BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2172c
Length=301
Score E
Sequences producing significant alignments: (Bits) Value
gi|253798765|ref|YP_003031766.1| hypothetical protein TBMG_01810... 615 3e-174
gi|15841662|ref|NP_336699.1| hypothetical protein MT2228 [Mycoba... 613 8e-174
gi|15609309|ref|NP_216688.1| hypothetical protein Rv2172c [Mycob... 612 2e-173
gi|289762331|ref|ZP_06521709.1| conserved hypothetical protein [... 610 6e-173
gi|240168231|ref|ZP_04746890.1| hypothetical protein MkanA1_0289... 521 7e-146
gi|296166037|ref|ZP_06848486.1| conserved hypothetical protein [... 514 7e-144
gi|41408008|ref|NP_960844.1| hypothetical protein MAP1910c [Myco... 511 7e-143
gi|118464132|ref|YP_881526.1| hypothetical protein MAV_2322 [Myc... 509 2e-142
gi|254819741|ref|ZP_05224742.1| hypothetical protein MintA_07449... 509 2e-142
gi|15827421|ref|NP_301684.1| hypothetical protein ML0901 [Mycoba... 509 3e-142
gi|183983197|ref|YP_001851488.1| hypothetical protein MMAR_3207 ... 508 4e-142
gi|118618809|ref|YP_907141.1| hypothetical protein MUL_3515 [Myc... 507 1e-141
gi|342859882|ref|ZP_08716535.1| hypothetical protein MCOL_13423 ... 497 1e-138
gi|120406712|ref|YP_956541.1| hypothetical protein Mvan_5770 [My... 476 3e-132
gi|315446609|ref|YP_004079488.1| hypothetical protein Mspyr1_512... 471 4e-131
gi|145221654|ref|YP_001132332.1| hypothetical protein Mflv_1061 ... 469 2e-130
gi|108802158|ref|YP_642355.1| hypothetical protein Mmcs_5197 [My... 467 1e-129
gi|118472782|ref|YP_890808.1| hypothetical protein MSMEG_6596 [M... 449 2e-124
gi|333990370|ref|YP_004522984.1| hypothetical protein JDM601_173... 441 5e-122
gi|169631696|ref|YP_001705345.1| hypothetical protein MAB_4622c ... 423 2e-116
gi|324997260|ref|ZP_08118372.1| hypothetical protein PseP1_00784... 417 1e-114
gi|118470282|ref|YP_890858.1| hypothetical protein MSMEG_6649 [M... 414 1e-113
gi|134100431|ref|YP_001106092.1| hypothetical protein SACE_3896 ... 401 8e-110
gi|325675064|ref|ZP_08154750.1| hypothetical protein HMPREF0724_... 319 3e-85
gi|312137776|ref|YP_004005112.1| hypothetical protein REQ_02820 ... 309 4e-82
gi|303287935|ref|XP_003063256.1| predicted protein [Micromonas p... 51.2 2e-04
gi|255089244|ref|XP_002506544.1| predicted protein [Micromonas s... 44.7 0.020
gi|297621946|ref|YP_003710083.1| hypothetical protein wcw_1736 [... 43.9 0.033
gi|325285671|ref|YP_004261461.1| gliding motility-associated pro... 39.3 0.86
gi|296272942|ref|YP_003655573.1| hypothetical protein Arnit_1408... 38.9 0.91
gi|75675114|ref|YP_317535.1| homospermidine synthase [Nitrobacte... 38.1 1.6
gi|85715884|ref|ZP_01046862.1| homospermidine synthase [Nitrobac... 37.4 2.6
gi|192289361|ref|YP_001989966.1| Homospermidine synthase [Rhodop... 37.4 2.6
gi|299132176|ref|ZP_07025371.1| Homospermidine synthase [Afipia ... 37.0 3.4
gi|39933942|ref|NP_946218.1| homospermidine synthase [Rhodopseud... 37.0 3.9
gi|316932409|ref|YP_004107391.1| homospermidine synthase [Rhodop... 37.0 3.9
gi|27382873|ref|NP_774402.1| homospermidine synthase [Bradyrhizo... 37.0 3.9
gi|338973185|ref|ZP_08628553.1| homospermidine synthase(HSS) [Br... 36.6 4.6
gi|325279207|ref|YP_004251749.1| TonB-dependent receptor plug [O... 36.6 5.1
gi|241664246|ref|YP_002982606.1| hypothetical protein Rpic12D_26... 36.6 5.3
gi|91975330|ref|YP_567989.1| homospermidine synthase [Rhodopseud... 36.2 6.0
gi|170751426|ref|YP_001757686.1| homospermidine synthase [Methyl... 35.8 8.4
gi|90426305|ref|YP_534675.1| homospermidine synthase [Rhodopseud... 35.8 9.0
gi|322696629|gb|EFY88418.1| C6 transcription factor, putative [M... 35.8 9.5
>gi|253798765|ref|YP_003031766.1| hypothetical protein TBMG_01810 [Mycobacterium tuberculosis KZN
1435]
gi|289554043|ref|ZP_06443253.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|253320268|gb|ACT24871.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289438675|gb|EFD21168.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|328458528|gb|AEB03951.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=307
Score = 615 bits (1586), Expect = 3e-174, Method: Compositional matrix adjust.
Identities = 301/301 (100%), Positives = 301/301 (100%), Gaps = 0/301 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP
Sbjct 7 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 66
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT
Sbjct 67 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 126
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA
Sbjct 127 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 186
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS
Sbjct 187 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 246
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 300
EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP
Sbjct 247 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 306
Query 301 D 301
D
Sbjct 307 D 307
>gi|15841662|ref|NP_336699.1| hypothetical protein MT2228 [Mycobacterium tuberculosis CDC1551]
gi|13881915|gb|AAK46513.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=326
Score = 613 bits (1582), Expect = 8e-174, Method: Compositional matrix adjust.
Identities = 301/301 (100%), Positives = 301/301 (100%), Gaps = 0/301 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP
Sbjct 26 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 85
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT
Sbjct 86 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 145
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA
Sbjct 146 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 205
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS
Sbjct 206 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 265
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 300
EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP
Sbjct 266 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 325
Query 301 D 301
D
Sbjct 326 D 326
>gi|15609309|ref|NP_216688.1| hypothetical protein Rv2172c [Mycobacterium tuberculosis H37Rv]
gi|31793350|ref|NP_855843.1| hypothetical protein Mb2194c [Mycobacterium bovis AF2122/97]
gi|121638052|ref|YP_978276.1| hypothetical protein BCG_2187c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
71 more sequence titles
Length=301
Score = 612 bits (1579), Expect = 2e-173, Method: Compositional matrix adjust.
Identities = 300/301 (99%), Positives = 301/301 (100%), Gaps = 0/301 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP
Sbjct 1 MTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT
Sbjct 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA
Sbjct 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS
Sbjct 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 300
EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP
Sbjct 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 300
Query 301 D 301
D
Sbjct 301 D 301
>gi|289762331|ref|ZP_06521709.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709837|gb|EFD73853.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=301
Score = 610 bits (1574), Expect = 6e-173, Method: Compositional matrix adjust.
Identities = 299/301 (99%), Positives = 301/301 (100%), Gaps = 0/301 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP
Sbjct 1 MTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT
Sbjct 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYG+TQLLYSDA
Sbjct 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGVTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS
Sbjct 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 300
EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP
Sbjct 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGKP 300
Query 301 D 301
D
Sbjct 301 D 301
>gi|240168231|ref|ZP_04746890.1| hypothetical protein MkanA1_02892 [Mycobacterium kansasii ATCC
12478]
Length=298
Score = 521 bits (1341), Expect = 7e-146, Method: Compositional matrix adjust.
Identities = 247/298 (83%), Positives = 274/298 (92%), Gaps = 0/298 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPN++GG ERA+EDA K+++YSA SGLDGRIRHVM+PGMIAEDDDRP+P
Sbjct 1 MTLNTIALELVPPNVDGGHERALEDAHKLLRYSAESGLDGRIRHVMIPGMIAEDDDRPVP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQPKLDVLDFWSII+PEL + GLCTQVTAFMDE +LH RL +L AGMEG+VFVGVPRT
Sbjct 61 MQPKLDVLDFWSIIRPELPSISGLCTQVTAFMDESTLHGRLAELCAAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR+LVANRGVIVIPTRDGEQGRLNFKC++GATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSIYRELVANRGVIVIPTRDGEQGRLNFKCNQGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFL FA T+HRPEILLSFGFVPKVE R+GLINWLIQDPGNAAVA+EQ FVQKLAGS
Sbjct 181 IVGFLTAFAEATDHRPEILLSFGFVPKVEARVGLINWLIQDPGNAAVAEEQEFVQKLAGS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPG 298
EPA++RRLMVDLY+RVLDGV DLGFPLSIH EATYG+SA AFETFAEML YW+P + G
Sbjct 241 EPAQKRRLMVDLYQRVLDGVVDLGFPLSIHFEATYGLSAPAFETFAEMLDYWAPDKQG 298
>gi|296166037|ref|ZP_06848486.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898602|gb|EFG78159.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=303
Score = 514 bits (1324), Expect = 7e-144, Method: Compositional matrix adjust.
Identities = 242/296 (82%), Positives = 273/296 (93%), Gaps = 0/296 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
VTLNTIALELVPPN + G+ERA+EDARKVVQYSA SGL GR+RHVM+PG+IAEDDDRPI
Sbjct 6 VTLNTIALELVPPNADEGRERALEDARKVVQYSAESGLTGRLRHVMIPGIIAEDDDRPIT 65
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWS++KPELAG+HGLCTQVTAF DEP+L +RL DL DAGMEG+VFVGVPRT
Sbjct 66 MKPKLDVLDFWSMVKPELAGMHGLCTQVTAFSDEPTLRKRLTDLRDAGMEGVVFVGVPRT 125
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR LV NRGVI+IPTRDGE GR NFKC +GATYGMTQLLYSDA
Sbjct 126 MNDGEGSGVAPTDALSIYRDLVPNRGVILIPTRDGEHGRFNFKCDQGATYGMTQLLYSDA 185
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFA+ T+HRPEILLSFGFVPK+E+R+GLINWLIQDPGN AVA EQ FV++LA S
Sbjct 186 IVGFLREFAKNTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNPAVAAEQEFVKRLAAS 245
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAE 296
EP ++R+LMVDLYKRV++GVA+LGFPLSIHLEATYGVSA AF+TFAEMLAYWSP +
Sbjct 246 EPPQKRQLMVDLYKRVIEGVAELGFPLSIHLEATYGVSAPAFQTFAEMLAYWSPGQ 301
>gi|41408008|ref|NP_960844.1| hypothetical protein MAP1910c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396363|gb|AAS04227.1| hypothetical protein MAP_1910c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=302
Score = 511 bits (1315), Expect = 7e-143, Method: Compositional matrix adjust.
Identities = 241/294 (82%), Positives = 269/294 (92%), Gaps = 0/294 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
VTLNTIALELVPPN + G+ERA+E+A KVV++SA SGLDGRIRHVM+PG+IAEDDDRP+P
Sbjct 6 VTLNTIALELVPPNADEGRERALEEAHKVVRHSAESGLDGRIRHVMIPGIIAEDDDRPVP 65
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWS++KPEL G+ GLCTQVTAFMDE SLH RL +L AGMEG+VFVGVPRT
Sbjct 66 MKPKLDVLDFWSVVKPELPGIKGLCTQVTAFMDEQSLHGRLTELCSAGMEGVVFVGVPRT 125
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR LV NRGVI+IPTRDGEQGR +FKC RGATYGMTQLLYSDA
Sbjct 126 MNDGEGSGVAPTDALSIYRDLVTNRGVILIPTRDGEQGRFSFKCDRGATYGMTQLLYSDA 185
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFAR T+HRPEILLSFGFVPK+E+R+GLINWLIQDPGNAAVA EQ FV+ LA S
Sbjct 186 IVGFLREFARQTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNAAVAREQEFVKTLAAS 245
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSP 294
EPA++RR MVDLYKRV+DGV DLGFPLSIHLEATYG+S AF+TFAEMLAYWSP
Sbjct 246 EPAQKRRQMVDLYKRVIDGVGDLGFPLSIHLEATYGISGPAFQTFAEMLAYWSP 299
>gi|118464132|ref|YP_881526.1| hypothetical protein MAV_2322 [Mycobacterium avium 104]
gi|254774994|ref|ZP_05216510.1| hypothetical protein MaviaA2_10019 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165419|gb|ABK66316.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336461956|gb|EGO40808.1| hypothetical protein MAPs_25640 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=297
Score = 509 bits (1311), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 240/294 (82%), Positives = 269/294 (92%), Gaps = 0/294 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPN + G+ERA+E+A KVV++SA SGLDGRIRHVM+PG+IAEDDDRP+P
Sbjct 1 MTLNTIALELVPPNADEGRERALEEAHKVVRHSAESGLDGRIRHVMIPGIIAEDDDRPVP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWS++KPEL G+ GLCTQVTAFMDE SLH RL +L AGMEG+VFVGVPRT
Sbjct 61 MKPKLDVLDFWSVVKPELPGIKGLCTQVTAFMDEQSLHGRLTELCSAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR LV NRGVI+IPTRDGEQGR +FKC RGATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSIYRDLVTNRGVILIPTRDGEQGRFSFKCDRGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFLREFAR T+HRPEILLSFGFVPK+E+R+GLINWLIQDPGNAAVA EQ FV+ LA S
Sbjct 181 IVGFLREFARQTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNAAVAREQEFVKTLAAS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSP 294
EPA++RR MVDLYKRV+DGV DLGFPLSIHLEATYG+S AF+TFAEMLAYWSP
Sbjct 241 EPAQKRRQMVDLYKRVIDGVGDLGFPLSIHLEATYGISGPAFQTFAEMLAYWSP 294
>gi|254819741|ref|ZP_05224742.1| hypothetical protein MintA_07449 [Mycobacterium intracellulare
ATCC 13950]
Length=298
Score = 509 bits (1311), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 240/298 (81%), Positives = 272/298 (92%), Gaps = 0/298 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPN + G+ERA+E+A KVV++SA +GLDGRIRHVM+PG+IAEDDDRPI
Sbjct 1 MTLNTIALELVPPNADEGRERALEEAHKVVRHSAEAGLDGRIRHVMIPGIIAEDDDRPIQ 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWS++KPEL G+ GLCTQVTAFMDEPSL RL +LS AGMEG+VFVGVPRT
Sbjct 61 MKPKLDVLDFWSVVKPELTGIRGLCTQVTAFMDEPSLRGRLTELSSAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR+LV NRGVI+IPTRDGEQGR NFKC +GATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSIYRELVTNRGVILIPTRDGEQGRFNFKCDQGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFL EFAR T+HRPEILLSFGFVPK+E+R+GLINWLIQDPGNAAVA EQ FV+KLA
Sbjct 181 IVGFLSEFARQTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNAAVAAEQEFVRKLAEC 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPG 298
EP ++R+LMVDLYKRV+DGVADLGFPLSIHLEATYG+S AF+TFAEMLAYWSP + G
Sbjct 241 EPPQKRQLMVDLYKRVIDGVADLGFPLSIHLEATYGISGPAFQTFAEMLAYWSPTQQG 298
>gi|15827421|ref|NP_301684.1| hypothetical protein ML0901 [Mycobacterium leprae TN]
gi|221229898|ref|YP_002503314.1| hypothetical protein MLBr_00901 [Mycobacterium leprae Br4923]
gi|3080486|emb|CAA18681.1| hypothetical protein MLCB268.15c [Mycobacterium leprae]
gi|13092971|emb|CAC31282.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933005|emb|CAR70996.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=304
Score = 509 bits (1310), Expect = 3e-142, Method: Compositional matrix adjust.
Identities = 242/299 (81%), Positives = 274/299 (92%), Gaps = 0/299 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPNL+ G+ERA+EDA KVVQYSA SGL GRIRHVM+PGMI E+DDRPIP
Sbjct 1 MTLNTIALELVPPNLDAGQERAVEDACKVVQYSAESGLSGRIRHVMIPGMIVEEDDRPIP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWSI++PEL GV+GLCTQVTAFMDE SL RRL DLS AGMEG+VFVGVPRT
Sbjct 61 MKPKLDVLDFWSIVRPELPGVNGLCTQVTAFMDEASLGRRLADLSAAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR+LVANRGVIVIPTRDGEQ RLNFKC++GATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSMYRELVANRGVIVIPTRDGEQDRLNFKCNQGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IV FL EFA+ T+HRPE+LLSFGFVPK E R+GLINWLIQD GNAAVADEQ FV++LAGS
Sbjct 181 IVRFLTEFAKHTDHRPELLLSFGFVPKAERRVGLINWLIQDSGNAAVADEQEFVKRLAGS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPGK 299
EPA++R+LM+DLY+RV+DGVA+LGFPLSIH EATYG+S AAF+TFAEM+AYW P G+
Sbjct 241 EPAQKRQLMLDLYQRVIDGVAELGFPLSIHFEATYGMSPAAFDTFAEMVAYWPPVCVGQ 299
>gi|183983197|ref|YP_001851488.1| hypothetical protein MMAR_3207 [Mycobacterium marinum M]
gi|183176523|gb|ACC41633.1| conserved protein [Mycobacterium marinum M]
Length=298
Score = 508 bits (1309), Expect = 4e-142, Method: Compositional matrix adjust.
Identities = 241/298 (81%), Positives = 272/298 (92%), Gaps = 0/298 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TL TIALELVPPN++GGKERA+EDARKVVQYSA GLDGR+RHVM+PGMIAEDDDRP+P
Sbjct 1 MTLRTIALELVPPNVDGGKERALEDARKVVQYSADFGLDGRLRHVMIPGMIAEDDDRPVP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQ KLDVLDFW IIKPE+ G++GLCTQVTAF DE +L RRLVDLSDAGMEG+VFVGVPRT
Sbjct 61 MQQKLDVLDFWQIIKPEMPGINGLCTQVTAFTDEAALRRRLVDLSDAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR L+ NRGVIVIPTRDGEQGRLNFKC++GATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSIYRDLLPNRGVIVIPTRDGEQGRLNFKCNQGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IV FL EFA +T+HRPE+LLSFGF+PKVE+R+GLINWLIQDPGN AVA EQ FV++LA S
Sbjct 181 IVKFLTEFADSTDHRPELLLSFGFIPKVESRVGLINWLIQDPGNPAVAAEQEFVKRLAAS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPG 298
EPA++R+LMVDLYKR++DGV LGFPLSIH EATYGVS AAF+TFAEMLAYW+P G
Sbjct 241 EPAQKRQLMVDLYKRIMDGVVGLGFPLSIHFEATYGVSPAAFQTFAEMLAYWAPDTHG 298
>gi|118618809|ref|YP_907141.1| hypothetical protein MUL_3515 [Mycobacterium ulcerans Agy99]
gi|118570919|gb|ABL05670.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=298
Score = 507 bits (1305), Expect = 1e-141, Method: Compositional matrix adjust.
Identities = 240/298 (81%), Positives = 271/298 (91%), Gaps = 0/298 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TL TIALELVPPN++GGKERA+EDARKVVQYSA GLDGR+RHVM+PGMIAEDDDRP+P
Sbjct 1 MTLRTIALELVPPNVDGGKERALEDARKVVQYSADFGLDGRLRHVMIPGMIAEDDDRPVP 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
MQ KLDVLDFW IIKPE+ G++GLCTQVTAF DE +L RRLVDLSDAGMEG+VFVGVPRT
Sbjct 61 MQQKLDVLDFWQIIKPEMPGINGLCTQVTAFTDEAALRRRLVDLSDAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR L+ NRGVIVIPTRDGEQGRLNFKC++GATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSIYRDLLPNRGVIVIPTRDGEQGRLNFKCNQGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
V FL EFA +T+HRPE+LLSFGF+PKVE+R+GLINWLIQDPGN AVA EQ FV++LA S
Sbjct 181 TVKFLTEFAYSTDHRPELLLSFGFIPKVESRVGLINWLIQDPGNPAVAAEQEFVKRLAAS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPG 298
EPA++R+LMVDLYKR++DGV LGFPLSIH EATYGVS AAF+TFAEMLAYW+P G
Sbjct 241 EPAQKRQLMVDLYKRIMDGVVGLGFPLSIHFEATYGVSPAAFQTFAEMLAYWAPDTHG 298
>gi|342859882|ref|ZP_08716535.1| hypothetical protein MCOL_13423 [Mycobacterium colombiense CECT
3035]
gi|342133014|gb|EGT86234.1| hypothetical protein MCOL_13423 [Mycobacterium colombiense CECT
3035]
Length=297
Score = 497 bits (1279), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 235/298 (79%), Positives = 271/298 (91%), Gaps = 1/298 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNTIALELVPPN + G+ERA+E+A+KVV+ SA +GLDGRIRHVM+PG+IAEDDDRPI
Sbjct 1 MTLNTIALELVPPNADEGRERALEEAQKVVRNSAEAGLDGRIRHVMIPGIIAEDDDRPIQ 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVL+FWS+++PEL G+ GLCTQVTAFMDEPSL RL +L+ AGMEG+VFVGVPRT
Sbjct 61 MKPKLDVLEFWSVVRPELPGIKGLCTQVTAFMDEPSLRTRLTELTSAGMEGVVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAPTDALS+YR+L++NRGVI+IPTRDGEQGR NFKC +GATYGMTQLLYSDA
Sbjct 121 MNDGEGSGVAPTDALSIYRELLSNRGVILIPTRDGEQGRFNFKCDQGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFL EFAR T+HRPEILLSFGFVPK+E+R+GLINWLIQDPGN AVA EQ FV++LA
Sbjct 181 IVGFLTEFARQTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNPAVAAEQEFVKELAAG 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEPG 298
EPA++RR MVDLYKRV+DGVA+LGFPLSIHLEATYG S AF+TFAEMLAYWSP PG
Sbjct 241 EPAQKRRQMVDLYKRVIDGVAELGFPLSIHLEATYGNSGPAFQTFAEMLAYWSPT-PG 297
>gi|120406712|ref|YP_956541.1| hypothetical protein Mvan_5770 [Mycobacterium vanbaalenii PYR-1]
gi|119959530|gb|ABM16535.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=297
Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust.
Identities = 224/297 (76%), Positives = 261/297 (88%), Gaps = 0/297 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
++LNTIALELVPPN+E G+E+A+EDA KV++ SA +GL GRIRHVM+PGMI ED DRPI
Sbjct 1 MSLNTIALELVPPNVERGREQAMEDAEKVLRCSAEAGLAGRIRHVMIPGMIEEDGDRPIE 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFW++I+PEL G+ GLCTQVTAFMDE +L RL +L D+G EGI FVGVPRT
Sbjct 61 MKPKLDVLDFWNMIRPELPGIKGLCTQVTAFMDEATLRGRLTELRDSGFEGIAFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
+ DGEGSGVAPTDALS++ Q+V NRGVI+IPTR+GE GR NFKC RGATYGMTQLLYSDA
Sbjct 121 LSDGEGSGVAPTDALSIFDQVVENRGVILIPTREGEHGRFNFKCDRGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFL+EFA +T+HRPEILLSFGFVPKVE R+GLINWLIQDPGN AVA EQ FV+ L+ +
Sbjct 181 IVGFLKEFAASTDHRPEILLSFGFVPKVENRVGLINWLIQDPGNEAVAREQEFVRTLSDT 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEP 297
+PA RRRLM DLYKRV+DGVADLGFPLS+H E+TYGV+ AAFET AEMLAYWSP +P
Sbjct 241 DPAGRRRLMTDLYKRVIDGVADLGFPLSVHFESTYGVNTAAFETLAEMLAYWSPDKP 297
>gi|315446609|ref|YP_004079488.1| hypothetical protein Mspyr1_51270 [Mycobacterium sp. Spyr1]
gi|315264912|gb|ADU01654.1| hypothetical protein Mspyr1_51270 [Mycobacterium sp. Spyr1]
Length=297
Score = 471 bits (1213), Expect = 4e-131, Method: Compositional matrix adjust.
Identities = 226/297 (77%), Positives = 259/297 (88%), Gaps = 0/297 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
++LNTIALELVPPN+E G+E+A+EDA KV++ SA +GL GRIRHVM+PGMI ED DRPI
Sbjct 1 MSLNTIALELVPPNVERGREQALEDAEKVLRCSAEAGLAGRIRHVMIPGMIEEDGDRPIE 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWS+IKPEL GV GLCTQVTAFMDE +L RL L D+G EGI FVGVPRT
Sbjct 61 MKPKLDVLDFWSMIKPELPGVKGLCTQVTAFMDEETLRGRLALLGDSGFEGIAFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
+ DGEG+GVAPTDALS++ +V NRGVI+IPTR+GE GR NFKC RGATYGMTQLLYSDA
Sbjct 121 LNDGEGTGVAPTDALSIFDGVVENRGVILIPTREGEHGRFNFKCDRGATYGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVG L EFA T+HRPEILLSFGFVPKVE+R+GLINWLIQDPGN AVA EQ FV++LA +
Sbjct 181 IVGMLTEFADKTDHRPEILLSFGFVPKVESRVGLINWLIQDPGNEAVAREQEFVRRLADT 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEP 297
EPA RR+LMVDLYKRV+DGVADLGFPLS+H EATYGV+ AAFET AEMLAYW+P +P
Sbjct 241 EPAARRQLMVDLYKRVIDGVADLGFPLSVHFEATYGVNTAAFETLAEMLAYWAPDKP 297
>gi|145221654|ref|YP_001132332.1| hypothetical protein Mflv_1061 [Mycobacterium gilvum PYR-GCK]
gi|145214140|gb|ABP43544.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=302
Score = 469 bits (1207), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 225/297 (76%), Positives = 258/297 (87%), Gaps = 0/297 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
V+LNTIALELVPPN+E G+E+A+EDA KV++ SA +GL GRIRHVM+PGMI ED DRPI
Sbjct 6 VSLNTIALELVPPNVERGREQALEDAEKVLRCSAEAGLAGRIRHVMIPGMIEEDGDRPIE 65
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLDFWS+IKPEL V GLCTQVTAFMDE +L RL L D+G EGI FVGVPRT
Sbjct 66 MKPKLDVLDFWSMIKPELPDVKGLCTQVTAFMDEETLRGRLALLGDSGFEGIAFVGVPRT 125
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
+ DGEG+GVAPTDALS++ +V NRGVI+IPTR+GE GR NFKC RGATYGMTQLLYSDA
Sbjct 126 LNDGEGTGVAPTDALSIFDGVVENRGVILIPTREGEHGRFNFKCDRGATYGMTQLLYSDA 185
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVG L EFA T+HRPEILLSFGFVPKVE+R+GLINWLIQDPGN AVA EQ FV++LA +
Sbjct 186 IVGMLTEFADKTDHRPEILLSFGFVPKVESRVGLINWLIQDPGNEAVAREQEFVRRLADT 245
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAEP 297
EPA RR++MVDLYKRV+DGVADLGFPLS+H EATYGV+ AAFET AEMLAYW+P +P
Sbjct 246 EPAPRRQMMVDLYKRVIDGVADLGFPLSVHFEATYGVNTAAFETLAEMLAYWAPDKP 302
>gi|108802158|ref|YP_642355.1| hypothetical protein Mmcs_5197 [Mycobacterium sp. MCS]
gi|119871311|ref|YP_941263.1| hypothetical protein Mkms_5285 [Mycobacterium sp. KMS]
gi|126438140|ref|YP_001073831.1| hypothetical protein Mjls_5577 [Mycobacterium sp. JLS]
gi|108772577|gb|ABG11299.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697400|gb|ABL94473.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237940|gb|ABO01341.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=297
Score = 467 bits (1201), Expect = 1e-129, Method: Compositional matrix adjust.
Identities = 222/292 (77%), Positives = 252/292 (87%), Gaps = 0/292 (0%)
Query 3 LNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQ 62
LNT+ALELVPPN++ G+E A+EDA KV++ SA +G++GRI HVM+PGMI ED RPI M+
Sbjct 3 LNTVALELVPPNVDRGREHALEDAHKVLRCSAEAGIEGRIGHVMIPGMIEEDSGRPIEMK 62
Query 63 PKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRTMQ 122
PK+DVLDFW IIKPEL GV GLCTQVTAF+DEP+L +RL +LS AG +GI FVGVPRTM
Sbjct 63 PKMDVLDFWQIIKPELPGVRGLCTQVTAFLDEPALRQRLTELSTAGFDGIAFVGVPRTMN 122
Query 123 DGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDAIV 182
DGEGSGVAPTDALS+Y LV NRG I+IPTRDGEQGR FKC +GATYGMTQLLYSDAIV
Sbjct 123 DGEGSGVAPTDALSIYEGLVDNRGAILIPTRDGEQGRFTFKCKQGATYGMTQLLYSDAIV 182
Query 183 GFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGSEP 242
GFL EFA E RPEILLSFGFVPKVE+R+GLINWLIQDPGNAAVA EQ FV+ LA SEP
Sbjct 183 GFLTEFAANNEFRPEILLSFGFVPKVESRVGLINWLIQDPGNAAVAAEQEFVKSLAASEP 242
Query 243 ARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSP 294
A +RR+++DLYKRV+DGV +LGFPLSIHLEATYGVS AFETFAEML YWSP
Sbjct 243 ADKRRMLLDLYKRVIDGVGELGFPLSIHLEATYGVSTPAFETFAEMLEYWSP 294
>gi|118472782|ref|YP_890808.1| hypothetical protein MSMEG_6596 [Mycobacterium smegmatis str.
MC2 155]
gi|118174069|gb|ABK74965.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=302
Score = 449 bits (1156), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 213/294 (73%), Positives = 246/294 (84%), Gaps = 0/294 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
V LNTIALELVPPN+E G A+E+A KV+ +A +G++GRIRHVM+PGMI EDDDRPI
Sbjct 6 VPLNTIALELVPPNIERGASYAVEEAHKVLAIAAETGIEGRIRHVMIPGMIDEDDDRPIE 65
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PK+DVL++W+II+PEL G+ GLCTQVT+F+ E +L RL LS AG +GI FVGVPRT
Sbjct 66 MKPKMDVLEYWNIIRPELPGLRGLCTQVTSFLGEEALRERLTALSGAGFDGISFVGVPRT 125
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M+DGEG GVAPTDALS+Y LV NRG I+IPTR+GEQGR NFKC +GATYGMTQLLYSDA
Sbjct 126 MKDGEGEGVAPTDALSIYADLVPNRGAILIPTREGEQGRFNFKCDQGATYGMTQLLYSDA 185
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IVGFL EFA+TTEHRPEILLSFGFVPK+E ++GLINWLIQDPGN AVA EQ FV LA
Sbjct 186 IVGFLTEFAKTTEHRPEILLSFGFVPKMEAKVGLINWLIQDPGNPAVAAEQEFVSHLAEQ 245
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSP 294
+PA +RRLMVDLYKRV+DGV LGFPLS+H E YGVS AFET AEML YWSP
Sbjct 246 DPAEKRRLMVDLYKRVIDGVGQLGFPLSVHYEVAYGVSRPAFETLAEMLEYWSP 299
>gi|333990370|ref|YP_004522984.1| hypothetical protein JDM601_1730 [Mycobacterium sp. JDM601]
gi|333486338|gb|AEF35730.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=301
Score = 441 bits (1135), Expect = 5e-122, Method: Compositional matrix adjust.
Identities = 216/299 (73%), Positives = 251/299 (84%), Gaps = 4/299 (1%)
Query 1 VTLNTIALELVPPNLEGG----KERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDD 56
+TLNT+ALELVPPNL+ G E+A EDA KV +++A G++GRIRH++MP MIAEDDD
Sbjct 1 MTLNTVALELVPPNLDRGPEQAHEKACEDADKVRRFAAEVGIEGRIRHILMPAMIAEDDD 60
Query 57 RPIPMQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVG 116
RP+ M+PKLDVLDFW I P L G+ GLCTQVTAF DE +L RL DL+ AG+EG+V+VG
Sbjct 61 RPVEMKPKLDVLDFWKTIGPRLPGMSGLCTQVTAFSDEAALRGRLGDLTGAGIEGVVYVG 120
Query 117 VPRTMQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLL 176
VPRTM DGEGSGV PTDAL+ +R VANRGVI+IPTR E GR +FKC RGAT+G+TQLL
Sbjct 121 VPRTMADGEGSGVPPTDALATFRADVANRGVILIPTRADEIGRFDFKCDRGATFGLTQLL 180
Query 177 YSDAIVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQK 236
YSDAIV FL EFA+ ++ RPEILLSFGFVP E R+GLINWLIQDPGNAAVA EQAFV+
Sbjct 181 YSDAIVPFLTEFAQHSDARPEILLSFGFVPTFENRVGLINWLIQDPGNAAVAAEQAFVRT 240
Query 237 LAGSEPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPA 295
LA SEP +RR+LM+DLYKRV+DGVADLGFPLSIHLEATYGVSAAAF TFA+ML YWSPA
Sbjct 241 LADSEPEQRRKLMLDLYKRVIDGVADLGFPLSIHLEATYGVSAAAFTTFAQMLDYWSPA 299
>gi|169631696|ref|YP_001705345.1| hypothetical protein MAB_4622c [Mycobacterium abscessus ATCC
19977]
gi|169243663|emb|CAM64691.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=295
Score = 423 bits (1087), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 197/293 (68%), Positives = 240/293 (82%), Gaps = 0/293 (0%)
Query 3 LNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQ 62
+NT+ALE+VPPN++GG +RA E+ RK+ Q+SA G+D RI HVM+P MI ED DRP+ M+
Sbjct 1 MNTVALEMVPPNVDGGLDRAAEELRKLRQFSAEFGIDRRIAHVMIPSMIVEDGDRPLEMK 60
Query 63 PKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRTMQ 122
PKLDV+D+WSII+ EL V GLCTQVT+F DE SL RL DL+D GM+G++FVGVPRTM
Sbjct 61 PKLDVVDYWSIIRAELPAVRGLCTQVTSFSDETSLRGRLTDLTDVGMDGVIFVGVPRTMN 120
Query 123 DGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDAIV 182
DG+G+G+ PTDALS + +V NRG I+IPTR GEQGR +FKC +GA + MTQLLYSDA+V
Sbjct 121 DGDGAGIPPTDALSKFDDIVQNRGAILIPTRAGEQGRFSFKCDKGANFAMTQLLYSDAVV 180
Query 183 GFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGSEP 242
GFL EFA T++HRPE+LLSFGFVPK+E++IGLI+WLIQDPGN AVA EQ FV+ LA EP
Sbjct 181 GFLHEFAHTSDHRPEVLLSFGFVPKLESKIGLIDWLIQDPGNEAVAREQDFVKALAAREP 240
Query 243 ARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPA 295
RR +VDLYKRV+DGV LGFPLSIH EA YG++ AFETFAEML YWSPA
Sbjct 241 GERRPQLVDLYKRVVDGVGGLGFPLSIHFEAPYGLARPAFETFAEMLEYWSPA 293
>gi|324997260|ref|ZP_08118372.1| hypothetical protein PseP1_00784 [Pseudonocardia sp. P1]
Length=300
Score = 417 bits (1072), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 196/294 (67%), Positives = 241/294 (82%), Gaps = 0/294 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+ L TIA ELV PN++ G++RA+E+A KV+++S A G+ RI H+++PGMI EDDDRP+
Sbjct 1 MALETIAFELVAPNVDLGRQRAVEEAGKVLEHSTACGIQDRIGHILIPGMIEEDDDRPVA 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PK+DVLDFWS I PEL V GLCTQVT+FM EP L +RL L AG+EGIVFVGVPRT
Sbjct 61 MKPKMDVLDFWSTISPELPNVRGLCTQVTSFMAEPQLTQRLSALRGAGIEGIVFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEGSGVAP+DAL+ Y LV RGV+VIPTRDGE GRLNFKC++GAT+G+TQLLYSD
Sbjct 121 MNDGEGSGVAPSDALATYTDLVPERGVVVIPTRDGEVGRLNFKCNQGATFGLTQLLYSDR 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IV FLR+FA + +RPE+LLSFGFVP+VE R+ LINWLIQDPGN VA+EQAFV KLA
Sbjct 181 IVEFLRDFAAQSPYRPELLLSFGFVPQVENRVNLINWLIQDPGNPLVAEEQAFVTKLADG 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSP 294
EPA + ++++LYKRV+DGV +LGFP+S+HLEA YG SA AF+TFA ML YW+P
Sbjct 241 EPAEKHTMLLELYKRVVDGVLELGFPVSLHLEAPYGASAPAFDTFAAMLDYWAP 294
>gi|118470282|ref|YP_890858.1| hypothetical protein MSMEG_6649 [Mycobacterium smegmatis str.
MC2 155]
gi|118171569|gb|ABK72465.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=296
Score = 414 bits (1063), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 197/294 (68%), Positives = 236/294 (81%), Gaps = 0/294 (0%)
Query 1 VTLNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIP 60
+TLNT+ALELVP NL+ G A+ + +KV + + +GLDGRIRH+M+PGMI EDD RP+
Sbjct 1 MTLNTVALELVPSNLDLGTAHALAELQKVRKLAVDAGLDGRIRHIMIPGMIEEDDGRPVE 60
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
M+PKLDVLD+W +++ EL V GLCTQVT+F+ E SL RRL L G EGI FVGVPRT
Sbjct 61 MKPKLDVLDYWELVQRELPDVRGLCTQVTSFLGERSLRRRLTALIQHGFEGIAFVGVPRT 120
Query 121 MQDGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDA 180
M DGEG+GVAPTDALS + LV +RGVI+IPTRD E R FKC GAT+GMTQLLYSDA
Sbjct 121 MTDGEGAGVAPTDALSTFSHLVKHRGVILIPTRDDELSRFGFKCKEGATFGMTQLLYSDA 180
Query 181 IVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGS 240
IV FL EF+R T+HRPEILLSFGFVPK+E+ +GLI+WLIQDP N AVA EQ FV++LA S
Sbjct 181 IVNFLTEFSRNTDHRPEILLSFGFVPKMESEVGLIDWLIQDPDNGAVATEQQFVRRLAAS 240
Query 241 EPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSP 294
EPA++R M+DLYKRV+DGV DLGFP+S+H EA YGVSA AFETFA ML YW+P
Sbjct 241 EPAQKRAQMLDLYKRVIDGVIDLGFPVSLHFEAPYGVSAPAFETFAAMLDYWAP 294
>gi|134100431|ref|YP_001106092.1| hypothetical protein SACE_3896 [Saccharopolyspora erythraea NRRL
2338]
gi|291007315|ref|ZP_06565288.1| hypothetical protein SeryN2_22562 [Saccharopolyspora erythraea
NRRL 2338]
gi|133913054|emb|CAM03167.1| hypothetical protein SACE_3896 [Saccharopolyspora erythraea NRRL
2338]
Length=295
Score = 401 bits (1030), Expect = 8e-110, Method: Compositional matrix adjust.
Identities = 191/293 (66%), Positives = 232/293 (80%), Gaps = 0/293 (0%)
Query 3 LNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQ 62
+NTIALELVPP+L+GG+++A+ + RK+ + S +SGL GRIRHVM+PG+I ED DRP+ +
Sbjct 1 MNTIALELVPPDLDGGEQKAVAEGRKIAELSRSSGLAGRIRHVMIPGIIQEDGDRPVDFR 60
Query 63 PKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRTMQ 122
PK+D +DFW I+PEL G+ LCTQVTAF DE L RL DL A M+GI FVGVPR M
Sbjct 61 PKMDTIDFWRAIQPELDGMRALCTQVTAFHDEQKLGERLQDLRKADMDGIAFVGVPRNMT 120
Query 123 DGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDAIV 182
DGEG GVAPTDAL+ Y+ +V +RG I+IPTR+GEQGR FKC RGATYGMTQLLYSDAIV
Sbjct 121 DGEGPGVAPTDALTKYQDVVPHRGSILIPTREGEQGRFGFKCERGATYGMTQLLYSDAIV 180
Query 183 GFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGSEP 242
FLREFA+TT HRPEILLSFGFVP VE++ LI WLIQDPGN +VA EQ FV + A
Sbjct 181 EFLREFAKTTPHRPEILLSFGFVPGVESKKKLIQWLIQDPGNESVAKEQEFVARTAELGF 240
Query 243 ARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPA 295
+R++ +VDLYKRV+DGV LGFPLS+HLEA YG + AFETFA ML +W+P+
Sbjct 241 EQRKQAVVDLYKRVIDGVHGLGFPLSVHLEAPYGYNEPAFETFAAMLEHWAPS 293
>gi|325675064|ref|ZP_08154750.1| hypothetical protein HMPREF0724_12532 [Rhodococcus equi ATCC
33707]
gi|325554025|gb|EGD23701.1| hypothetical protein HMPREF0724_12532 [Rhodococcus equi ATCC
33707]
Length=298
Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/294 (55%), Positives = 204/294 (70%), Gaps = 3/294 (1%)
Query 3 LNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQ 62
L T+ALEL PP A + GL R+ HV++PG+I ED RP+P+
Sbjct 4 LGTVALELAPPERTASAVEAARAVAERCH---EHGLLERLGHVLVPGIIPEDGARPVPLT 60
Query 63 PKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRTMQ 122
P++D+LD W+ ++P LA V GLCTQVT F EP+L R+ L AGM+G+VFVG P
Sbjct 61 PRMDILDVWTALRPALAPVSGLCTQVTVFETEPALAERVRKLLGAGMDGVVFVGKPHGSP 120
Query 123 DGEGSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDAIV 182
+ G P +AL+ +R VA+RGV+++PTR GE R KC+ GAT+ +TQ+LYSD IV
Sbjct 121 VADTPGPTPQEALTRFRGQVAHRGVVLMPTRRGELDRFETKCAHGATFALTQMLYSDRIV 180
Query 183 GFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGSEP 242
GFLR FA +EHRPEILLSFGFVP VETR+GLI+WL+ D GNA VA EQAFV +LA P
Sbjct 181 GFLRAFAARSEHRPEILLSFGFVPGVETRVGLIDWLLHDDGNADVAPEQAFVARLAARSP 240
Query 243 ARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAE 296
RRR +VDLY+R+LDGV DLGFPLS+HLEA YG+S +A ETF+ +L +WSP +
Sbjct 241 QRRRTDLVDLYRRILDGVGDLGFPLSVHLEAPYGLSDSACETFSALLDHWSPLQ 294
>gi|312137776|ref|YP_004005112.1| hypothetical protein REQ_02820 [Rhodococcus equi 103S]
gi|311887115|emb|CBH46424.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=292
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/291 (54%), Positives = 200/291 (69%), Gaps = 3/291 (1%)
Query 6 IALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQPKL 65
+ALEL PP A + GL R+ HV++PG+I ED RP+P+ P++
Sbjct 1 MALELAPPERTASAVEAARAVAERCH---EHGLLERLGHVLVPGIIPEDGARPVPLTPRM 57
Query 66 DVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRTMQDGE 125
D+LD W+ ++P LA V GLCTQVT F E +L R+ L AGM+G+VFVG P +
Sbjct 58 DILDVWTALRPALAPVSGLCTQVTVFETESALADRVRKLVGAGMDGVVFVGKPHGSPVAD 117
Query 126 GSGVAPTDALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGATYGMTQLLYSDAIVGFL 185
G P +AL+ +R VA+RGV+++PTR GE R KC+ GAT+ +TQ+LYSD IVGFL
Sbjct 118 TPGPTPQEALTRFRGQVAHRGVVLMPTRRGELDRFETKCAHGATFALTQMLYSDRIVGFL 177
Query 186 REFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAGSEPARR 245
R FA +EHRPEILLSFGFVP VETR+ LI+WL+ D GNA VA EQAFV +LA P RR
Sbjct 178 RAFAARSEHRPEILLSFGFVPGVETRVRLIDWLLHDDGNADVAPEQAFVARLAARSPQRR 237
Query 246 RRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEMLAYWSPAE 296
R +VDLY+R+LDGV DLGFPLS+HLEA YG+S +A ETF+ +L +WSP +
Sbjct 238 RTDLVDLYRRILDGVGDLGFPLSVHLEAPYGLSDSACETFSALLDHWSPLQ 288
>gi|303287935|ref|XP_003063256.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455088|gb|EEH52392.1| predicted protein [Micromonas pusilla CCMP1545]
Length=285
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/274 (23%), Positives = 117/274 (43%), Gaps = 22/274 (8%)
Query 10 LVPPNLEGGKERAI-EDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQPKLDVL 68
L PP L+G + A+ E ARK V+ SA DG I + + P + RP P + D
Sbjct 2 LTPP-LDGATDEALRETARKFVERSATLATDGFIVYDIQPEEGRTPEPRPFPFRKLDDPA 60
Query 69 DFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRL-VDLSDAGMEGIVFVGVPRTMQDGEGS 127
F S++K +++G + + A D+ + L + + G+ VG + G
Sbjct 61 HFASVLK-DVSGKESVVYKCVAESDKGGFDKWLKASIDEHGVHAYNLVGGASSANQYSGP 119
Query 128 GVAPTDALSLYRQLVANRGVIVIP---TRDGEQGRLNFKCSRGATYGMTQLLYS-DAIVG 183
+ + R+ A+ GV + + E L K G + ++Q +Y + ++
Sbjct 120 TIPEVAKMLNARKECAHGGVTIAERHIKKGNEHETLVRKAGLGMRWFISQAIYDPEPMIK 179
Query 184 FLREF---ARTTEHRPE-ILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFVQKLAG 239
L+E+ R + P+ ++L+F + +T + I WL V +E + G
Sbjct 180 LLKEYGALCREKKIEPKRVVLTFAPCGREKT-MRFIKWL-----GVTVPEEILEAENKVG 233
Query 240 SEPARRRRLMVDLYKRVLDGVADLGFPLSIHLEA 273
+ L+ + KR+L+ G PL + +E+
Sbjct 234 ----KSVDLLCAMCKRILEETKGCGVPLGVSVES 263
>gi|255089244|ref|XP_002506544.1| predicted protein [Micromonas sp. RCC299]
gi|226521816|gb|ACO67802.1| predicted protein [Micromonas sp. RCC299]
Length=417
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/276 (24%), Positives = 115/276 (42%), Gaps = 22/276 (7%)
Query 10 LVPPNLEGGKERAI-EDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQPKLDVL 68
L PP LEG + + E ARK V+ SA DG I + + + RP P + KLD
Sbjct 21 LTPP-LEGATQDELKETARKFVERSATLATDGFIVYDIQEEKGRTPEPRPFPFR-KLDDP 78
Query 69 DFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVD-LSDAGMEGIVFVGVPRTMQDGEGS 127
++ + +++G + + A D L + D G+ VG + G
Sbjct 79 SHFAKVLKDVSGKESVVYKCVAESDPGGFDGWLNKAIDDYGVNAYNLVGGASSANQYSGP 138
Query 128 GVAPTDALSLYRQLVANRGVIVIPTRDGEQGR----LNFKCSRGATYGMTQLLYS-DAIV 182
+ P A L ++ G + I R ++G L K G + ++Q +Y + ++
Sbjct 139 TI-PDVAAKLNKRKQCAHGGVTIAERHVKKGNEHETLVKKGELGMRWFISQAIYDPEPMI 197
Query 183 GFLREFARTTEHR----PEILLSFGFVPKVETRIGLINWL-IQDPGNAAVADEQAFVQKL 237
L+E+ R ++L+F + +T + I WL + P N E+ +
Sbjct 198 KLLKEYGALCRQRNIEPKRVVLTFAPCGREKT-MRFIKWLGVTVPENV----EREILD-- 250
Query 238 AGSEPARRRRLMVDLYKRVLDGVADLGFPLSIHLEA 273
A + + L+ + K++LD G PL I +E+
Sbjct 251 AEDKVGKSVDLLCAMCKKILDETKGCGVPLGISVES 286
>gi|297621946|ref|YP_003710083.1| hypothetical protein wcw_1736 [Waddlia chondrophila WSU 86-1044]
gi|297377247|gb|ADI39077.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337294205|emb|CCB92189.1| putative uncharacterized protein [Waddlia chondrophila 2032/99]
Length=294
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/230 (22%), Positives = 100/230 (44%), Gaps = 26/230 (11%)
Query 3 LNTIALELVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAE--DDDRPIP 60
++ + E +PP ++ E+ E +++ + +IR + +P ++ E + +R +P
Sbjct 1 MDKLFYEAIPPPIKWKAEQVEEWTSELLIFLKKE----KIRSINIPEVVGESKEQERTVP 56
Query 61 MQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRT 120
+ K++ LDF ++ + + +T E L + + G+ ++ VG
Sbjct 57 LIAKIETLDFIDRLQNHSFPITPIPNLITVHRSEIQLIEWVENAYRKGVRHLILVG---- 112
Query 121 MQDGEGSGVA-PTDALSLYRQLVANR------GVIVIPTRDGEQGRLNFKCSRGATYGMT 173
GE S ++ P ++ +L+ NR G I I TR E R+ K G + ++
Sbjct 113 ---GEKSSISYPGLQVTTAARLLRNRFPDLKLGGISIFTRKNEPDRILRKMESGIEFFIS 169
Query 174 QLLYSDA-IVGFLREFARTTEHR----PEILLSFGFVPKVETRIGLINWL 218
Q++Y A + L A+ + P + LS K+ T I + WL
Sbjct 170 QIIYETANMKCVLLNLAKLCQAAKLPLPRVYLSLAPAAKL-TDIAFLQWL 218
>gi|325285671|ref|YP_004261461.1| gliding motility-associated protein GldL [Cellulophaga lytica
DSM 7489]
gi|324321125|gb|ADY28590.1| gliding motility-associated protein GldL [Cellulophaga lytica
DSM 7489]
Length=217
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/89 (32%), Positives = 51/89 (58%), Gaps = 12/89 (13%)
Query 60 PMQPKLDVLDFWSIIKPELAGVHGLCTQVTAFMD----EPSLHRRLVD-LSDAGMEGIVF 114
P++ +LD WS++ PELAG G + ++ E SL ++L D L +AG++ +
Sbjct 62 PIEDELD----WSLVYPELAGGEGSAKKKNEALEVKETEASLSKKLDDMLKEAGVDAELM 117
Query 115 VGVPRTMQDGEGS--GVAPT-DALSLYRQ 140
+ ++++ EG+ G+APT DA+ R+
Sbjct 118 GSLGNSIKNFEGAAKGIAPTVDAMESTRK 146
>gi|296272942|ref|YP_003655573.1| hypothetical protein Arnit_1408 [Arcobacter nitrofigilis DSM
7299]
gi|296097116|gb|ADG93066.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
Length=306
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 63/290 (22%), Positives = 119/290 (42%), Gaps = 21/290 (7%)
Query 10 LVPPNLEGGKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIAEDDDRPIPMQPKLDVLD 69
+ PP ++ +E A+K ++ + +DG + + + D+ RP P LD +
Sbjct 18 ITPPKIKHTEEEIKVIAQKHIERISKLPIDGLVLYDIQDESDRTDEKRPFPFIKTLDPCE 77
Query 70 FWSIIKPELAGVHGLCTQVTAFMDEPSLHRRLVDLSDAGMEGIVFVGVPRTMQDGEGSGV 129
+ +L + + + DE S L +L+ VFVG Q +
Sbjct 78 YSRTYLNDLV-IPRVVYRAVGNYDEKSFPIWL-ELTKENQVHSVFVGAASREQ---KKPM 132
Query 130 APTDALSLYRQLVAN--RGVIVIPTR----DGEQGRLNFKCSRGATYGMTQLLYS-DAIV 182
+A L +++ N G I IP R E R+ K Y +TQ +Y+ +A
Sbjct 133 TLKEAYRLKKEVNDNLCMGGIAIPERHMVKHDEHLRVFSKIDNSCEYFITQCVYNLEASK 192
Query 183 GFLREFAR-TTEHRPEIL-LSFGFVPKVETR-IGLINWLIQDPGNAAVADEQAFVQKLAG 239
FL ++A+ E++ E++ + F P + + + WL N D +A +G
Sbjct 193 IFLTDYAKYAKENKKEVVPIIFTLTPCGSAKTLDFMKWLGISIPNYLEEDLKA-----SG 247
Query 240 SEPARRRRLMVDLYKRVLDGVADLGFPLSIHLEATYGVSAAAFETFAEML 289
+ +L VD+++ + D G P+ ++E+ + E E+L
Sbjct 248 NILHDSMKLCVDIFRELYTFGRDRGIPIGCNVESV-AIRKEEIEASIELL 296
>gi|75675114|ref|YP_317535.1| homospermidine synthase [Nitrobacter winogradskyi Nb-255]
gi|74419984|gb|ABA04183.1| homospermidine synthase [Nitrobacter winogradskyi Nb-255]
Length=478
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/91 (30%), Positives = 43/91 (48%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R+V Y A+GL ++ ++ GM+ E+ + I ++D I +
Sbjct 380 GSQLSIEETRRVAPYQNATGL--QVSSAVLAGMVWALENPEAGIVEADEMDFRRCLEIQR 437
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 438 PYLGPVKGYYTDWTPLTDRPGLFPEDIDTSD 468
>gi|85715884|ref|ZP_01046862.1| homospermidine synthase [Nitrobacter sp. Nb-311A]
gi|85697291|gb|EAQ35171.1| homospermidine synthase [Nitrobacter sp. Nb-311A]
Length=478
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/91 (29%), Positives = 43/91 (48%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R+V Y A+G+ ++ ++ GM+ E+ + I ++D I +
Sbjct 380 GSQLSIEETRRVAPYQNATGM--QVSSAVLAGMVWALENPEAGIVEADEMDFRRCLEIQR 437
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 438 PYLGPVKGFYTDWTPLSDRPGLFPEDIDTSD 468
>gi|192289361|ref|YP_001989966.1| Homospermidine synthase [Rhodopseudomonas palustris TIE-1]
gi|192283110|gb|ACE99490.1| Homospermidine synthase [Rhodopseudomonas palustris TIE-1]
Length=476
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 43/91 (48%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R++ Y A+G+ ++ ++ GM+ E+ + I ++D + K
Sbjct 378 GSQLSIEETREICPYQNATGM--QVSSAVLAGMVWALENPEAGIVEADEMDFRRCLEVQK 435
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 436 PYLGPVKGYYTDWTPLTDRPGLFPEDIDTSD 466
>gi|299132176|ref|ZP_07025371.1| Homospermidine synthase [Afipia sp. 1NLS2]
gi|298592313|gb|EFI52513.1| Homospermidine synthase [Afipia sp. 1NLS2]
Length=481
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/91 (30%), Positives = 42/91 (47%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ RK+ Y A+GL ++ ++ GM+ E+ + I ++D I
Sbjct 383 GSQLSIEETRKLAPYQNATGL--QVTSALVAGMVWALENPNEGIVETDEMDFDRLLEIQM 440
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 441 PYLGPVKGYYTDWTPLKDRPGLFPEDIDTSD 471
>gi|39933942|ref|NP_946218.1| homospermidine synthase [Rhodopseudomonas palustris CGA009]
gi|39647789|emb|CAE26309.1| homospermidine synthase [Rhodopseudomonas palustris CGA009]
Length=476
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 43/91 (48%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R++ Y A+G+ ++ ++ GM+ E+ + I ++D + K
Sbjct 378 GSQLSIEETREICPYQNATGM--QVSSAVLAGMVWALENPEAGIVEADEMDFRRCLEVQK 435
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 436 PYLGPVKGYYTDWTPLTDRPGLFPEDIDSSD 466
>gi|316932409|ref|YP_004107391.1| homospermidine synthase [Rhodopseudomonas palustris DX-1]
gi|315600123|gb|ADU42658.1| Homospermidine synthase [Rhodopseudomonas palustris DX-1]
Length=476
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/91 (29%), Positives = 42/91 (47%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ RKV Y A+G+ ++ ++ GM+ E+ + I ++D +
Sbjct 378 GSQLSIEETRKVCPYQNATGM--QVSSAVLAGMVWALENPEAGIVEADEMDFRRCLEVQM 435
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 436 PYLGPVKGYYTDWTPLTDRPGLFPEDIDTSD 466
>gi|27382873|ref|NP_774402.1| homospermidine synthase [Bradyrhizobium japonicum USDA 110]
gi|27356046|dbj|BAC53027.1| homospermidine synthase [Bradyrhizobium japonicum USDA 110]
Length=480
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/91 (30%), Positives = 42/91 (47%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ RK+ Y A+GL ++ ++ GM+ E+ + I ++D I
Sbjct 382 GSQLSIEETRKLAPYQNATGL--QVTSAVLGGMVWALENPNEGIVEADEMDFDRLLEIQL 439
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 440 PYLGPVKGFYTDWTPLTDRPGLFPEDIDTSD 470
>gi|338973185|ref|ZP_08628553.1| homospermidine synthase(HSS) [Bradyrhizobiaceae bacterium SG-6C]
gi|338233644|gb|EGP08766.1| homospermidine synthase(HSS) [Bradyrhizobiaceae bacterium SG-6C]
Length=479
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/91 (30%), Positives = 42/91 (47%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ RK+ Y A+GL ++ ++ GM+ E+ + I ++D I
Sbjct 381 GSQLSIEETRKLAPYQNATGL--QVTSAVLGGMVWALENPNEGIVEADEMDFDRLLEIQM 438
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 439 PYLGPVKGYYTDWTPLTDRPGLFPEDIDTSD 469
>gi|325279207|ref|YP_004251749.1| TonB-dependent receptor plug [Odoribacter splanchnicus DSM 20712]
gi|324311016|gb|ADY31569.1| TonB-dependent receptor plug [Odoribacter splanchnicus DSM 20712]
Length=1103
Score = 36.6 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 36/136 (27%), Positives = 57/136 (42%), Gaps = 20/136 (14%)
Query 121 MQDGEGSGVAPTD-----------ALSLYRQLVANRGVIVIPTRDGEQGRLNFKCSRGAT 169
+Q+ GV P D A ++Y AN GVIVI T+ G QG+L S G
Sbjct 212 LQNTSIGGVNPADIESITILKDAAATAIYGAKAAN-GVIVITTKKGRQGKLRVNFSGGVF 270
Query 170 Y------GMTQLLYSDAIVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPG 223
Y G L+ S V F E + + +G V ++ ++ G ++ L ++
Sbjct 271 YTLKPDLGKLNLMNSSEKVDF--ELGLASRSDLDYRSDYGEVSRLLSKYGQLDALRENGF 328
Query 224 NAAVADEQAFVQKLAG 239
N ++ Q + L G
Sbjct 329 NGISSEAQGAIDALRG 344
>gi|241664246|ref|YP_002982606.1| hypothetical protein Rpic12D_2663 [Ralstonia pickettii 12D]
gi|240866273|gb|ACS63934.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length=391
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/137 (29%), Positives = 57/137 (42%), Gaps = 25/137 (18%)
Query 51 IAEDDDRPIPMQPKLDVLDFWSIIKPELAGV-----HGLCTQVTAFMDEPSLHRRLVDLS 105
I ED R I + +++DF +++KP + GL VT PS HR VDL+
Sbjct 133 IGEDKGRRIH---RREIIDFAALLKPHVRSTTSGLRRGLSVVVTVPDRLPSSHREKVDLA 189
Query 106 DAGMEGIVFVGVPRTMQDG--------------EGSGVAPTDALSLYRQL--VANRGVIV 149
A + I+F G + DG GS P++ + + NR IV
Sbjct 190 KA-LGHIIFAGSTGDLADGTSVRMTEFDVAQAVTGSQPDPSELRATVDAISGTNNRSAIV 248
Query 150 IPTRDGEQGRLNFKCSR 166
I TR+G L + R
Sbjct 249 IGTREGGMLTLTIQSRR 265
>gi|91975330|ref|YP_567989.1| homospermidine synthase [Rhodopseudomonas palustris BisB5]
gi|91681786|gb|ABE38088.1| Homospermidine synthase [Rhodopseudomonas palustris BisB5]
Length=475
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 43/91 (48%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R++ Y A+GL ++ ++ GM+ E+ + I ++D + +
Sbjct 377 GSQLSIEETRRIAPYQNATGL--QVSSAVIAGMVWALENPEAGIVEADEMDYKRCLEVQR 434
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D SD
Sbjct 435 PYLGPVKGYYTDWTPLSDRPGLFPEDIDTSD 465
>gi|170751426|ref|YP_001757686.1| homospermidine synthase [Methylobacterium radiotolerans JCM 2831]
gi|170657948|gb|ACB27003.1| Homospermidine synthase [Methylobacterium radiotolerans JCM 2831]
Length=481
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/91 (29%), Positives = 43/91 (48%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R+V Y A+GL ++ ++ GM+ E+ + I ++D +
Sbjct 382 GSQLSIEETRRVAPYQNATGL--QVTSAVLAGMVWALENPEAGIVEADEMDFRRCLEVQT 439
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G+ T T D P L +D SD
Sbjct 440 PYLGPVVGVYTDWTPLTDRPGLFPEDIDTSD 470
>gi|90426305|ref|YP_534675.1| homospermidine synthase [Rhodopseudomonas palustris BisB18]
gi|90108319|gb|ABD90356.1| Homospermidine synthase [Rhodopseudomonas palustris BisB18]
Length=478
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 42/91 (47%), Gaps = 4/91 (4%)
Query 18 GKERAIEDARKVVQYSAASGLDGRIRHVMMPGMIA--EDDDRPIPMQPKLDVLDFWSIIK 75
G + +IE+ R+V Y A+G+ ++ ++ GM+ E+ + I +LD +
Sbjct 380 GSQLSIEETREVCPYQNATGM--QVSSAVLAGMVWALENPNAGIVEADELDFRRCLEVQT 437
Query 76 PELAGVHGLCTQVTAFMDEPSLHRRLVDLSD 106
P L V G T T D P L +D +D
Sbjct 438 PYLGPVKGFYTDWTPLSDRPGLFPEDIDATD 468
>gi|322696629|gb|EFY88418.1| C6 transcription factor, putative [Metarhizium acridum CQMa 102]
Length=746
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/88 (33%), Positives = 40/88 (46%), Gaps = 10/88 (11%)
Query 175 LLYSDAIVGFLREFARTTEHRPEILLSFGFVPKVETRIGLINWLIQDPGNAAVADEQAFV 234
L Y D I+ EF R+ E P L+ ++ GL NW+IQ GN A + +
Sbjct 371 LRYHDTIIPACAEFQRSIEPMPAGPLT------MDEFFGLPNWIIQLLGNVAALESWKRI 424
Query 235 QKLAGS----EPARRRRLMVDLYKRVLD 258
QK GS E R +++ D K LD
Sbjct 425 QKQMGSLSADELVSRGKVLSDGIKTGLD 452
Lambda K H
0.321 0.139 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 502678578132
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40