BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2183c Length=131 Score E Sequences producing significant alignments: (Bits) Value gi|15841673|ref|NP_336710.1| hypothetical protein MT2238 [Mycoba... 263 9e-69 gi|15609320|ref|NP_216699.1| hypothetical protein Rv2183c [Mycob... 261 2e-68 gi|289762343|ref|ZP_06521721.1| conserved hypothetical protein [... 211 3e-53 gi|15827413|ref|NP_301676.1| hypothetical protein ML0891 [Mycoba... 163 6e-39 gi|240168241|ref|ZP_04746900.1| hypothetical protein MkanA1_0294... 145 3e-33 gi|183983217|ref|YP_001851508.1| hypothetical protein MMAR_3227 ... 144 3e-33 gi|118618826|ref|YP_907158.1| hypothetical protein MUL_3538 [Myc... 142 2e-32 gi|342859893|ref|ZP_08716546.1| hypothetical protein MCOL_13478 ... 140 5e-32 gi|254819752|ref|ZP_05224753.1| hypothetical protein MintA_07504... 135 3e-30 gi|120404517|ref|YP_954346.1| hypothetical protein Mvan_3545 [My... 134 4e-30 gi|296166047|ref|ZP_06848496.1| conserved hypothetical protein [... 131 4e-29 gi|118466123|ref|YP_881515.1| hypothetical protein MAV_2311 [Myc... 130 5e-29 gi|41408019|ref|NP_960855.1| hypothetical protein MAP1921c [Myco... 129 1e-28 gi|254774983|ref|ZP_05216499.1| hypothetical protein MaviaA2_099... 129 1e-28 gi|145223553|ref|YP_001134231.1| hypothetical protein Mflv_2966 ... 114 5e-24 gi|118470291|ref|YP_888526.1| hypothetical protein MSMEG_4249 [M... 108 3e-22 gi|333990360|ref|YP_004522974.1| hypothetical protein JDM601_172... 106 1e-21 gi|126435867|ref|YP_001071558.1| hypothetical protein Mjls_3289 ... 103 7e-21 gi|108800244|ref|YP_640441.1| hypothetical protein Mmcs_3278 [My... 103 1e-20 gi|169629070|ref|YP_001702719.1| hypothetical protein MAB_1983 [... 97.4 6e-19 gi|325676945|ref|ZP_08156617.1| hypothetical protein HMPREF0724_... 72.8 1e-11 gi|111018130|ref|YP_701102.1| hypothetical protein RHA1_ro01117 ... 72.0 3e-11 gi|312140173|ref|YP_004007509.1| hypothetical protein REQ_28100 ... 71.6 3e-11 gi|54023682|ref|YP_117924.1| hypothetical protein nfa17140 [Noca... 65.9 2e-09 gi|226307069|ref|YP_002767029.1| hypothetical protein RER_35820 ... 64.3 6e-09 gi|333918967|ref|YP_004492548.1| hypothetical protein AS9A_1296 ... 62.0 3e-08 gi|229490460|ref|ZP_04384301.1| conserved hypothetical protein [... 61.2 5e-08 gi|226360259|ref|YP_002778037.1| hypothetical protein ROP_08450 ... 60.1 1e-07 gi|302525582|ref|ZP_07277924.1| predicted protein [Streptomyces ... 41.6 0.040 gi|300784357|ref|YP_003764648.1| hypothetical protein AMED_2450 ... 40.8 0.070 gi|256375526|ref|YP_003099186.1| hypothetical protein Amir_1388 ... 37.0 0.92 gi|331696585|ref|YP_004332824.1| hypothetical protein Psed_2771 ... 36.2 1.6 gi|87239694|emb|CAJ31946.1| alpha-2B adrenergic receptor [Ornith... 35.0 3.9 gi|291004299|ref|ZP_06562272.1| hypothetical protein SeryN2_0724... 34.3 6.7 gi|134098281|ref|YP_001103942.1| hypothetical protein SACE_1699 ... 34.3 7.0 gi|171687435|ref|XP_001908658.1| hypothetical protein [Podospora... 33.9 7.8 gi|257056476|ref|YP_003134308.1| hypothetical protein Svir_24870... 33.5 10.0 >gi|15841673|ref|NP_336710.1| hypothetical protein MT2238 [Mycobacterium tuberculosis CDC1551] gi|254232337|ref|ZP_04925664.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254364982|ref|ZP_04981028.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] 27 more sequence titles Length=134 Score = 263 bits (671), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG Sbjct 4 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 63 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS Sbjct 64 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 123 Query 121 HYQAIPVTIEE 131 HYQAIPVTIEE Sbjct 124 HYQAIPVTIEE 134 >gi|15609320|ref|NP_216699.1| hypothetical protein Rv2183c [Mycobacterium tuberculosis H37Rv] gi|31793361|ref|NP_855854.1| hypothetical protein Mb2205c [Mycobacterium bovis AF2122/97] gi|121638063|ref|YP_978287.1| hypothetical protein BCG_2198c [Mycobacterium bovis BCG str. Pasteur 1173P2] 48 more sequence titles Length=131 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 130/131 (99%), Positives = 131/131 (100%), Gaps = 0/131 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG Sbjct 1 MSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS Sbjct 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 Query 121 HYQAIPVTIEE 131 HYQAIPVTIEE Sbjct 121 HYQAIPVTIEE 131 >gi|289762343|ref|ZP_06521721.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709849|gb|EFD73865.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=105 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 104/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%) Query 27 VRVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIADHSLALLEVIRAIVDD 86 +RVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIADHSLALLEVIRAIVDD Sbjct 1 MRVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIADHSLALLEVIRAIVDD 60 Query 87 IDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKSHYQAIPVTIEE 131 IDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKSHYQAIPVTIEE Sbjct 61 IDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKSHYQAIPVTIEE 105 >gi|15827413|ref|NP_301676.1| hypothetical protein ML0891 [Mycobacterium leprae TN] gi|221229890|ref|YP_002503306.1| hypothetical protein MLBr_00891 [Mycobacterium leprae Br4923] gi|3080494|emb|CAA18691.1| hypothetical protein MLCB268.25c [Mycobacterium leprae] gi|13092963|emb|CAC31272.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932997|emb|CAR70986.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=130 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 81/131 (62%), Positives = 99/131 (76%), Gaps = 1/131 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SG + D+ PELRKLAQ LDGI PAVR AAA+ +G GTGKCQQ WCP+CAL ALV G Sbjct 1 MSGGYADIGPELRKLAQMTLDGIGPAVRSAAALVAGAR-GTGKCQQAWCPVCALTALVIG 59 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 EQHPLLTVIADHS+ALL+VIRAIVDDID+S K PP+ P GGG + + G+++ Sbjct 60 EQHPLLTVIADHSVALLDVIRAIVDDIDQSNKIPPDSPHGGGLDTETPAQTNTSNGTVRR 119 Query 121 HYQAIPVTIEE 131 YQ IPV++E+ Sbjct 120 RYQPIPVSVED 130 >gi|240168241|ref|ZP_04746900.1| hypothetical protein MkanA1_02942 [Mycobacterium kansasii ATCC 12478] Length=136 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/133 (70%), Positives = 107/133 (81%), Gaps = 2/133 (1%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASG--GGPGTGKCQQVWCPLCALAALV 58 V+G H +V PELRKLAQAILD IDPA+R AAAMASG GG KCQQVWCP+CALAA+V Sbjct 4 VTGVHAEVGPELRKLAQAILDAIDPAMRAAAAMASGSTGGKAAAKCQQVWCPVCALAAVV 63 Query 59 TGEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSM 118 GEQHPLLTVIA+HS+ALL VIRAIVDDIDRSAKPPPE PPGGG T + EN + + Sbjct 64 GGEQHPLLTVIANHSVALLNVIRAIVDDIDRSAKPPPEDPPGGGLTSETPPENGSADPGA 123 Query 119 KSHYQAIPVTIEE 131 K+ YQ IPV+++E Sbjct 124 KTRYQPIPVSLQE 136 >gi|183983217|ref|YP_001851508.1| hypothetical protein MMAR_3227 [Mycobacterium marinum M] gi|183176543|gb|ACC41653.1| conserved hypothetical protein [Mycobacterium marinum M] Length=129 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 95/131 (73%), Positives = 109/131 (84%), Gaps = 2/131 (1%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 ++G HT+V PELRKLAQAILDG+DPA+R AAAMASGG GKCQQVWCPLCALAALV G Sbjct 1 MTGPHTEVGPELRKLAQAILDGVDPALRAAAAMASGGA--AGKCQQVWCPLCALAALVNG 58 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 EQHPL TVIA+HS+ALL VIRAIVDDIDRSAKPPP+GPPGGG + S EN + K+ Sbjct 59 EQHPLTTVIAEHSVALLNVIRAIVDDIDRSAKPPPDGPPGGGLSSESAPENGSANADAKT 118 Query 121 HYQAIPVTIEE 131 YQAIP+T++E Sbjct 119 RYQAIPITLQE 129 >gi|118618826|ref|YP_907158.1| hypothetical protein MUL_3538 [Mycobacterium ulcerans Agy99] gi|118570936|gb|ABL05687.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=129 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/131 (72%), Positives = 108/131 (83%), Gaps = 2/131 (1%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 ++G HT+V PELRKLAQAI DG+DPA+R AAAMASGG TGKCQQVWCPLCALAALV G Sbjct 1 MTGPHTEVGPELRKLAQAIRDGVDPALRAAAAMASGGA--TGKCQQVWCPLCALAALVNG 58 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 EQHPL TVIA+HS+ALL VIRAIVDDIDRSAKPP +GPPGGG + S EN + K+ Sbjct 59 EQHPLTTVIAEHSVALLNVIRAIVDDIDRSAKPPSDGPPGGGLSSESAPENGSANADAKT 118 Query 121 HYQAIPVTIEE 131 YQAIP+T++E Sbjct 119 RYQAIPITLQE 129 >gi|342859893|ref|ZP_08716546.1| hypothetical protein MCOL_13478 [Mycobacterium colombiense CECT 3035] gi|342133025|gb|EGT86245.1| hypothetical protein MCOL_13478 [Mycobacterium colombiense CECT 3035] Length=130 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/131 (68%), Positives = 105/131 (81%), Gaps = 1/131 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAH+D+ PELR+LAQ ILDGIDPAVR AAA+ +G G GTGKCQQVWCP+CALAAL TG Sbjct 1 MSGAHSDIGPELRRLAQTILDGIDPAVRAAAALTAGAGVGTGKCQQVWCPVCALAALATG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 +QHPLLT IADHS+ALLEV+R IV+DIDRSAKPPPE P G G +T + + ++ Sbjct 61 DQHPLLTAIADHSIALLEVVRDIVNDIDRSAKPPPEPPNGPPGGGPGAPGDTT-DAAPRT 119 Query 121 HYQAIPVTIEE 131 YQ IPVT+EE Sbjct 120 RYQPIPVTLEE 130 >gi|254819752|ref|ZP_05224753.1| hypothetical protein MintA_07504 [Mycobacterium intracellulare ATCC 13950] Length=127 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 86/131 (66%), Positives = 107/131 (82%), Gaps = 4/131 (3%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAH ++ PELR+LAQ ILDGIDPAVR AAA+ +G GPGTGKCQQVWCP+CALAAL TG Sbjct 1 MSGAHPEIGPELRRLAQTILDGIDPAVRAAAALTAGAGPGTGKCQQVWCPVCALAALATG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 +QHPLLT IADHS+ALL+VIR IVDDIDR+++P PE PP G GA+ +G+ + ++ Sbjct 61 DQHPLLTAIADHSIALLQVIRDIVDDIDRASRPTPEPPPDGPPGGAAD----SGDAAPRT 116 Query 121 HYQAIPVTIEE 131 YQ IPVT++E Sbjct 117 RYQPIPVTLDE 127 >gi|120404517|ref|YP_954346.1| hypothetical protein Mvan_3545 [Mycobacterium vanbaalenii PYR-1] gi|119957335|gb|ABM14340.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=139 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 61/92 (67%), Positives = 81/92 (89%), Gaps = 0/92 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAH+D+ PELR LAQ+ILD +DPAVR+AAA A GG G G+CQQVWCP+CALAAL++G Sbjct 1 MSGAHSDLGPELRVLAQSILDKLDPAVRLAAARAQAGGSGPGRCQQVWCPVCALAALISG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAK 92 EQHPLL+V+A+HS+ALL +++A+VDD++ SA Sbjct 61 EQHPLLSVVAEHSVALLTLLKAMVDDVETSAN 92 >gi|296166047|ref|ZP_06848496.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898612|gb|EFG78169.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=130 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/131 (62%), Positives = 102/131 (78%), Gaps = 1/131 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +S H ++ PELR+LAQ ILDGIDPAVR AAA+ +G GPGTGKCQQVWCP+CALAA+ TG Sbjct 1 MSAGHPEIGPELRRLAQTILDGIDPAVRAAAALTAGRGPGTGKCQQVWCPVCALAAVATG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 +QHPL+TVIADHS+ALLEV+RA++DDI+ + KPPP GP GG E + + ++ Sbjct 61 DQHPLVTVIADHSVALLEVLRAMLDDINGAPKPPPGGPAGGPPADGV-TETPAPDAATRT 119 Query 121 HYQAIPVTIEE 131 YQ IPVT+EE Sbjct 120 RYQPIPVTVEE 130 >gi|118466123|ref|YP_881515.1| hypothetical protein MAV_2311 [Mycobacterium avium 104] gi|118167410|gb|ABK68307.1| conserved hypothetical protein [Mycobacterium avium 104] Length=129 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/131 (67%), Positives = 102/131 (78%), Gaps = 2/131 (1%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAH D+ PELR+LAQ+ILDGIDPAVR AAA+ +G GPGTGKCQQVWCP+CALAAL TG Sbjct 1 MSGAHPDIGPELRRLAQSILDGIDPAVRAAAALTAGAGPGTGKCQQVWCPVCALAALATG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 +QHPLLT IADHS+ALLEVIR IV DIDR++ P P PP G GA +T + ++ Sbjct 61 DQHPLLTAIADHSIALLEVIRDIVADIDRASGPTPGPPPDGPPGGAPDTPDTG--QAPRT 118 Query 121 HYQAIPVTIEE 131 YQ IPVT EE Sbjct 119 RYQPIPVTFEE 129 >gi|41408019|ref|NP_960855.1| hypothetical protein MAP1921c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396374|gb|AAS04238.1| hypothetical protein MAP_1921c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461905|gb|EGO40758.1| hypothetical protein MAPs_25760 [Mycobacterium avium subsp. paratuberculosis S397] Length=129 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/131 (67%), Positives = 103/131 (79%), Gaps = 2/131 (1%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAH D+ PELR+LAQ+ILDGIDPAVR AAA+ +G GPGTGKCQQVWCP+CALAAL TG Sbjct 1 MSGAHPDIGPELRRLAQSILDGIDPAVRAAAALTAGAGPGTGKCQQVWCPVCALAALATG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 +QHPLLT IADHS+ALL+VIR IV DIDR++ P PE PP G GA +T + ++ Sbjct 61 DQHPLLTAIADHSIALLDVIRDIVADIDRASGPTPEPPPDGPPGGAPDTPDTG--QAPRT 118 Query 121 HYQAIPVTIEE 131 YQ IPVT EE Sbjct 119 RYQPIPVTFEE 129 >gi|254774983|ref|ZP_05216499.1| hypothetical protein MaviaA2_09964 [Mycobacterium avium subsp. avium ATCC 25291] Length=129 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/131 (66%), Positives = 102/131 (78%), Gaps = 2/131 (1%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 +SGAH D+ PELR+LA++ILDGIDPAVR AAA+ +G GPGTGKCQQVWCP+CALAAL TG Sbjct 1 MSGAHPDIGPELRRLAESILDGIDPAVRAAAALTAGAGPGTGKCQQVWCPVCALAALATG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 +QHPLLT IADHS+ALLEVIR IV DIDR++ P P PP G GA +T + ++ Sbjct 61 DQHPLLTAIADHSIALLEVIRDIVADIDRASGPTPGPPPDGPPGGAPDTPDTG--QAPRT 118 Query 121 HYQAIPVTIEE 131 YQ IPVT EE Sbjct 119 RYQPIPVTFEE 129 >gi|145223553|ref|YP_001134231.1| hypothetical protein Mflv_2966 [Mycobacterium gilvum PYR-GCK] gi|315443900|ref|YP_004076779.1| hypothetical protein Mspyr1_22990 [Mycobacterium sp. Spyr1] gi|145216039|gb|ABP45443.1| hypothetical protein Mflv_2966 [Mycobacterium gilvum PYR-GCK] gi|315262203|gb|ADT98944.1| hypothetical protein Mspyr1_22990 [Mycobacterium sp. Spyr1] Length=134 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/138 (48%), Positives = 89/138 (65%), Gaps = 11/138 (7%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 ++GAH ++ PELR LAQ+ILD +DP +R+AAA A G+CQQVWCP+CALAAL++G Sbjct 1 MNGAHPELGPELRALAQSILDRLDPVIRLAAARAQASAGVPGQCQQVWCPVCALAALISG 60 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 EQHPLLTV+ADHS+ALL V++A++DD+D + G + +G GS Sbjct 61 EQHPLLTVVADHSVALLTVLKAMLDDMDDAGT----ATVGAPEPPTPDTPPPDGAGSPDP 116 Query 121 -------HYQAIPVTIEE 131 YQ IPV I+E Sbjct 117 APPDPPGRYQHIPVDIDE 134 >gi|118470291|ref|YP_888526.1| hypothetical protein MSMEG_4249 [Mycobacterium smegmatis str. MC2 155] gi|118171578|gb|ABK72474.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=135 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/135 (55%), Positives = 92/135 (69%), Gaps = 4/135 (2%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGP-GTGKCQQVWCPLCALAALVT 59 ++GAH D+ PELR+LAQAILD +DPAVR+AAA A+ G G+CQQVWCP+CALAA+V Sbjct 1 MTGAHPDLGPELRQLAQAILDRLDPAVRMAAARAAAAAAQGPGRCQQVWCPVCALAAVVN 60 Query 60 GEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGEN---TNGEG 116 GE+HPLL VI +HS+ALL VIRA++DD GP G G + T+G G Sbjct 61 GEEHPLLGVITEHSVALLAVIRALLDDTGPGGDTDGPGPGPGDDGPGPGPDETPPTSGPG 120 Query 117 SMKSHYQAIPVTIEE 131 + YQ IPVT+EE Sbjct 121 AGPGRYQPIPVTVEE 135 >gi|333990360|ref|YP_004522974.1| hypothetical protein JDM601_1720 [Mycobacterium sp. JDM601] gi|333486328|gb|AEF35720.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=122 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/132 (53%), Positives = 85/132 (65%), Gaps = 16/132 (12%) Query 2 SGAHTDVR---PELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALV 58 +GAH D+ PELRKLAQAILD +DPAVR AA +A+ PG KCQQVWCP+CALAALV Sbjct 3 AGAHRDLGELGPELRKLAQAILDRLDPAVRAAAMLAAADAPG--KCQQVWCPVCALAALV 60 Query 59 TGEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSM 118 TGE+HPLL+++A+HS+AL EVIRA+V + G S Sbjct 61 TGEEHPLLSIVAEHSVALFEVIRAVVGETGDRPG-----------PPDGPPPGGAGGASA 109 Query 119 KSHYQAIPVTIE 130 K+ Y+ IPVTIE Sbjct 110 KTGYEHIPVTIE 121 >gi|126435867|ref|YP_001071558.1| hypothetical protein Mjls_3289 [Mycobacterium sp. JLS] gi|126235667|gb|ABN99067.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=130 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/132 (56%), Positives = 87/132 (66%), Gaps = 3/132 (2%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPG-TGKCQQVWCPLCALAALVT 59 +S H D+ PELR LAQAIL+ +DPA+R AAA A+G G G CQQVWCP+CALAALV Sbjct 1 MSADHPDLGPELRALAQAILNRVDPAIRFAAARAAGSGADRAGSCQQVWCPVCALAALVQ 60 Query 60 GEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMK 119 GEQHPLL V+A+HS+ALL V+RA+VDDID A PP PP Q Sbjct 61 GEQHPLLNVVAEHSVALLGVVRALVDDID--AAEPPPQPPQPPQPSPPPPSGEPPPRPGP 118 Query 120 SHYQAIPVTIEE 131 YQ IPVT++E Sbjct 119 GRYQHIPVTVQE 130 >gi|108800244|ref|YP_640441.1| hypothetical protein Mmcs_3278 [Mycobacterium sp. MCS] gi|119869372|ref|YP_939324.1| hypothetical protein Mkms_3340 [Mycobacterium sp. KMS] gi|108770663|gb|ABG09385.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695461|gb|ABL92534.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=130 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/132 (56%), Positives = 87/132 (66%), Gaps = 3/132 (2%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGT-GKCQQVWCPLCALAALVT 59 +S H D+ PELR LAQAIL+ +DPA+R AAA A+G G G CQQVWCP+CALAALV Sbjct 1 MSADHPDLGPELRALAQAILNRVDPAIRFAAARAAGSGADRPGSCQQVWCPVCALAALVQ 60 Query 60 GEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMK 119 GEQHPLL V+A+HS+ALL V+RA+VDDID A PP PP Q Sbjct 61 GEQHPLLNVVAEHSVALLGVVRALVDDID--AAGPPPQPPQPPQPSPPPPSGEPPPRPGP 118 Query 120 SHYQAIPVTIEE 131 YQ IPVT++E Sbjct 119 GRYQHIPVTVQE 130 >gi|169629070|ref|YP_001702719.1| hypothetical protein MAB_1983 [Mycobacterium abscessus ATCC 19977] gi|169241037|emb|CAM62065.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=130 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/131 (48%), Positives = 81/131 (62%), Gaps = 1/131 (0%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTG 60 ++G H ++ PELR LA +ILD +DPA+R AA A+ GG GKC Q++CP+CALAALV G Sbjct 1 MTGTHPELGPELRALATSILDKLDPALRQAARAAADGG-TPGKCNQLFCPVCALAALVEG 59 Query 61 EQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTNGEGSMKS 120 E HPLL IA+HSLAL+ V+RA+++ P+ P GGG S + Sbjct 60 EHHPLLATIAEHSLALVMVVRAMLEAEGAGDPSGPDDPDGGGTDPEYRSPFPPPPSSQST 119 Query 121 HYQAIPVTIEE 131 YQ IPV I E Sbjct 120 GYQPIPVDIGE 130 >gi|325676945|ref|ZP_08156617.1| hypothetical protein HMPREF0724_14400 [Rhodococcus equi ATCC 33707] gi|325552245|gb|EGD21935.1| hypothetical protein HMPREF0724_14400 [Rhodococcus equi ATCC 33707] Length=128 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/95 (45%), Positives = 58/95 (62%), Gaps = 12/95 (12%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMA----------SGGGPGTGKCQQVWCP 50 V+G H ++ ELR LA+ +L+ I+P ++ AA A S G G C WCP Sbjct 4 VTGEHAEMVAELRALAETVLERIEPILQKAARGAEAAAESDGPESAGQTGCSSCS--WCP 61 Query 51 LCALAALVTGEQHPLLTVIADHSLALLEVIRAIVD 85 LCALAAL+ GEQH L+T +A H+ ALL V+R ++D Sbjct 62 LCALAALIRGEQHDLVTAVAGHASALLAVLREVLD 96 >gi|111018130|ref|YP_701102.1| hypothetical protein RHA1_ro01117 [Rhodococcus jostii RHA1] gi|110817660|gb|ABG92944.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=133 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/138 (39%), Positives = 74/138 (54%), Gaps = 22/138 (15%) Query 5 HTDVRPELRKLAQAILDGIDPAVR-----VAAAMASGGGPGTGKCQQ-VWCPLCALAALV 58 H + ELR LA+ LD ++P ++ A A A PGTG+ WCP+CALAAL+ Sbjct 5 HAQLVAELRALAETALDRLEPLLQRAAAPHAQAGAEDAIPGTGQWSGCTWCPVCALAALI 64 Query 59 TGEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGP------PGGGQTGASGGENT 112 GEQH L+TV+A + L+ V+R ++D+ P P GP PGGG + A GG Sbjct 65 RGEQHDLVTVLAGQASVLIAVLRQVLDEHAVHDTPGPGGPDAPEPGPGGGTSEADGG--- 121 Query 113 NGEGSMKSHYQAIPVTIE 130 S ++ I VTI+ Sbjct 122 -------SAFEPITVTIK 132 >gi|312140173|ref|YP_004007509.1| hypothetical protein REQ_28100 [Rhodococcus equi 103S] gi|311889512|emb|CBH48829.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=125 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/95 (44%), Positives = 58/95 (62%), Gaps = 12/95 (12%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVRVAAAMA----------SGGGPGTGKCQQVWCP 50 ++G H ++ ELR LA+ +L+ I+P ++ AA A S G G C WCP Sbjct 1 MTGEHAEMVAELRALAETVLERIEPILQKAARGAEAAAESDGPESAGQTGCSSCS--WCP 58 Query 51 LCALAALVTGEQHPLLTVIADHSLALLEVIRAIVD 85 LCALAAL+ GEQH L+T +A H+ ALL V+R ++D Sbjct 59 LCALAALIRGEQHDLVTAVAGHASALLAVLREVLD 93 >gi|54023682|ref|YP_117924.1| hypothetical protein nfa17140 [Nocardia farcinica IFM 10152] gi|54015190|dbj|BAD56560.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=144 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/126 (37%), Positives = 63/126 (50%), Gaps = 15/126 (11%) Query 11 ELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIA 70 ELR LA+ +L+ ++P +R +AA G P C WCP+CA AALV GE H +L IA Sbjct 25 ELRLLAETVLERVEPVLRRSAAE---GQPEWSSCS--WCPVCAAAALVRGEHHDVLAAIA 79 Query 71 DHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGA-------SGGENTNGEGSMKSHYQ 123 DH A++ V+R + P E P +TGA +G G + Y Sbjct 80 DHGTAIVTVLREALAGAPVEPVLPTETDP---ETGARHEHAPRTGESARRGAAGTRPGYV 136 Query 124 AIPVTI 129 IPVT+ Sbjct 137 DIPVTV 142 >gi|226307069|ref|YP_002767029.1| hypothetical protein RER_35820 [Rhodococcus erythropolis PR4] gi|226186186|dbj|BAH34290.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=131 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/138 (34%), Positives = 66/138 (48%), Gaps = 14/138 (10%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVR--VAAAMASGGGPGTGKCQQV-----WCPLCA 53 +S H + E R LA +L ++P ++ AA G + Q V WCP+CA Sbjct 1 MSEEHERLVAEFRALADTVLTRLEPVLQKAAAATADVAGDSASADTQPVFTGCSWCPVCA 60 Query 54 LAALVTGEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGENTN 113 LAALV GE H LL +A H+ A L ++R I+D+ P GP G T G E T Sbjct 61 LAALVRGEHHELLAFLAGHAAAFLALLREILDEFLGGPSGPDRGPDSGATT--PGAERTR 118 Query 114 GEGSMKSHYQAIPVTIEE 131 + + I VT+++ Sbjct 119 -----TAAFVPINVTVKD 131 >gi|333918967|ref|YP_004492548.1| hypothetical protein AS9A_1296 [Amycolicicoccus subflavus DQS3-9A1] gi|333481188|gb|AEF39748.1| hypothetical protein AS9A_1296 [Amycolicicoccus subflavus DQS3-9A1] Length=186 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 44/78 (57%), Gaps = 2/78 (2%) Query 11 ELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIA 70 EL+ LA++++D ++P V A G C WCP+CAL AL GE H LL +A Sbjct 29 ELKLLARSVVDRLEPMVAQVAQTQQAGPYLRSGC--AWCPVCALMALSRGENHELLGYVA 86 Query 71 DHSLALLEVIRAIVDDID 88 H +LL +RA++D D Sbjct 87 SHGASLLSFVRALLDSAD 104 >gi|229490460|ref|ZP_04384301.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229322750|gb|EEN88530.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=134 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/141 (31%), Positives = 68/141 (49%), Gaps = 20/141 (14%) Query 1 VSGAHTDVRPELRKLAQAILDGIDPAVR---------VAAAMASGGGPGTGKCQQVWCPL 51 +S H + E R LA+ +L ++P ++ + + ++ P C WCP+ Sbjct 4 MSEEHERLVAEFRALAETVLTRLEPVLQKAAAATADVASDSASTDTQPVFTGCS--WCPV 61 Query 52 CALAALVTGEQHPLLTVIADHSLALLEVIRAIVDDIDRSAKPPPEGPPGGGQTGASGGEN 111 CALAALV GE H LL +A + A L ++R I+D+ G P G G GG Sbjct 62 CALAALVRGEHHELLAFLAGQAAAFLALLREILDEF--------LGGPSGPDRGPDGGPT 113 Query 112 TNG-EGSMKSHYQAIPVTIEE 131 T G E + + + I VT+++ Sbjct 114 TPGAERTRTAAFVPIDVTVKD 134 >gi|226360259|ref|YP_002778037.1| hypothetical protein ROP_08450 [Rhodococcus opacus B4] gi|226238744|dbj|BAH49092.1| hypothetical protein [Rhodococcus opacus B4] Length=132 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/91 (40%), Positives = 54/91 (60%), Gaps = 12/91 (13%) Query 5 HTDVRPELRKLAQAILDGIDPAVR---------VAAAMASGGGPGTGKCQQVWCPLCALA 55 H + ELR LA+ LD ++P ++ A A G GP +G C WCP+CALA Sbjct 5 HAQLLAELRALAETALDRLEPILQRAAAPHAAADAQGAAEGTGPWSG-C--AWCPVCALA 61 Query 56 ALVTGEQHPLLTVIADHSLALLEVIRAIVDD 86 AL+ GEQH L+T++A + L+ V+R ++D+ Sbjct 62 ALIRGEQHDLVTLLAGQASVLIAVLRQVLDE 92 >gi|302525582|ref|ZP_07277924.1| predicted protein [Streptomyces sp. AA4] gi|302434477|gb|EFL06293.1| predicted protein [Streptomyces sp. AA4] Length=176 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 28/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%) Query 1 VSGAHTD-----VRPELRKLAQAILDGIDPAVR--VAAAMASGGGPGTGKCQQV-----W 48 VS H+D + E+R L + +L+ P + +AA S PG + W Sbjct 25 VSEEHSDADGLKLAEEIRLLVEMVLERAAPWLEGVLAAGHGSPEEPGASDVEDSTSGCGW 84 Query 49 CPLCALAALVTGEQHPLLTVIADHSLALLEVIRAIVDD 86 CPLCA+ A+V GE+ + + + + L+ ++RA++ D Sbjct 85 CPLCAIVAVVRGERPEFVARVLEQAAQLVALLRAVLAD 122 >gi|300784357|ref|YP_003764648.1| hypothetical protein AMED_2450 [Amycolatopsis mediterranei U32] gi|299793871|gb|ADJ44246.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340525777|gb|AEK40982.1| hypothetical protein RAM_12460 [Amycolatopsis mediterranei S699] Length=196 Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust. Identities = 16/39 (42%), Positives = 27/39 (70%), Gaps = 0/39 (0%) Query 48 WCPLCALAALVTGEQHPLLTVIADHSLALLEVIRAIVDD 86 WCPLCA+ A+V GE+ L+ +A+ L+ ++RA++ D Sbjct 116 WCPLCAIVAVVRGERPELVARLAEQLAQLVALLRAVLAD 154 >gi|256375526|ref|YP_003099186.1| hypothetical protein Amir_1388 [Actinosynnema mirum DSM 43827] gi|255919829|gb|ACU35340.1| hypothetical protein Amir_1388 [Actinosynnema mirum DSM 43827] Length=136 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 24/71 (34%), Positives = 33/71 (47%), Gaps = 4/71 (5%) Query 11 ELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIA 70 ELR L A + +P + AA G P WCPLC AL G++ L + A Sbjct 12 ELRLLLDAAAERAEPWLHRVAAAEDGHDPAACG----WCPLCNAVALARGDRSQLASKAA 67 Query 71 DHSLALLEVIR 81 +H L+ V+R Sbjct 68 EHVAGLIAVLR 78 >gi|331696585|ref|YP_004332824.1| hypothetical protein Psed_2771 [Pseudonocardia dioxanivorans CB1190] gi|326951274|gb|AEA24971.1| hypothetical protein Psed_2771 [Pseudonocardia dioxanivorans CB1190] Length=139 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/79 (32%), Positives = 40/79 (51%), Gaps = 0/79 (0%) Query 3 GAHTDVRPELRKLAQAILDGIDPAVRVAAAMASGGGPGTGKCQQVWCPLCALAALVTGEQ 62 G H + ELR L +LD + PA+ A A+ P + CP+CA+ A++ GE+ Sbjct 28 GGHAGMAGELRTLVLGVLDRVQPALDRLLADAAAAEPRSAPTTCATCPVCAVLAVLRGER 87 Query 63 HPLLTVIADHSLALLEVIR 81 L +A+ L+ V+R Sbjct 88 PELAARLAEQVGGLVAVLR 106 >gi|87239694|emb|CAJ31946.1| alpha-2B adrenergic receptor [Ornithorhynchus anatinus] Length=414 Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 14/29 (49%), Positives = 19/29 (66%), Gaps = 0/29 (0%) Query 89 RSAKPPPEGPPGGGQTGASGGENTNGEGS 117 R+ +PP +GPP G GA+G + T G GS Sbjct 195 RAGRPPADGPPAHGPPGAAGSDGTPGTGS 223 >gi|291004299|ref|ZP_06562272.1| hypothetical protein SeryN2_07247 [Saccharopolyspora erythraea NRRL 2338] Length=136 Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust. Identities = 25/75 (34%), Positives = 38/75 (51%), Gaps = 7/75 (9%) Query 9 RPELRKLAQAILDGIDPAVRVAAAM---ASGGGPGTGKCQQVWCPLCALAALVTGEQHPL 65 R ++ + + +LDG+ AVR + G P G C WCP+CA+ A+ GE+ L Sbjct 10 RDQVAEELRLLLDGL--AVRAEDYLRGVGESGVPCEGGCG--WCPVCAVVAIARGERPEL 65 Query 66 LTVIADHSLALLEVI 80 +AD AL E + Sbjct 66 TAKLADLVHALREAL 80 >gi|134098281|ref|YP_001103942.1| hypothetical protein SACE_1699 [Saccharopolyspora erythraea NRRL 2338] gi|133910904|emb|CAM01017.1| hypothetical protein SACE_1699 [Saccharopolyspora erythraea NRRL 2338] Length=133 Score = 34.3 bits (77), Expect = 7.0, Method: Compositional matrix adjust. Identities = 25/75 (34%), Positives = 38/75 (51%), Gaps = 7/75 (9%) Query 9 RPELRKLAQAILDGIDPAVRVAAAM---ASGGGPGTGKCQQVWCPLCALAALVTGEQHPL 65 R ++ + + +LDG+ AVR + G P G C WCP+CA+ A+ GE+ L Sbjct 7 RDQVAEELRLLLDGL--AVRAEDYLRGVGESGVPCEGGCG--WCPVCAVVAIARGERPEL 62 Query 66 LTVIADHSLALLEVI 80 +AD AL E + Sbjct 63 TAKLADLVHALREAL 77 >gi|171687435|ref|XP_001908658.1| hypothetical protein [Podospora anserina S mat+] gi|170943679|emb|CAP69331.1| unnamed protein product [Podospora anserina S mat+] Length=1308 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 16/28 (58%), Positives = 18/28 (65%), Gaps = 1/28 (3%) Query 90 SAKPPPEGPPGGGQTGASGGENTNGEGS 117 S K PEG PG G G +GGE TNG G+ Sbjct 234 SGKTVPEGEPGKG-VGVAGGEGTNGNGA 260 >gi|257056476|ref|YP_003134308.1| hypothetical protein Svir_24870 [Saccharomonospora viridis DSM 43017] gi|256586348|gb|ACU97481.1| hypothetical protein Svir_24870 [Saccharomonospora viridis DSM 43017] Length=153 Score = 33.5 bits (75), Expect = 10.0, Method: Compositional matrix adjust. Identities = 15/36 (42%), Positives = 20/36 (56%), Gaps = 0/36 (0%) Query 37 GGPGTGKCQQVWCPLCALAALVTGEQHPLLTVIADH 72 G GTG WCPLCA+ A+ GE+ + I +H Sbjct 55 GAAGTGAEGSQWCPLCAVVAVFRGERVDVAARIVEH 90 Lambda K H 0.314 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131523520100 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40