BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2181 Length=427 Score E Sequences producing significant alignments: (Bits) Value gi|15609318|ref|NP_216697.1| integral membrane protein [Mycobact... 824 0.0 gi|289745454|ref|ZP_06504832.1| integral membrane protein [Mycob... 823 0.0 gi|289574866|ref|ZP_06455093.1| integral membrane protein [Mycob... 822 0.0 gi|308375799|ref|ZP_07445158.2| conserved membrane protein [Myco... 805 0.0 gi|308232057|ref|ZP_07414769.2| conserved membrane protein [Myco... 791 0.0 gi|308370934|ref|ZP_07423278.2| conserved membrane protein [Myco... 789 0.0 gi|289570296|ref|ZP_06450523.1| conserved membrane protein [Myco... 782 0.0 gi|15827415|ref|NP_301678.1| integral membrane protein [Mycobact... 660 0.0 gi|240168239|ref|ZP_04746898.1| hypothetical protein MkanA1_0293... 657 0.0 gi|183983215|ref|YP_001851506.1| hypothetical protein MMAR_3225 ... 631 8e-179 gi|118618824|ref|YP_907156.1| hypothetical protein MUL_3536 [Myc... 626 2e-177 gi|254819750|ref|ZP_05224751.1| hypothetical protein MintA_07494... 597 1e-168 gi|336461903|gb|EGO40756.1| Protein of unknown function (DUF2029... 575 7e-162 gi|296166045|ref|ZP_06848494.1| integral membrane protein [Mycob... 572 6e-161 gi|254774985|ref|ZP_05216501.1| hypothetical protein MaviaA2_099... 569 4e-160 gi|41408017|ref|NP_960853.1| hypothetical protein MAP1919 [Mycob... 568 7e-160 gi|118466800|ref|YP_881517.1| hypothetical protein MAV_2312 [Myc... 564 9e-159 gi|342859891|ref|ZP_08716544.1| hypothetical protein MCOL_13468 ... 545 6e-153 gi|120404515|ref|YP_954344.1| putative integral membrane protein... 475 6e-132 gi|118468966|ref|YP_888524.1| integral membrane protein [Mycobac... 474 1e-131 gi|145223555|ref|YP_001134233.1| hypothetical protein Mflv_2968 ... 474 2e-131 gi|315443902|ref|YP_004076781.1| hypothetical protein Mspyr1_230... 472 5e-131 gi|108800242|ref|YP_640439.1| hypothetical protein Mmcs_3276 [My... 458 6e-127 gi|126435865|ref|YP_001071556.1| hypothetical protein Mjls_3287 ... 452 4e-125 gi|333990362|ref|YP_004522976.1| hypothetical protein JDM601_172... 427 2e-117 gi|111018127|ref|YP_701099.1| integral membrane protein [Rhodoco... 273 5e-71 gi|325676950|ref|ZP_08156622.1| integral membrane protein [Rhodo... 271 2e-70 gi|312140168|ref|YP_004007504.1| integral membrane protein [Rhod... 267 2e-69 gi|226360256|ref|YP_002778034.1| mannosyltransferase [Rhodococcu... 255 1e-65 gi|326383222|ref|ZP_08204910.1| hypothetical protein SCNU_09809 ... 224 3e-56 gi|25028631|ref|NP_738685.1| hypothetical protein CE2075 [Coryne... 211 2e-52 gi|259507690|ref|ZP_05750590.1| membrane protein [Corynebacteriu... 211 3e-52 gi|262202428|ref|YP_003273636.1| hypothetical protein Gbro_2502 ... 207 3e-51 gi|54022539|ref|YP_116781.1| hypothetical protein nfa5720 [Nocar... 206 5e-51 gi|344044850|gb|EGV40525.1| hypothetical protein CgS9114_08076 [... 206 5e-51 gi|145296142|ref|YP_001138963.1| hypothetical protein cgR_2062 [... 206 8e-51 gi|19553382|ref|NP_601384.1| hypothetical protein NCgl2100 [Cory... 206 9e-51 gi|21324950|dbj|BAB99573.1| Hypothetical membrane protein [Coryn... 206 9e-51 gi|343927898|ref|ZP_08767364.1| putative mannosyltransferase [Go... 205 2e-50 gi|237785322|ref|YP_002906027.1| hypothetical protein ckrop_0723... 200 5e-49 gi|319948991|ref|ZP_08023092.1| hypothetical protein ES5_06317 [... 199 1e-48 gi|260577734|ref|ZP_05845669.1| membrane protein [Corynebacteriu... 195 1e-47 gi|340794108|ref|YP_004759571.1| hypothetical protein CVAR_1142 ... 192 1e-46 gi|256379510|ref|YP_003103170.1| hypothetical protein Amir_5506 ... 192 1e-46 gi|68536591|ref|YP_251296.1| hypothetical protein jk1505 [Coryne... 191 3e-46 gi|326382536|ref|ZP_08204227.1| hypothetical protein SCNU_06340 ... 189 1e-45 gi|256394569|ref|YP_003116133.1| hypothetical protein Caci_5433 ... 186 7e-45 gi|227503261|ref|ZP_03933310.1| conserved hypothetical protein [... 184 2e-44 gi|134103781|ref|YP_001109442.1| integral membrane protein [Sacc... 181 2e-43 gi|291005761|ref|ZP_06563734.1| integral membrane protein [Sacch... 181 2e-43 >gi|15609318|ref|NP_216697.1| integral membrane protein [Mycobacterium tuberculosis H37Rv] gi|15841671|ref|NP_336708.1| hypothetical protein MT2236 [Mycobacterium tuberculosis CDC1551] gi|31793359|ref|NP_855852.1| integral membrane protein [Mycobacterium bovis AF2122/97] 46 more sequence titles Length=427 Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/427 (100%), Positives = 427/427 (100%), Gaps = 0/427 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG Sbjct 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV Sbjct 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC Sbjct 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD Sbjct 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR Sbjct 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG Sbjct 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL Sbjct 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 Query 421 TPAPTAS 427 TPAPTAS Sbjct 421 TPAPTAS 427 >gi|289745454|ref|ZP_06504832.1| integral membrane protein [Mycobacterium tuberculosis 02_1987] gi|289685982|gb|EFD53470.1| integral membrane protein [Mycobacterium tuberculosis 02_1987] Length=427 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/427 (99%), Positives = 427/427 (100%), Gaps = 0/427 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG Sbjct 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS+AITVLTLVLLIASTAIV Sbjct 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASIAITVLTLVLLIASTAIV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC Sbjct 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD Sbjct 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR Sbjct 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG Sbjct 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL Sbjct 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 Query 421 TPAPTAS 427 TPAPTAS Sbjct 421 TPAPTAS 427 >gi|289574866|ref|ZP_06455093.1| integral membrane protein [Mycobacterium tuberculosis K85] gi|339632210|ref|YP_004723852.1| hypothetical protein MAF_21920 [Mycobacterium africanum GM041182] gi|289539297|gb|EFD43875.1| integral membrane protein [Mycobacterium tuberculosis K85] gi|339331566|emb|CCC27262.1| putative conserved integral membrane protein [Mycobacterium africanum GM041182] Length=427 Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/427 (99%), Positives = 426/427 (99%), Gaps = 0/427 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG Sbjct 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLYGGGV FHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV Sbjct 61 RPLYGGGVFFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC Sbjct 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD Sbjct 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR Sbjct 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG Sbjct 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL Sbjct 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 Query 421 TPAPTAS 427 TPAPTAS Sbjct 421 TPAPTAS 427 >gi|308375799|ref|ZP_07445158.2| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308376932|ref|ZP_07440588.2| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308379137|ref|ZP_07485205.2| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308344991|gb|EFP33842.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308349303|gb|EFP38154.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308357952|gb|EFP46803.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|323719080|gb|EGB28225.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|339295096|gb|AEJ47207.1| hypothetical protein CCDC5079_2017 [Mycobacterium tuberculosis CCDC5079] Length=419 Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/419 (99%), Positives = 419/419 (100%), Gaps = 0/419 (0%) Query 9 VGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGV 68 +GSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGV Sbjct 1 MGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGV 60 Query 69 LFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWP 128 LFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWP Sbjct 61 LFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWP 120 Query 129 TSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWP 188 TSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWP Sbjct 121 TSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWP 180 Query 189 RGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHT 248 RGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHT Sbjct 181 RGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHT 240 Query 249 LHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEP 308 LHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEP Sbjct 241 LHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEP 300 Query 309 TLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTP 368 TLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTP Sbjct 301 TLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTP 360 Query 369 IDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 427 IDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS Sbjct 361 IDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 419 >gi|308232057|ref|ZP_07414769.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308369645|ref|ZP_07418546.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308372160|ref|ZP_07427645.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004] 9 more sequence titles Length=411 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 411/411 (100%), Gaps = 0/411 (0%) Query 17 VLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGL 76 +LWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGL Sbjct 1 MLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGL 60 Query 77 NLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAP 136 NLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAP Sbjct 61 NLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAP 120 Query 137 ARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLG 196 ARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLG Sbjct 121 ARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLG 180 Query 197 IALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG 256 IALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG Sbjct 181 IALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG 240 Query 257 AAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVA 316 AAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVA Sbjct 241 AAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVA 300 Query 317 LFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHR 376 LFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHR Sbjct 301 LFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHR 360 Query 377 ETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 427 ETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS Sbjct 361 ETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 411 >gi|308370934|ref|ZP_07423278.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308373343|ref|ZP_07431951.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308374515|ref|ZP_07436342.2| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308330179|gb|EFP19030.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308337824|gb|EFP26675.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308341584|gb|EFP30435.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|339298717|gb|AEJ50827.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180] Length=410 Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/410 (99%), Positives = 410/410 (100%), Gaps = 0/410 (0%) Query 18 LWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLN 77 +WCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLN Sbjct 1 MWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLN 60 Query 78 LPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPA 137 LPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPA Sbjct 61 LPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPA 120 Query 138 RLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGI 197 RLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGI Sbjct 121 RLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGI 180 Query 198 ALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGA 257 ALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGA Sbjct 181 ALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGA 240 Query 258 AALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVAL 317 AALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVAL Sbjct 241 AALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVAL 300 Query 318 FGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRE 377 FGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRE Sbjct 301 FGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRE 360 Query 378 TTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 427 TTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS Sbjct 361 TTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 410 >gi|289570296|ref|ZP_06450523.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289544050|gb|EFD47698.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=425 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/427 (97%), Positives = 416/427 (98%), Gaps = 2/427 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG Sbjct 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV Sbjct 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC Sbjct 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 RRTP R ++ + +LTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD Sbjct 181 AHRRTPCTR--LMWAWDSPQLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 238 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR Sbjct 239 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 298 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG Sbjct 299 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 358 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL Sbjct 359 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 418 Query 421 TPAPTAS 427 TPAPTAS Sbjct 419 TPAPTAS 425 >gi|15827415|ref|NP_301678.1| integral membrane protein [Mycobacterium leprae TN] gi|221229892|ref|YP_002503308.1| hypothetical protein MLBr_00893 [Mycobacterium leprae Br4923] gi|3080492|emb|CAA18689.1| putative integral membrane protein [Mycobacterium leprae] gi|13092965|emb|CAC31274.1| probable conserved integral membrane protein [Mycobacterium leprae] gi|219932999|emb|CAR70988.1| probable conserved integral membrane protein [Mycobacterium leprae Br4923] Length=428 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/428 (81%), Positives = 370/428 (87%), Gaps = 1/428 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS + PEVG++ + CLLWLLA ALG VAW+L GHTPYRIDIDIYQMG +AWLDG Sbjct 1 MSRQQTPEVGNKHRQIGRCCLLWLLAVTALGQVAWQLLGHTPYRIDIDIYQMGGQAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLY G VLFHTPIGLNLPFTYPPLAA+ F PFAWL MPAASVAIT+ TL+LLI ST IV Sbjct 61 RPLYSGDVLFHTPIGLNLPFTYPPLAAIAFCPFAWLHMPAASVAITLTTLMLLIVSTIIV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD W SR VP PA LRRLWLAV+IV+PA IWLEPISSNFAFGQINVVLMTLVI DC Sbjct 121 LTRLDVWAMSRAVPGPAWLRRLWLAVIIVSPAAIWLEPISSNFAFGQINVVLMTLVIADC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTPWPRGLMLGLGIALKLTPAVFLLYF+LRRD RAALT+ ASFA ATL+GFVLAWRD Sbjct 181 VPRRTPWPRGLMLGLGIALKLTPAVFLLYFVLRRDNRAALTSWASFAGATLVGFVLAWRD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWTHT+H+T+RIGAAALNTDQNIAGALARL +G+ ERF LW AG LLVLAAT WAM Sbjct 241 SWEYWTHTVHNTERIGAAALNTDQNIAGALARLGLGEHERFLLWAAGCLLVLAATAWAML 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRAGEP LAVICVALFGLVVSPVSWSHHWVWMLPAVLV G+L WRR+NVA+A++S AG Sbjct 301 RVLRAGEPMLAVICVALFGLVVSPVSWSHHWVWMLPAVLVTGILSWRRQNVAVAVISAAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRG- 419 V LMRWTPI LLPQH+ETTAVWWRQLAGMSYVWWALAVIV GLTVT R+T Q S T+ Sbjct 361 VALMRWTPIGLLPQHQETTAVWWRQLAGMSYVWWALAVIVATGLTVTTRVTSQDSATQTL 420 Query 420 LTPAPTAS 427 LTP TAS Sbjct 421 LTPVSTAS 428 >gi|240168239|ref|ZP_04746898.1| hypothetical protein MkanA1_02932 [Mycobacterium kansasii ATCC 12478] Length=428 Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/427 (82%), Positives = 381/427 (90%), Gaps = 0/427 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS WR+PE+GSRLGR LWCLL L+A ALGYVAWRLFGH PYRIDIDIYQMG +AWLDG Sbjct 1 MSTWRSPELGSRLGRVSLWCLLGLVAAGALGYVAWRLFGHIPYRIDIDIYQMGGQAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLY G V FHTPIGL+LPFTYPPLAAV+FSPFAWL+MPAAS+AIT+LTLV+LI ST +V Sbjct 61 RPLYSGDVKFHTPIGLDLPFTYPPLAAVVFSPFAWLKMPAASIAITLLTLVVLIVSTMVV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT L+ WPTS L+P PA +RRLWLA++IVAPA+IWLEP+SSNFAFGQIN VLMTLVI+DC Sbjct 121 LTALNVWPTSALLPGPAWVRRLWLAMIIVAPASIWLEPLSSNFAFGQINAVLMTLVILDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 FPRRTPWPRGL+LGLGIALKLTPAVFLLYFLLRRDGRAALTA+ASFA AT+ GF LAWRD Sbjct 181 FPRRTPWPRGLLLGLGIALKLTPAVFLLYFLLRRDGRAALTAVASFAAATVAGFALAWRD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 S EYWTHTLHHTDRIG+A+LNTDQNIAGALARL IG+ E F LWVA SL+VL AT+WAMR Sbjct 241 SREYWTHTLHHTDRIGSASLNTDQNIAGALARLPIGEHESFLLWVALSLVVLVATVWAMR 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRA EP LAVICVALFGLVVSPVSWSHHWVWMLPAVLV G+L WRRRN ALA+++ AG Sbjct 301 RVLRADEPALAVICVALFGLVVSPVSWSHHWVWMLPAVLVTGVLAWRRRNTALAVVTAAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 V LMRWTPIDLLP+HRE TA WWRQLAGMSYVWWALAVIVVAGLTVTAR+T + S G Sbjct 361 VALMRWTPIDLLPKHREATAEWWRQLAGMSYVWWALAVIVVAGLTVTARLTTEPSPEPGR 420 Query 421 TPAPTAS 427 TP TA+ Sbjct 421 TPVSTAA 427 >gi|183983215|ref|YP_001851506.1| hypothetical protein MMAR_3225 [Mycobacterium marinum M] gi|183176541|gb|ACC41651.1| conserved hypothetical integral membrane protein [Mycobacterium marinum M] Length=427 Score = 631 bits (1627), Expect = 8e-179, Method: Compositional matrix adjust. Identities = 341/426 (81%), Positives = 372/426 (88%), Gaps = 0/426 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS WR+P+VGSRLGR +W LLWL+A ALGYV WRLFGH PYRIDIDIYQMG +AWLDG Sbjct 1 MSTWRSPDVGSRLGRFSVWYLLWLVAAAALGYVVWRLFGHIPYRIDIDIYQMGGQAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLY G V FHTPIGL+LPFTYPPL+AV+FSPFAWL MPAASVAIT LTLV+LIAST +V Sbjct 61 RPLYSGDVKFHTPIGLDLPFTYPPLSAVVFSPFAWLHMPAASVAITFLTLVVLIASTVVV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD WP S +P PA LRRLWLAV+IVAPA++WLEPISSNFAFGQIN VLMTLVI+DC Sbjct 121 LTALDVWPDSEQLPGPAWLRRLWLAVIIVAPASLWLEPISSNFAFGQINAVLMTLVILDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 FPRRTPWPRGL+LGLGIALKLTPAVFLLYFLLRRD RAALTA+ASF VATL GF LAWRD Sbjct 181 FPRRTPWPRGLLLGLGIALKLTPAVFLLYFLLRRDNRAALTAVASFVVATLAGFALAWRD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWT TL HTDRIG+AALNTDQNIAGALARL IG+ +WV SL VLA T+WAMR Sbjct 241 SWEYWTDTLLHTDRIGSAALNTDQNIAGALARLPIGEHASHLMWVLLSLGVLAVTVWAMR 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRA EP+LAVICVALFGLVVSPVSWSHHWVWMLPAV+V G+L WRRRNVALA++++AG Sbjct 301 RVLRAEEPSLAVICVALFGLVVSPVSWSHHWVWMLPAVVVTGVLAWRRRNVALAVVTIAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 + LMRW+PIDLLP+HRE TA WWRQLAGMSYVWWALAVIVVAGLTVT RMT QR G Sbjct 361 LALMRWSPIDLLPKHREATAAWWRQLAGMSYVWWALAVIVVAGLTVTTRMTMQRPAEPGR 420 Query 421 TPAPTA 426 TP P A Sbjct 421 TPVPAA 426 >gi|118618824|ref|YP_907156.1| hypothetical protein MUL_3536 [Mycobacterium ulcerans Agy99] gi|118570934|gb|ABL05685.1| conserved hypothetical integral membrane protein [Mycobacterium ulcerans Agy99] Length=427 Score = 626 bits (1615), Expect = 2e-177, Method: Compositional matrix adjust. Identities = 340/426 (80%), Positives = 370/426 (87%), Gaps = 0/426 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS R+P+VGSRLGR +W LLWL+A ALGYVAWRLFGH PYRIDIDIYQMG +AWLDG Sbjct 1 MSTLRSPDVGSRLGRVSVWYLLWLVAAAALGYVAWRLFGHIPYRIDIDIYQMGGQAWLDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLY G V FHTPIGL+LPFTYPPL+AV+FSPFAWL MPAASVAIT LTLV+L AST +V Sbjct 61 RPLYSGDVKFHTPIGLDLPFTYPPLSAVVFSPFAWLHMPAASVAITFLTLVVLTASTVVV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD WP S +P PA LRRLWLAV+IVAPA++WLEPISSNFAFGQIN VLMTLVI+DC Sbjct 121 LTALDVWPNSEQLPGPAWLRRLWLAVIIVAPASLWLEPISSNFAFGQINAVLMTLVILDC 180 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 FPRRTPWPRGL+LGLGIALKLTPAVFLLYFLLRRD RAALTA+ASF VATL GF LAW D Sbjct 181 FPRRTPWPRGLLLGLGIALKLTPAVFLLYFLLRRDNRAALTAVASFVVATLAGFALAWHD 240 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWT TL HTDRIG+AALNTDQNIAGALARL IG+ LWV SL VLA T+WAMR Sbjct 241 SWEYWTDTLLHTDRIGSAALNTDQNIAGALARLPIGEHASHLLWVLLSLGVLAVTVWAMR 300 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 RVLRA EP+LAVICVALFGLVVSPVSWSHHWVWMLPAV+V G+L WRRRNVALA++++AG Sbjct 301 RVLRAEEPSLAVICVALFGLVVSPVSWSHHWVWMLPAVVVTGVLAWRRRNVALAVVTIAG 360 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 + LMRW+PIDLLP+HRE TA WWRQLAGMSYVWWALAVIVVAGLTVT RMT QR Sbjct 361 LALMRWSPIDLLPKHREATAAWWRQLAGMSYVWWALAVIVVAGLTVTTRMTMQRPAEPDR 420 Query 421 TPAPTA 426 TPAP A Sbjct 421 TPAPAA 426 >gi|254819750|ref|ZP_05224751.1| hypothetical protein MintA_07494 [Mycobacterium intracellulare ATCC 13950] Length=409 Score = 597 bits (1539), Expect = 1e-168, Method: Compositional matrix adjust. Identities = 307/389 (79%), Positives = 339/389 (88%), Gaps = 1/389 (0%) Query 35 WRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFA 94 W+LFGH PYRIDID+YQMGARAW+DGRPLY G VLFHTPI ++LPFTYPPLAA++F PFA Sbjct 18 WQLFGHIPYRIDIDVYQMGARAWMDGRPLYRGDVLFHTPI-VDLPFTYPPLAAIVFCPFA 76 Query 95 WLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATI 154 W+ MPAASVAIT LTLVLL+ ST IVLT LD W S ++P PA LRR WLAV+ A AT+ Sbjct 77 WMHMPAASVAITALTLVLLVVSTVIVLTRLDVWSASVVLPGPAWLRRWWLAVVAAAAATV 136 Query 155 WLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRR 214 WLEPISSNFAFGQINVVLMTLVI DC PRRTPWPRGL+LG+G+ALKLTPAVFLLYFLLRR Sbjct 137 WLEPISSNFAFGQINVVLMTLVIADCVPRRTPWPRGLLLGVGMALKLTPAVFLLYFLLRR 196 Query 215 DGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLT 274 D RAALTALASFA ATLLGFVLAW DSWEYWTHT+HHTDRIG+A+LNTDQNIAGALARL Sbjct 197 DHRAALTALASFAGATLLGFVLAWNDSWEYWTHTVHHTDRIGSASLNTDQNIAGALARLG 256 Query 275 IGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWM 334 +G ERF LWVA SLLVLAAT+WAMRRVLRAGEPTLA++CVALFGLVVSPVSWSHHWVW+ Sbjct 257 LGQQERFLLWVAASLLVLAATVWAMRRVLRAGEPTLALVCVALFGLVVSPVSWSHHWVWV 316 Query 335 LPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWW 394 LPAVLV +LGWRRRN L ++S GV LMRWTPIDLLP+H E +AVWWRQLAGMSYVWW Sbjct 317 LPAVLVTAVLGWRRRNALLMVVSAVGVALMRWTPIDLLPKHHEASAVWWRQLAGMSYVWW 376 Query 395 ALAVIVVAGLTVTARMTPQRSLTRGLTPA 423 ALAVIV AG+TVTAR + + L PA Sbjct 377 ALAVIVAAGVTVTARGISREAAPEPLAPA 405 >gi|336461903|gb|EGO40756.1| Protein of unknown function (DUF2029) [Mycobacterium avium subsp. paratuberculosis S397] Length=428 Score = 575 bits (1481), Expect = 7e-162, Method: Compositional matrix adjust. Identities = 320/425 (76%), Positives = 354/425 (84%), Gaps = 5/425 (1%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLA---GVALGYVAWRLFGHTPYRIDIDIYQMGARAW 57 MS +AP G G+R W L W LA ALGY AW+LFGHTPYRIDID+YQMGARAW Sbjct 1 MSTRQAPGAGFP-GKRPGWALWWGLAWLTAAALGYAAWQLFGHTPYRIDIDVYQMGARAW 59 Query 58 LDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIAST 117 +DGRPLY G VLFHTPI ++LPFTYPPLAA++F PFAW+ M ASVAIT LTLVLL+ ST Sbjct 60 MDGRPLYRGDVLFHTPI-VDLPFTYPPLAAIVFCPFAWMHMRTASVAITALTLVLLVVST 118 Query 118 AIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVI 177 IVL LD W TS L+P PA LRR WLAV++ A ATIWLEPISSNFAFGQINVVLMTLVI Sbjct 119 VIVLARLDVWSTSALLPGPAWLRRWWLAVVVAAAATIWLEPISSNFAFGQINVVLMTLVI 178 Query 178 VDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLA 237 DC PRRTPWPRGL+LGLG+ALKLTPAVFLLYFLLRRD RA LTALASFA ATLLGFVLA Sbjct 179 ADCLPRRTPWPRGLLLGLGMALKLTPAVFLLYFLLRRDHRAVLTALASFAGATLLGFVLA 238 Query 238 WRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIW 297 + DSWEYWTHT+HHTDRIG+A+LNTDQNIAGALARL + R LWVA SLLVLA T+ Sbjct 239 YTDSWEYWTHTVHHTDRIGSASLNTDQNIAGALARLGLAQQPRSLLWVAASLLVLAVTVC 298 Query 298 AMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLS 357 AMRRVLRA EPTLA++CVALFGLVVSPVSWSHHWVW+LP VLV G+LGWRRRN AL +LS Sbjct 299 AMRRVLRADEPTLALVCVALFGLVVSPVSWSHHWVWVLPTVLVTGVLGWRRRNAALLVLS 358 Query 358 LAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLT 417 + GV LMRWTPIDLLP+H E +AVWWRQLAGMSYVWWALAVIV AG+TVTAR + + Sbjct 359 VVGVALMRWTPIDLLPKHHEASAVWWRQLAGMSYVWWALAVIVAAGVTVTARAASRDAAP 418 Query 418 RGLTP 422 + LTP Sbjct 419 QQLTP 423 >gi|296166045|ref|ZP_06848494.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898610|gb|EFG78167.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=430 Score = 572 bits (1473), Expect = 6e-161, Method: Compositional matrix adjust. Identities = 323/427 (76%), Positives = 358/427 (84%), Gaps = 0/427 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS WRAP GS+ G+ +LWC LWL+A LGYVAW+LFG TPYRIDID+YQMGA+AW+ G Sbjct 4 MSRWRAPGAGSKPGQVLLWCGLWLVAAAGLGYVAWQLFGQTPYRIDIDVYQMGAQAWMQG 63 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 LY G VLFHTPIGLNLPFTYPPLAA++F PFAWLQMPAASVAIT LTLVLL+ ST +V Sbjct 64 HSLYHGDVLFHTPIGLNLPFTYPPLAAIVFCPFAWLQMPAASVAITALTLVLLVVSTVVV 123 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD W S +P PA LRR WLAV+I AT+WLEP++SNFAFGQINVVLMTLVI DC Sbjct 124 LTRLDVWAASAALPGPAGLRRWWLAVMIAVGATMWLEPVTSNFAFGQINVVLMTLVIADC 183 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTPWPRGL+LGLGIALKLTPAVFLLYFLLRRD RAALTALASF AT +GFVLAW D Sbjct 184 MPRRTPWPRGLLLGLGIALKLTPAVFLLYFLLRRDNRAALTALASFVAATAVGFVLAWSD 243 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWTHTLHHTDRIG A LNTDQNIAGALARL +G+ +RF LWV SLLVLA T+WAMR Sbjct 244 SWEYWTHTLHHTDRIGEAGLNTDQNIAGALARLGLGEQQRFLLWVGASLLVLALTVWAMR 303 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 R+LRA EP LAV+CVALFGLVVSPVSWSHHWVW LP V+V+ +L WRRRNVALA++ +AG Sbjct 304 RMLRADEPVLAVVCVALFGLVVSPVSWSHHWVWGLPTVVVLAVLAWRRRNVALAVVGVAG 363 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGL 420 V LMRW+PIDLLP+H E TAVWWRQLAGMSYVWWALAV++ AGLTVTAR RS L Sbjct 364 VALMRWSPIDLLPKHHEATAVWWRQLAGMSYVWWALAVLLAAGLTVTARTASGRSAPEQL 423 Query 421 TPAPTAS 427 TP A Sbjct 424 TPVTAAG 430 >gi|254774985|ref|ZP_05216501.1| hypothetical protein MaviaA2_09974 [Mycobacterium avium subsp. avium ATCC 25291] Length=406 Score = 569 bits (1466), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 313/400 (79%), Positives = 345/400 (87%), Gaps = 1/400 (0%) Query 23 WLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTY 82 WL A ALGY AW+LFGHTPYRIDID+YQMGARAW+DGRPLY G VLFHTPI ++LPFTY Sbjct 3 WLTAAAALGYAAWQLFGHTPYRIDIDVYQMGARAWMDGRPLYRGDVLFHTPI-VDLPFTY 61 Query 83 PPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRL 142 PPLAA++F PFAW+ MP ASVAIT LTLVLL+ ST IVL LD W TS L+P PA LRR Sbjct 62 PPLAAIVFCPFAWMHMPTASVAITALTLVLLVVSTVIVLARLDVWSTSALLPGPAWLRRW 121 Query 143 WLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLT 202 WLAV++ A ATIWLEPISSNFAFGQINVVLMTLVI DC PRRTPWPRGL+LGLG+ALKLT Sbjct 122 WLAVVVAAAATIWLEPISSNFAFGQINVVLMTLVIADCLPRRTPWPRGLLLGLGMALKLT 181 Query 203 PAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNT 262 PAVFLLYFLLRRD RA LTALASFA ATLLGFVLA+ DSWEYWTHT+HHTDRIG+A+LNT Sbjct 182 PAVFLLYFLLRRDHRAVLTALASFAGATLLGFVLAYTDSWEYWTHTVHHTDRIGSASLNT 241 Query 263 DQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVV 322 DQNIAGALARL + R LWVA SLLVLA T+WAMRRVLRA EPTLA++CVALFGLVV Sbjct 242 DQNIAGALARLGLAQQPRSLLWVAASLLVLAVTVWAMRRVLRADEPTLALVCVALFGLVV 301 Query 323 SPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW 382 SPVSWSHHWVW+LP VLV G+LGWRRRN AL +LS+ GV LMRWTPIDLLP+H E +AVW Sbjct 302 SPVSWSHHWVWVLPTVLVTGVLGWRRRNAALLVLSVVGVALMRWTPIDLLPKHHEASAVW 361 Query 383 WRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTP 422 WRQLAGMSYVWWALAVIV AG+TVTAR + + + LTP Sbjct 362 WRQLAGMSYVWWALAVIVAAGVTVTARAASRDAAPQQLTP 401 >gi|41408017|ref|NP_960853.1| hypothetical protein MAP1919 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396372|gb|AAS04236.1| hypothetical protein MAP_1919 [Mycobacterium avium subsp. paratuberculosis K-10] Length=429 Score = 568 bits (1464), Expect = 7e-160, Method: Compositional matrix adjust. Identities = 322/426 (76%), Positives = 356/426 (84%), Gaps = 6/426 (1%) Query 1 MSAWRAPEVGSRLGRRVLWCLLW----LLAGVALGYVAWRLFGHTPYRIDIDIYQMGARA 56 MS +AP G G+R W L W L A ALGY AW+LFGHTPYRIDID+YQMGARA Sbjct 1 MSTRQAPGAGFP-GKRPGWALWWGLAWLTAAAALGYAAWQLFGHTPYRIDIDVYQMGARA 59 Query 57 WLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIAS 116 W+DGRPLY G VLFHTPI ++LPFTYPPLAA++F PFAW+ MP ASVAIT LTLVLL+ S Sbjct 60 WMDGRPLYRGDVLFHTPI-VDLPFTYPPLAAIVFCPFAWMHMPTASVAITALTLVLLVVS 118 Query 117 TAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLV 176 T IVL LD W TS L+P PA LRR WLAV++ A ATIWLEPISSNFAFGQINVVLMTLV Sbjct 119 TVIVLARLDVWSTSALLPGPAWLRRWWLAVVVAAAATIWLEPISSNFAFGQINVVLMTLV 178 Query 177 IVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVL 236 I DC PRRTPWPRGL+LGLG+ALKLTPAVFLLYFLLRRD RA LTALASFA ATLLGFVL Sbjct 179 IADCLPRRTPWPRGLLLGLGMALKLTPAVFLLYFLLRRDHRAVLTALASFAGATLLGFVL 238 Query 237 AWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATI 296 A+ DSWEYWTHT+HHTDRIG+A+LNTDQNIAGALARL + R LWVA SLLVLA T+ Sbjct 239 AYTDSWEYWTHTVHHTDRIGSASLNTDQNIAGALARLGLAQQPRSLLWVAASLLVLAVTV 298 Query 297 WAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAML 356 WAMRRVLRA EPTLA++CVALFGLVVSPVSWSHHWVW+LP VLV G+LGWRRRN AL +L Sbjct 299 WAMRRVLRADEPTLALVCVALFGLVVSPVSWSHHWVWVLPTVLVTGVLGWRRRNAALLVL 358 Query 357 SLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSL 416 S+ GV LMRWTPIDLLP+H E +AVWWRQLAGMSYVWWALAVIV AG+TVTAR + + Sbjct 359 SVVGVALMRWTPIDLLPKHHEASAVWWRQLAGMSYVWWALAVIVAAGVTVTARAASRDAA 418 Query 417 TRGLTP 422 + LTP Sbjct 419 PQQLTP 424 >gi|118466800|ref|YP_881517.1| hypothetical protein MAV_2312 [Mycobacterium avium 104] gi|118168087|gb|ABK68984.1| conserved hypothetical protein [Mycobacterium avium 104] Length=390 Score = 564 bits (1454), Expect = 9e-159, Method: Compositional matrix adjust. Identities = 303/386 (79%), Positives = 335/386 (87%), Gaps = 1/386 (0%) Query 37 LFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWL 96 +FGHTPYRIDID+YQMGARAW+DGRPLY G VLFHTPI ++LPFTYPPLAA++F PFAW+ Sbjct 1 MFGHTPYRIDIDVYQMGARAWMDGRPLYRGDVLFHTPI-VDLPFTYPPLAAIVFCPFAWM 59 Query 97 QMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWL 156 MP ASVAIT LTLVLL+ ST IVL LD W TS L+P PA LRR WLAV++ A ATIWL Sbjct 60 HMPTASVAITALTLVLLVVSTVIVLARLDVWSTSALLPGPAWLRRWWLAVVVAAAATIWL 119 Query 157 EPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDG 216 EPISSNFAFGQINVVLMTLVI DC PRRTPWPRGL+LGLG+ALKLTPAVFLLYFLLRRD Sbjct 120 EPISSNFAFGQINVVLMTLVIADCLPRRTPWPRGLLLGLGMALKLTPAVFLLYFLLRRDH 179 Query 217 RAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIG 276 RA LTALASFA ATLLGFVLA+ DSWEYWTHT+HHTDRIG+A+LNTDQNIAGALARL + Sbjct 180 RAVLTALASFAGATLLGFVLAYTDSWEYWTHTVHHTDRIGSASLNTDQNIAGALARLGLA 239 Query 277 DDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLP 336 R LWVA SLLVLA T+WAMRRVLRA EPTLA++CVALFGLVVSPVSWSHHWVW+LP Sbjct 240 QQPRSLLWVAASLLVLAVTVWAMRRVLRADEPTLALVCVALFGLVVSPVSWSHHWVWVLP 299 Query 337 AVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWAL 396 VLV G+LGWRRRN AL +LS+ GV LMRWTPIDLLP+H E +AVWWRQLAGMSYVWWAL Sbjct 300 TVLVTGVLGWRRRNAALLVLSVVGVALMRWTPIDLLPKHHEASAVWWRQLAGMSYVWWAL 359 Query 397 AVIVVAGLTVTARMTPQRSLTRGLTP 422 AVIV AG+TVTAR + + + LTP Sbjct 360 AVIVAAGVTVTARAASRDAAPQQLTP 385 >gi|342859891|ref|ZP_08716544.1| hypothetical protein MCOL_13468 [Mycobacterium colombiense CECT 3035] gi|342133023|gb|EGT86243.1| hypothetical protein MCOL_13468 [Mycobacterium colombiense CECT 3035] Length=407 Score = 545 bits (1404), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 296/388 (77%), Positives = 334/388 (87%), Gaps = 1/388 (0%) Query 35 WRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFA 94 W+LFGHTPYRIDID+YQMGARAW+DG PLY G VLFHTPI ++LPFTYPPLAA++F PFA Sbjct 16 WQLFGHTPYRIDIDVYQMGARAWMDGHPLYRGDVLFHTPI-VDLPFTYPPLAAIVFCPFA 74 Query 95 WLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATI 154 W+ MP ASVAIT LTLVLL+ ST I+LT LD W TS ++P PA +RR WLA++ A AT+ Sbjct 75 WMHMPTASVAITALTLVLLVVSTVILLTRLDVWSTSAVLPGPAWVRRWWLAIVAAAAATV 134 Query 155 WLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRR 214 WLEP+SSNFAFGQINVVLMTLVI DC PRRTPWPRGL+LGLG+ALKLTPAVFLLYFLLRR Sbjct 135 WLEPVSSNFAFGQINVVLMTLVIADCLPRRTPWPRGLLLGLGMALKLTPAVFLLYFLLRR 194 Query 215 DGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLT 274 D RAALTALASFA ATLLGF LAW DS EYWTHTL HTDRIG+A+LNTDQNIAGALARL Sbjct 195 DNRAALTALASFAGATLLGFALAWNDSLEYWTHTLLHTDRIGSASLNTDQNIAGALARLG 254 Query 275 IGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWM 334 +G ER LWVA SLLVLA T+WAMRRVL A EPTLA++CVALFGLVVSPVSWSHHWVW+ Sbjct 255 LGQQERSLLWVAASLLVLAVTVWAMRRVLHADEPTLALVCVALFGLVVSPVSWSHHWVWV 314 Query 335 LPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWW 394 LPAVLV G++GWRRRN AL ++S+ GV LMRW+PIDLLP+H E +AVWWRQLAGMSYVWW Sbjct 315 LPAVLVTGIVGWRRRNAALLVVSVIGVALMRWSPIDLLPKHHEASAVWWRQLAGMSYVWW 374 Query 395 ALAVIVVAGLTVTARMTPQRSLTRGLTP 422 ALAVIV G+TVTAR + + + L P Sbjct 375 ALAVIVTVGVTVTARGVARDAAPQQLAP 402 >gi|120404515|ref|YP_954344.1| putative integral membrane protein [Mycobacterium vanbaalenii PYR-1] gi|119957333|gb|ABM14338.1| putative conserved integral membrane protein [Mycobacterium vanbaalenii PYR-1] Length=428 Score = 475 bits (1223), Expect = 6e-132, Method: Compositional matrix adjust. Identities = 257/391 (66%), Positives = 296/391 (76%), Gaps = 17/391 (4%) Query 33 VAWRLF----------------GHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGL 76 +AWRLF GH PYRIDID+Y+MG RAWLDG+ LY G +F T GL Sbjct 16 LAWRLFQLLTFAALAAAAWRLLGHVPYRIDIDVYRMGGRAWLDGQSLYADGAMFQTRGGL 75 Query 77 NLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAP 136 LPFTYPPLAAV F+PFA L + AASVAIT+ TL+LL+ ST IVLT LD WP++R+ P Sbjct 76 ELPFTYPPLAAVAFAPFALLSLEAASVAITLTTLILLLVSTVIVLTRLDVWPSTRVTSEP 135 Query 137 ARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLG 196 A LRR WLA IVAPA ++LEP+ +NF FGQINVVLMTLVI DC PRRTPWPRG++LG+ Sbjct 136 AWLRRCWLAAAIVAPAVLYLEPLRANFDFGQINVVLMTLVIADCVPRRTPWPRGVLLGVA 195 Query 197 IALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG 256 IA+KLTPAVFLLYFLLRRD RA L AS VATL GF LAWRDSWEYW T+ +TDRIG Sbjct 196 IAVKLTPAVFLLYFLLRRDVRALLVTAASAVVATLAGFALAWRDSWEYWLETVRNTDRIG 255 Query 257 AAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVA 316 A LNT+QNIAG LARL +G+ ERF +W VL T+WA RR LRA +P LA+ICVA Sbjct 256 TATLNTNQNIAGVLARLGLGEGERFVVWTVLCFAVLGLTVWAARRALRAEQPVLALICVA 315 Query 317 LFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHR 376 +FGLVVSPVSWSHHWVW LP VLV +L R R+VALA++S AG+ LM WTPI LLP+HR Sbjct 316 MFGLVVSPVSWSHHWVWALPTVLVTAVLAVRLRHVALAVVSAAGLALMVWTPITLLPEHR 375 Query 377 ETTAVWWRQLAGMSYVWWALAVIVVAGLTVT 407 ETTA WRQL G SY+WWALAVIVV+ TVT Sbjct 376 ETTASLWRQLVGGSYLWWALAVIVVSA-TVT 405 >gi|118468966|ref|YP_888524.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|294958196|sp|A0R036.1|PIMG_MYCS2 RecName: Full=Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase; AltName: Full=Alpha-D-mannose-alpha-(1-2)-mannosyltransferase; AltName: Full=Alpha-mannosyltransferase; Short=Alpha-manT; AltName: Full=PPM-dependent mannosyltransferase; AltName: Full=Polyprenol-phosphate-mannose alpha-mannosyltransferase; Short=PPM alpha-mannosyltransferase gi|118170253|gb|ABK71149.1| probable conserved integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=440 Score = 474 bits (1220), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 263/416 (64%), Positives = 304/416 (74%), Gaps = 8/416 (1%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS ++P G+ L + W + LL + +V WRL G PYRIDID+Y+MG RAWLDG Sbjct 4 MSKRQSPR-GAGLAPTIAWRVFQLLTLAGVLWVGWRLLGRVPYRIDIDVYRMGGRAWLDG 62 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 RPLY G +FHT GL+LPFTYPPLAA+ F+PFAWL +P AS AIT TLVLLI +T IV Sbjct 63 RPLYADGAIFHTQGGLDLPFTYPPLAAIAFAPFAWLSLPLASSAITATTLVLLIVATTIV 122 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD WP + + PA +RR WLA +VAPA I+LEPI SNF FGQINVVLMTLVI DC Sbjct 123 LTRLDVWPHTTVTSEPAWMRRAWLAAAMVAPAVIYLEPIRSNFEFGQINVVLMTLVIADC 182 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTPWPRGL+LGL IALKLTPAVFLLYFLLRRD L A+ VA+L GF LAW D Sbjct 183 VPRRTPWPRGLLLGLAIALKLTPAVFLLYFLLRRDIHTLLRTAATAVVASLAGFALAWSD 242 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 S EYWT T+ +TDRIG A LNT+QNIAGALARL +G+ RF LWV VLA T+WA R Sbjct 243 SVEYWTETVRNTDRIGTATLNTNQNIAGALARLGLGESPRFILWVLACFAVLALTVWAAR 302 Query 301 RVLRAGE-------PTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVAL 353 R LR P LA++CVALFGLVVSPVSWSHHWVWMLP ++V +L +RRR+V Sbjct 303 RALRGDTADQTTEAPVLALVCVALFGLVVSPVSWSHHWVWMLPVLVVTAVLAYRRRSVWF 362 Query 354 AMLSLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTAR 409 L+ AG+ L WTPI LLP+HRETTA WRQLAG SYVWWA AVIVV GL ++R Sbjct 363 TALTAAGLALTVWTPITLLPEHRETTASLWRQLAGGSYVWWAFAVIVVIGLVSSSR 418 >gi|145223555|ref|YP_001134233.1| hypothetical protein Mflv_2968 [Mycobacterium gilvum PYR-GCK] gi|145216041|gb|ABP45445.1| putative conserved integral membrane protein [Mycobacterium gilvum PYR-GCK] Length=430 Score = 474 bits (1219), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 267/411 (65%), Positives = 303/411 (74%), Gaps = 1/411 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS R+P G+ G R+LW L LL AL A RL GH PYRIDID+Y+MG RAWLDG Sbjct 1 MSNRRSPG-GAGWGPRLLWRLFQLLTLAALVIAASRLLGHVPYRIDIDVYRMGGRAWLDG 59 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 R LY G +F T GL LPFTYPPLAAV FSPFA L + AAS+AIT TLVLL+ ST IV Sbjct 60 RSLYADGAMFQTRGGLELPFTYPPLAAVAFSPFAMLSLEAASLAITATTLVLLLVSTVIV 119 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD WPT+ + PA +RR WLA IVAPA I+ EPI +NF FGQINVVLMTLV+ DC Sbjct 120 LTRLDVWPTTGVTREPAWVRRCWLAAAIVAPAVIFCEPIRANFDFGQINVVLMTLVLADC 179 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTP PRG++LGL IA+KLTPAVFLLYFLLRRD RA L AS VATL GF AW D Sbjct 180 VPRRTPCPRGVLLGLAIAVKLTPAVFLLYFLLRRDTRALLVTAASVVVATLAGFAFAWSD 239 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWT T+ +TDRIG A LNT+QNIAGALARL +G+D RF LWVA VLA T+WA R Sbjct 240 SWEYWTETVRNTDRIGTATLNTNQNIAGALARLGLGEDARFLLWVALCFAVLALTVWAAR 299 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 R LRA +P LA+I VA+FGLVVSPVSWSHHWVWMLP V+V +L R R+ L ++ G Sbjct 300 RALRADQPVLALISVAMFGLVVSPVSWSHHWVWMLPTVVVTAVLAVRLRHALLGAVATLG 359 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMT 411 +VLM W+PI LLP+HRETTA WRQL G SY+WWALAVIV G R T Sbjct 360 LVLMVWSPITLLPEHRETTAALWRQLVGGSYLWWALAVIVAIGTVTLHRDT 410 >gi|315443902|ref|YP_004076781.1| hypothetical protein Mspyr1_23010 [Mycobacterium sp. Spyr1] gi|315262205|gb|ADT98946.1| Protein of unknown function (DUF2029) [Mycobacterium sp. Spyr1] Length=430 Score = 472 bits (1215), Expect = 5e-131, Method: Compositional matrix adjust. Identities = 266/411 (65%), Positives = 302/411 (74%), Gaps = 1/411 (0%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS R+P G+ G R+LW L LL AL A RL GH PYRIDID+Y+MG RAWLDG Sbjct 1 MSNRRSPG-GAGWGPRLLWRLFQLLTLAALVIAASRLLGHVPYRIDIDVYRMGGRAWLDG 59 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 R LY G +F T GL LPFTYPPLAAV FSPFA L + AAS+AIT TLVLL+ ST IV Sbjct 60 RSLYADGAMFQTRGGLELPFTYPPLAAVAFSPFAMLSLEAASLAITATTLVLLLVSTVIV 119 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD WPT+ + PA +RR WLA IVAPA I+ EPI +NF FGQINVVLMTLV+ DC Sbjct 120 LTRLDVWPTTGVTREPAWVRRCWLAAAIVAPAVIFCEPIRANFDFGQINVVLMTLVLADC 179 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTP PRG++LGL IA+KLTPAVFLLYFLLRRD RA L AS VATL GF AW D Sbjct 180 VPRRTPCPRGVLLGLAIAVKLTPAVFLLYFLLRRDTRALLVTAASVVVATLAGFAFAWSD 239 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWT T+ +TDRIG A LNT+QNIAGALARL +G+D RF LWVA VLA T+WA R Sbjct 240 SWEYWTETVRNTDRIGTATLNTNQNIAGALARLGLGEDARFLLWVALCFAVLALTVWAAR 299 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 R LRA +P LA+I VA+FGLVVSPVSWSHHWVWMLP V+V +L R R+ L ++ G Sbjct 300 RALRADQPVLALISVAMFGLVVSPVSWSHHWVWMLPTVVVTAVLAVRLRHALLGAVATLG 359 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMT 411 +VLM W+PI LLP+HRETTA WRQL G SY+WWALAVI G R T Sbjct 360 LVLMVWSPITLLPEHRETTAALWRQLVGGSYLWWALAVIAAIGTVTLHRDT 410 >gi|108800242|ref|YP_640439.1| hypothetical protein Mmcs_3276 [Mycobacterium sp. MCS] gi|119869370|ref|YP_939322.1| hypothetical protein Mkms_3338 [Mycobacterium sp. KMS] gi|108770661|gb|ABG09383.1| putative conserved integral membrane protein [Mycobacterium sp. MCS] gi|119695459|gb|ABL92532.1| putative conserved integral membrane protein [Mycobacterium sp. KMS] Length=418 Score = 458 bits (1179), Expect = 6e-127, Method: Compositional matrix adjust. Identities = 260/411 (64%), Positives = 299/411 (73%), Gaps = 14/411 (3%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS R P L R CLL L ALG+ WRL G TPYRIDID+Y+MG RAWLDG Sbjct 1 MSTRRTPAWAPTLAWRTF-CLLTL---AALGWAGWRLLGETPYRIDIDVYRMGGRAWLDG 56 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 PLY G +F T GL+LPFTYPPLAA++FSPFA + +PAAS IT +TL+LLI + IV Sbjct 57 SPLYADGAMFATEGGLDLPFTYPPLAAIVFSPFAVMSLPAASAVITAITLLLLIVAVLIV 116 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD W R R+WLA IVAPA + LEPI +NF FGQINVVLMTLVI DC Sbjct 117 LTRLDVWTPGR---------RIWLAAAIVAPAVVLLEPIRANFDFGQINVVLMTLVIADC 167 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTPWPRG++LG+ IALKLTPAVFLLYFLLRRD RA L + AS V TLLGF LAWRD Sbjct 168 VPRRTPWPRGVLLGVAIALKLTPAVFLLYFLLRRDTRALLVSAASVVVMTLLGFALAWRD 227 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWT T+ +TDRIG A LNT+QNIAG LAR +G+D RF LWV G VL T+WA R Sbjct 228 SWEYWTETVRNTDRIGTATLNTNQNIAGTLARFGVGEDLRFILWVVGCFAVLGLTVWAAR 287 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 R LRA EP LA++CVA+FGLVVSPVSWSHHWVW LP VLV ++ +R R+ LA+ G Sbjct 288 RALRADEPVLALVCVAMFGLVVSPVSWSHHWVWSLPTVLVTLVVAYRTRHAVLAVAGALG 347 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMT 411 LM W+PI LLP+H+ET+A WRQLAG SYVWWAL VI AG T++AR T Sbjct 348 CALMVWSPITLLPEHQETSAPLWRQLAGGSYVWWALLVIAAAG-TLSARST 397 >gi|126435865|ref|YP_001071556.1| hypothetical protein Mjls_3287 [Mycobacterium sp. JLS] gi|126235665|gb|ABN99065.1| putative conserved integral membrane protein [Mycobacterium sp. JLS] Length=418 Score = 452 bits (1164), Expect = 4e-125, Method: Compositional matrix adjust. Identities = 261/411 (64%), Positives = 300/411 (73%), Gaps = 14/411 (3%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 MS R P L R CLL L ALG+ WRL G TPYRIDID+Y+MG RAWLDG Sbjct 1 MSTRRTPAWAPTLAWRTF-CLLTL---AALGWAGWRLLGETPYRIDIDVYRMGGRAWLDG 56 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 PLY G +F T GL+LPFTYPPLAA++FSPFA + +PAAS IT +TL+LLI + IV Sbjct 57 SPLYADGAMFATEGGLDLPFTYPPLAAIVFSPFAVMSLPAASAVITAITLLLLIVAVLIV 116 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDC 180 LT LD W R R+WLA IVAPA + LEPI +NF FGQINVVLMTLVI DC Sbjct 117 LTRLDVWTPGR---------RIWLAAAIVAPAVVLLEPIRANFDFGQINVVLMTLVIADC 167 Query 181 FPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRD 240 PRRTPWPRG++LG+ IALKLTPAVFLLYFLLRRD RA L + AS V TLLGF LAWRD Sbjct 168 VPRRTPWPRGVLLGVAIALKLTPAVFLLYFLLRRDTRALLVSAASVVVMTLLGFALAWRD 227 Query 241 SWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMR 300 SWEYWT T+ +TDRIG A LNT+QNIAG LAR +G+D RF LWV G VL T+WA R Sbjct 228 SWEYWTETVRNTDRIGTATLNTNQNIAGTLARFGVGEDLRFILWVVGCFAVLGLTVWAAR 287 Query 301 RVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAG 360 R LRA EP LA++CVA+FGLVVSPVSWSHHWVW LP VLV ++ +R R+ ALA+ G Sbjct 288 RALRADEPVLALVCVAMFGLVVSPVSWSHHWVWSLPTVLVTLVVAYRTRHAALAVAGALG 347 Query 361 VVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTVTARMT 411 LM W+PI LLP+H+ET+A WRQLAG SYVWWAL VI AG T++AR T Sbjct 348 CALMVWSPITLLPEHQETSAPLWRQLAGGSYVWWALLVIAAAG-TLSARST 397 >gi|333990362|ref|YP_004522976.1| hypothetical protein JDM601_1721 [Mycobacterium sp. JDM601] gi|333486329|gb|AEF35721.1| integral membrane protein [Mycobacterium sp. JDM601] Length=428 Score = 427 bits (1097), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 253/420 (61%), Positives = 301/420 (72%), Gaps = 9/420 (2%) Query 1 MSAWRAPEVGSRLGRRVLWCLLWLLAGVALGYVAWRLFGHTPYRIDIDIYQMGARAWLDG 60 M+ R PE G R G +W + LLA ALGY WR G TPY ID+D+Y+M A+AW DG Sbjct 1 MTTSRPPEPGRRHGGGSVWWIFALLAIGALGYTTWRALGSTPYHIDVDVYRMAAQAWRDG 60 Query 61 RPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIV 120 +PLYG G LPFTYPP+AAVLF+P W+ + + + A+T+++ +LL+ S +V Sbjct 61 KPLYGDAWFPTQIDGTVLPFTYPPIAAVLFAPLTWVSLGSGTAALTIVSTLLLVVSITVV 120 Query 121 LTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWL--EPISSNFAFGQINVVLMTLVIV 178 L GL P RR LA IVA A IWL EPI SNF FGQ+N VLMTLVI Sbjct 121 LAGLGV--AVGRGSGPQWWRRGVLAAAIVA-AAIWLDAEPIWSNFDFGQVNAVLMTLVIA 177 Query 179 DCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAW 238 DC PRRT WPRG +LGL +ALKLTPAVFLLYFLLRRDGRAA+T +ASF VATL GFVLAW Sbjct 178 DCVPRRTYWPRGALLGLAVALKLTPAVFLLYFLLRRDGRAAVTTVASFLVATLAGFVLAW 237 Query 239 RDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWA 298 DSW+YWTHT+ +TDRIG A LNT+QN+AGALARL + D +R ALW+ GSLLVLA T+WA Sbjct 238 SDSWQYWTHTVRNTDRIGGATLNTNQNLAGALARLPLSDHQRSALWLLGSLLVLAVTVWA 297 Query 299 MRRVLR--AGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAML 356 RR+L GEP LA+ICVALFGLVVSPVSWSHHWVWMLP V+V ++ +R R +AL +L Sbjct 298 ARRLLSRDVGEPILALICVALFGLVVSPVSWSHHWVWMLPTVVVTAVVAYRHRAIALGVL 357 Query 357 SLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYVWWALAVIVVAGLTV--TARMTPQR 414 S GV LM +PIDLLP+H E A WWRQLAG SYVWW LAVI+ AG T+ R TP + Sbjct 358 SALGVALMMRSPIDLLPEHHEAGAAWWRQLAGTSYVWWGLAVIITAGATLRPDRRSTPDQ 417 >gi|111018127|ref|YP_701099.1| integral membrane protein [Rhodococcus jostii RHA1] gi|110817657|gb|ABG92941.1| possible conserved integral membrane protein [Rhodococcus jostii RHA1] Length=440 Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 175/394 (45%), Positives = 243/394 (62%), Gaps = 15/394 (3%) Query 30 LGYVAWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVL 89 LG R FG + YR+D+D+Y++G +L G LYG + T +G LPFTYPPLAAV+ Sbjct 51 LGLPGLRDFG-SYYRLDLDVYRLGGSVFLHGPTLYGS--MPATQMGNFLPFTYPPLAAVV 107 Query 90 FSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIV 149 FSP + + + A +TVL+L+ L + L L P + LV W A+ + Sbjct 108 FSPLSTVSLSTAGTVVTVLSLIALFGVLVVTLDSLGIAPRTTLV---------WTALGAL 158 Query 150 APATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLY 209 A ++ LEP+SS +GQIN++LM LV DC P++TPWPRG+++GL A+KLTPAVF+LY Sbjct 159 A-VSMALEPVSSTLDYGQINILLMLLVGADCLPKKTPWPRGVLIGLAAAVKLTPAVFILY 217 Query 210 FLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGA 269 FL+R+D R+A+ SF + +G + W DS YWTHTL +DRIG A +Q+I G Sbjct 218 FLVRKDFRSAVVTAVSFLAFSAVGAIATWNDSVTYWTHTLFDSDRIGTPAYPANQSITGV 277 Query 270 LARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSH 329 LARL + D R +W+ S++VLA I AM R L++GE LA+ A+ GL+VSPVSWSH Sbjct 278 LARLGLSDSVRTPIWLLLSVVVLALVILAMVRALQSGETALALGLNAVLGLLVSPVSWSH 337 Query 330 HWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLA 387 HWVW +P +LV+G+L +RRR+VALA+ ++ GVV++R L R + W W Q Sbjct 338 HWVWSVPVILVLGVLAYRRRSVALAVTAVVGVVVVRLAAHWKLGVGRWSGTHWNLWDQFL 397 Query 388 GMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLT 421 SYVWW LAV++VA R + R T Sbjct 398 ASSYVWWGLAVVLVAMFAFRTRRSQSDEDDRSET 431 >gi|325676950|ref|ZP_08156622.1| integral membrane protein [Rhodococcus equi ATCC 33707] gi|325552250|gb|EGD21940.1| integral membrane protein [Rhodococcus equi ATCC 33707] Length=437 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 169/385 (44%), Positives = 228/385 (60%), Gaps = 18/385 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y ID+D+Y++G + G PLYG L T G +LPFTYPPLAAV+F+P +W+ + AA Sbjct 63 YHIDLDVYRLGGAVFAAGDPLYGE--LPPTFFGQHLPFTYPPLAAVVFAPMSWISLQAAG 120 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 +TVL+L L+A+ + L + P + LV W A+ A A LEP+SS Sbjct 121 AVLTVLSLAALVATLVLALASVGVRPRTTLV---------WTALGGAAAALT-LEPVSST 170 Query 163 FAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTA 222 F +GQ+N++LM V DC ++TPWPRG+++G A+KLTPAVF+LYFL R+D RAA+T Sbjct 171 FDYGQVNILLMVFVAADCLMKKTPWPRGILIGFVAAVKLTPAVFILYFLFRKDFRAAVTT 230 Query 223 LASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFA 282 SF +GF++A DSWEYWT TL + RIG A +Q++ G LARL + R Sbjct 231 GTSFVAFGAIGFLVARADSWEYWTETLFDSSRIGGPAYPANQSLTGVLARLGLDPSMRTV 290 Query 283 LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIG 342 LW+ S+ VLA AM R AG P +A+ ALFGL+VSPVSWSHHWVW+ P ++V+ Sbjct 291 LWLVLSVAVLALAAVAMHRAFAAGLPVVALFVNALFGLLVSPVSWSHHWVWVAPLLVVLA 350 Query 343 LLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLAGMSYVWWALAVIV 400 + +RRR+V L A VL P L R W W Q SYVWWALAV++ Sbjct 351 VAAYRRRSVVLGAAVAASFVLFVLAPHWELGIGRWDGTGWPLWDQFLASSYVWWALAVMI 410 Query 401 VAGLTVTARMTPQRSLTRGLTPAPT 425 L++ R L G+ +PT Sbjct 411 AVTLSLGRRA----RLRAGVADSPT 431 >gi|312140168|ref|YP_004007504.1| integral membrane protein [Rhodococcus equi 103S] gi|311889507|emb|CBH48824.1| putative integral membrane protein [Rhodococcus equi 103S] Length=436 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 168/385 (44%), Positives = 228/385 (60%), Gaps = 18/385 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y ID+D+Y++G + G PLYG L T G +LPFTYPPLAAV+F+P +W+ + AA Sbjct 62 YHIDLDVYRLGGAVFAAGDPLYGE--LPPTFFGQHLPFTYPPLAAVVFAPMSWISLQAAG 119 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 +TVL+L L+A+ + L + P + LV W A+ A A + LEP+SS Sbjct 120 AVLTVLSLAALVATLVLALASVGVRPRTTLV---------WTALGGAA-AALTLEPVSST 169 Query 163 FAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTA 222 F +GQ+N++LM V DC ++TPWPRG+++G A+KLTPAVF+LYFL R+D RAA+T Sbjct 170 FDYGQVNILLMVFVAADCLMKKTPWPRGILIGFVAAVKLTPAVFILYFLFRKDFRAAVTT 229 Query 223 LASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFA 282 SF +GF++A DSWEYWT TL + RIG A +Q++ G LARL + R Sbjct 230 GTSFVAFGAIGFLVARADSWEYWTETLFDSSRIGGPAYPANQSLTGVLARLGLDPSMRTV 289 Query 283 LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIG 342 LW+ S+ VLA AM R AG P +A+ ALFGL+VSPVSWSHHWVW+ P ++V+ Sbjct 290 LWLVLSVAVLALAAVAMHRAFAAGLPVVALFVNALFGLLVSPVSWSHHWVWVAPLLVVLA 349 Query 343 LLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLAGMSYVWWALAVIV 400 + +RRR+V L A VL P L R W W Q SYV WALAV++ Sbjct 350 VAAYRRRSVVLGAAVAASFVLFVLAPHWELGVGRWDGTGWPLWDQFLASSYVSWALAVMI 409 Query 401 VAGLTVTARMTPQRSLTRGLTPAPT 425 L++ R L G+ +PT Sbjct 410 AVTLSLGRRA----RLRAGVADSPT 430 >gi|226360256|ref|YP_002778034.1| mannosyltransferase [Rhodococcus opacus B4] gi|226238741|dbj|BAH49089.1| mannosyltransferase [Rhodococcus opacus B4] Length=445 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 179/388 (47%), Positives = 243/388 (63%), Gaps = 22/388 (5%) Query 24 LLAGVALGYV-------AWRLFGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGL 76 +LAG+A+G+ R FG YR+D+D+Y++G +L G LYG + T +G Sbjct 43 VLAGLAVGFAYNLLGLPGLRDFGFY-YRLDLDVYRLGGSVFLHGPTLYGS--MPATQMGN 99 Query 77 NLPFTYPPLAAVLFSPFAWLQMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAP 136 LPFTYPPLAAV+FSP + + + A +TVL+L+ L + L L P S LV Sbjct 100 FLPFTYPPLAAVVFSPLSTVSLATAGTVVTVLSLLALFGVLVVTLDSLGTAPRSTLV--- 156 Query 137 ARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLG 196 W A+ +A A + LEP+SS +GQIN++LM LV DC P++TPWPRGL++GL Sbjct 157 ------WTALGALAVA-MALEPVSSTLDYGQINILLMLLVAADCLPKKTPWPRGLLIGLA 209 Query 197 IALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG 256 A+KLTPAVF+LYFL+R+D RAA+ SF + +G + W DS YWTHTL +DRIG Sbjct 210 AAVKLTPAVFILYFLVRKDFRAAVGTAISFLAFSAVGAIATWNDSVTYWTHTLFDSDRIG 269 Query 257 AAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVA 316 A +Q+I G LARL + D R +W+ S++VL + AM R LRAGE LA+ A Sbjct 270 TPAYPANQSITGVLARLGLSDGMRTPVWLLLSVVVLGLVVVAMVRALRAGETALALGLNA 329 Query 317 LFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHR 376 + GL+VSPVSWSHHWVW +P VLV+G+L +RRR+ ALA+ ++ GVV++R L R Sbjct 330 VLGLLVSPVSWSHHWVWSVPVVLVLGVLAYRRRSAALAVTAVVGVVVVRLAAHWKLGVGR 389 Query 377 ETTAVW--WRQLAGMSYVWWALAVIVVA 402 + W W Q SYVWW LAV++VA Sbjct 390 WSGTHWNLWDQFVASSYVWWGLAVVLVA 417 >gi|326383222|ref|ZP_08204910.1| hypothetical protein SCNU_09809 [Gordonia neofelifaecis NRRL B-59395] gi|326197972|gb|EGD55158.1| hypothetical protein SCNU_09809 [Gordonia neofelifaecis NRRL B-59395] Length=435 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 155/383 (41%), Positives = 214/383 (56%), Gaps = 26/383 (6%) Query 45 IDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASVA 104 +D+ +Y+MGAR WLDG LYG L G LPFTYPPLAA+ FSPFA + AA Sbjct 65 LDLHVYRMGARLWLDGESLYGPTPLVD---GHALPFTYPPLAAIAFSPFAIIPTAAADAL 121 Query 105 ITVLTLVLLIASTAIVLTGLDAWPT-SRLVPAPARLRRLWLAVLIVAPATIWLEPISSNF 163 + LTL + GL W +RL P + R W V+ ++EP+ Sbjct 122 MFALTLAAV---------GLTLWMVLARLAPRMNLIDR-WTVVIGGTAIAEFIEPVRQTL 171 Query 164 AFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTAL 223 ++GQIN VLM L+ D R WPRGL++G+ +++KLTPA FLLYFLLRRD R A T + Sbjct 172 SYGQINAVLMALIAFDILCRHPRWPRGLLIGVAVSIKLTPAGFLLYFLLRRDWRGAATMV 231 Query 224 ASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFAL 283 A A + +++ DS +YW HTL T RIGA +Q+I GA+ R +G+ AL Sbjct 232 AGTVGAVAVAWLVMPADSAKYWFHTLGETGRIGAPYYAGNQSIKGAVFRFGLGEGVSTAL 291 Query 284 WVA-GSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV-I 341 W+A +L V+ A +W M R+L AG+ A++ A L+VSPVSWSHHW W+ PA+LV + Sbjct 292 WIALSALTVVLAAVW-MHRLLAAGQQATALLVNAAAVLLVSPVSWSHHWTWVAPALLVAV 350 Query 342 GLLGWRRRNVALAMLSLAGVVLMRWTPIDLLP--QHRETTAVWWRQLAGMSYVWWALAVI 399 + RR L ++ V+ P LLP E WW+++ G +YVW+ +AV+ Sbjct 351 YAITTRRFGWPLVATTVLATVVFAVGPHWLLPGGHDAELGWTWWQRIVGDAYVWFTVAVL 410 Query 400 VVAGLT-------VTARMTPQRS 415 VV + TA TP R+ Sbjct 411 VVGAVRWRPTAALETADRTPVRA 433 >gi|25028631|ref|NP_738685.1| hypothetical protein CE2075 [Corynebacterium efficiens YS-314] gi|23493917|dbj|BAC18885.1| putative membrane protein [Corynebacterium efficiens YS-314] Length=855 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 135/316 (43%), Positives = 184/316 (59%), Gaps = 23/316 (7%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y ID D+Y+ GA+A+LDG LY + G+ LPFTYPP+AAV+F+P + Sbjct 98 YHIDSDVYRAGAQAFLDGLNLYEQDYVVG---GIQLPFTYPPIAAVVFTPLLLVPSSTMG 154 Query 103 VAITVLTLVLLIASTAIVLT----GLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEP 158 V +T+L+ VL+ AIVL G+ + SRL L + PA ++ EP Sbjct 155 VLLTLLSAVLMWWCIAIVLRRVIRGISTY-DSRLF------------ALFILPAALFTEP 201 Query 159 ISSNFAFGQINVVLMTLVIVDCFPRRTPW-PRGLMLGLGIALKLTPAVFLLYFLLRRDGR 217 ++ FGQIN++LMTLV++D F R+ PW PRG +GL A+KLTPAVF LYFL++RD + Sbjct 202 VNQTLQFGQINILLMTLVLMDTFTRK-PWLPRGFWIGLAAAIKLTPAVFGLYFLVKRDWK 260 Query 218 AALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGD 277 A+T++AS TLL F L S +YWT TL RIG + T+Q+I G +RL Sbjct 261 GAITSIASGVGFTLLAFALLPSSSVQYWTETLSDPSRIGNLSYITNQSIRGMFSRLMHER 320 Query 278 DERFAL-WVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLP 336 + L W+A +LVL AM RVLRAG V+ +L L+ SPVSWSHHWVW++P Sbjct 321 QDVVELIWMASVVLVLIGVTIAMVRVLRAGSVHGTVLLNSLIALLCSPVSWSHHWVWLIP 380 Query 337 AVLVIGLLGWRRRNVA 352 L W +R+ A Sbjct 381 ITLGFAAGAWSQRDSA 396 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 58/217 (27%), Positives = 101/217 (47%), Gaps = 18/217 (8%) Query 157 EPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDG 216 EP+ S G + +V++ L++ D R+ PRGL+ GL + P + ++ L+R Sbjct 599 EPVQSALQMGSLTLVVLALILTDLVAPRSVLPRGLLTGLTAGITGWPVLIIVALFLQRRV 658 Query 217 RAALTALASFAVATLLGFVLA--WRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLT 274 RAA+TA + V ++G++LA R + T+H GA + ++AG LAR Sbjct 659 RAAVTAALTAVVLWVVGWLLAPSGRSTLLDVQTTVHD----GA----DNASLAGFLARWI 710 Query 275 IGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWM 334 +WV ++ LA WA+ G+ TL+ + + P +++ WV Sbjct 711 SDSPVIMIIWV---VIALAVGAWAVYHTHATGDVTLSATIAIAWPAIALPTVYAYMWVLF 767 Query 335 LPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDL 371 +P LV+ LL R + A + L+ W P+ + Sbjct 768 IP--LVVLLL---TRGRVFSAFLWAFIALVNWVPVQV 799 >gi|259507690|ref|ZP_05750590.1| membrane protein [Corynebacterium efficiens YS-314] gi|259164737|gb|EEW49291.1| membrane protein [Corynebacterium efficiens YS-314] Length=837 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 133/312 (43%), Positives = 184/312 (59%), Gaps = 15/312 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y ID D+Y+ GA+A+LDG LY + G+ LPFTYPP+AAV+F+P + Sbjct 80 YHIDSDVYRAGAQAFLDGLNLYEQDYVVG---GIQLPFTYPPIAAVVFTPLLLVPSSTMG 136 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 V +T+L+ VL+ AIVL R++ + A+ I+ PA ++ EP++ Sbjct 137 VLLTLLSAVLMWWCIAIVL--------RRVIRGISTYDSRLFALFIL-PAALFTEPVNQT 187 Query 163 FAFGQINVVLMTLVIVDCFPRRTPW-PRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQIN++LMTLV++D F R+ PW PRG +GL A+KLTPAVF LYFL++RD + A+T Sbjct 188 LQFGQINILLMTLVLMDTFTRK-PWLPRGFWIGLAAAIKLTPAVFGLYFLVKRDWKGAIT 246 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 ++AS TLL F L S +YWT TL RIG + T+Q+I G +RL + Sbjct 247 SIASGVGFTLLAFALLPSSSVQYWTETLSDPSRIGNLSYITNQSIRGMFSRLMHERQDVV 306 Query 282 AL-WVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV 340 L W+A +LVL AM RVLRAG V+ +L L+ SPVSWSHHWVW++P L Sbjct 307 ELIWMASVVLVLIGVTIAMVRVLRAGSVHGTVLLNSLIALLCSPVSWSHHWVWLIPITLG 366 Query 341 IGLLGWRRRNVA 352 W +R+ A Sbjct 367 FAAGAWSQRDSA 378 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 58/217 (27%), Positives = 101/217 (47%), Gaps = 18/217 (8%) Query 157 EPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDG 216 EP+ S G + +V++ L++ D R+ PRGL+ GL + P + ++ L+R Sbjct 581 EPVQSALQMGSLTLVVLALILTDLVAPRSVLPRGLLTGLTAGITGWPVLIIVALFLQRRV 640 Query 217 RAALTALASFAVATLLGFVLA--WRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLT 274 RAA+TA + V ++G++LA R + T+H GA + ++AG LAR Sbjct 641 RAAVTAALTAVVLWVVGWLLAPSGRSTLLDVQTTVHD----GA----DNASLAGFLARWI 692 Query 275 IGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWM 334 +WV ++ LA WA+ G+ TL+ + + P +++ WV Sbjct 693 SDSPVIMIIWV---VIALAVGAWAVYHTHATGDVTLSATIAIAWPAIALPTVYAYMWVLF 749 Query 335 LPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDL 371 +P LV+ LL R + A + L+ W P+ + Sbjct 750 IP--LVVLLL---TRGRVFSAFLWAFIALVNWVPVQV 781 >gi|262202428|ref|YP_003273636.1| hypothetical protein Gbro_2502 [Gordonia bronchialis DSM 43247] gi|262085775|gb|ACY21743.1| Protein of unknown function DUF2029 [Gordonia bronchialis DSM 43247] Length=414 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 142/366 (39%), Positives = 210/366 (58%), Gaps = 18/366 (4%) Query 42 PYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAA 101 P+RID D+Y+ GA+A+LDG LY L G +LPFTYPP+AAVLF+ F + A Sbjct 41 PFRIDFDVYRTGAQAFLDGHRLYEN--LPALSEGTHLPFTYPPIAAVLFTVFTIVPGWAG 98 Query 102 SVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISS 161 S +T ++ LL+ + +VL +R++ PA WL + A A + L P+ Sbjct 99 SAILTAGSIGLLMVTLYVVL--------ARVIDRPAT-DIAWLMLPFTALA-LCLGPVRD 148 Query 162 NFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQ+N+ LMTLV+VD R W RGL+ GL IA+KLTP VF+L+F+LRRD RAA+ Sbjct 149 TLNFGQVNIALMTLVVVDALVGRGRWWRGLLTGLAIAVKLTPLVFVLFFVLRRDRRAAIV 208 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 ++A+ +GF+LA DS +YWT +L TDRIG+ + +Q+I G L RL I + Sbjct 209 SVAAALALHGIGFLLAPTDSVKYWTDSLFDTDRIGSPIFSNNQSINGELHRLGI---DST 265 Query 282 ALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVI 341 A+W+ +LLV W R+++AG A++ VA L SP+SW HWVW+ P ++V+ Sbjct 266 AVWLVLALLVGLFIAWVAWRLIQAGSEVGALLAVAFSALYCSPLSWDQHWVWVAPLLMVM 325 Query 342 GLLGWRRRN-VALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLAGMSYVWWALAV 398 + R R +A L ++G V+ P +P+ E W + + G S++ W L Sbjct 326 TVWSVRTRAPIAWTALLVSGFVIFVVMPHQRVPRRFEAELDWTFTQHIIGSSFLIWGLVA 385 Query 399 IVVAGL 404 + V G+ Sbjct 386 LAVLGV 391 >gi|54022539|ref|YP_116781.1| hypothetical protein nfa5720 [Nocardia farcinica IFM 10152] gi|54014047|dbj|BAD55417.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=427 Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 150/371 (41%), Positives = 210/371 (57%), Gaps = 25/371 (6%) Query 45 IDIDIYQMGARAWLDGRPLYGGGVLFHTPI-GLNLPFTYPPLAAVLFSPFAWLQMPAASV 103 ID+ +Y+ GAR WLDG LYG P+ G+ LPFTYPPLAA+ F+P A + + A V Sbjct 56 IDLQVYRNGARVWLDGGELYGP----MPPVYGIGLPFTYPPLAALFFAPLALMPLVLAEV 111 Query 104 AITVLTLVLLIASTAIVLTGLDAWPTSRLVPA--PARLRRLWLAVLIVAPATIWLEPISS 161 + +L L + +VL +RL P P + L +A + +A ++LEP+ Sbjct 112 VVLATSLGCLGLTLWLVL--------ARLRPGLDPRTMTTLVIAAVALA---LYLEPVRQ 160 Query 162 NFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 F FGQIN+VLM V +DC R+ WPRG+++G+ +++KL PA FLLYFLLRRD +AA T Sbjct 161 TFGFGQINLVLMAAVALDCLVRKPFWPRGMLIGITVSIKLIPAGFLLYFLLRRDWKAAGT 220 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 + S A LGF+L DS EYW TL T RIG +Q++ G RL + D Sbjct 221 MVVSAIGAVGLGFLLFPSDSAEYWLRTLADTGRIGPPYFAGNQSLKGLAFRLGVPDSAAT 280 Query 282 ALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVI 341 +W+ +++ +A M R++ AG+ A++ A L+VSPVSWSHHW+W+ PA+LV Sbjct 281 LIWLGLAVIAVALAALWMHRLIEAGQSVAALLVNAAAILLVSPVSWSHHWIWVAPALLVA 340 Query 342 --GLLGWRRRNVALAMLS---LAGVVLMRWTPIDLLPQ--HRETTAVWWRQLAGMSYVWW 394 +L R + +L+ A VL P LLP RE WW+Q+ G YV Sbjct 341 VDAILRRRAGRRPVRLLTATVAALTVLYLIGPQWLLPHSNDRELDWAWWQQIVGSGYVLV 400 Query 395 ALAVIVVAGLT 405 AV+VVA LT Sbjct 401 TFAVLVVAALT 411 >gi|344044850|gb|EGV40525.1| hypothetical protein CgS9114_08076 [Corynebacterium glutamicum S9114] Length=812 Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 128/322 (40%), Positives = 189/322 (59%), Gaps = 15/322 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 + ID D+Y+ GA A+L G LY +H + LPFTYPP++A LF P A L A Sbjct 61 FHIDTDVYRAGANAFLHGENLYTQD--YHVG-SIQLPFTYPPISAALFVPLAILASSVAG 117 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 +A+T+++ VLL S AIVL R++ +++ LI+ P + EP+ Sbjct 118 IALTLISTVLLWWSVAIVL--------RRVLKGLTDADSRFVSYLIL-PMALSTEPVFQT 168 Query 163 FAFGQINVVLMTLVIVDCFPRRTPW-PRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQ+N++LM LV++D F ++ PW PRG +GL ++KLTPAVF LYFL+++D + A Sbjct 169 LQFGQVNIILMALVLMDTFTKK-PWLPRGFWIGLAASIKLTPAVFGLYFLVKKDWKGAGV 227 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 A+AS + L F+L+ S YWT TL+ RIG + +Q++ G L+R+ + Sbjct 228 AIASGVGFSALAFILSPSSSKIYWTETLNDPSRIGNLSYIANQSVRGTLSRMMHEQQDLV 287 Query 282 A-LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV 340 LW+ +L LAA AM RV+RAG P AV+ +L L+ SPVSWSHHWVW++P + Sbjct 288 EKLWLVAVVLCLAAVAVAMWRVVRAGNPYGAVMLNSLIALLCSPVSWSHHWVWLIPIAIG 347 Query 341 IGLLGWRRRNVALAMLSLAGVV 362 +G W +R A + + AGV+ Sbjct 348 LGASAWNQRRTAPGIAATAGVL 369 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 0/100 (0%) Query 137 ARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLG 196 A + WL L + + + FG + +V + L+ VD R RGL+ GL Sbjct 525 AAKKSSWLIYLSTVAVALMMFSVQDALQFGSLTLVALALITVDVLSVREIGRRGLLTGLA 584 Query 197 IALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVL 236 AL P + ++ FL+ R A +T + + AV +LG +L Sbjct 585 AALFGWPILIVIGFLIHRRYAATITTIVTAAVLWILGILL 624 >gi|145296142|ref|YP_001138963.1| hypothetical protein cgR_2062 [Corynebacterium glutamicum R] gi|140846062|dbj|BAF55061.1| hypothetical protein [Corynebacterium glutamicum R] Length=812 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 127/322 (40%), Positives = 188/322 (59%), Gaps = 15/322 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 + ID D+Y+ GA A+L G LY + + LPFTYPP++A LF P A L A Sbjct 61 FHIDTDVYRAGANAFLHGENLYTQD---YQVGSIQLPFTYPPISAALFVPLAILASSVAG 117 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 +A+T+++ VLL S AIVL R++ +++ LI+ P + EP+ Sbjct 118 IALTLISTVLLWWSVAIVL--------RRVLKGLTDADSRFVSYLIL-PMALSTEPVFQT 168 Query 163 FAFGQINVVLMTLVIVDCFPRRTPW-PRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQ+N++LM LV++D F ++ PW PRG +GL ++KLTPAVF LYFL+++D + A Sbjct 169 LQFGQVNIILMALVLMDTFTKK-PWLPRGFWIGLAASIKLTPAVFGLYFLVKKDWKGAGV 227 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 A+AS + L F+L+ S YWT TL+ RIG + +Q++ G L+R+ + Sbjct 228 AIASGVGFSALAFILSPSSSKIYWTETLNDPSRIGNLSYIANQSVRGTLSRMMHEQQDLV 287 Query 282 A-LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV 340 LW+ +L LAA AM RV+RAG P AV+ +L L+ SPVSWSHHWVW++P + Sbjct 288 EKLWLVAVVLCLAAVAVAMWRVVRAGNPYGAVMLNSLIALLCSPVSWSHHWVWLIPIAIG 347 Query 341 IGLLGWRRRNVALAMLSLAGVV 362 +G W +R A + + AGV+ Sbjct 348 LGASAWNQRRTAPGIAATAGVL 369 Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/97 (29%), Positives = 46/97 (48%), Gaps = 0/97 (0%) Query 140 RRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIAL 199 + WL L + + + FG + +V + L+ VD R RGL+ GL AL Sbjct 528 KSSWLIYLSTVAVALMMFSVQDALQFGSLTLVALALITVDVLSVREIGRRGLLTGLAAAL 587 Query 200 KLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVL 236 P + ++ FL+ R A +T + + AV +LG +L Sbjct 588 FGWPILIVIGFLIHRRYAATITTIVTAAVLWILGILL 624 >gi|19553382|ref|NP_601384.1| hypothetical protein NCgl2100 [Corynebacterium glutamicum ATCC 13032] gi|62391020|ref|YP_226422.1| hypothetical protein cg2393 [Corynebacterium glutamicum ATCC 13032] gi|41326359|emb|CAF20521.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032] Length=812 Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 127/322 (40%), Positives = 188/322 (59%), Gaps = 15/322 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 + ID D+Y+ GA A+L G LY + + LPFTYPP++A LF P A L A Sbjct 61 FHIDTDVYRAGANAFLHGENLYTQD---YQVGSIQLPFTYPPISAALFVPLAILASSVAG 117 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 +A+T+++ VLL S AIVL R++ +++ LI+ P + EP+ Sbjct 118 IALTLISTVLLWWSVAIVL--------RRVLKGLTDADSRFVSYLIL-PMALSTEPVFQT 168 Query 163 FAFGQINVVLMTLVIVDCFPRRTPW-PRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQ+N++LM LV++D F ++ PW PRG +GL ++KLTPAVF LYFL+++D + A Sbjct 169 LQFGQVNIILMALVLMDTFTKK-PWLPRGFWIGLAASIKLTPAVFGLYFLVKKDWKGAGV 227 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 A+AS + L F+L+ S YWT TL+ RIG + +Q++ G L+R+ + Sbjct 228 AIASGVGFSALAFILSPSSSKIYWTETLNDPSRIGNLSYIANQSVRGTLSRMMHEQQDLV 287 Query 282 A-LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV 340 LW+ +L LAA AM RV+RAG P AV+ +L L+ SPVSWSHHWVW++P + Sbjct 288 EKLWLVAVVLCLAAVAVAMWRVVRAGNPYGAVMLNSLIALLCSPVSWSHHWVWLIPIAIG 347 Query 341 IGLLGWRRRNVALAMLSLAGVV 362 +G W +R A + + AGV+ Sbjct 348 LGASAWNQRRTAPGIAATAGVL 369 >gi|21324950|dbj|BAB99573.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] Length=806 Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 127/322 (40%), Positives = 188/322 (59%), Gaps = 15/322 (4%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 + ID D+Y+ GA A+L G LY + + LPFTYPP++A LF P A L A Sbjct 55 FHIDTDVYRAGANAFLHGENLYTQD---YQVGSIQLPFTYPPISAALFVPLAILASSVAG 111 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 +A+T+++ VLL S AIVL R++ +++ LI+ P + EP+ Sbjct 112 IALTLISTVLLWWSVAIVL--------RRVLKGLTDADSRFVSYLIL-PMALSTEPVFQT 162 Query 163 FAFGQINVVLMTLVIVDCFPRRTPW-PRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQ+N++LM LV++D F ++ PW PRG +GL ++KLTPAVF LYFL+++D + A Sbjct 163 LQFGQVNIILMALVLMDTFTKK-PWLPRGFWIGLAASIKLTPAVFGLYFLVKKDWKGAGV 221 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 A+AS + L F+L+ S YWT TL+ RIG + +Q++ G L+R+ + Sbjct 222 AIASGVGFSALAFILSPSSSKIYWTETLNDPSRIGNLSYIANQSVRGTLSRMMHEQQDLV 281 Query 282 A-LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV 340 LW+ +L LAA AM RV+RAG P AV+ +L L+ SPVSWSHHWVW++P + Sbjct 282 EKLWLVAVVLCLAAVAVAMWRVVRAGNPYGAVMLNSLIALLCSPVSWSHHWVWLIPIAIG 341 Query 341 IGLLGWRRRNVALAMLSLAGVV 362 +G W +R A + + AGV+ Sbjct 342 LGASAWNQRRTAPGIAATAGVL 363 >gi|343927898|ref|ZP_08767364.1| putative mannosyltransferase [Gordonia alkanivorans NBRC 16433] gi|343762121|dbj|GAA14290.1| putative mannosyltransferase [Gordonia alkanivorans NBRC 16433] Length=425 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 150/383 (40%), Positives = 201/383 (53%), Gaps = 42/383 (10%) Query 42 PYRIDIDIYQMGARAWLDGRPLYG-----GGVLFHTPIGLNLPFTYPPLAAVLFSPFAWL 96 PYRID D+Y+MG R +LDG LYG GG G LPFTYPPLAA LFS F + Sbjct 46 PYRIDFDVYRMGGRVFLDGGDLYGTLPTLGG-------GSYLPFTYPPLAAALFSVFTVV 98 Query 97 QMPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATI-- 154 + T T+ L+ IV+ L +S L WLA A TI Sbjct 99 PLGLGQALFTAATIACLLVVCRIVVAHLTGRSSSDL---------WWLAT---AATTIGL 146 Query 155 WLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRR 214 WLEP+ FGQIN+VLMTLV+VD R W RGL++GL I++KLTPAVFLL F LRR Sbjct 147 WLEPVRDTLNFGQINIVLMTLVVVDALLGRGRWWRGLLVGLAISIKLTPAVFLLLFFLRR 206 Query 215 DGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLT 274 D RA + S +G++LA DS YWT TL T+RIG+ +Q++ G +ARL Sbjct 207 DWRALVVGAVSAVAYAGIGYLLAADDSVTYWTSTLFDTERIGSPQFANNQSVKGEVARLG 266 Query 275 IGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPT----------LAVICVALFGLVVSP 324 E +W +L+V W+ R+L A E + AV+ +A L SP Sbjct 267 F---ESELIWFGAALVVGLLIAWSAWRLLSASEASANGRDETLEVAAVMTIAFAWLFCSP 323 Query 325 VSWSHHWVWMLPAVLVIGLLGWRRRNVAL-AMLSLAGVVLMRWTPIDLLPQHR--ETTAV 381 V+W H WVW++P +LV+ L R + + G+++ + P +PQ E + Sbjct 324 VAWDHSWVWIVPLLLVLIALAARLEASRIWWWMVGTGLIIFAYAPHQHVPQRYDAELSWA 383 Query 382 WWRQLAGMSYVWWALAVIVVAGL 404 WW+ + G SY+ W L VIV G+ Sbjct 384 WWQHVIGSSYLVWGLVVIVSFGV 406 >gi|237785322|ref|YP_002906027.1| hypothetical protein ckrop_0723 [Corynebacterium kroppenstedtii DSM 44385] gi|237758234|gb|ACR17484.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length=498 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 140/435 (33%), Positives = 219/435 (51%), Gaps = 53/435 (12%) Query 27 GVALGYVAWRLFGHTPYR--IDIDIYQMGARAWLDGRPLYGGGVLFHTPI-GLNLPFTYP 83 G+ L Y + +FG +R ID+D+Y+ G +A++ G LY P+ G+NLPFTYP Sbjct 68 GLVLYYHFFDVFGDGEFRYHIDLDVYRSGGQAFVRGFGLYDRDY----PVRGINLPFTYP 123 Query 84 PLAAVLFSPFAWLQMPAASVAITVLTL--------VLLIASTAIVLTGLDAWPTSRLVPA 135 PLAA+LFS W + ++ + T VL+ T V T +++ Sbjct 124 PLAAILFSTLTWFSLTTDTLLMVFATAAMTWWCGAVLINHFTDPVRTSGADGKSAQQTMT 183 Query 136 PARLRRLWLAVLIVAPATIWLEPISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGL 195 + R WL+ +I+ P + EP + +FGQINV LM LV++D +RT WPRG+ +GL Sbjct 184 SSFKRAGWLSYMIL-PLVLLSEPFTHTLSFGQINVFLMALVLLDTAVKRTRWPRGIFIGL 242 Query 196 GIALKLTPAVFLLYFLLRRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRI 255 A+KLTPAVF L+FL+++D ++A+T S T +G+ + DS +YWT +H+ DRI Sbjct 243 AAAIKLTPAVFGLFFLVKKDWKSAITCALSGVAWTTIGWAILPHDSKDYWTVEIHNPDRI 302 Query 256 GAAALNTDQNIAGALARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEP------- 308 G A +Q++ G +AR T D + W+ S+L + AM R++R Sbjct 303 GGLAYAGNQSLRGMIARFTNDDTLQSRWWIVLSVLTFGLILTAMLRLIRTASKLHSDPVD 362 Query 309 -------------------TLAVI-CVALFGLVVSPVSWSHHWVWMLPAVLVIGLLGWRR 348 T+A++ +L L++SPVSWSHHWVW LP V+V W Sbjct 363 PGADNRLSATGPRYDGQSFTIALVAATSLVALLLSPVSWSHHWVWFLPFVIVTMNAAWNS 422 Query 349 R-------NVALAMLSLAGVVLMRWTPIDLLPQHRETTAVWW---RQLAGMSYVWWALAV 398 R N L ++++ G+++ TP + E + W +++ G YV W Sbjct 423 RHIIPRWQNNVLWVVAVVGLMISTVTPFHWFFPNSENQELQWSLIQKIVGSDYVLWGFLF 482 Query 399 IVVAGLTVTARMTPQ 413 ++ L A T + Sbjct 483 LIAMALFPRAFTTEK 497 >gi|319948991|ref|ZP_08023092.1| hypothetical protein ES5_06317 [Dietzia cinnamea P4] gi|319437346|gb|EFV92365.1| hypothetical protein ES5_06317 [Dietzia cinnamea P4] Length=428 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 142/372 (39%), Positives = 194/372 (53%), Gaps = 22/372 (5%) Query 42 PYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAA 101 PYRID+D+Y++G + + DG LYG L G +LPFTYPPL+A +FS + +P A Sbjct 42 PYRIDLDVYRVGGQVFRDGGELYG--ELPQLAQGAHLPFTYPPLSAQIFSLLTLVPLPVA 99 Query 102 SVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISS 161 S +T+ T+ +L +VLT R PAR LW V +W P+ Sbjct 100 SALVTLATIAVLALVVQLVLT--------RTCERPAR--ELWWLTAAVMVVALWFGPVRE 149 Query 162 NFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALT 221 FGQ+NV LM LV+VD R W G + GL +A+KLTPAVFLLYF LRRD R T Sbjct 150 TIGFGQVNVFLMALVLVDVILGRGRWWGGTLTGLAMAIKLTPAVFLLYFFLRRDWRGLAT 209 Query 222 ALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERF 281 A+ S T LG +LA DS YW+ + +RIG A ++Q++ G + RL + D Sbjct 210 AVVSALAFTGLGHLLAPDDSARYWSFAIRDPERIGGLAFTSNQSVNGVVYRLGLEDTAAS 269 Query 282 ALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLV- 340 +W + + W R+LR+G+ A + V L SPVSW HHWVW +PAV++ Sbjct 270 IVWFLVAATIGLGIAWVAWRLLRSGQEVAAAVAVGHVALFCSPVSWGHHWVWAVPAVVLA 329 Query 341 ------IGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVWW--RQLAGMSYV 392 G G R + L L+ +GVV+ TP +P W L G +Y+ Sbjct 330 LVWADRAGRRGDRDERLWLG-LAASGVVIFLATPQWWVPNSEGRELGWSPVEHLVGNAYL 388 Query 393 WWALAVIVVAGL 404 WAL +VV GL Sbjct 389 IWALVFLVVLGL 400 >gi|260577734|ref|ZP_05845669.1| membrane protein [Corynebacterium jeikeium ATCC 43734] gi|258604129|gb|EEW17371.1| membrane protein [Corynebacterium jeikeium ATCC 43734] Length=423 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 151/405 (38%), Positives = 211/405 (53%), Gaps = 51/405 (12%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y +D+D+Y++GA+ LDG+ LY G FH LPFTYPP++AVLF+P A MP Sbjct 47 YNLDLDVYRVGAQRVLDGQELYSGH--FHIIGDTYLPFTYPPISAVLFTPLA--VMPYH- 101 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRL---WLAVLIVAPATIWLEPI 159 L VLL+ +T V W + V + ARL R W++V++ A I L PI Sbjct 102 -----LAAVLLVCATVAV----TWWVLAHTVHSAARLDRSSAGWVSVVLTA-VLIHLSPI 151 Query 160 SSNFAFGQINVVLMTLVIVDCF--PRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGR 217 + A+GQINV+LM +V D PRR RGL+ G +A+KLTPAVF L+FLLR+D Sbjct 152 HTTLAYGQINVLLMGMVFADALVVPRRY---RGLLTGAAVAIKLTPAVFGLWFLLRKDWG 208 Query 218 AALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTI-G 276 + L A T L +++ RDS EYWTHTL T RIG +Q+I G L R + Sbjct 209 SILRMGAGTVGTTALAWLILPRDSLEYWTHTLRETGRIGNHEYALNQSINGLLYRFGLRT 268 Query 277 DDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLP 336 DD LWV + LA + M ++++ P +A+ +LF L+ SPVSW+HHW W Sbjct 269 DDSSSLLWVLLVCVSLAVIAFIMIKLMQVQAPIVALCVNSLFALLASPVSWNHHWSW--A 326 Query 337 AVLVIGLLGWRRRN------------VALAMLSLAGVVLMRWTPIDLLPQHRETTAVW-- 382 VL++ L + N V+L +L A + P +P + W Sbjct 327 PVLLVALACYAIANPTSPLASPRWLWVSLVVLGFAA---FAFEPTAFVPFQEQRELEWNA 383 Query 383 WRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 427 W+ L G SY+WW + ++V M + +L R TPA AS Sbjct 384 WQALLGNSYLWWTILALLV--------MAIRLALYRDKTPASGAS 420 >gi|340794108|ref|YP_004759571.1| hypothetical protein CVAR_1142 [Corynebacterium variabile DSM 44702] gi|340534018|gb|AEK36498.1| putative membrane protein [Corynebacterium variabile DSM 44702] Length=397 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/302 (41%), Positives = 165/302 (55%), Gaps = 9/302 (2%) Query 39 GHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQM 98 G PY ID D+Y+ G RA LD LY G T + LPFTYPPL+A+ F P A L + Sbjct 23 GGIPYHIDFDVYRGGGRAVLDDISLYEGVFSVGT---ITLPFTYPPLSALAFVPLAVLPL 79 Query 99 PAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEP 158 + T++++ ++ + IVL L +R LW A W+ P Sbjct 80 NVGQILFTLVSVATMVLTVVIVLAAL-----AREAGRGLSRGALWALGTGTALLATWMWP 134 Query 159 ISSNFAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRA 218 ++S FGQIN++LM LV+ D +TPWPRG ++GL ALKLTPAVF LYFLLRR R Sbjct 135 VASTLEFGQINILLMLLVVADLLLPKTPWPRGTLIGLAAALKLTPAVFGLYFLLRRQWRE 194 Query 219 ALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDD 278 A T+L S L + DS YWT T+ RIG + +Q+ G +AR T G+ Sbjct 195 AATSLISGIAFGALAWAFLPGDSHRYWTETVSDPTRIGGLMYSANQSWRGMVARFT-GEP 253 Query 279 ERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAV 338 + +W+ ++L AA + M R L G T AV +L L+ SPVSW+HHWVW++P Sbjct 254 AQTRIWMVLAVLTFAAVVVVMLRQLAVGAVTAAVCTNSLLALLASPVSWAHHWVWVVPMA 313 Query 339 LV 340 LV Sbjct 314 LV 315 >gi|256379510|ref|YP_003103170.1| hypothetical protein Amir_5506 [Actinosynnema mirum DSM 43827] gi|255923813|gb|ACU39324.1| hypothetical protein Amir_5506 [Actinosynnema mirum DSM 43827] Length=395 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 144/360 (40%), Positives = 198/360 (55%), Gaps = 25/360 (6%) Query 45 IDIDIYQMGARAWLDGRPLYGGGVLFHTPI-GLNLPFTYPPLAAVLFSPFAWLQMPAASV 103 +D+ +Y+ G AWL LY F P+ G PFTYPPLAA +FS FA + PAA Sbjct 33 LDLRVYRTGGEAWLRDLRLYADD--FPKPLDGPPFPFTYPPLAAAIFSLFALVPFPAA-- 88 Query 104 AITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNF 163 VL L +V+ L AW RR L +IV+ + LEP+ + F Sbjct 89 ---VLVWTTLGLVLLLVVCVLSAWHLY------GDARRALLVGVIVSIGALVLEPVWATF 139 Query 164 AFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTAL 223 FGQIN+V+M L +DC RT WPRGL++G A+KLTPAVF+L+FL R + LTA+ Sbjct 140 DFGQINLVIMGLAALDCLLPRTRWPRGLLIGFAAAIKLTPAVFVLFFLARGRWKPVLTAV 199 Query 224 ASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFAL 283 ASF L+G V+A+ D+ +YW HTL RIG +Q++ G + RL + Sbjct 200 ASFVGFGLVGAVVAFEDTKQYWFHTLLDPARIGELGYAGNQSLRGLVNRLGLTGAAESVA 259 Query 284 WVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPA-VLVIG 342 W+ SL V AA W R RA E A++ V++ L+ SPVSW+HHWVW++P VL++G Sbjct 260 WLLLSLGV-AALAWVAVR--RAREDVSALLAVSIAALLASPVSWTHHWVWVVPGLVLLVG 316 Query 343 LLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLAGMSYVWWALAVIV 400 +R+VA + + L W P+ LLP + W W+QL G SYV A+A +V Sbjct 317 -----QRSVAGWVTLVLVADLFVWAPLWLLPHDKGVEVGWNAWQQLVGNSYVLVAVAALV 371 >gi|68536591|ref|YP_251296.1| hypothetical protein jk1505 [Corynebacterium jeikeium K411] gi|68264190|emb|CAI37678.1| putative membrane protein [Corynebacterium jeikeium K411] Length=423 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 148/405 (37%), Positives = 208/405 (52%), Gaps = 51/405 (12%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y +D+D+Y++GA+ LDG+ LY G FH LPFTYPP++AVLF+P A MP Sbjct 47 YNLDLDVYRVGAQRVLDGQELYSGH--FHIIGDTYLPFTYPPISAVLFTPLA--VMPYH- 101 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRL---WLAVLIVAPATIWLEPI 159 L VLL+ +T V W + V + A L R W++V++ A I L PI Sbjct 102 -----LAAVLLVCATVAV----TWWVLAHTVHSAAHLDRSSAGWVSVVLTA-VLIHLSPI 151 Query 160 SSNFAFGQINVVLMTLVIVDCF--PRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGR 217 + A+GQINV+LM +V D PRR RGL+ G +A+KLTPAVF L+FLLR+D Sbjct 152 HTTLAYGQINVLLMGMVFADALVVPRRY---RGLLTGAAVAIKLTPAVFGLWFLLRKDWG 208 Query 218 AALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTI-G 276 + L A T L +++ RDS EYWTHTL T RIG +Q+I G L R + Sbjct 209 SILRMGAGTVGTTALAWLILPRDSLEYWTHTLRETGRIGNHEYALNQSINGLLYRFGLRT 268 Query 277 DDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLP 336 DD LWV + LA + M ++++ P +A+ +LF L+ SPVSW+HHW W Sbjct 269 DDSSSLLWVLLVCVSLAVIAFIMIKLMQVQAPIVALCVNSLFALLASPVSWNHHWSW--A 326 Query 337 AVLVIGLLGWRRRN------------VALAMLSLAGVVLMRWTPIDLLPQHRETTAVW-- 382 VL++ L + N V+L +L A + P +P + W Sbjct 327 PVLLVALACYAIANPTSPLASPRWLWVSLVVLGFAA---FAFEPTAFVPFQEQRELEWNA 383 Query 383 WRQLAGMSYVWWALAVIVVAGLTVTARMTPQRSLTRGLTPAPTAS 427 W+ L G SY+WW + ++V M + + R PA AS Sbjct 384 WQALLGNSYLWWTILALLV--------MAIRLATYRNKAPASEAS 420 >gi|326382536|ref|ZP_08204227.1| hypothetical protein SCNU_06340 [Gordonia neofelifaecis NRRL B-59395] gi|326198655|gb|EGD55838.1| hypothetical protein SCNU_06340 [Gordonia neofelifaecis NRRL B-59395] Length=467 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 145/385 (38%), Positives = 206/385 (54%), Gaps = 37/385 (9%) Query 38 FGHTPYRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQ 97 FG T R D+D+Y++G + W G LY G + T G+ LPFTYPP AA+LF+P + Sbjct 60 FG-TRTRFDMDVYRIGGQIWHQGFSLYADGSMPFTTDGIWLPFTYPPFAALLFTPLGAIP 118 Query 98 MPAASVAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLE 157 + AS+ I+++T LL+ T + L LD AR R WLA + + ATIW Sbjct 119 LSVASIGISLVTAALLVYVTKLSLAVLD---------IGARANRWWLATAL-SVATIWFN 168 Query 158 PISSNFAFGQINVVLMTLVIVDCF-----PRRTPWPRGLMLGLGIALKLTPAVFLLYFLL 212 P FGQINVVLM +++VD F RR +G+++G+ A+KLTP VFL FL+ Sbjct 169 PFWMTLGFGQINVVLMAMIMVDVFVLHRAGRRH--AQGVLIGIASAVKLTPLVFLGVFLV 226 Query 213 RRDGRAALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALAR 272 RA +T LA+F A +G++ DS YWT TL HT RIG +QN+ A R Sbjct 227 AGRLRAVVTGLAAFVGAAAIGWIWMPADSRTYWTDTLFHTARIGQPEGRINQNLNAAWLR 286 Query 273 LTIGDDERFA--LWVAGS--LLVLAATIWAMRRVLRAGEP--------TLAVIC-VALFG 319 + GD+ A W+ S LA R A P LAV C VA++G Sbjct 287 V-FGDNGGSAELAWIVSSVAATALALLAVLAARPTTAFAPGPMTGRVDALAVTCAVAVWG 345 Query 320 LVVSPVSWSHHWVWMLPAVLVIGLLGWR--RRNVALAMLSLAGV--VLMRWTPIDLLPQH 375 L+VSP +W+HHWVW +PA+L+ +G R RR + L+LAG+ V+ P LLP Sbjct 346 LLVSPTTWAHHWVWCIPALLLCLAIGARVKRRRYRITYLALAGIGAVIFAIGPFQLLPPI 405 Query 376 RETTAVWWRQLAGMSYVWWALAVIV 400 + W+ + G ++ W +A+++ Sbjct 406 EHGWSA-WQHIVGNAFTLWGVALLI 429 >gi|256394569|ref|YP_003116133.1| hypothetical protein Caci_5433 [Catenulispora acidiphila DSM 44928] gi|256360795|gb|ACU74292.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length=420 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 140/382 (37%), Positives = 206/382 (54%), Gaps = 32/382 (8%) Query 45 IDIDIYQMGARAWLDGRPLYGGGVLFHTPI-GLNLPFTYPPLAAVLFSPFAWLQMPAASV 103 ID+ +Y+ G +++ PLY F P+ G +LPFTYPP AAVLFS ++ A+V Sbjct 53 IDLKVYRDGGISFMKDLPLYT--TRFPHPLDGPDLPFTYPPFAAVLFSVLGFVGYHLAAV 110 Query 104 AITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNF 163 + ++ L + +VL +R +P P R+ + + ++ ++ +EPISS F Sbjct 111 LMVLIGFTALTWTIYLVLHNRAG---ARFLPEPTP--RVLVTITLL---SLVMEPISSTF 162 Query 164 AFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTAL 223 GQIN++LM LV+ D +T PRG + G+ A+KLTPAVFLLYF+ RR ++A + Sbjct 163 LHGQINLLLMGLVVTDALGPKTRIPRGALAGVAAAIKLTPAVFLLYFVARRQWKSASNMV 222 Query 224 ASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARL--------TI 275 A+F AT L +LA RDS YWT T+ RIG +Q++ G L RL ++ Sbjct 223 AAFIGATSLSIILAPRDSKAYWTATVFDPTRIGDLGYAANQSLRGGLHRLGGLPGLAMSV 282 Query 276 GDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWML 335 +ER LW A S++V+A RR +R +P A+ VA L++SPVSWSHHWVW+ Sbjct 283 KTEER--LWFALSMIVIALAYHGARRAIRREDPVCALAVVAACQLLISPVSWSHHWVWIA 340 Query 336 PAVLVIGLL---GWRRRNVALAMLSLAGVVLMRWTPIDLLPQHR--ETTAVWWRQLAGMS 390 P +L + G R +A ++ L V L+ P+ L P E WW L G + Sbjct 341 PMLLPFAIQIVRGGERLKIA-GLVVLTAVFLI--GPLLLFPVDHGLEMHWGWWENLIGDA 397 Query 391 YVWWALAVIVVAGLTVTARMTP 412 Y+ L+ +V A T R TP Sbjct 398 YLIITLSFVVWAAST---RRTP 416 >gi|227503261|ref|ZP_03933310.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|227075764|gb|EEI13727.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] Length=395 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 126/350 (36%), Positives = 187/350 (54%), Gaps = 28/350 (8%) Query 43 YRIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAAS 102 Y ID+D+Y+ G + G LY T ++LPFTYPP AA+LF+P W+ + AA+ Sbjct 42 YHIDLDVYREGGAGF--GSDLYNRDYFVGTDRNVSLPFTYPPFAALLFAPLQWIPLTAAA 99 Query 103 VAITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSN 162 V ITVL+++ L A+VL L+ + W A + A + EPI+ Sbjct 100 VVITVLSVLALWVCIALVLRTLNC--------------QQWAAWGLFA--AMLAEPITQT 143 Query 163 FAFGQINVVLMTLVIVDCFPRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRAALTA 222 F+FGQIN++L LV++D + RG++ G+ IA+KLTPAVFL F +RR+ +A T Sbjct 144 FSFGQINILLTALVVIDLLWVKKA--RGILTGIAIAIKLTPAVFLAVFFVRREWKAFFTT 201 Query 223 LASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIGAAALNTDQNIAGALARLTIGDDERFA 282 L SF A L+ F S EYWT TL ++RIG A + +Q++ G RL+ + E Sbjct 202 LGSFVAAGLIAFAANSHSSIEYWTSTLRDSERIGGLAYSANQSLRGLFTRLSPDNAE--T 259 Query 283 LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHHWVWMLPAVLVIG 342 LW+ G +V+A +AM R+ R + L ++ ++ L+ SPVSWSHH+ W++ A + Sbjct 260 LWLVGVFVVIAIVWFAMERLSRGNQVVLMLLAASV-SLLCSPVSWSHHFTWLVLAGI--- 315 Query 343 LLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVWWRQLAGMSYV 392 L RR V + LA W Q + T WW+ + G YV Sbjct 316 YLVASRRWVLAGLTWLALFARGHWQVPHTEDQELDWT--WWQHIVGNDYV 363 >gi|134103781|ref|YP_001109442.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133916404|emb|CAM06517.1| possible conserved integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=429 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 135/395 (35%), Positives = 207/395 (53%), Gaps = 33/395 (8%) Query 44 RIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASV 103 ID ++Y++GA+A L GR +YG L T GL+LPF YPP AA+LF+P A + A++ Sbjct 44 HIDGEVYRLGAKALLAGRDVYGD--LPATESGLSLPFIYPPFAAILFAPLALVPKVASTA 101 Query 104 AITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNF 163 AI +++ + L+ + ++L+ ++ LV A ++ L V P EP+ Sbjct 102 AIMLVSHLALLVTLYVLLSA-----STFLV---AHRDKVLLVTAAVLPLATVTEPVMETL 153 Query 164 AFGQINVVLMTLVIVDCF-----PRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRA 218 + QIN+VLM LV VDC RR P+PRGL++G+ LKLTPA FLL+ +LRRDGR Sbjct 154 TYAQINIVLMALVAVDCLWRVDGDRRLPYPRGLLIGIAAGLKLTPAAFLLFLVLRRDGRM 213 Query 219 ALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG--------AAALNTDQNIAGAL 270 +TA +F LLGF + + ++ E+WT + T + A +Q++ L Sbjct 214 IITAALTFVATALLGFAVTFANAREFWTREVFSTSNVSFGPKFTGDATVYAGNQSLRSLL 273 Query 271 ARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHH 330 +L G +V + +VLA + M +R + +AV + L+VSP+SWSHH Sbjct 274 TKL--GVPAPTVFFVLLAAVVLALAVAGMVHAIRQRDLPMAVTINGVLALLVSPISWSHH 331 Query 331 WVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLAG 388 WVW +PA+L++ + RR+ AL + + P +PQ + W + L G Sbjct 332 WVWAIPALLLLAGGAFTRRDWALLLATTLAAGFFTLGPHWKVPQGQGKELRWNFFEHLIG 391 Query 389 MSYVWWALAVIVVA------GLTVTARMTPQRSLT 417 SYV++ LA +V G A + PQ S T Sbjct 392 NSYVYFGLAFLVYCAALWWRGRRGAAAVQPQASAT 426 >gi|291005761|ref|ZP_06563734.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=431 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 135/395 (35%), Positives = 207/395 (53%), Gaps = 33/395 (8%) Query 44 RIDIDIYQMGARAWLDGRPLYGGGVLFHTPIGLNLPFTYPPLAAVLFSPFAWLQMPAASV 103 ID ++Y++GA+A L GR +YG L T GL+LPF YPP AA+LF+P A + A++ Sbjct 46 HIDGEVYRLGAKALLAGRDVYGD--LPATESGLSLPFIYPPFAAILFAPLALVPKVASTA 103 Query 104 AITVLTLVLLIASTAIVLTGLDAWPTSRLVPAPARLRRLWLAVLIVAPATIWLEPISSNF 163 AI +++ + L+ + ++L+ ++ LV A ++ L V P EP+ Sbjct 104 AIMLVSHLALLVTLYVLLSA-----STFLV---AHRDKVLLVTAAVLPLATVTEPVMETL 155 Query 164 AFGQINVVLMTLVIVDCF-----PRRTPWPRGLMLGLGIALKLTPAVFLLYFLLRRDGRA 218 + QIN+VLM LV VDC RR P+PRGL++G+ LKLTPA FLL+ +LRRDGR Sbjct 156 TYAQINIVLMALVAVDCLWRVDGDRRLPYPRGLLIGIAAGLKLTPAAFLLFLVLRRDGRM 215 Query 219 ALTALASFAVATLLGFVLAWRDSWEYWTHTLHHTDRIG--------AAALNTDQNIAGAL 270 +TA +F LLGF + + ++ E+WT + T + A +Q++ L Sbjct 216 IITAALTFVATALLGFAVTFANAREFWTREVFSTSNVSFGPKFTGDATVYAGNQSLRSLL 275 Query 271 ARLTIGDDERFALWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWSHH 330 +L G +V + +VLA + M +R + +AV + L+VSP+SWSHH Sbjct 276 TKL--GVPAPTVFFVLLAAVVLALAVAGMVHAIRQRDLPMAVTINGVLALLVSPISWSHH 333 Query 331 WVWMLPAVLVIGLLGWRRRNVALAMLSLAGVVLMRWTPIDLLPQHRETTAVW--WRQLAG 388 WVW +PA+L++ + RR+ AL + + P +PQ + W + L G Sbjct 334 WVWAIPALLLLAGGAFTRRDWALLLATTLAAGFFTLGPHWKVPQGQGKELRWNFFEHLIG 393 Query 389 MSYVWWALAVIVVA------GLTVTARMTPQRSLT 417 SYV++ LA +V G A + PQ S T Sbjct 394 NSYVYFGLAFLVYCAALWWRGRRGAAAVQPQASAT 428 Lambda K H 0.329 0.140 0.471 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 871320876120 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40