSNGRQTEPNKVEWQLASG 144
>gi|291299736|ref|YP_003511014.1| hypothetical protein Snas_2231 [Stackebrandtia nassauensis DSM
44728]
gi|290568956|gb|ADD41921.1| hypothetical protein Snas_2231 [Stackebrandtia nassauensis DSM
44728]
Length=214
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (29%), Positives = 86/191 (46%), Gaps = 30/191 (15%)
Query 23 TGCLRVRASITISPDDLVSGEIIAAAK--------PKNSKDTGPALDGDVPFSQKVAVSN 74
TGC++V + TI PDD V GE+ AA + + + AL D+P + +
Sbjct 8 TGCIKVDLAATIKPDDTVDGELTAAVNIEALDAIGDEEADEFVKALTDDIPGATR--AEP 65
Query 75 YDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADL----TSV 130
Y+ +VG F+D+ A+ A+ +A LS+ + IL G DL T
Sbjct 66 YNDGEFVGKTVHFADVPLAKFN--ASETDEAEDAQLSITHDEGHYILNGEWDLPRADTGG 123
Query 131 SDPDADVELT--------VAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPN 182
S PD D E+ V FP V + NGD ++ + V W L+ G + + A++ +
Sbjct 124 SFPDLDKEIVNSAEFSVKVTFPGPVIAHNGD-LDGQTVTWNLELGKNNILRAES-----D 177
Query 183 TRSFTGAGIWL 193
S T +W+
Sbjct 178 QASNTALALWV 188
>gi|256833640|ref|YP_003162367.1| hypothetical protein Jden_2432 [Jonesia denitrificans DSM 20603]
gi|256687171|gb|ACV10064.1| hypothetical protein Jden_2432 [Jonesia denitrificans DSM 20603]
Length=313
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/181 (28%), Positives = 75/181 (42%), Gaps = 34/181 (18%)
Query 23 TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD---------GDVPFSQKVAV- 72
TGC+RV +T++ D+ SGEII A + ++ G + GD Q +
Sbjct 24 TGCVRVHTDLTLNNDNTASGEIIFAVSDEFAESLGMTPEEVADALLTTGDGAADQGIGAG 83
Query 73 ----SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEG----- 123
Y D Y G++ VF + +N A LS+ R ++ ++ G
Sbjct 84 ATSEEPYQEDSYTGTRYVF---------EATPINDTANDEALSIIREDDVFVVSGVFEDQ 134
Query 124 --RADLTSVSDP---DADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARY 178
+L + DP DV ++ FP V TNGD I+ + V W PG M A+
Sbjct 135 LSDPELAGLEDPMLSSMDVRFSITFPGDVIETNGD-IDGKTVTWTYTPGEDLVMEARGEA 193
Query 179 T 179
T
Sbjct 194 T 194
>gi|336319324|ref|YP_004599292.1| hypothetical protein Celgi_0196 [Cellvibrio gilvus ATCC 13127]
gi|336102905|gb|AEI10724.1| hypothetical protein Celgi_0196 [Cellvibrio gilvus ATCC 13127]
Length=287
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/177 (26%), Positives = 75/177 (43%), Gaps = 23/177 (12%)
Query 12 IAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD---GDV-PFS 67
+A +M++ +GC+++ + + DD V G ++ AA + G + D GD PF
Sbjct 14 VAGAVMVLLALSGCMKLDMDVAFNKDDTVEGTVVMAASKAALETMGASFDDLVGDEDPFD 73
Query 68 QKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVI------- 120
Y+ D +VG T +P L + + V +G +
Sbjct 74 GDATSEPYEDDTFVGRT-----YTLKAVP-LEDFGDETMSVT---HEDGKFTVDGSLPLD 124
Query 121 LEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQAR 177
+E D +S A++ +T FP V S NG RI+ V W+ +PG M A A+
Sbjct 125 MESGMDAEQLS--GAEITITFRFPGPVESANG-RIDGNAVTWEGEPGTTLEMQAVAK 178
>gi|334335841|ref|YP_004540993.1| hypothetical protein Isova_0297 [Isoptericola variabilis 225]
gi|334106209|gb|AEG43099.1| hypothetical protein Isova_0297 [Isoptericola variabilis 225]
Length=257
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/180 (25%), Positives = 78/180 (44%), Gaps = 30/180 (16%)
Query 5 RRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAA----------AKPKNSK 54
RRR LA + + +GC+++ ++T++ D SG + A A+P+
Sbjct 8 RRRPWLAAPLAVAAALALSGCMKMDLALTLTEGDTASGTFVVAFSDELAEAMGAEPQELW 67
Query 55 DTG-PALDGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLR 113
+ G A+ GD+P + Y Y G + F++ +EL AG L++
Sbjct 68 EQGSEAVAGDLP--EGATEEPYADGEYTGGRYTFAEQPVSEL-------GGVAGEELTVT 118
Query 114 RNGNIVILEGRADLT------SVSDPDA----DVELTVAFPAAVTSTNGDRIEPEVVQWK 163
R G+ ++ G DLT + P+ D + + FP V TNG+ + V+W+
Sbjct 119 REGDEYVVSGAMDLTDDTGELESAPPELVDSFDARVAITFPGEVVDTNGEVVGTNTVEWR 178
>gi|229822133|ref|YP_002883659.1| hypothetical protein Bcav_3655 [Beutenbergia cavernae DSM 12333]
gi|229568046|gb|ACQ81897.1| hypothetical protein Bcav_3655 [Beutenbergia cavernae DSM 12333]
Length=268
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/223 (26%), Positives = 93/223 (42%), Gaps = 53/223 (23%)
Query 6 RRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAA---------AKPK---NS 53
RRGM A+A+++++ L TGC+RV + +S D VSG ++ A AK + +
Sbjct 8 RRGM-AVALIVLVSGLLTGCVRVIGDLRVSEADTVSGTLVIAVALVDDTDDAKERAAGQA 66
Query 54 KDTGPALDGDVPFSQKVAVSNYDSDGYVGSQAVFSDL----------------------- 90
++ L ++ +Q V Y Y+G+Q FSD
Sbjct 67 REIENRLLPEIRQAQGVRSDAYRQGDYLGTQLTFSDTPLDVFSLTNVLPPPEAPADDAAE 126
Query 91 -----TFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPD----ADVELTV 141
T A++P L D VN + + ++L+G PD + V +++
Sbjct 127 ASEEPTAADVPLLITHEGDDYVVNAEI----DPMVLDGAPRAEEGERPDGADSSRVSISI 182
Query 142 AFPAAVTSTNGDRIEPEVVQWKL---KPGVVSTMSAQARYTDP 181
+FP V S NG+ + V W +P V+S + AR P
Sbjct 183 SFPGDVESHNGE-LADRTVTWTTTYDEPLVMSARAGDARPEGP 224
>gi|269796806|ref|YP_003316261.1| hypothetical protein Sked_35390 [Sanguibacter keddieii DSM 10542]
gi|269098991|gb|ACZ23427.1| hypothetical protein Sked_35390 [Sanguibacter keddieii DSM 10542]
Length=425
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/178 (26%), Positives = 71/178 (40%), Gaps = 36/178 (20%)
Query 23 TGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALD----------GDVPFSQKVAV 72
TGC+RV+A +S DD V+ +++ A + + G + D GD F +
Sbjct 18 TGCMRVQADFVLSEDDTVNLDMVMAIEDATIEQLGLSADDFLGQMDTELGDDLFMPGMDR 77
Query 73 SNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGR-------- 124
Y DG+ G + D A + SD +S R+G+ ++ G+
Sbjct 78 EEYKEDGHTGYRYSSEDAPLA-------VVSDEV---MSFTRDGDEYVVSGQLENSDMGF 127
Query 125 -----ADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQAR 177
AD + + D+ +V FP VT NG I+ V W G T+ AR
Sbjct 128 TESDIADFEAFGMSEPDITFSVTFPGEVTDANG-VIDGNTVTWTYVLG--ETLDFDAR 182
>gi|284030932|ref|YP_003380863.1| hypothetical protein Kfla_2999 [Kribbella flavida DSM 17836]
gi|283810225|gb|ADB32064.1| hypothetical protein Kfla_2999 [Kribbella flavida DSM 17836]
Length=369
Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/155 (22%), Positives = 72/155 (47%), Gaps = 20/155 (12%)
Query 5 RRRGMLAIAMLLMLVPLATGCLRVRASITISPDDLVSGEIIAAAKPKNSKDTGPALDGDV 64
+ R +A+ ++ LV L TGC+++ A + ++ ++ VSG + + + +G +LD
Sbjct 2 KNRVRMALVIVACLVGL-TGCVKLDADLKVNSNETVSGSMQIGVDKQLVQSSGQSLDAIR 60
Query 65 PFSQK---------VAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRN 115
+K V YD D Y+GS F ++ F+++ + G ++ R++
Sbjct 61 QQVEKQMKQTTTDGVTCKPYDDDKYLGSTCEFDNVPFSKM-------GGSTGEGVTFRKD 113
Query 116 GNIVILEGR-ADLTSVSDPDAD--VELTVAFPAAV 147
G+ ++ + AD+ S + A + V P +
Sbjct 114 GDRFVVSVKDADIGSQTPSGAQPVINFKVTMPGKI 148
>gi|170078895|ref|YP_001735533.1| penicillin-binding protein [Synechococcus sp. PCC 7002]
gi|169886564|gb|ACB00278.1| penicillin-binding protein [Synechococcus sp. PCC 7002]
Length=641
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/69 (34%), Positives = 38/69 (56%), Gaps = 2/69 (2%)
Query 108 VNLSLRRNGNIVILEGRADLTSVSDPDADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPG 167
++LSLRRNGN IL G ++ D ++EL++ P + ++ ++ +K K G
Sbjct 230 ISLSLRRNGNGAILPGNLQAEAMKYDDWELELSLDLPLQKAARQA--LQKQMAAYKAKRG 287
Query 168 VVSTMSAQA 176
VV M AQ+
Sbjct 288 VVIVMDAQS 296
>gi|326772431|ref|ZP_08231715.1| translation initiation factor IF-2 [Actinomyces viscosus C505]
gi|326637063|gb|EGE37965.1| translation initiation factor IF-2 [Actinomyces viscosus C505]
Length=283
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/90 (34%), Positives = 41/90 (46%), Gaps = 3/90 (3%)
Query 136 DVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS-FTGAGIWL- 193
D +++V FP AVT + G ++ V W V +SA D S +T + IWL
Sbjct 192 DTKVSVTFPGAVTQSGGGKVSGTTVTWDDPDTVAKGVSASGYAQDSRGVSWWTRSRIWLT 251
Query 194 -GIAAFAAAGVVAVLAWIDRDRSPRLTASG 222
G+A VAVL R+PR A G
Sbjct 252 AGLALLGGVLTVAVLRRRSSGRAPRQAAPG 281
>gi|51891891|ref|YP_074582.1| hypothetical protein STH753 [Symbiobacterium thermophilum IAM
14863]
gi|51855580|dbj|BAD39738.1| conserved hypothetical protein [Symbiobacterium thermophilum
IAM 14863]
Length=238
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/174 (25%), Positives = 72/174 (42%), Gaps = 27/174 (15%)
Query 24 GCLRVRASITISPDDLVSGEIIAA--------AKPKNSKDTGPALDGDVPFSQKVAVSNY 75
GC+R+ ++ ++PD EIIAA A ++D L+ ++ K V+ Y
Sbjct 29 GCVRLELNLRVNPDGTGEKEIIAAIDREFLAVAAAMRARDPLARLEAELREDPKATVTRY 88
Query 76 DSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLR-------RNGNIVILEGRADLT 128
VG +AV A +N + + +R ++ L A+L
Sbjct 89 QLGDMVGFRAV------APFRNELILNDETWKGHFLIRDRIFWRDYTLDLETLLDMAELD 142
Query 129 SVS---DPDADVELTVAFPAAVTSTNGDRIEP--EVVQWKLKPGVVSTMSAQAR 177
+V+ D D ++V PA + TNG+ ++P V W L PG + AR
Sbjct 143 AVAASFDSPVDFRVSVELPARIGETNGE-LDPSGRKVTWTLIPGRRDHLVLTAR 195
>gi|239989747|ref|ZP_04710411.1| putative two-component system sensor kinase [Streptomyces roseosporus
NRRL 11379]
Length=518
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/92 (34%), Positives = 47/92 (52%), Gaps = 9/92 (9%)
Query 96 PQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSDPDADVE--LTVAFPAAVTSTNGD 153
P +++ AA V+ L G +++ DLT+VSD AD E +T AAV + NG
Sbjct 88 PDQRSLSRFAAQVSEGL---GARIVVARHQDLTAVSDAYADTEGRITAELRAAVRAGNGA 144
Query 154 RIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS 185
R + VQW+ +P +V M Y D + R+
Sbjct 145 RFQR--VQWRGEPYLVVGMPVT--YADGDRRT 172
Lambda K H
0.316 0.131 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 291076174136
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40