BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2173 Length=352 Score E Sequences producing significant alignments: (Bits) Value gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthe... 694 0.0 gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate syn... 692 0.0 gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate syn... 692 0.0 gi|340627179|ref|YP_004745631.1| putative geranylgeranyl pyropho... 690 0.0 gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate syn... 519 3e-145 gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacte... 486 2e-135 gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacteri... 481 5e-134 gi|342859883|ref|ZP_08716536.1| polyprenyl synthetase [Mycobacte... 481 7e-134 gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate sy... 481 8e-134 gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp.... 477 1e-132 gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synth... 473 3e-131 gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacteri... 453 2e-125 gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobact... 453 2e-125 gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacte... 442 3e-122 gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacteri... 434 1e-119 gi|333990369|ref|YP_004522983.1| geranylgeranyl pyrophosphate sy... 422 5e-116 gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacteri... 400 1e-109 gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobact... 335 5e-90 gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synth... 302 5e-80 gi|333918978|ref|YP_004492559.1| putative geranylgeranyl pyropho... 300 2e-79 gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate syn... 298 1e-78 gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actin... 297 2e-78 gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase... 296 3e-78 gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocar... 296 4e-78 gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate sy... 295 9e-78 gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate sy... 286 4e-75 gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate syn... 285 9e-75 gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate sy... 284 1e-74 gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococc... 283 4e-74 gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomy... 283 4e-74 gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcu... 282 6e-74 gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosy... 281 1e-73 gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebac... 280 2e-73 gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate syn... 280 4e-73 gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebac... 279 4e-73 gi|302206535|gb|ADL10877.1| Geranylgeranyl pyrophosphate synthas... 279 4e-73 gi|337291135|ref|YP_004630156.1| Geranylgeranyl pyrophosphate sy... 279 6e-73 gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate sy... 279 6e-73 gi|334697246|gb|AEG82043.1| Geranylgeranyl pyrophosphate synthas... 279 6e-73 gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebac... 278 7e-73 gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebac... 278 8e-73 gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia... 277 2e-72 gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate syn... 274 2e-71 gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebac... 273 4e-71 gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate sy... 271 8e-71 gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophospha... 265 1e-68 gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate syntha... 264 2e-68 gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate syntha... 264 2e-68 gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate syn... 263 3e-68 gi|344044842|gb|EGV40517.1| hypothetical protein CgS9114_08036 [... 263 3e-68 >gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis H37Rv] gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=352 Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 +AGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR Sbjct 1 MAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG Sbjct 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA Sbjct 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG Sbjct 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR Sbjct 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA Sbjct 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 >gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] gi|339632202|ref|YP_004723844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium africanum GM041182] gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] gi|339331558|emb|CCC27254.1| putative geranylgeranyl pyrophosphate synthetase IDSA2 (GGPPSASE) [Mycobacterium africanum GM041182] Length=352 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/352 (99%), Positives = 351/352 (99%), Gaps = 0/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 +AGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR Sbjct 1 MAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG Sbjct 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA Sbjct 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG Sbjct 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDP VTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR Sbjct 241 VFGDPTVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA Sbjct 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 >gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=352 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/352 (99%), Positives = 351/352 (99%), Gaps = 0/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 +AGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWH VASR Sbjct 1 MAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHTVASR 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG Sbjct 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA Sbjct 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG Sbjct 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR Sbjct 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA Sbjct 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 >gi|340627179|ref|YP_004745631.1| putative geranylgeranyl pyrophosphate synthetase IDSA2 [Mycobacterium canettii CIPT 140010059] gi|340005369|emb|CCC44527.1| putative geranylgeranyl pyrophosphate synthetase IDSA2 (GGPPSASE) (GGPP synthetase) (geranylgeranyl diphosphate synthase) [Mycobacterium canettii CIPT 140010059] Length=352 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/352 (99%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 +AGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR Sbjct 1 MAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG Sbjct 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +SAAILLGDLAQVWADDIVS+VCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA Sbjct 121 ISAAILLGDLAQVWADDIVSEVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG Sbjct 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR Sbjct 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA Sbjct 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 >gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium kansasii ATCC 12478] Length=352 Score = 519 bits (1336), Expect = 3e-145, Method: Compositional matrix adjust. Identities = 271/352 (77%), Positives = 300/352 (86%), Gaps = 0/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GAITDQLRRYLH RRR AA++GSDYD L A LEDF L GGKRLRP+FAYWGWHAV + Sbjct 1 MGGAITDQLRRYLHDRRREAAYIGSDYDALTAWLEDFALRGGKRLRPVFAYWGWHAVTTE 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EP P++L LFSALELLHAWAL+HDD+ID S+TRRGRPTA + +AALHR+R+W G QFG Sbjct 61 EPGPEILQLFSALELLHAWALIHDDVIDASSTRRGRPTAHVHFAALHRERNWLGPAHQFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +SAAILLGD+AQ WADDIVS+V Q++L PDA RRV RVW+ IR EVLGGQYLDIVAEASA Sbjct 121 ISAAILLGDVAQAWADDIVSEVGQTSLPPDAARRVRRVWSGIRTEVLGGQYLDIVAEASA 180 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 A SI SAM VAT KTACYTVSRPLQLG AAAADR DVAA F FG DLGVAFQLRDDVLG Sbjct 181 ASSIASAMTVATFKTACYTVSRPLQLGVAAAADRPDVAAAFHQFGTDLGVAFQLRDDVLG 240 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEA ELA++SDP AA LLR+SIGT LTD QVRELR Sbjct 241 VFGDPAVTGKPSGDDLRSGKRTVLIAEAAELAEKSDPRAASLLRSSIGTELTDTQVRELR 300 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VI VG AAAE+RI LT+RALATLASAPINA AKAGLS+LA A +RSA Sbjct 301 EVIAGVGGLAAAENRITELTERALATLASAPINARAKAGLSQLARTATDRSA 352 >gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950] Length=349 Score = 486 bits (1252), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 271/352 (77%), Positives = 297/352 (85%), Gaps = 3/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GAIT+QLRRYL RR A++G+DY+GLIA LEDFVLGGGKRLRP FAYWGW AVA+ Sbjct 1 MTGAITEQLRRYLDERRAETAYIGNDYNGLIAALEDFVLGGGKRLRPAFAYWGWRAVATD 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EPD VLLLFSALELLHA ALVHDD+ID S+TRRGRPT +++A LHRDR W+GSP++FG Sbjct 61 EPDEQVLLLFSALELLHACALVHDDVIDDSSTRRGRPTTHVQFATLHRDRGWQGSPERFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 SAAILLGDLA WADDIV + L P AQRR+ RVWA+IR EVLGGQYLDIVAEASA Sbjct 121 ASAAILLGDLALAWADDIVFGI---DLTPQAQRRIRRVWANIRTEVLGGQYLDIVAEASA 177 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 A SI SAMNV T KTACYTVSRPLQLG AAAADR DV IF FG DLGVAFQLRDDVLG Sbjct 178 AASIASAMNVDTFKTACYTVSRPLQLGVAAAADRPDVHDIFSQFGTDLGVAFQLRDDVLG 237 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEAVELA+ SDP+AA LLRTSIG +LTDAQV LR Sbjct 238 VFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAETSDPVAANLLRTSIGAQLTDAQVDRLR 297 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VIE+VGA AAAE RIA LTQRALATLA+APIN AKAGLSELA +A NRSA Sbjct 298 EVIESVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKIATNRSA 349 >gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104] gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291] gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104] gi|336461957|gb|EGO40809.1| geranylgeranyl pyrophosphate synthase [Mycobacterium avium subsp. paratuberculosis S397] Length=349 Score = 481 bits (1239), Expect = 5e-134, Method: Compositional matrix adjust. Identities = 270/352 (77%), Positives = 295/352 (84%), Gaps = 3/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GAIT+QLRRYLH RR A++G DY GLIA LE+FVL GGKRLRP FAYWGW AVA+ Sbjct 1 MTGAITEQLRRYLHDRRAETAYIGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATE 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 PD LLLFSALELLHA ALVHDD+ID SATRRGRPT +R+A+LHRDR W+GSP++FG Sbjct 61 APDDQALLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 MSAAILLGDLA WADDIV V L P A RRV RVWA+IR EVLGGQYLDIVAEASA Sbjct 121 MSAAILLGDLALAWADDIVLGV---DLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASA 177 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 A SI SAMNV T KTACYTVSRPLQLG AAAADR DV +F FG DLGVAFQLRDDVLG Sbjct 178 AASIASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDLFSQFGTDLGVAFQLRDDVLG 237 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEAVELA++SDPLAAKLLR SIG +L+DA+V LR Sbjct 238 VFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAEKSDPLAAKLLRDSIGAQLSDAEVDRLR 297 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VIE+VGA AAAE RIA LTQRALATLA+APIN AKAGLSELA +A NRSA Sbjct 298 DVIESVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKLATNRSA 349 >gi|342859883|ref|ZP_08716536.1| polyprenyl synthetase [Mycobacterium colombiense CECT 3035] gi|342133015|gb|EGT86235.1| polyprenyl synthetase [Mycobacterium colombiense CECT 3035] Length=349 Score = 481 bits (1238), Expect = 7e-134, Method: Compositional matrix adjust. Identities = 269/352 (77%), Positives = 292/352 (83%), Gaps = 3/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GAITDQLRRY+H RR A++G DY GLIA LEDFVL GGKRLRP FAYWGW AV + Sbjct 1 MTGAITDQLRRYMHDRRTETAYIGDDYSGLIAALEDFVLNGGKRLRPAFAYWGWRAVTTE 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 PD LLLFSALELLHA ALVHDD+ID S+TRRGRPT +++AALHRDR W+GS +QFG Sbjct 61 APDEQALLLFSALELLHACALVHDDVIDDSSTRRGRPTTHVQFAALHRDRHWQGSAEQFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +SAAILLGDLA WADDIV V L P A RRV RVWA+IR EVLGGQYLDIVAEASA Sbjct 121 VSAAILLGDLALAWADDIVFGV---ELTPQASRRVRRVWANIRTEVLGGQYLDIVAEASA 177 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 A SI SAMNV T KTACYTVSRPLQLG AAAADR DV +F FG DLGVAFQLRDDVLG Sbjct 178 AASIASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDVFSQFGTDLGVAFQLRDDVLG 237 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEAVELA++SDP+AA LLRTSIG LTDAQV LR Sbjct 238 VFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAEKSDPVAANLLRTSIGAALTDAQVDRLR 297 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VIE+VGA AAAE RIA LTQRALATLA+APIN AKAGLSELA +A NRSA Sbjct 298 DVIESVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKLATNRSA 349 >gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium marinum M] gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium marinum M] Length=340 Score = 481 bits (1238), Expect = 8e-134, Method: Compositional matrix adjust. Identities = 253/340 (75%), Positives = 287/340 (85%), Gaps = 0/340 (0%) Query 13 LHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSA 72 + RR AA++G DY L A LE+FVL GGKRLRP+FAY GW AV + +PDPD+LLLFSA Sbjct 1 MRDRRSQAAYIGDDYGALTAWLEEFVLSGGKRLRPIFAYRGWQAVTTEDPDPDLLLLFSA 60 Query 73 LELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQ 132 LELLHAWAL+HDD+ID S+TRRGRPTA + +AALHRDR+W G QFG+SAAIL+GD+AQ Sbjct 61 LELLHAWALIHDDVIDASSTRRGRPTAHMHFAALHRDRNWLGPAQQFGISAAILIGDVAQ 120 Query 133 VWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVAT 192 WADDI+S+V QS+L+PDAQRRV RVW+DIR EVLGGQYLDIVAEASAA+SI SAM VAT Sbjct 121 AWADDIISRVSQSSLSPDAQRRVQRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVAT 180 Query 193 LKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPS 252 KTACYTVSRPLQLG AAAADR DV F FG DLGVAFQLRDDVLGVFGDPAVTGKPS Sbjct 181 FKTACYTVSRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVLGVFGDPAVTGKPS 240 Query 253 GDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAA 312 GDDL+SGKRTVL+AEA LADRSDP AA LLR+++G+ LTD+QV ELR VI VGA AAA Sbjct 241 GDDLRSGKRTVLIAEAAALADRSDPKAANLLRSAVGSELTDSQVGELREVIVRVGALAAA 300 Query 313 ESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 E+RIA LT+RALATL S PINA+AKAGLS LA A +RSA Sbjct 301 ENRIAGLTRRALATLESIPINASAKAGLSALARTATDRSA 340 >gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length=348 Score = 477 bits (1228), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 270/352 (77%), Positives = 295/352 (84%), Gaps = 4/352 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GAIT+QLRRYLH RR A++G DY GLIA LE+FVL GGKRLRP FAYWGW AVA+ Sbjct 1 MTGAITEQLRRYLHDRRAETAYIGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATE 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 PD LLLFSALELLHA ALVHDD+ID SATRRGRPT +R+A+LHRDR W+GSP++FG Sbjct 61 APDDQALLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 MSAAILLGDLA WADDIV V L P A RRV RVWA+IR EVLGGQYLDIVAEASA Sbjct 121 MSAAILLGDLALAWADDIVLGV---DLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASA 177 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 A SI SAMNV T KTACYTVSRPLQLG AAAADR DV +F FG DLGVAFQLRDDVLG Sbjct 178 AASIASAMNVDTFKTACYTVSRPLQLG-AAAADRPDVHDLFSQFGTDLGVAFQLRDDVLG 236 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEAVELA++SDPLAAKLLR SIG +L+DA+V LR Sbjct 237 VFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAEKSDPLAAKLLRDSIGAQLSDAEVDRLR 296 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VIE+VGA AAAE RIA LTQRALATLA+APIN AKAGLSELA +A NRSA Sbjct 297 DVIESVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKLATNRSA 348 >gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium ulcerans Agy99] gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium ulcerans Agy99] Length=340 Score = 473 bits (1216), Expect = 3e-131, Method: Compositional matrix adjust. Identities = 250/340 (74%), Positives = 285/340 (84%), Gaps = 0/340 (0%) Query 13 LHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSA 72 + RR AA++G DY L A LE+FVL GGKRLRP+FAY GW AV + +PDPD+LLLFSA Sbjct 1 MRDRRSQAAYIGDDYGALTAWLEEFVLSGGKRLRPIFAYRGWPAVTTEDPDPDLLLLFSA 60 Query 73 LELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQ 132 LELLHAWAL+HDD+ID S+TRRGRP A + +AALHRDR+W G QFG+SAAIL+GD+AQ Sbjct 61 LELLHAWALIHDDVIDASSTRRGRPMAHIHFAALHRDRNWLGPAQQFGISAAILIGDVAQ 120 Query 133 VWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVAT 192 WADDI+S+V QS+L+PDAQRRV RVW+DIR EVLGGQYLDIVAEASAA+SI SAM VAT Sbjct 121 AWADDIISRVSQSSLSPDAQRRVQRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVAT 180 Query 193 LKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPS 252 KTACYTVSRPLQLG AAAADR DV F FG DLGVAFQLRDDVLGVFGDPA+TGKPS Sbjct 181 FKTACYTVSRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVLGVFGDPAMTGKPS 240 Query 253 GDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAA 312 GDDL+SGKRTVL+AEA LADRSDP AA LLR+++G+ LTD+QV ELR VI VGA AAA Sbjct 241 GDDLRSGKRTVLIAEAAALADRSDPKAANLLRSAVGSELTDSQVGELREVIVRVGALAAA 300 Query 313 ESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 E+R A LT+RALATL S PINA+AKAGLS LA A +RSA Sbjct 301 ENRNAGLTRRALATLESIPINASAKAGLSALARTATDRSA 340 >gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii PYR-1] Length=359 Score = 453 bits (1165), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 239/352 (68%), Positives = 275/352 (79%), Gaps = 3/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 LA A+T+QLR YL RRR AA++G+ Y L +E+FVL GGKRLRP FAYWGW AVA Sbjct 11 LAAAVTEQLRDYLRARRRDAAYIGAGYAVLTEAVEEFVLRGGKRLRPAFAYWGWRAVAGT 70 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EP P+ L LFSALELLHA ALVHDD+ID SATRRG PT +A HR +W GS +QFG Sbjct 71 EPGPEALRLFSALELLHACALVHDDVIDASATRRGLPTVHRIFAERHRSNNWLGSSEQFG 130 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +SAAILLGD+A VWADDIV+ + + +A RRV RVWA IR EVLGGQYLDIV EA+ Sbjct 131 LSAAILLGDVALVWADDIVAS---AEIGVEAHRRVQRVWAAIRTEVLGGQYLDIVNEATG 187 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 AE++ SA+ V KTA YT+SRPLQLG AAAAD +V + F G LGVAFQLRDDVLG Sbjct 188 AETVASALTVNIYKTASYTISRPLQLGAAAAADCPEVLSAFHELGTSLGVAFQLRDDVLG 247 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEAVELA++ D +AAKLLRTSIGT LTDAQV+E+ Sbjct 248 VFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAEKHDQIAAKLLRTSIGTDLTDAQVKEVC 307 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VIE+VGA AA ESRI LT+RAL L SAPI+ AKAGL+ELA MAANRSA Sbjct 308 LVIESVGALAAVESRIDTLTRRALDILNSAPIDVQAKAGLAELARMAANRSA 359 >gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK] gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length=359 Score = 453 bits (1165), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 236/352 (68%), Positives = 275/352 (79%), Gaps = 3/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 L A+ ++LR YL GRRR AA++G+DY L LE+FVL GGKRLRP FAYWG+ AVA Sbjct 11 LVNAVNEELREYLRGRRRDAAYIGTDYAVLTEALEEFVLRGGKRLRPAFAYWGFRAVAGT 70 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EP+P ++ LFSALELLHA ALVHDDLID SATRRG PT ++ HR +W GS DQFG Sbjct 71 EPEPHIMRLFSALELLHACALVHDDLIDASATRRGLPTVHRIFSERHRSNNWLGSSDQFG 130 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +SAAILLGDL+ VWADDI++ ++ + A RRV RVWA IR EVLGGQYLDIV EAS Sbjct 131 LSAAILLGDLSLVWADDIIA---EAPIDDAAHRRVQRVWAAIRTEVLGGQYLDIVNEASG 187 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 +E++ SA+ V KTA YT+SRPLQLG AAA DR ++ F G LGVAFQLRDDVLG Sbjct 188 SETVASALTVNIYKTASYTISRPLQLGAAAAGDRPEILEAFHELGTSLGVAFQLRDDVLG 247 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 V+GDPAVTGKPSGDDL+SGKRTVL+AEAVELADR DP AA+LLRTSIGT L+DAQV+EL Sbjct 248 VYGDPAVTGKPSGDDLRSGKRTVLLAEAVELADRHDPPAAQLLRTSIGTDLSDAQVKELC 307 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VIEAVGA AA ESRI LT+RAL + SAPI+ AKAGL+ELA +AANRSA Sbjct 308 LVIEAVGALAAVESRIDTLTRRALDIMNSAPIDVRAKAGLAELARLAANRSA 359 >gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=349 Score = 442 bits (1138), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 268/352 (77%), Positives = 296/352 (85%), Gaps = 3/352 (0%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GAITD+LRRYL RR A++GSDY+ L+A LEDFVL GGKRLRP FAYWGW AVA+ Sbjct 1 MTGAITDRLRRYLRDRRADTAYIGSDYEDLVAALEDFVLNGGKRLRPAFAYWGWRAVATG 60 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 EPD +VLLLFSALELLHA ALVHDD+ID SATRRGRPT +R+A LHR R WRGSP++FG Sbjct 61 EPDSEVLLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFADLHRARRWRGSPERFG 120 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 MSAAILLGDLA WADDIV + + L+P A RRV RVWA+IR EVLGGQYLDIVAEAS Sbjct 121 MSAAILLGDLALSWADDIVFR---AELSPGAARRVQRVWAEIRTEVLGGQYLDIVAEASG 177 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 AESI SAMNV T KTACYTVSRPLQLG AAAADR DV +F FG D+GVAFQLRDDVLG Sbjct 178 AESIASAMNVDTYKTACYTVSRPLQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVLG 237 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPAVTGKPSGDDL+SGKRTVL+AEAVELAD+SDPLAAKLLR SIG RLTDA+V LR Sbjct 238 VFGDPAVTGKPSGDDLRSGKRTVLLAEAVELADKSDPLAAKLLRGSIGARLTDAEVDRLR 297 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VI +VGA AAAE RIA LT+RALA L +API+A AKAGLSELA MA +RSA Sbjct 298 EVIASVGALAAAERRIAELTRRALAALDAAPISAAAKAGLSELARMATDRSA 349 >gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS] gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS] gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS] Length=359 Score = 434 bits (1115), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 242/350 (70%), Positives = 276/350 (79%), Gaps = 3/350 (0%) Query 3 GAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREP 62 GA+T+QLR YL RRR AA++GSDY L A LE+FVL GGKRLRP FAYWGW AVA R Sbjct 13 GAVTEQLRDYLSARRRDAAYIGSDYAELTAALEEFVLRGGKRLRPAFAYWGWRAVADRPA 72 Query 63 DPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMS 122 D VLLLFSALELLHA ALVHDD+ID SATRRG PT +A H DR W GS +QFG+S Sbjct 73 DSGVLLLFSALELLHACALVHDDVIDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLS 132 Query 123 AAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAE 182 AAIL GDL+ VWADDIV+ V L DA RRV RVWADIR EVLGGQ+LDI AEAS A+ Sbjct 133 AAILAGDLSLVWADDIVASV---DLPLDAHRRVQRVWADIRTEVLGGQFLDIAAEASGAQ 189 Query 183 SIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVF 242 ++ SAM V T KTA YTVSRPLQLG AAAADR +V IF G D+GVAFQLRDDVLGVF Sbjct 190 TVASAMTVNTYKTASYTVSRPLQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVLGVF 249 Query 243 GDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTV 302 GDPAVTGKPSGDDL+SGKRTVL+AEAVELA+++D A LLR+SIGT L+++QVREL + Sbjct 250 GDPAVTGKPSGDDLRSGKRTVLLAEAVELAEKTDQGTAALLRSSIGTDLSESQVRELCSA 309 Query 303 IEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 IE+VGA A E RIA LT+R+L L +API+ AKAGL+ELA +AANRSA Sbjct 310 IESVGALTAVEERIALLTRRSLEALDAAPIDPQAKAGLTELARLAANRSA 359 >gi|333990369|ref|YP_004522983.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium sp. JDM601] gi|333486337|gb|AEF35729.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium sp. JDM601] Length=327 Score = 422 bits (1084), Expect = 5e-116, Method: Compositional matrix adjust. Identities = 234/330 (71%), Positives = 263/330 (80%), Gaps = 3/330 (0%) Query 23 MGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLHAWALV 82 MG DY GLIA LE+FVL GGKRLRP FAYWGW A+ R+ D LLLFSALELLHA ALV Sbjct 1 MGEDYQGLIAGLEEFVLSGGKRLRPAFAYWGWRAITGRDAVDDELLLFSALELLHACALV 60 Query 83 HDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKV 142 HDD+ID SATRRG PT ++A LHR R WRG DQFG+SAAILLGDLA VWADDIV+ Sbjct 61 HDDVIDASATRRGSPTTHHKFADLHRARGWRGPADQFGISAAILLGDLALVWADDIVAG- 119 Query 143 CQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSR 202 + L DAQRRV RVW+DIR EVLGGQYLDIVAEAS ESI +AM V T KTA YTV R Sbjct 120 --AGLPTDAQRRVRRVWSDIRTEVLGGQYLDIVAEASGDESIAAAMTVNTYKTASYTVVR 177 Query 203 PLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRT 262 PLQLG AAAADR D+ A+F G DLGVAFQLRDDVLG+FGDPAVTGKPSGDDL+SGKRT Sbjct 178 PLQLGVAAAADRPDIQALFHEVGTDLGVAFQLRDDVLGLFGDPAVTGKPSGDDLRSGKRT 237 Query 263 VLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALTQR 322 VLVAEAVELAD+SD AA+ LR S+G+ LTD QVREL +IEAVGA AA E RI +LT+R Sbjct 238 VLVAEAVELADKSDAAAAERLRASLGSALTDVQVRELCDLIEAVGALAAVEDRIDSLTRR 297 Query 323 ALATLASAPINATAKAGLSELAMMAANRSA 352 A+ LA+API+ AKAGL++LA + A+R A Sbjct 298 AMTALAAAPIDEAAKAGLTDLARLVADRKA 327 >gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155] gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155] Length=362 Score = 400 bits (1029), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 232/357 (65%), Positives = 263/357 (74%), Gaps = 10/357 (2%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 LAGA+T+QLR YL RR A++G Y L A +E+FVL GGKR+RP FAYWGW +V Sbjct 11 LAGAVTEQLREYLRERRSDCAYIGPVYAELTAGVEEFVLRGGKRVRPAFAYWGWRSVI-- 68 Query 61 EP-----DPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGS 115 EP PDVL LFSALELL A AL+HDD+ID SATRRG PT + H +R W GS Sbjct 69 EPADAVAGPDVLRLFSALELLQACALIHDDVIDDSATRRGLPTVHRLFTEQHHERGWLGS 128 Query 116 PDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIV 175 QFG+SAAIL GDLA WADDIV+ + L DA RRV VW IR EVLGGQYLDIV Sbjct 129 ERQFGLSAAILAGDLALSWADDIVAG---ADLPVDAHRRVQTVWRHIRTEVLGGQYLDIV 185 Query 176 AEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLR 235 E+S ES+ SA+NV T KTA YTV+RPLQLG AAAADR DV +F G DLGVAFQLR Sbjct 186 TESSGDESVASALNVNTFKTASYTVARPLQLGAAAAADRPDVQELFHRIGNDLGVAFQLR 245 Query 236 DDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQ 295 DDVLGVFGDPAVTGKPSGDDL+SGKRTVL+AEA+ELAD SDP AA LLR S+GT L+D Q Sbjct 246 DDVLGVFGDPAVTGKPSGDDLRSGKRTVLLAEALELADASDPAAAALLRRSVGTELSDTQ 305 Query 296 VRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VREL IE+VGA AA E RI LT+ AL LA+A ++ AKAGLSELA AANR+A Sbjct 306 VRELCDAIESVGALAAVEQRIETLTRDALDVLAAANVHPQAKAGLSELARSAANRTA 362 >gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977] gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus] Length=314 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 183/318 (58%), Positives = 232/318 (73%), Gaps = 7/318 (2%) Query 38 VLGGGKRLRPLFAYWGWHAVASREPDP---DVLLLFSALELLHAWALVHDDLIDRSATRR 94 +L GGKRLRP FAYWGW A+ + +PDP +VL + +ALELLH AL+HDD+ID SATRR Sbjct 1 MLRGGKRLRPAFAYWGWRAI-TDDPDPWNPEVLRVCAALELLHTCALIHDDVIDSSATRR 59 Query 95 GRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRR 154 G PT + +AALHR+ W GSP+QFG+SAAILLGDLA WADD+V + L+P+A R Sbjct 60 GEPTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMV---VGAQLSPEAHVR 116 Query 155 VHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADR 214 VW+ +R+EVLGGQYLDI++E+S ES+E+A+ V KTA YTV RPLQLG A A + Sbjct 117 ARGVWSILRSEVLGGQYLDILSESSGDESVETALRVIRFKTAGYTVQRPLQLGVAIAGEN 176 Query 215 SDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADR 274 ++++ + G D+G+AFQLRDDVLGVFGDP VTGKP+GDDL+SGKRTVL+AEA+ LA + Sbjct 177 AEISRLLGDVGLDIGIAFQLRDDVLGVFGDPKVTGKPAGDDLRSGKRTVLLAEALRLARQ 236 Query 275 SDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINA 334 D A LL + IGT LTD QV E+ ++I +GA A ESRI T RAL LA A I Sbjct 237 RDSAAEDLLHSWIGTPLTDQQVAEMCSLIVDLGALGAVESRIEEHTHRALDQLAGADIAD 296 Query 335 TAKAGLSELAMMAANRSA 352 A+A LS+L + +NRSA Sbjct 297 DARAALSDLVRLVSNRSA 314 >gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1] gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1] Length=330 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 174/331 (53%), Positives = 213/331 (65%), Gaps = 6/331 (1%) Query 23 MGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPD---VLLLFSALELLHAW 79 MG Y + LEDFVL GGKR+RP FA+ GW PD VL SALEL+ A Sbjct 1 MGGGYREAVTTLEDFVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQAC 60 Query 80 ALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIV 139 ALVHDD+ID S TRRG PT + +A HR W G FG AILLGDLA WADD++ Sbjct 61 ALVHDDIIDASTTRRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMI 120 Query 140 SKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYT 199 +S + PDA R+ VW+ +R EVLGGQ+LDI EA A ESI +AM V KTA YT Sbjct 121 R---ESGITPDASARISPVWSAMRTEVLGGQFLDISNEARADESIVAAMKVNRYKTAAYT 177 Query 200 VSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSG 259 + RPL LG A A + + + FG D+G+AFQLRDD+LGVFGDPAVTGKPSGDDL++G Sbjct 178 IERPLHLGAALAGADDTLVSAYRRFGTDIGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAG 237 Query 260 KRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAAL 319 KRTVL A +++ AD DP AA LLR IGT L+D+ V LRT I ++GA A E +I L Sbjct 238 KRTVLFAMSLQRADAEDPAAAALLREGIGTDLSDSDVDTLRTTITSLGAVADVEKQIEEL 297 Query 320 TQRALATLASAPINATAKAGLSELAMMAANR 350 AL+TLA++ AK L+E+A+ A R Sbjct 298 VGNALSTLAASTATTEAKQQLTEMAVAATRR 328 >gi|333918978|ref|YP_004492559.1| putative geranylgeranyl pyrophosphate synthase [Amycolicicoccus subflavus DQS3-9A1] gi|333481199|gb|AEF39759.1| Putative geranylgeranyl pyrophosphate synthase [Amycolicicoccus subflavus DQS3-9A1] Length=348 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 172/354 (49%), Positives = 227/354 (65%), Gaps = 10/354 (2%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 +AGA+ D R+ RR +G+++ + LEDFVL GGKR+RP FA+ GW Sbjct 1 MAGALRDFFRK----RRSLVEPVGTEFRSAVNHLEDFVLRGGKRVRPTFAWAGWLGAGGH 56 Query 61 EPDP---DVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPD 117 P +VL ++LEL+ A AL+HDD+ID S TRRG PT + +A HRD+ W G P+ Sbjct 57 VDAPGTHNVLAACASLELIQACALIHDDIIDNSRTRRGFPTLHVEFARQHRDKGWGGDPE 116 Query 118 QFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAE 177 FG +A IL+GDLA WADD+ S + DA++R VWA +R EVLGGQ LDIV E Sbjct 117 AFGEAAGILIGDLALAWADDMFHG---SEIGTDARQRALPVWAAMRTEVLGGQLLDIVVE 173 Query 178 ASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDD 237 AS S SA+ + KTA YTV RPL LG A A + + F FGAD+G+AFQLRDD Sbjct 174 ASGDGSHGSALKINRFKTAAYTVERPLHLGAAIAGADDALISAFRTFGADIGIAFQLRDD 233 Query 238 VLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVR 297 +LGVFGDPA TGKPSGDDL++GKRT L+A A+E AD S P AA LR+++GT L++A V Sbjct 234 LLGVFGDPATTGKPSGDDLRAGKRTALLAYALESADASRPGAAATLRSAVGTDLSEADVD 293 Query 298 ELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 LR++I ++GA A E +IA LT RAL L ++ ++ K L +A+ R+ Sbjct 294 SLRSLIISLGAVARVEKQIADLTDRALTALHASSASSGTKDALHAMALAVTRRT 347 >gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis SK121] gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis SK121] Length=379 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 172/357 (49%), Positives = 227/357 (64%), Gaps = 12/357 (3%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 L G LR + RR +++G Y+ ++ LE FVL GGKR+RP FA+ GW Sbjct 28 LPGLFEAALRDFFDSRRELVSNIGGGYEEAVSTLEAFVLRGGKRVRPSFAWTGWLGAGG- 86 Query 61 EPDPD------VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRG 114 DP+ V+ +ALEL+ A ALVHDD+ID S TRRG PT + + HRD +W G Sbjct 87 --DPNGKNADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFENQHRDEEWSG 144 Query 115 SPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDI 174 FG + AILLGDLA WADD++ +S ++P+A RV VW+ +R EVLGGQ+LDI Sbjct 145 DSAHFGEAVAILLGDLALAWADDMIR---ESGISPEAAARVSPVWSAMRTEVLGGQFLDI 201 Query 175 VAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQL 234 EA E++E+AM V KTA YT+ RPL LG A +++ + FG D+G+AFQL Sbjct 202 SNEARGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELVDAYRTFGTDIGIAFQL 261 Query 235 RDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDA 294 RDD+LGVFGDP+VTGKPSGDDL +GKRTVL A A+ AD +DP AA+LLR IGT+LTD Sbjct 262 RDDLLGVFGDPSVTGKPSGDDLIAGKRTVLFAMALARADAADPAAAELLRNGIGTQLTDT 321 Query 295 QVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 +V LR VI +GA E++I L + A L S+ A +KA L+++A+ A RS Sbjct 322 EVDTLRQVITDLGAVTDVETQIDTLVEAAANALDSSTATAESKARLTDMAIAATKRS 378 >gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644] Length=362 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 163/346 (48%), Positives = 215/346 (63%), Gaps = 6/346 (1%) Query 9 LRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPD--- 65 +R + RR AA +G D+ ++ DLE FVL GGKR+RP FA+ GW P Sbjct 19 IRNFFIERRAEAAALGPDFAVMVGDLESFVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEA 78 Query 66 VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAI 125 VL S ELLHA L+HDD+ID S TRRG P A + YA HR + G FG AI Sbjct 79 VLSACSGFELLHAAGLIHDDIIDASRTRRGHPAAHITYAERHRASRFSGDSQIFGTGTAI 138 Query 126 LLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIE 185 L+GDLA +WAD +V S L DAQ RV VW+ +R+EV+ GQ LD++++A E ++ Sbjct 139 LIGDLALIWADVLVRG---SRLPADAQARVSPVWSAVRSEVMYGQLLDLISQARDDEDVD 195 Query 186 SAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDP 245 +A+ V KTA YTV RPLQ G A A D+ + FGA LG+AFQLRDD+LGVFGDP Sbjct 196 AALRVNRYKTASYTVERPLQFGAAIAGASPDLITAYRSFGAGLGIAFQLRDDLLGVFGDP 255 Query 246 AVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEA 305 VTGKPSGDDL+ GKRTVL+A A++LAD DP AA LR S+GT +++A + +R ++ Sbjct 256 EVTGKPSGDDLREGKRTVLLATALKLADEQDPEAAAFLRASVGTDISEADLARIRAILVD 315 Query 306 VGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 VGA E +I T A+A L ++ + AK L+E+A+ R+ Sbjct 316 VGAVEHTERQIRVRTDEAVAVLEASSATSPAKHQLAEMAIKVTQRA 361 >gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis] Length=379 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 172/357 (49%), Positives = 226/357 (64%), Gaps = 12/357 (3%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 L G LR + RR +++G Y+ ++ LE FVL GGKR+RP FA+ GW Sbjct 28 LPGVFEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGG- 86 Query 61 EPDPD------VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRG 114 DP+ V+ +ALEL+ A ALVHDD+ID S TRRG PT + + HR +W G Sbjct 87 --DPNGSGADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSG 144 Query 115 SPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDI 174 FG + AILLGDLA WADD++ +S ++PDA RV VW+ +R EVLGGQ+LDI Sbjct 145 DSAHFGEAVAILLGDLALAWADDMIR---ESGISPDAAARVSPVWSAMRTEVLGGQFLDI 201 Query 175 VAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQL 234 EA E++E+AM V KTA YT+ RPL LG A +++ + FG D+G+AFQL Sbjct 202 SNEARGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQL 261 Query 235 RDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDA 294 RDD+LGVFGDP+VTGKPSGDDL +GKRTVL A A+ AD +DP AA+LLR IGT+LTD Sbjct 262 RDDLLGVFGDPSVTGKPSGDDLIAGKRTVLFAMALARADAADPAAAELLRNGIGTQLTDN 321 Query 295 QVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 +V LR VI +GA E++I L + A L S+ A +KA L+++A+ A RS Sbjct 322 EVDTLRQVITDLGAVTDVETQIDTLVEAAANALDSSTATAESKARLTDMAIAATKRS 378 >gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica IFM 10152] Length=383 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 175/347 (51%), Positives = 214/347 (62%), Gaps = 6/347 (1%) Query 9 LRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPD--- 65 L + RR A +G ++ LE FVL GGKR RP FA+ GW P+ Sbjct 40 LSDFFTSRRPAVRALGPVFEEAADALEAFVLRGGKRTRPAFAWTGWLGAGGSPTAPEADA 99 Query 66 VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAI 125 VL +ALEL+ A ALVHDD+ID S TRR PT + + HR+R W G P FG+S AI Sbjct 100 VLTACAALELVQACALVHDDIIDSSRTRRRFPTVHVDFEQRHRERGWTGDPAHFGVSVAI 159 Query 126 LLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIE 185 L+GDLA WADD+V S L A R VWA +R EVLGGQ LDI EA +S+E Sbjct 160 LIGDLALAWADDMVHA---SGLDAAAIGRFAPVWALMRTEVLGGQLLDINGEAGRDDSVE 216 Query 186 SAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDP 245 +A+ + KTA YTV RPL LG A A +++ A + FG D+GVAFQLRDD+LGVFGDP Sbjct 217 AALRINRYKTAAYTVERPLHLGAAIADADAELVAAYRTFGTDIGVAFQLRDDLLGVFGDP 276 Query 246 AVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEA 305 VTGKPSGDDL+ GKRTVL+AEA+ AD +DP AA LLRTSIGT L +V LR V+ Sbjct 277 EVTGKPSGDDLREGKRTVLLAEALRRADATDPAAASLLRTSIGTDLAAEEVERLRAVLID 336 Query 306 VGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 +GA E RIA LT R LA L ++ AK L +A+ A R+A Sbjct 337 LGAVDDVERRIADLTDRGLAALETSSAAPAAKQTLRGMALAATRRTA 383 >gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis PR4] gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis PR4] Length=379 Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 170/354 (49%), Positives = 223/354 (63%), Gaps = 6/354 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 L G LR + RR +++G Y+ ++ LE FVL GGKR+RP FA+ GW Sbjct 28 LPGMFEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGD 87 Query 61 EPDPD---VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPD 117 D V+ +ALEL+ A ALVHDD+ID S TRRG PT + + HR +W G Sbjct 88 PNGSDAEAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSA 147 Query 118 QFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAE 177 FG + AILLGDLA WADD++ +S ++PDA RV VW+ +R EVLGGQ+LDI E Sbjct 148 HFGEAVAILLGDLALAWADDMIR---ESGISPDAAARVSPVWSAMRTEVLGGQFLDISNE 204 Query 178 ASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDD 237 A E++E+AM V KTA YT+ RPL LG A +++ + FG D+G+AFQLRDD Sbjct 205 ARGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDD 264 Query 238 VLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVR 297 +LGVFGDP+VTGKPSGDDL +GKRTVL A A+ AD +DP AA+LLR IGT+LTD +V Sbjct 265 LLGVFGDPSVTGKPSGDDLIAGKRTVLFAMALARADAADPAAAELLRNGIGTQLTDNEVD 324 Query 298 ELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 LR VI +GA E++I L + A L S+ +KA L+++A+ A RS Sbjct 325 TLRQVITDLGAVTDVETQIDTLVEAAANALDSSTATTESKARLTDMAIAATKRS 378 >gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4] gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4] Length=385 Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 173/353 (50%), Positives = 218/353 (62%), Gaps = 6/353 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 LA + + LR + R+ +G Y + LEDFVL GGKR+RP FA+ GW Sbjct 34 LAAEVENALREFFTSRQALVDAVGGGYREAVTTLEDFVLRGGKRVRPAFAWTGWLGAGGD 93 Query 61 EPDPD---VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPD 117 P VL SALEL+ A ALVHDD+ID S TRRG PT + + HR W G Sbjct 94 PRGPGAGPVLRACSALELVQACALVHDDIIDASTTRRGFPTVHVEFEEQHRAGRWSGDSA 153 Query 118 QFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAE 177 FG AILLGDLA WADD++ +S + PD R+ VW+ +R EVLGGQ+LDI E Sbjct 154 HFGEGVAILLGDLALAWADDMIR---ESGITPDQSARISPVWSAMRTEVLGGQFLDISNE 210 Query 178 ASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDD 237 A ESI++AM V KTA YT+ RPL LG A A + + + FG D+G+AFQLRDD Sbjct 211 VRADESIDAAMKVNRYKTAAYTIERPLHLGAALAGADDSLVSAYRRFGTDIGIAFQLRDD 270 Query 238 VLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVR 297 +LGVFGDPAVTGKPSGDDL++GKRT L A +++ AD DP AA LLR IGT L+DA V Sbjct 271 LLGVFGDPAVTGKPSGDDLRAGKRTALFAMSLQRADAEDPAAAALLREGIGTDLSDADVD 330 Query 298 ELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 LR +I ++GA A E +I L AL+TLA++ AK L+E+A+ A R Sbjct 331 TLRNMITSLGAVADVEKQIEDLVANALSTLATSTATTAAKQQLTEMAVAATRR 383 >gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length=370 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 169/357 (48%), Positives = 222/357 (63%), Gaps = 10/357 (2%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 L G + + L YL RR + + + + + +L FVLGGGKR+RP FA+WGW A Sbjct 17 LPGRVQETLADYLRTRRTQSRELDAAFATAVDELVRFVLGGGKRIRPTFAWWGWRAAGGA 76 Query 61 EPDPDVLLLF---SALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPD 117 P + S+LELL A ALVHDDLID S TRRG PT +AALHR + W G Sbjct 77 ADGPQAQAMLRAASSLELLQACALVHDDLIDDSDTRRGNPTVHQAFAALHRHQRWNGEDR 136 Query 118 QFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAE 177 QFGM+AAILLGDLA WADD++ S L P+A R R W +R EVL GQYLD++ Sbjct 137 QFGMAAAILLGDLALAWADDMLHA---SGLPPEAMARGLRPWRAMRTEVLAGQYLDLLGP 193 Query 178 ASAAESIESAMNVATLKTACYTVSRPLQLGTA-AAADRSDVAAIFEHFGADLGVAFQLRD 236 E+ ++A+ + LK+A YTV RPL+LG A AD + + A+ FG+D+GVAFQLRD Sbjct 194 VRGDETPQAALRIDELKSASYTVQRPLELGAELAGADETALEAL-RRFGSDIGVAFQLRD 252 Query 237 DVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELAD-RSDPLAAKLLRTSIG-TRLTDA 294 D+LGVFGDP VTGKP+GDDL+ GKRT+L+AEA+E A + D A LLR +G L + Sbjct 253 DLLGVFGDPEVTGKPAGDDLREGKRTLLIAEALESAQGQGDQDALDLLRGVLGDENLDEK 312 Query 295 QVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 +V + R + +GA A E RI LT A+A L A + A + L+ELA+ +R+ Sbjct 313 RVEQSREALRRLGAVDAVERRITELTGTAMAALHGAGLAEPAASRLAELAVAVTDRN 369 >gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length=358 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 169/357 (48%), Positives = 222/357 (63%), Gaps = 10/357 (2%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 L G + + L YL RR + + + + + +L FVLGGGKR+RP FA+WGW A Sbjct 5 LPGRVQETLADYLRTRRTQSRELDAAFATAVDELVRFVLGGGKRIRPTFAWWGWRAAGGA 64 Query 61 EPDPDVLLLF---SALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPD 117 P + S+LELL A ALVHDDLID S TRRG PT +AALHR + W G Sbjct 65 ADGPQAQAMLRAASSLELLQACALVHDDLIDDSDTRRGNPTVHQAFAALHRHQRWNGEDR 124 Query 118 QFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAE 177 QFGM+AAILLGDLA WADD++ S L P+A R R W +R EVL GQYLD++ Sbjct 125 QFGMAAAILLGDLALAWADDMLHA---SGLPPEAMARGLRPWRAMRTEVLAGQYLDLLGP 181 Query 178 ASAAESIESAMNVATLKTACYTVSRPLQLGTA-AAADRSDVAAIFEHFGADLGVAFQLRD 236 E+ ++A+ + LK+A YTV RPL+LG A AD + + A+ FG+D+GVAFQLRD Sbjct 182 VRGDETPQAALRIDELKSASYTVQRPLELGAELAGADETALEAL-RRFGSDIGVAFQLRD 240 Query 237 DVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELAD-RSDPLAAKLLRTSIG-TRLTDA 294 D+LGVFGDP VTGKP+GDDL+ GKRT+L+AEA+E A + D A LLR +G L + Sbjct 241 DLLGVFGDPEVTGKPAGDDLREGKRTLLIAEALESAQGQGDQDALDLLRGVLGDENLDEK 300 Query 295 QVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 +V + R + +GA A E RI LT A+A L A + A + L+ELA+ +R+ Sbjct 301 RVEQSREALRRLGAVDAVERRITELTGTAMAALHGAGLAEPAASRLAELAVAVTDRN 357 >gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707] gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707] Length=389 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 170/351 (49%), Positives = 216/351 (62%), Gaps = 6/351 (1%) Query 5 ITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDP 64 + D LR + R +G Y +A LE FVL GGKR+RP+F + GW P Sbjct 42 VEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDATGP 101 Query 65 DVLLLFSALEL---LHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGM 121 + A + A ALVHDD+ID S TRRG PT + +A H W G +FG Sbjct 102 EAPAALRAASALELVQACALVHDDIIDASTTRRGFPTVHVEFADQHSAHHWSGGSAEFGR 161 Query 122 SAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAA 181 + AILLGDLA WADD++ ++ L+PDAQ R+ VW+ +R EVLGGQ+LDI +E Sbjct 162 AVAILLGDLALAWADDMIR---EAGLSPDAQARISPVWSAMRTEVLGGQFLDISSEVRGD 218 Query 182 ESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGV 241 E++E+A+ V KTA YT+ RPL LG A A + A + FG D+G+AFQLRDD+LGV Sbjct 219 ETVEAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDLLGV 278 Query 242 FGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRT 301 FGDP VTGKPSGDDL++GKRTVL AEA++ AD SDP AA LLR SIGT L+DAQV LR+ Sbjct 279 FGDPEVTGKPSGDDLRAGKRTVLFAEALQRADASDPAAAALLRESIGTDLSDAQVATLRS 338 Query 302 VIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VI +GA AE RI+ LT AL+ L + K L E+A+ R A Sbjct 339 VITDLGAVDDAERRISELTDSALSALDGSTATDEGKLRLREMAIAVTRRDA 389 >gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] Length=360 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 167/352 (48%), Positives = 218/352 (62%), Gaps = 8/352 (2%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPD 63 AI + + RR AA +G D+ + +LE++VL GGKR+RP FA+ GW A +PD Sbjct 12 AIDAAISDFFAERRAEAASLGEDFAATVGELENYVLRGGKRVRPTFAWLGWIG-AGGDPD 70 Query 64 ----PDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQF 119 P VL + ELLHA L+HDD+ID S TRRG P A + +A HR R + G P F Sbjct 71 DPVAPAVLRACAGFELLHASGLIHDDIIDASRTRRGHPAAHVVFAERHRMRRFSGDPGAF 130 Query 120 GMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEAS 179 G AAIL+GDLA VW+D +V S L DAQ R+ VW+ +R EV+ GQ LD++++AS Sbjct 131 GAGAAILVGDLALVWSDVMVRA---SGLPADAQTRLGPVWSAVRYEVMYGQLLDLISQAS 187 Query 180 AAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVL 239 E +++A+ V KTA YTV RPLQ G A A + + + FGAD+G+AFQLRDD+L Sbjct 188 DEEGVDAALLVDQYKTASYTVERPLQFGAAIAGADAGLVDAYRAFGADIGIAFQLRDDLL 247 Query 240 GVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVREL 299 GVFGDPAVTGKPSGDDL+ GKRTVL+A A++ AD DP AA LR +IGT LT + Sbjct 248 GVFGDPAVTGKPSGDDLREGKRTVLLATALKRADACDPRAAAFLRATIGTDLTGDDLARA 307 Query 300 RTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 R V+ VGA E I +A+A L ++ AK L+ LA A R+ Sbjct 308 RAVLTDVGAVQHIEREIERRADQAVAVLEASSATGFAKQQLAALATKATQRA 359 >gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S] gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S] Length=373 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 169/351 (49%), Positives = 216/351 (62%), Gaps = 6/351 (1%) Query 5 ITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDP 64 + D LR + R +G Y +A LE FVL GGKR+RP+F + GW P Sbjct 26 VEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDATGP 85 Query 65 DVLLLFSALEL---LHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGM 121 + A + A ALVHDD+ID S TRRG PT + +A H W G +FG Sbjct 86 EAPAALRAASALELVQACALVHDDIIDASTTRRGFPTVHVEFADQHSAHHWSGGSAEFGR 145 Query 122 SAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAA 181 + AILLGDLA WADD++ ++ L+PDAQ R+ VW+ +R EVLGGQ+LDI +E Sbjct 146 AVAILLGDLALAWADDMIR---EAGLSPDAQARISPVWSAMRTEVLGGQFLDISSEVRGD 202 Query 182 ESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGV 241 E++E+A+ V KTA YT+ RPL LG A A + A + FG D+G+AFQLRDD+LGV Sbjct 203 ETVEAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDLLGV 262 Query 242 FGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRT 301 FGDP +TGKPSGDDL++GKRTVL AEA++ AD SDP AA LLR SIGT L+DAQV LR+ Sbjct 263 FGDPEITGKPSGDDLRAGKRTVLFAEALQRADASDPAAAALLRESIGTDLSDAQVATLRS 322 Query 302 VIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 VI +GA AE RI+ LT AL+ L + K L E+A+ R A Sbjct 323 VITDLGAVDDAERRISELTDSALSALDGSTATDEGKLRLREMAIAVTRRDA 373 >gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length=356 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 165/357 (47%), Positives = 222/357 (63%), Gaps = 15/357 (4%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 LA + L YL RR M + + L DFVL GGKR+RP FA+WGW A A Sbjct 10 LAKHVDSALAAYLADRRALGERMERSFTEAVDGLTDFVLSGGKRVRPTFAWWGWRA-AGG 68 Query 61 EPDPD----VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSP 116 +PD + VL S+LEL+ A AL+HDDL+D S TRRGRPT +++A HR+ W SP Sbjct 69 DPDQESAGRVLTAVSSLELIQACALIHDDLMDASETRRGRPTIHVQFARRHRENSWLSSP 128 Query 117 DQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVA 176 +QFG++AA+L+GD+A WADD++ + L DA +R+ W D+R E+L GQYLD++ Sbjct 129 EQFGLAAAVLIGDVALAWADDML---FAAGLPTDALQRLSLPWRDMRTEMLAGQYLDVLT 185 Query 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236 +A S ++A+ + LKTA YTV RPL +G A +++ FG D+GVAFQLRD Sbjct 186 QARGDASADAALRIDRLKTAAYTVERPLHMGAAIGGGSAELIEGLRAFGRDIGVAFQLRD 245 Query 237 DVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQV 296 D+LGVFGDPAVTGKP+GDDL+ GKRT+LVA VE +D L L R +G DA+V Sbjct 246 DLLGVFGDPAVTGKPAGDDLREGKRTLLVALGVEHG--ADALEGALGRPDLG----DAEV 299 Query 297 RELRTVIEAVGARAAAESRIAALTQRALATLASAPI-NATAKAGLSELAMMAANRSA 352 +R + AVGA A E RI LT+ AL L +AP+ + L+ LA+ A R++ Sbjct 300 DVVREQLVAVGAVDACERRITELTESALRALEAAPVADPAVTERLAGLAVSATKRTS 356 >gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726] gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726] Length=359 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 159/352 (46%), Positives = 218/352 (62%), Gaps = 6/352 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GA+ ++L +L RR A +G+ ++ LE FVL GGKR+RP++A+ G+ A Sbjct 10 IPGAVREKLAIFLDQRREHVAEIGAPVSTAMSFLESFVLDGGKRVRPMYAWAGYLAAGRG 69 Query 61 EPDPDVLL-LFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQF 119 P+ +L S+LE + A AL+HDD+ID S TRRG+PT LHR+ D+ G P+ F Sbjct 70 SESPEAMLRAASSLEFIQACALIHDDIIDASNTRRGKPTVHREAERLHRESDFLGDPEFF 129 Query 120 GMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEAS 179 G S AIL+GD A V+A+D+ S L+P+A +R W +R EVLGGQ LDI EA+ Sbjct 130 GTSVAILVGDFALVYAEDMFQ---DSGLSPEALQRAREPWRGMRTEVLGGQLLDISLEAA 186 Query 180 AAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVL 239 +ES+ + +V KTA YT+ RPL LG A A R ++ + F +G D+G+A+QLRDD L Sbjct 187 GSESVALSNSVNRYKTAAYTIERPLHLGAAIAGAREELISAFRGYGHDIGIAYQLRDDQL 246 Query 240 GVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQ-VRE 298 GVFGDPA+TGKP+GDDL+ GKRT L+A A++ AD DP AA LR IG R +D Q + Sbjct 247 GVFGDPAITGKPAGDDLREGKRTELLALALQRADERDPSAAATLRKFIG-RTSDPQDLLR 305 Query 299 LRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 L +I GA E RI ALT+ LA L +A ++ L LA+ A R Sbjct 306 LSQIIADSGAPDEIERRITALTESGLAHLRAANVDPQITETLEHLAIQATTR 357 >gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1] Length=382 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 162/322 (51%), Positives = 205/322 (64%), Gaps = 12/322 (3%) Query 37 FVLGGGKRLRPLFAYWGWHAVASREPDPD----VLLLFSALELLHAWALVHDDLIDRSAT 92 FVLGGGKRLRP FA+WGW A +P D VL ++LEL+ A ALVHDDL+D S+T Sbjct 65 FVLGGGKRLRPTFAWWGWRG-AGGDPGSDHAQAVLTAVASLELIQACALVHDDLMDASST 123 Query 93 RRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPD-A 151 RRGRPT + +A H DW G P +FG + AIL+GDLAQVWADD+ SA PD A Sbjct 124 RRGRPTVHVEFARTHAANDWSGPPARFGAAVAILVGDLAQVWADDMF----HSAALPDGA 179 Query 152 QRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAA 211 R W +R EVL GQYLD++A+AS + +A+ + KTA YTV RPL LG A A Sbjct 180 HGRAAEPWRAMRTEVLAGQYLDVLAQASGDTAESTALQIDRFKTAAYTVERPLHLGAAIA 239 Query 212 ADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVEL 271 V + +GAD+GVAFQLRDD+LGVFGDP VTGKP+GDDL+ GKRT+LVA ++ Sbjct 240 GAEPQVVNAYRRYGADIGVAFQLRDDLLGVFGDPRVTGKPAGDDLREGKRTLLVAAGLQR 299 Query 272 AD-RSDPLAAKLLRTSIG-TRLTDAQVRELRTVIEAVGARAAAESRIAALTQRALATLAS 329 A+ R DP A + + ++G L D + R+ + +GA A E RIAALT AL L + Sbjct 300 AEQRGDPAAHEAITAALGDPGLPDDALDRARSALAELGAVQAVEQRIAALTGSALDALDA 359 Query 330 APINATAKAGLSELAMMAANRS 351 AP+ +A L ELA A R+ Sbjct 360 APVAEPGRAHLFELAERATRRA 381 >gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141] gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141] Length=359 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 160/351 (46%), Positives = 213/351 (61%), Gaps = 4/351 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GA+ ++L +L RR A +G+ ++ LE FVL GGKR+RP +A+ G+ A Sbjct 10 IPGAVREELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAWAGYLAAGRG 69 Query 61 EPDPDVLLLFSA-LELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQF 119 E DP +L +A LE + A AL+HDD+ID S TRRG PT LHR+ ++ G P+ F Sbjct 70 EEDPVAMLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRESEYLGDPEFF 129 Query 120 GMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEAS 179 G S AIL+GDLA V+A+D+ S L+ A R W +R EV+GGQ LDI EA+ Sbjct 130 GTSVAILVGDLALVYAEDMFQD---SGLSAAALHRARSPWRGMRTEVIGGQLLDISLEAA 186 Query 180 AAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVL 239 +ES+E A +V KTA YT+ RPL LG A A ++ A F +G D+G+A+QLRDD L Sbjct 187 GSESVELANSVNRYKTAAYTIERPLHLGAATAGASEELIAAFRGYGHDIGIAYQLRDDQL 246 Query 240 GVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVREL 299 GVFGDPAVTGKP+GDDL+ GKRT L+A A++ AD SDP AA LR IG ++ L Sbjct 247 GVFGDPAVTGKPAGDDLREGKRTELLALALQRADESDPQAAATLRKLIGRTSDPQELSRL 306 Query 300 RTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 +I GA E RI ALTQ L L +A ++ L +LA+ A R Sbjct 307 AQIIADSGAPEEIERRIDALTQSGLQHLRAAQVDPAVTETLEQLAIKATAR 357 >gi|302206535|gb|ADL10877.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis C231] Length=372 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 165/353 (47%), Positives = 215/353 (61%), Gaps = 9/353 (2%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASRE-- 61 A+ +LR + GR R + +G ++ LEDFVLGGGKR+RP +A+ G+ A E Sbjct 23 AVEHKLRAFFQGRARKISVIGEPVSRVVTYLEDFVLGGGKRIRPSYAWAGFLAGNGLEGT 82 Query 62 PDPD-VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 DP+ VL S+LEL+ A AL+HDD+ID S +RRG+PT A HRD W G FG Sbjct 83 EDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRSAEACHRDNSWNGDSAHFG 142 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 S AILLGDLA WADD+ S L+ A R W +R EV+GGQ LD+ E++ Sbjct 143 ESIAILLGDLAFAWADDMFRT---SGLSDAAIARTSNAWRGMRTEVIGGQLLDVFLESAG 199 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 +ESIE A NV KTA YT+ RPL +G A A + +G D+GVA+QLRDD+LG Sbjct 200 SESIELAENVNRFKTAAYTIERPLHIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLLG 259 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPL-AAKLLRTSIGTRLTDAQ-VRE 298 VFGDPAVTGKP+GDDL+ GKRTVLVA+A+ELA +D A + +R +G R+TD + Sbjct 260 VFGDPAVTGKPAGDDLREGKRTVLVAKALELAHAADNADAVESIRKGVG-RVTDPHDIAC 318 Query 299 LRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 L I GA A E RI L +R ++ L +A I+ A++ L LA A RS Sbjct 319 LADTIRKTGAEAGVEKRIDELAERGISHLNTADISEDARSVLVSLAHKATARS 371 >gi|337291135|ref|YP_004630156.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium ulcerans BR-AD22] gi|334699441|gb|AEG84237.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium ulcerans BR-AD22] Length=372 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 162/352 (47%), Positives = 210/352 (60%), Gaps = 7/352 (1%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASRE-- 61 A+ +LR + GR R + +G + LEDFVLGGGKR+RP +A+ G+ A E Sbjct 23 AVEQKLREFFQGRSRKISVIGEPVSRAVTYLEDFVLGGGKRIRPSYAWAGFLAGNGLEGA 82 Query 62 PDPD-VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 DP+ VL S+LEL+ A AL+HDD+ID S +RRG+PT A HRD W G FG Sbjct 83 EDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRTAEARHRDNSWNGDSAHFG 142 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 S AILLGDLA WADD+ S L+ A R W +R EV+GGQ LD+ E++ Sbjct 143 ESIAILLGDLAFAWADDMFRT---SGLSDAAIARTSNAWRGMRTEVIGGQLLDVFLESAG 199 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 +ESIE A NV KTA YT+ RPL +G A A + +G D+GVA+QLRDD+LG Sbjct 200 SESIELAENVNHFKTAAYTIERPLHIGAAIAGADGKIVRALRDYGRDIGVAYQLRDDLLG 259 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPL-AAKLLRTSIGTRLTDAQVREL 299 VFG+PAVTGKP+GDDL+ GKRTVLVA+A+ELA +D A + +R +GT + L Sbjct 260 VFGNPAVTGKPAGDDLREGKRTVLVAKALELAHAADNADAVESIRKGVGTVTEPHDIARL 319 Query 300 RTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 I GA A E RI L +R ++ L +A I+ A+ L LA A RS Sbjct 320 ADTIRQTGAEAGVEKRIDELAERGISHLCTADISDDARNILVSLANKATARS 371 >gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302331089|gb|ADL21283.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis 1002] gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis I19] gi|341825217|gb|AEK92738.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis PAT10] Length=393 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 165/353 (47%), Positives = 215/353 (61%), Gaps = 9/353 (2%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASRE-- 61 A+ +LR + GR R + +G ++ LEDFVLGGGKR+RP +A+ G+ A E Sbjct 44 AVEHKLRAFFQGRARKISVIGEPVSRVVTYLEDFVLGGGKRIRPSYAWAGFLAGNGLEGT 103 Query 62 PDPD-VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 DP+ VL S+LEL+ A AL+HDD+ID S +RRG+PT A HRD W G FG Sbjct 104 EDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRSAEACHRDNSWNGDSAHFG 163 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 S AILLGDLA WADD+ S L+ A R W +R EV+GGQ LD+ E++ Sbjct 164 ESIAILLGDLAFAWADDMFRT---SGLSDAAIARTSNAWRGMRTEVIGGQLLDVFLESAG 220 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 +ESIE A NV KTA YT+ RPL +G A A + +G D+GVA+QLRDD+LG Sbjct 221 SESIELAENVNRFKTAAYTIERPLHIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLLG 280 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPL-AAKLLRTSIGTRLTDAQ-VRE 298 VFGDPAVTGKP+GDDL+ GKRTVLVA+A+ELA +D A + +R +G R+TD + Sbjct 281 VFGDPAVTGKPAGDDLREGKRTVLVAKALELAHAADNADAVESIRKGVG-RVTDPHDIAC 339 Query 299 LRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 L I GA A E RI L +R ++ L +A I+ A++ L LA A RS Sbjct 340 LADTIRKTGAEAGVEKRIDELAERGISHLNTADISEDARSVLVSLAHKATARS 392 >gi|334697246|gb|AEG82043.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium ulcerans 809] Length=372 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 162/352 (47%), Positives = 210/352 (60%), Gaps = 7/352 (1%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASRE-- 61 A+ +LR + GR R + +G + LEDFVLGGGKR+RP +A+ G+ A E Sbjct 23 AVEQKLREFFQGRSRKISVIGEPVSRAVTYLEDFVLGGGKRIRPSYAWAGFLAGNGLEGA 82 Query 62 PDPD-VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 DP+ VL S+LEL+ A AL+HDD+ID S +RRG+PT A HRD W G FG Sbjct 83 EDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRTAEARHRDNSWNGDSAHFG 142 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 S AILLGDLA WADD+ S L+ A R W +R EV+GGQ LD+ E++ Sbjct 143 ESIAILLGDLAFAWADDMFRT---SGLSDAAIARTSNAWRGMRTEVIGGQLLDVFLESAG 199 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 +ESIE A NV KTA YT+ RPL +G A A + +G D+GVA+QLRDD+LG Sbjct 200 SESIELAENVNRFKTAAYTIERPLHIGAAIAGADEKIVRALRDYGRDIGVAYQLRDDLLG 259 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPL-AAKLLRTSIGTRLTDAQVREL 299 VFG+PAVTGKP+GDDL+ GKRTVLVA+A+ELA +D A + +R +GT + L Sbjct 260 VFGNPAVTGKPAGDDLREGKRTVLVAKALELAHAADNADAVESIRKGVGTVTEPHDIARL 319 Query 300 RTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 I GA A E RI L +R ++ L +A I+ A+ L LA A RS Sbjct 320 ADTIRQTGAEAGVEKRIDELAERGISHLCTADISDDARNILVSLANKATARS 371 >gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030] gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030] Length=368 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 161/354 (46%), Positives = 208/354 (59%), Gaps = 7/354 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGW---HAV 57 + A+ +L ++ + +G + L FVLGGGKR+RP F + G+ + + Sbjct 16 IPAAVQRELEKFFTEHGPSVDVIGPPVSEAVEHLRTFVLGGGKRIRPTFGWVGFVGANGL 75 Query 58 ASREPDPD-VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSP 116 + E DP VL S+LE + A AL+HDD+ID SATRRG PT + A HR+ +W G Sbjct 76 ENTEEDPAAVLCAVSSLEFIQACALIHDDIIDASATRRGNPTVHVAAAHSHREHNWLGDS 135 Query 117 DQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVA 176 D+FG S AIL+GDLA VWADD+ S L+ A R W +R EV+GGQ LDI Sbjct 136 DKFGESLAILVGDLALVWADDMWH---HSGLSHAALLRASEPWRGMRTEVIGGQILDISL 192 Query 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236 EA+ ES E A V KTA YT+ RPL LG A A D A +G D+G+AFQLRD Sbjct 193 EAAGCESEELANAVNRFKTAAYTIERPLHLGAAIAGADDDTIAALRRYGHDIGIAFQLRD 252 Query 237 DVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQV 296 D+LGVFGDP VTGKP+GDDL+ GKRTVL + A++ AD DP AA+ LR IGT LT ++ Sbjct 253 DILGVFGDPEVTGKPAGDDLREGKRTVLYSRALQAADERDPAAAQRLRDGIGTALTPDEI 312 Query 297 RELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 EL +I GA E RI LT+ LA + A ++ A L LA+ A R Sbjct 313 AELSGIIRETGAVEDVEKRIDELTESGLAHVRGAALSPEAVETLETLAVNATAR 366 >gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035] Length=359 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 160/351 (46%), Positives = 212/351 (61%), Gaps = 4/351 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GA+ ++L +L RR A +G+ ++ LE FVL GGKR+RP +A+ G+ A Sbjct 10 IPGAVREELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAWAGYLAAGRG 69 Query 61 EPDPDVLLLFSA-LELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQF 119 E DP +L +A LE + A AL+HDD+ID S TRRG PT LHR+ ++ G P+ F Sbjct 70 EEDPAAMLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRESEYLGDPEFF 129 Query 120 GMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEAS 179 G S AIL+GDLA V+A+D+ S L+ A R W +R EV+GGQ LDI EA+ Sbjct 130 GTSVAILVGDLALVYAEDMFQD---SGLSAAALHRARSPWRGMRTEVIGGQLLDISLEAA 186 Query 180 AAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVL 239 +ES+E A +V KTA YT+ RPL LG A A ++ A F +G D+G+A+QLRDD L Sbjct 187 GSESVELANSVNRYKTAAYTIERPLHLGAAIAGASEELIAAFRGYGHDIGIAYQLRDDQL 246 Query 240 GVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVREL 299 GVFGDPAVTGKP+GDDL+ GKRT L+A A+ AD SDP AA LR IG ++ L Sbjct 247 GVFGDPAVTGKPAGDDLREGKRTELLALALHRADESDPQAAATLRKLIGRTSDPQELSRL 306 Query 300 RTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 +I GA E RI ALTQ L L +A ++ L +LA+ A R Sbjct 307 AQIIADSGAPEEIERRIDALTQSGLQHLHAAQVDPAVTETLEQLAIKATAR 357 >gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247] gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247] Length=376 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 163/331 (50%), Positives = 204/331 (62%), Gaps = 13/331 (3%) Query 34 LEDFVLGGGKRLRPLFAYWGWHAVASREPDP-------DVLLLFSALELLHAWALVHDDL 86 + DFVL GGKR+RP+F Y GW S D L + +ALEL+ A AL+HDD+ Sbjct 47 VRDFVLQGGKRIRPVFVYAGWRCGISARAAGADAAEAADTLRVCAALELVQACALIHDDI 106 Query 87 IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKVCQSA 146 IDRS TRRGRPT + HRDR W G P FG++AAIL GDLA WADD+V + A Sbjct 107 IDRSDTRRGRPTVHRDFEHRHRDRQWSGDPGGFGVAAAILAGDLALAWADDLVHGLAPGA 166 Query 147 LAPDAQRR-----VHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVS 201 APD V WA +R EVLGGQYLDIV EA+ ES+++A V KTA YTV+ Sbjct 167 -APDDDATPLPAPVGATWASMRTEVLGGQYLDIVNEAAGDESVQAAYQVMEYKTAAYTVA 225 Query 202 RPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKR 261 RPL+LG A +D+ A G DLG+AFQLRDD+LGVFGDPA TGKPSGDDL SGKR Sbjct 226 RPLELGARMAGAPADLIADLRSVGHDLGIAFQLRDDLLGVFGDPARTGKPSGDDLISGKR 285 Query 262 TVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALTQ 321 T L+A A+ A + P A LR +IG L+D ++ R+++ VGA ES I+ L Sbjct 286 TALLATALRRAGDTGPRLAAQLRDAIGRELSDDELDSARSILVDVGAVDEVESTISELLT 345 Query 322 RALATLASAPINATAKAGLSELAMMAANRSA 352 AL+ LA A I ++ L+ +A A+R A Sbjct 346 SALSVLARADIGPQIRSELTAVAHRTAHREA 376 >gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens ATCC 49725] gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens ATCC 49725] Length=359 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 157/352 (45%), Positives = 215/352 (62%), Gaps = 6/352 (1%) Query 1 LAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASR 60 + GA+ ++L +L RR A +G+ ++ LE FVL GGKR+RP++A+ G+ A Sbjct 10 IPGAVREKLAIFLDQRRDHVAEIGAPVSTAMSFLESFVLDGGKRVRPMYAWAGYLAAGRG 69 Query 61 EPDPDVLL-LFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQF 119 P+ +L S+LE + A AL+HDD+ID S TRRG+PT LHR+ D+ G P+ F Sbjct 70 SESPEAMLRAASSLEFIQACALIHDDIIDASNTRRGKPTVHREAERLHRESDFLGDPEFF 129 Query 120 GMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEAS 179 G S AIL+GD A V+A+D+ S L+P+A +R W +R EVLGGQ LDI EA+ Sbjct 130 GTSVAILVGDFALVYAEDMFQ---DSGLSPEALQRARDPWRGMRTEVLGGQLLDISLEAA 186 Query 180 AAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVL 239 +ES+ + +V KTA YT+ RPL LG A A + + F +G D+G+A+QLRDD L Sbjct 187 GSESVALSNSVNRYKTAAYTIERPLHLGAAIAGASDQLISAFRGYGHDIGIAYQLRDDQL 246 Query 240 GVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQ-VRE 298 GVFGDP +TGKP+GDDL+ GKRT L+A A++ AD DP AA LR IG R +D Q + Sbjct 247 GVFGDPEITGKPAGDDLREGKRTELLALALQRADERDPSAAATLRKFIG-RTSDTQDLLR 305 Query 299 LRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 L +I GA E RI ALT+ LA L +A ++ L LA+ A R Sbjct 306 LSQIIADSGAPDEIERRITALTESGLAHLRAANVDPQITETLEHLAIQATTR 357 >gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306] gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306] Length=366 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 155/347 (45%), Positives = 209/347 (61%), Gaps = 6/347 (1%) Query 8 QLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPD-- 65 +L +L R A +G I LE F+LGGGKR+RPL+ + G+ A D D Sbjct 22 ELADFLKEREPQIAQIGRPVTNAIEHLERFILGGGKRIRPLYVWAGFVAADGLLGDEDPQ 81 Query 66 -VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAA 124 VL S+LE + + AL+HDD++D S TRRG PT A HR W G P+ FG SAA Sbjct 82 AVLRAASSLEFIQSCALIHDDIVDASDTRRGNPTVHRAVEAEHRKLGWTGDPEAFGRSAA 141 Query 125 ILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESI 184 IL+GD++ VWA+D++ S L+ A +R W +R EV+GGQ LD+ EA+A ES+ Sbjct 142 ILIGDMSLVWAEDML---LDSGLSQAALQRTREPWRAMRTEVIGGQLLDVSLEAAAIESV 198 Query 185 ESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGD 244 E + +V KTA YT+ RPL LG A A + F +G D+G+AFQLRDD LGVFGD Sbjct 199 ELSDSVNRFKTAAYTIERPLHLGAAIAGAPQKLIDAFRGYGRDIGIAFQLRDDQLGVFGD 258 Query 245 PAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIE 304 P VTGKP+GDDL+ GKRTVL+A A++ AD DP AA+ LR ++G + + ++ +IE Sbjct 259 PKVTGKPAGDDLREGKRTVLMAIALQRADEQDPSAAQFLRDNLGATDDPSVLSKMAQMIE 318 Query 305 AVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 GA E RI ALTQ L LA+A +N+ L LA+ + R+ Sbjct 319 DSGAPEEIEQRIDALTQSGLEYLAAAQVNSEVTELLRSLAIQSTARA 365 >gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length=361 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 162/351 (47%), Positives = 218/351 (63%), Gaps = 12/351 (3%) Query 9 LRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPD--- 65 LR +LH + + + ++ L DFVLGGGKRLRP FA+W W A PD D Sbjct 16 LRDFLHDAGESICRIEPTFGPAVSTLRDFVLGGGKRLRPTFAWWAWRG-AGGTPDSDEAE 74 Query 66 -VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAA 124 VL ++LEL+ A AL+HDD+ID S +RRG PT + +AA H W GS + FG +AA Sbjct 75 GVLRAVASLELIQACALIHDDVIDSSDSRRGSPTVHVAFAARHTRERWLGSAEAFGQAAA 134 Query 125 ILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESI 184 +L+GDLA WA+D+ + + L P W +R EVL GQYLD+ +A+ S+ Sbjct 135 VLIGDLALAWAEDMFA---ECGLPPATIAAARPAWRAMRTEVLAGQYLDVHTQATGDTSV 191 Query 185 ESAMNVATLKTACYTVSRPLQLGTA-AAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFG 243 E+A+ V LKTA YTV RPL LG A A AD + A+ + FG +LGVAFQLRDD+LGVFG Sbjct 192 EAALRVDRLKTAAYTVQRPLHLGAALAGADDELIDALLD-FGGELGVAFQLRDDLLGVFG 250 Query 244 DPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAA-KLLRTSIG-TRLTDAQVRELRT 301 DP+VTGKP+GDDL+ GKRT+LVA ++ A+R K++ ++G LTDA+V ++R Sbjct 251 DPSVTGKPAGDDLREGKRTLLVALGLDYAERQGSTKERKMIAEAVGDPDLTDAEVDDVRQ 310 Query 302 VIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 + +VGA A E RI A+T+ ALA L A + A L ELA A R++ Sbjct 311 ALVSVGAVAEVERRIEAMTENALAALRKASLAEPAAQRLVELADRATRRTS 361 >gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium diphtheriae NCTC 13129] gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium diphtheriae] Length=374 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 152/353 (44%), Positives = 213/353 (61%), Gaps = 8/353 (2%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHA---VASR 60 A+ + L + GR+R A +G + L ++VLGGGKR+RP +A+ G+ A + ++ Sbjct 24 AVEEVLAEFFEGRKRKVAKIGVPVSNAVELLVEYVLGGGKRIRPTYAWAGFVASGGLTNK 83 Query 61 EPDPD-VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQF 119 DP VL +LEL+ A AL+HDD+ID S TRRG PT H + G +F Sbjct 84 TEDPGAVLTAIGSLELIQACALIHDDIIDASDTRRGNPTVHRVAERTHAESHRLGDSARF 143 Query 120 GMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEAS 179 G S AIL+GDLA VWADD+ S L+ A RR W +R EV+GGQ LDI E++ Sbjct 144 GESIAILVGDLAMVWADDMFH---NSGLSDAAIRRASNAWRGMRTEVIGGQLLDIYIEST 200 Query 180 AAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVL 239 +ESIE A V KTA YT+ RPL +G A A ++G D+G+AFQLRDD+L Sbjct 201 GSESIELAETVNRFKTAAYTIERPLHIGAALAGADDQTVHCLRNYGRDIGLAFQLRDDLL 260 Query 240 GVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPL-AAKLLRTSIGTRLTDAQVRE 298 GVFGDP+VTGKP+GDDL+ GKRTVLVA+A+E+ + + + A+++R +G + + Sbjct 261 GVFGDPSVTGKPAGDDLREGKRTVLVAKALEILESAGSIHEAEMIRRDLGAVSGAEDIAQ 320 Query 299 LRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRS 351 L ++I + GA A E RIA L LA +++ I+A A+ L LA+ A +RS Sbjct 321 LASIIRSSGAADAVEERIATLRTSGLAHISNDVIDAEAQDFLKHLAIKATSRS 373 >gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium glutamicum ATCC 13032] Length=366 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 149/350 (43%), Positives = 208/350 (60%), Gaps = 7/350 (2%) Query 5 ITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVA----SR 60 + D+L ++L + A +G+ +A L FVL GGKR+RPL+A+ G+ A S Sbjct 18 VRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSS 77 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 E VL ++LE + A AL+HDD+ID S TRRG PT A HR ++ G P+ FG Sbjct 78 EKLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFG 137 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +S +IL GD+A VWA+D++ S L+ +A R W +R EV+GGQ LDI E+ A Sbjct 138 VSVSILAGDMALVWAEDMLQ---DSGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHA 194 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 ES+E A +V KTA YT++RPL LG + A + H+G D+G+AFQLRDD+LG Sbjct 195 NESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLG 254 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPA+TGKP+GDD++ GKRTVL+A A++ AD+ P AA +R +G + + + Sbjct 255 VFGDPAITGKPAGDDIREGKRTVLLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVIT 314 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 I A GA E RI+ LT+ LA L I +A L LA+ + R Sbjct 315 EHIRATGAEEEVEQRISQLTESGLAHLDDVDIPDEVRAQLRALAIRSTER 364 >gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] Length=371 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 149/350 (43%), Positives = 208/350 (60%), Gaps = 7/350 (2%) Query 5 ITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVA----SR 60 + D+L ++L + A +G+ +A L FVL GGKR+RPL+A+ G+ A S Sbjct 23 VRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSS 82 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 E VL ++LE + A AL+HDD+ID S TRRG PT A HR ++ G P+ FG Sbjct 83 EKLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFG 142 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +S +IL GD+A VWA+D++ S L+ +A R W +R EV+GGQ LDI E+ A Sbjct 143 VSVSILAGDMALVWAEDMLQ---DSGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHA 199 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 ES+E A +V KTA YT++RPL LG + A + H+G D+G+AFQLRDD+LG Sbjct 200 NESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLG 259 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPA+TGKP+GDD++ GKRTVL+A A++ AD+ P AA +R +G + + + Sbjct 260 VFGDPAITGKPAGDDIREGKRTVLLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVIT 319 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 I A GA E RI+ LT+ LA L I +A L LA+ + R Sbjct 320 EHIRATGAEEEVEQRISQLTESGLAHLDDVDIPDEVRAQLRALAIRSTER 369 >gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium lipophiloflavum DSM 44291] gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium lipophiloflavum DSM 44291] Length=380 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 157/355 (45%), Positives = 208/355 (59%), Gaps = 10/355 (2%) Query 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHA------V 57 A+ L +L R +G + L DF+LGGGKR+RPL+A+ G+ V Sbjct 30 AVKGALEAFLDERYAEVEKIGPPVTRSVQHLRDFILGGGKRIRPLYAWTGFFGARAAGGV 89 Query 58 ASREPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPD 117 S +P+ VL S+LEL+ A AL+HDD+ID S TRRG PT A H D G Sbjct 90 GSEDPEA-VLRAVSSLELIQACALIHDDIIDASDTRRGNPTVHRAVEARHSKDDLFGDSA 148 Query 118 QFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAE 177 +G + AIL+GD A +WA+D+ S L+ A R W +R EV+GGQ LDI E Sbjct 149 DYGRNEAILIGDFALIWAEDMWR---YSGLSEAALTRAAEPWRGMRTEVIGGQLLDIALE 205 Query 178 ASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDD 237 A+A ES+E A NV KTA YT+ RPL LG A A +D F +G D+G+AFQLRDD Sbjct 206 AAANESVEMANNVNRYKTAAYTIERPLHLGAAIAGAPADTIEAFRGYGRDIGIAFQLRDD 265 Query 238 VLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVR 297 +LGVFGD AVTGKP+GDDL+ GKRTVL+A A+ D +DP++A LR +G ++ Sbjct 266 LLGVFGDEAVTGKPAGDDLREGKRTVLLAAALNRLDATDPVSAARLRDRVGRTSDRDELA 325 Query 298 ELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA 352 EL ++E+ GA A E +IA LT+ LA L+ A I+ L +LA+ A R A Sbjct 326 ELAAIVESSGAIADVEKQIADLTESGLAHLSRAGIDGEVANTLRDLAIRATERRA 380 >gi|344044842|gb|EGV40517.1| hypothetical protein CgS9114_08036 [Corynebacterium glutamicum S9114] Length=366 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 149/350 (43%), Positives = 208/350 (60%), Gaps = 7/350 (2%) Query 5 ITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVA----SR 60 + D+L ++L + A +G+ +A L FVL GGKR+RPL+A+ G+ A S Sbjct 18 VRDRLTQFLDAQELTIAGIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGLKNSS 77 Query 61 EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFG 120 E VL ++LE + A AL+HDD+ID S TRRG PT A HR ++ G P+ FG Sbjct 78 EKLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFG 137 Query 121 MSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASA 180 +S +IL GD+A VWA+D++ S L+ +A R W +R EV+GGQ LDI E+ A Sbjct 138 VSVSILAGDMALVWAEDMLQ---DSGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHA 194 Query 181 AESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLG 240 ES+E A +V KTA YT++RPL LG + A + H+G D+G+AFQLRDD+LG Sbjct 195 NESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLG 254 Query 241 VFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELR 300 VFGDPA+TGKP+GDD++ GKRTVL+A A++ AD+ P AA +R +G + + + Sbjct 255 VFGDPAITGKPAGDDIREGKRTVLLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVIA 314 Query 301 TVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANR 350 I A GA E RI+ LT+ LA L I +A L LA+ + R Sbjct 315 KHIRATGAEEEVEQRISQLTESGLAHLDDVDIPDEVRAQLRALAIRSTER 364 Lambda K H 0.320 0.133 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 654597672016 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40