BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2189c
Length=257
Score E
Sequences producing significant alignments: (Bits) Value
gi|254364988|ref|ZP_04981034.1| hypothetical protein TBHG_02141 ... 496 1e-138
gi|15609326|ref|NP_216705.1| hypothetical protein Rv2189c [Mycob... 494 7e-138
gi|340627194|ref|YP_004745646.1| hypothetical protein MCAN_22111... 491 4e-137
gi|254232343|ref|ZP_04925670.1| conserved hypothetical protein [... 474 4e-132
gi|289443695|ref|ZP_06433439.1| conserved hypothetical protein [... 441 7e-122
gi|289570304|ref|ZP_06450531.1| conserved hypothetical protein [... 439 2e-121
gi|289758310|ref|ZP_06517688.1| conserved hypothetical protein [... 413 2e-113
gi|289574874|ref|ZP_06455101.1| conserved hypothetical protein [... 352 4e-95
gi|41408025|ref|NP_960861.1| hypothetical protein MAP1927c [Myco... 340 8e-92
gi|118463583|ref|YP_881509.1| hypothetical protein MAV_2305 [Myc... 339 3e-91
gi|342859899|ref|ZP_08716552.1| hypothetical protein MCOL_13508 ... 323 2e-86
gi|240168247|ref|ZP_04746906.1| hypothetical protein MkanA1_0297... 316 2e-84
gi|183983223|ref|YP_001851514.1| hypothetical protein MMAR_3233 ... 306 1e-81
gi|296166054|ref|ZP_06848502.1| conserved hypothetical protein [... 306 2e-81
gi|254819758|ref|ZP_05224759.1| hypothetical protein MintA_07534... 276 2e-72
gi|333990354|ref|YP_004522968.1| hypothetical protein JDM601_171... 243 2e-62
gi|118473864|ref|YP_888532.1| hypothetical protein MSMEG_4255 [M... 234 8e-60
gi|108800252|ref|YP_640449.1| hypothetical protein Mmcs_3286 [My... 213 2e-53
gi|126435875|ref|YP_001071566.1| hypothetical protein Mjls_3297 ... 209 4e-52
gi|336461911|gb|EGO40764.1| hypothetical protein MAPs_25821 [Myc... 194 8e-48
gi|120404523|ref|YP_954352.1| hypothetical protein Mvan_3551 [My... 177 2e-42
gi|145223547|ref|YP_001134225.1| hypothetical protein Mflv_2960 ... 151 7e-35
gi|315443894|ref|YP_004076773.1| hypothetical protein Mspyr1_229... 151 8e-35
gi|226360265|ref|YP_002778043.1| hypothetical protein ROP_08510 ... 131 1e-28
gi|169629062|ref|YP_001702711.1| hypothetical protein MAB_1975 [... 129 3e-28
gi|343924177|ref|ZP_08763740.1| hypothetical protein GOALK_002_0... 127 2e-27
gi|111018136|ref|YP_701108.1| hypothetical protein RHA1_ro01123 ... 127 2e-27
gi|336461912|gb|EGO40765.1| hypothetical protein MAPs_25822 [Myc... 126 3e-27
gi|326382527|ref|ZP_08204218.1| hypothetical protein SCNU_06295 ... 126 3e-27
gi|262202940|ref|YP_003274148.1| hypothetical protein Gbro_3048 ... 122 7e-26
gi|325676939|ref|ZP_08156611.1| hypothetical protein HMPREF0724_... 112 5e-23
gi|312140179|ref|YP_004007515.1| hypothetical protein REQ_28160 ... 112 5e-23
gi|134098275|ref|YP_001103936.1| hypothetical protein SACE_1693 ... 109 4e-22
gi|54023687|ref|YP_117929.1| hypothetical protein nfa17190 [Noca... 102 4e-20
gi|226307075|ref|YP_002767035.1| hypothetical protein RER_35880 ... 102 8e-20
gi|229490342|ref|ZP_04384183.1| conserved hypothetical protein [... 93.2 4e-17
gi|256375519|ref|YP_003099179.1| hypothetical protein Amir_1381 ... 80.9 2e-13
gi|302534014|ref|ZP_07286356.1| conserved hypothetical protein [... 80.1 3e-13
gi|333918961|ref|YP_004492542.1| hypothetical protein AS9A_1290 ... 79.3 5e-13
gi|337765274|emb|CCB73983.1| conserved protein of unknown functi... 78.6 8e-13
gi|344999167|ref|YP_004802021.1| hypothetical protein SACTE_1565... 76.6 3e-12
gi|291440132|ref|ZP_06579522.1| conserved hypothetical protein [... 72.8 4e-11
gi|302550848|ref|ZP_07303190.1| conserved hypothetical protein [... 72.8 4e-11
gi|254382647|ref|ZP_04998005.1| conserved hypothetical protein [... 71.6 1e-10
gi|297199115|ref|ZP_06916512.1| conserved hypothetical protein [... 70.1 3e-10
gi|302518581|ref|ZP_07270923.1| conserved hypothetical protein [... 69.3 5e-10
gi|21220611|ref|NP_626390.1| hypothetical protein SCO2134 [Strep... 68.9 7e-10
gi|289772141|ref|ZP_06531519.1| conserved hypothetical protein [... 68.2 1e-09
gi|318062810|ref|ZP_07981531.1| hypothetical protein SSA3_33068 ... 66.6 4e-09
gi|318081828|ref|ZP_07989137.1| hypothetical protein SSA3_35170 ... 66.6 4e-09
>gi|254364988|ref|ZP_04981034.1| hypothetical protein TBHG_02141 [Mycobacterium tuberculosis str.
Haarlem]
gi|308232061|ref|ZP_07414777.2| hypothetical protein TMAG_00377 [Mycobacterium tuberculosis SUMu001]
gi|308369649|ref|ZP_07418554.2| hypothetical protein TMBG_00735 [Mycobacterium tuberculosis SUMu002]
25 more sequence titles
Length=277
Score = 496 bits (1278), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 257/257 (100%), Positives = 257/257 (100%), Gaps = 0/257 (0%)
Query 1 VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF
Sbjct 21 VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 80
Query 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP
Sbjct 81 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 140
Query 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS
Sbjct 141 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 200
Query 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 240
LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL
Sbjct 201 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 260
Query 241 GIDAAGLLARWQRWLMG 257
GIDAAGLLARWQRWLMG
Sbjct 261 GIDAAGLLARWQRWLMG 277
>gi|15609326|ref|NP_216705.1| hypothetical protein Rv2189c [Mycobacterium tuberculosis H37Rv]
gi|15841679|ref|NP_336716.1| hypothetical protein MT2244 [Mycobacterium tuberculosis CDC1551]
gi|31793368|ref|NP_855861.1| hypothetical protein Mb2212c [Mycobacterium bovis AF2122/97]
36 more sequence titles
Length=257
Score = 494 bits (1271), Expect = 7e-138, Method: Compositional matrix adjust.
Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%)
Query 1 VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
+RDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF
Sbjct 1 MRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
Query 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP
Sbjct 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
Query 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS
Sbjct 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
Query 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 240
LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL
Sbjct 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 240
Query 241 GIDAAGLLARWQRWLMG 257
GIDAAGLLARWQRWLMG
Sbjct 241 GIDAAGLLARWQRWLMG 257
>gi|340627194|ref|YP_004745646.1| hypothetical protein MCAN_22111 [Mycobacterium canettii CIPT
140010059]
gi|340005384|emb|CCC44543.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=257
Score = 491 bits (1265), Expect = 4e-137, Method: Compositional matrix adjust.
Identities = 255/257 (99%), Positives = 256/257 (99%), Gaps = 0/257 (0%)
Query 1 VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
+RDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF
Sbjct 1 MRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
Query 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP
Sbjct 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
Query 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS
Sbjct 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
Query 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 240
LPSDTDLDTP PQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL
Sbjct 181 LPSDTDLDTPEPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 240
Query 241 GIDAAGLLARWQRWLMG 257
GIDAAGLLARWQRWLMG
Sbjct 241 GIDAAGLLARWQRWLMG 257
>gi|254232343|ref|ZP_04925670.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124601402|gb|EAY60412.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=247
Score = 474 bits (1221), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 11 VVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIF 70
+VAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIF
Sbjct 1 MVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIF 60
Query 71 VVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAAL 130
VVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAAL
Sbjct 61 VVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAAL 120
Query 131 RIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTP 190
RIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTP
Sbjct 121 RIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTP 180
Query 191 GPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLAR 250
GPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLAR
Sbjct 181 GPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLAR 240
Query 251 WQRWLMG 257
WQRWLMG
Sbjct 241 WQRWLMG 247
>gi|289443695|ref|ZP_06433439.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416614|gb|EFD13854.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=285
Score = 441 bits (1133), Expect = 7e-122, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 31 LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLAS 90
LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLAS
Sbjct 30 LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLAS 89
Query 91 QWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALD 150
QWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALD
Sbjct 90 QWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALD 149
Query 151 APRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAA 210
APRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAA
Sbjct 150 APRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAA 209
Query 211 AYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 257
AYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG
Sbjct 210 AYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 256
>gi|289570304|ref|ZP_06450531.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750783|ref|ZP_06510161.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754297|ref|ZP_06513675.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289544058|gb|EFD47706.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289691370|gb|EFD58799.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694884|gb|EFD62313.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=256
Score = 439 bits (1129), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 31 LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLAS 90
LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLAS
Sbjct 30 LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLAS 89
Query 91 QWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALD 150
QWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALD
Sbjct 90 QWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALD 149
Query 151 APRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAA 210
APRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAA
Sbjct 150 APRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAA 209
Query 211 AYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 257
AYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG
Sbjct 210 AYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 256
>gi|289758310|ref|ZP_06517688.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289713874|gb|EFD77886.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=258
Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 238/263 (91%), Positives = 240/263 (92%), Gaps = 11/263 (4%)
Query 1 VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
+RDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF
Sbjct 1 MRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
Query 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP
Sbjct 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
Query 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS
Sbjct 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
Query 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDV- 239
LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYL GH T +
Sbjct 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYL-----GHLWCRTLRPGLP 235
Query 240 -----LGIDAAGLLARWQRWLMG 257
GIDAAGLLARW LMG
Sbjct 236 PPTTSSGIDAAGLLARWHGGLMG 258
>gi|289574874|ref|ZP_06455101.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289539305|gb|EFD43883.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=254
Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/179 (100%), Positives = 179/179 (100%), Gaps = 0/179 (0%)
Query 79 QFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHEL 138
QFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHEL
Sbjct 76 QFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHEL 135
Query 139 FHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAY 198
FHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAY
Sbjct 136 FHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAY 195
Query 199 DRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 257
DRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG
Sbjct 196 DRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 254
>gi|41408025|ref|NP_960861.1| hypothetical protein MAP1927c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396380|gb|AAS04244.1| hypothetical protein MAP_1927c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=270
Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 179/258 (70%), Positives = 202/258 (79%), Gaps = 5/258 (1%)
Query 2 RDGPAAPAQVVAPADGFVALR----VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEV 57
RDG PAQ+V+P + V DRTVRLL LGG A+DRLL+R+AAG+ AA+ V
Sbjct 12 RDGRTRPAQLVSPVRSQFSASSRSLVVGDRTVRLLGLGGPASDRLLARVAAGMGAAITAV 71
Query 58 VAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIV 117
AFWG DWS +I VVAAG+DE+F AAAGGG A+QWADIAA+TV DRVDP RR GQRIV
Sbjct 72 EAFWGADWSREISVVAAGTDEEFRAAAGGGPATQWADIAAVTVSDRVDPVRRIASGQRIV 131
Query 118 FAPGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSV 177
FAPGAA+MSPA+LRIVL HELFHYA+RADT DAPRWL EGVADFV RP P PADA+ +
Sbjct 132 FAPGAANMSPASLRIVLAHELFHYASRADTVADAPRWLTEGVADFVGRPPAPVPADAL-L 190
Query 178 ALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAH 237
L+LPSDTDLD PGPQRS AYDRAWWFARFVA +YG KLRELYLATCG+ DLATAA
Sbjct 191 PLTLPSDTDLDVPGPQRSSAYDRAWWFARFVADSYGPPKLRELYLATCGLRRADLATAAQ 250
Query 238 DVLGIDAAGLLARWQRWL 255
+VLG AGLL RW +WL
Sbjct 251 EVLGTSPAGLLTRWHQWL 268
>gi|118463583|ref|YP_881509.1| hypothetical protein MAV_2305 [Mycobacterium avium 104]
gi|254774977|ref|ZP_05216493.1| hypothetical protein MaviaA2_09934 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164870|gb|ABK65767.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=276
Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/258 (69%), Positives = 202/258 (79%), Gaps = 5/258 (1%)
Query 2 RDGPAAPAQVVAPADGFVALR----VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEV 57
RDG PAQ+V+P + V DRTVRLL LGG A+DRLL+R+AAG+ AA+ V
Sbjct 18 RDGRTRPAQLVSPVRSQFSASSRSLVVGDRTVRLLGLGGPASDRLLARVAAGMGAAITAV 77
Query 58 VAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIV 117
AFWG DWS +I VVAAG+DE+F AAAGGG A+QWADIAA+TV DRVDP RR GQRIV
Sbjct 78 EAFWGADWSREISVVAAGTDEEFRAAAGGGPATQWADIAAVTVSDRVDPVRRIASGQRIV 137
Query 118 FAPGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSV 177
FAPGAA+MSPA+LRIV+ HELFHYA+RADT DAPRWL EGVADFV RP P PADA+ +
Sbjct 138 FAPGAANMSPASLRIVVAHELFHYASRADTVADAPRWLTEGVADFVGRPPAPVPADAL-L 196
Query 178 ALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAH 237
L+LPSDTDLD PGPQRS AYDRAWWFARFVA +YG KLRELYLATCG+ DLATAA
Sbjct 197 PLTLPSDTDLDVPGPQRSSAYDRAWWFARFVADSYGPPKLRELYLATCGLRRADLATAAQ 256
Query 238 DVLGIDAAGLLARWQRWL 255
+VLG AGLL RW +WL
Sbjct 257 EVLGTSPAGLLTRWHQWL 274
>gi|342859899|ref|ZP_08716552.1| hypothetical protein MCOL_13508 [Mycobacterium colombiense CECT
3035]
gi|342133031|gb|EGT86251.1| hypothetical protein MCOL_13508 [Mycobacterium colombiense CECT
3035]
Length=269
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/259 (67%), Positives = 194/259 (75%), Gaps = 5/259 (1%)
Query 1 VRDGPAAPAQVVAPADGFVALRVAD----DRTVRLLSLGGAATDRLLSRIAAGIDAAVDE 56
VR+ PAQ+V PA V DRTVRLL LGGAA+DRLLSR+A+ + AA+
Sbjct 10 VRESRIRPAQLVTPARSQVNASTKSITVGDRTVRLLGLGGAASDRLLSRVASTMGAAIAA 69
Query 57 VVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRI 116
V +FWG DW +I VVAAG+DE+F AAAGGG ASQWADIAA+TVVDRVDP RR VGQRI
Sbjct 70 VESFWGVDWPREISVVAAGTDEEFRAAAGGGPASQWADIAAVTVVDRVDPVRRVAVGQRI 129
Query 117 VFAPGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVS 176
VFAPGAA MS A+LRIVL HELFHYAARADT DAPRWL EGVADFV RP P D +
Sbjct 130 VFAPGAAKMSAASLRIVLAHELFHYAARADTVADAPRWLTEGVADFVGRPPARVPTDTL- 188
Query 177 VALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAA 236
+ ++LP+D DLD PG QRSLAYDRAWWFARFVA +G KLR+LYLATCG+ H D+A A
Sbjct 189 LPMALPTDADLDVPGAQRSLAYDRAWWFARFVADTFGPPKLRDLYLATCGIRHADMAAAG 248
Query 237 HDVLGIDAAGLLARWQRWL 255
DVLG AGLL WQ+WL
Sbjct 249 QDVLGASPAGLLTHWQQWL 267
>gi|240168247|ref|ZP_04746906.1| hypothetical protein MkanA1_02972 [Mycobacterium kansasii ATCC
12478]
Length=287
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/255 (69%), Positives = 192/255 (76%), Gaps = 3/255 (1%)
Query 1 VRDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAF 60
VRDG AAP+ G + V RTV L+ LGGA ++RLLS +AA + A+D V F
Sbjct 34 VRDGWAAPSAARVDDAGLTPV-VVGGRTVWLIGLGGADSERLLSHVAANLGPAIDAVADF 92
Query 61 WGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAP 120
WGTDW H+I VVAAGSD+QF AAGGG ASQWADIAA+TV + VD ARRT GQRIVFAP
Sbjct 93 WGTDWPHEISVVAAGSDDQFRTAAGGGPASQWADIAAVTVAEHVDTARRTAAGQRIVFAP 152
Query 121 GAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS 180
GAA MS +ALRIVL HELFHYAAR DTALDAPRWL EGVADFVARP P DA+ L+
Sbjct 153 GAADMSQSALRIVLTHELFHYAARVDTALDAPRWLIEGVADFVARPAFRAPVDALP--LA 210
Query 181 LPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVL 240
LPSD+DLDT GP+RSLAYDRAWWFARFVA YGT LRELYLA CG GH D ATAA VL
Sbjct 211 LPSDSDLDTAGPRRSLAYDRAWWFARFVAQTYGTTALRELYLAACGAGHPDFATAARTVL 270
Query 241 GIDAAGLLARWQRWL 255
D AGLLARWQ WL
Sbjct 271 ATDPAGLLARWQGWL 285
>gi|183983223|ref|YP_001851514.1| hypothetical protein MMAR_3233 [Mycobacterium marinum M]
gi|183176549|gb|ACC41659.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=285
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/233 (72%), Positives = 181/233 (78%), Gaps = 2/233 (0%)
Query 23 VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHA 82
V DRTVRL++LGGA +D LLSR+ A I AV+ VVAFWGTDW+ +I VVAAGSDEQF
Sbjct 51 VIGDRTVRLINLGGANSDLLLSRVGADIRGAVNAVVAFWGTDWAREISVVAAGSDEQFRT 110
Query 83 AAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYA 142
AAGGG ASQWADIAA+TV +R DP R V GQRIVFAPGA MS ALRIVL HELFHYA
Sbjct 111 AAGGGTASQWADIAAVTVAERFDPGSRAVAGQRIVFAPGAVKMSATALRIVLTHELFHYA 170
Query 143 ARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAW 202
AR DTALDAPRWL EGVADFVARP T PA+A AL SD DLD PGP RS AYDRAW
Sbjct 171 ARVDTALDAPRWLTEGVADFVARPTTSRPAEAPPAALP--SDDDLDIPGPARSRAYDRAW 228
Query 203 WFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWL 255
WF RFVA YGT KLR+LYLA CG GH DL AA +VLG DAAGLLA WQ+W+
Sbjct 229 WFTRFVADTYGTTKLRDLYLAACGPGHSDLPRAALEVLGTDAAGLLAGWQQWM 281
>gi|296166054|ref|ZP_06848502.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898593|gb|EFG78151.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=307
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/257 (67%), Positives = 194/257 (76%), Gaps = 4/257 (1%)
Query 3 DGPAAPAQVVAPADG-FVALR---VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVV 58
D A P Q+V PA F A V DRTVRL+ GG A DRLLSR+A+ + A+ V
Sbjct 47 DRRARPPQLVTPARAQFSATSRSLVVGDRTVRLIGHGGPAGDRLLSRVASAVGGAIGAVE 106
Query 59 AFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVF 118
AFWG DWS +I +VAA +DE+F AAAGGG A+QWADIAA+TVVDRVD ARR +G+RIVF
Sbjct 107 AFWGVDWSREIALVAAHTDEEFRAAAGGGPAAQWADIAAVTVVDRVDAARRVAIGERIVF 166
Query 119 APGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVA 178
APGAA+M+ ALRIVL HELFHYAAR DTA DAPRWL EGVADFVARP+ P PADA+ V
Sbjct 167 APGAANMTAGALRIVLIHELFHYAARVDTAPDAPRWLTEGVADFVARPQAPVPADALPVP 226
Query 179 LSLPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHD 238
L+LPSD DLD PG QRSLAYDRAWWFARFVA YG AKLR+LYLA CG GH D+ TA HD
Sbjct 227 LTLPSDADLDAPGSQRSLAYDRAWWFARFVADTYGAAKLRDLYLAVCGPGHTDVPTALHD 286
Query 239 VLGIDAAGLLARWQRWL 255
VL + G+L RW WL
Sbjct 287 VLATEVPGVLVRWHEWL 303
>gi|254819758|ref|ZP_05224759.1| hypothetical protein MintA_07534 [Mycobacterium intracellulare
ATCC 13950]
Length=271
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/252 (64%), Positives = 189/252 (75%), Gaps = 5/252 (1%)
Query 8 PAQVVAPADGFVALR----VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGT 63
P Q++ PA + V DRTVRLL LGG +++RLL R+A+ + AA+ V AFWG
Sbjct 19 PPQLITPARSQASASTKSIVVGDRTVRLLGLGGPSSERLLFRVASDMGAAIGAVEAFWGL 78
Query 64 DWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAA 123
DW +I +VAAG+DE+F AAAGGG A+QWADIAA TV DR+DP RR +GQRIVFAPGAA
Sbjct 79 DWPREISIVAAGTDEEFRAAAGGGPAAQWADIAAATVSDRIDPVRRVALGQRIVFAPGAA 138
Query 124 HMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPS 183
+MS A+LRIVL HELFHYAARADT DAPRWL EGVADFV RP TP P + + + ++LPS
Sbjct 139 NMSAASLRIVLAHELFHYAARADTVADAPRWLTEGVADFVGRPPTPVPKEGL-LPMTLPS 197
Query 184 DTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGID 243
D DLD PG RSLAYDRAWWFARFVA +G KL +LYLATCG+ D+ATAAHDVL
Sbjct 198 DADLDVPGAPRSLAYDRAWWFARFVADTFGAPKLHDLYLATCGLRRADMATAAHDVLDTS 257
Query 244 AAGLLARWQRWL 255
AGLL W++WL
Sbjct 258 EAGLLTAWRQWL 269
>gi|333990354|ref|YP_004522968.1| hypothetical protein JDM601_1714 [Mycobacterium sp. JDM601]
gi|333486322|gb|AEF35714.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=253
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/238 (64%), Positives = 169/238 (72%), Gaps = 4/238 (1%)
Query 21 LRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQF 80
L V D R+V L + GG + LLSR+AA I +AV+ V AFWGTDWSH I + A GSD QF
Sbjct 14 LIVGDHRSVVLENRGGPPGEALLSRVAADIGSAVEAVEAFWGTDWSHHIRLTATGSDRQF 73
Query 81 HAAAGG--GLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHEL 138
AGG G +QW+D+AA+ V DRVDP RR GQRIVFAPGAA MS ALRIVL HEL
Sbjct 74 ATLAGGAAGDVTQWSDVAAVAVADRVDPERRVAAGQRIVFAPGAAAMSTPALRIVLSHEL 133
Query 139 FHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS--LPSDTDLDTPGPQRSL 196
FHYAARADTALDAPRWL EGVADFVARP P + + LPSD DL PGP+RS
Sbjct 134 FHYAARADTALDAPRWLVEGVADFVARPAREPAGAPPAPLATADLPSDADLVVPGPRRSQ 193
Query 197 AYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRW 254
AYDRAW FARFVAA +G AKLRELYL+ CG GH + A A VLG+D LLA WQ+W
Sbjct 194 AYDRAWHFARFVAARFGPAKLRELYLSACGPGHVEPAVAVPLVLGVDLPDLLAGWQQW 251
>gi|118473864|ref|YP_888532.1| hypothetical protein MSMEG_4255 [Mycobacterium smegmatis str.
MC2 155]
gi|118175151|gb|ABK76047.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=265
Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 136/248 (55%), Positives = 156/248 (63%), Gaps = 20/248 (8%)
Query 13 APADG--FVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIF 70
APAD + D RT RLL+LGG TD LL RI + A D V AFWG DW +I
Sbjct 35 APADAAPVQTFTLPDGRTARLLTLGGPQTDVLLDRIRDELLGAADAVTAFWGPDWPREID 94
Query 71 VVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAAL 130
+ AG+ EQF G G ADIAAIT DR IVFAPGAA MSPAAL
Sbjct 95 IAVAGTPEQFRVLGGVG-----ADIAAITTADR------------IVFAPGAATMSPAAL 137
Query 131 RIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALS-LPSDTDLDT 189
RIVL HELFHYAAR+ TA DAPRWL EGVAD+VARP P P + L+ LP+D DLDT
Sbjct 138 RIVLRHELFHYAARSVTAYDAPRWLTEGVADYVARPDAPRPGPQAAQMLARLPTDADLDT 197
Query 190 PGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLA 249
PG RS AYDRAWWF R+VA AYG AKLR+LY+ CG H D+ATA LG + ++
Sbjct 198 PGSTRSTAYDRAWWFTRYVADAYGPAKLRDLYVRACGFDHPDIATAVRTSLGAELDAVVD 257
Query 250 RWQRWLMG 257
W+RW+ G
Sbjct 258 GWRRWMSG 265
>gi|108800252|ref|YP_640449.1| hypothetical protein Mmcs_3286 [Mycobacterium sp. MCS]
gi|119869380|ref|YP_939332.1| hypothetical protein Mkms_3348 [Mycobacterium sp. KMS]
gi|108770671|gb|ABG09393.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695469|gb|ABL92542.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=275
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/248 (51%), Positives = 151/248 (61%), Gaps = 20/248 (8%)
Query 10 QVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDI 69
Q A + ++ D R + ++LGG + LLSRIA + AA + V FWG DW +I
Sbjct 48 QPTATGTPTIDTQLPDGRRAQFVALGGTRSAGLLSRIAGELPAAAELVTDFWGPDWRQEI 107
Query 70 FVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAA 129
+VA GSD QF A AGGG+ DIAA T DR IVFAPGAA M+
Sbjct 108 VIVATGSDPQFAALAGGGV-----DIAAATTADR------------IVFAPGAAAMTDED 150
Query 130 LRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDT 189
LRIVL HELFH+A R TA DAPRWL EGVAD +ARP+T P DA + +LP+D+DLDT
Sbjct 151 LRIVLRHELFHHAVREQTAADAPRWLTEGVADHLARPRTTPAPDAET---ALPTDSDLDT 207
Query 190 PGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLA 249
PG RS AYDRAW FA +VA YG +LR LYL CG GH D+ATA D LG +LA
Sbjct 208 PGAVRSQAYDRAWRFATYVADRYGPERLRALYLRACGPGHPDVATAVRDTLGAGLDEVLA 267
Query 250 RWQRWLMG 257
W+ W G
Sbjct 268 GWRHWPQG 275
>gi|126435875|ref|YP_001071566.1| hypothetical protein Mjls_3297 [Mycobacterium sp. JLS]
gi|126235675|gb|ABN99075.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=276
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/248 (51%), Positives = 148/248 (60%), Gaps = 19/248 (7%)
Query 10 QVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDI 69
Q A + ++ D R + ++LGG + LLSRIA + AA + V FWG DW +I
Sbjct 48 QPTATGTPTIDTQLPDGRRAQFVALGGTRSAGLLSRIAGELPAAAELVTDFWGPDWRQEI 107
Query 70 FVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAA 129
+VA GSD QF A AGGG+ DIAA T DR IVFAPGAA M+
Sbjct 108 VIVATGSDPQFAALAGGGV-----DIAAATTADR------------IVFAPGAAAMTDED 150
Query 130 LRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDT 189
LRIVL HELFH+A R TA DAPRWL EGVAD +ARP+ PA AL P+D+DLDT
Sbjct 151 LRIVLRHELFHHAVREQTAADAPRWLTEGVADHLARPRDTTPAPDAGTAL--PTDSDLDT 208
Query 190 PGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLA 249
PG RS AYDRAW FA +VA YG +LR LYL CG GH D+ATA D LG +LA
Sbjct 209 PGAVRSQAYDRAWRFATYVADRYGPERLRALYLRACGPGHPDVATAVRDTLGAGLDEVLA 268
Query 250 RWQRWLMG 257
W+ W G
Sbjct 269 GWRHWPQG 276
>gi|336461911|gb|EGO40764.1| hypothetical protein MAPs_25821 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=132
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/131 (75%), Positives = 107/131 (82%), Gaps = 1/131 (0%)
Query 125 MSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSD 184
MSPA+LRIVL HELFHYA+RADT DAPRWL EGVADFV RP P PADA+ + L+LPSD
Sbjct 1 MSPASLRIVLAHELFHYASRADTVADAPRWLTEGVADFVGRPPAPVPADAL-LPLTLPSD 59
Query 185 TDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDA 244
TDLD PGPQRS AYDRAWWFARFVA +YG KLRELYLATCG+ DLATAA +VLG
Sbjct 60 TDLDVPGPQRSSAYDRAWWFARFVADSYGPPKLRELYLATCGLRRADLATAAQEVLGTSP 119
Query 245 AGLLARWQRWL 255
AGLL RW +WL
Sbjct 120 AGLLTRWHQWL 130
>gi|120404523|ref|YP_954352.1| hypothetical protein Mvan_3551 [Mycobacterium vanbaalenii PYR-1]
gi|119957341|gb|ABM14346.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=275
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/227 (53%), Positives = 139/227 (62%), Gaps = 21/227 (9%)
Query 23 VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHA 82
AD RT +++ LGG L RIAA + AA + V AFWG W DI +V AGS EQF
Sbjct 67 TADGRTAQIIDLGGEG-GAALDRIAAELPAATEAVTAFWGPQWRRDITIVLAGSAEQFAT 125
Query 83 AAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYA 142
AGGG AD+AA T +RI+F+P AA M+ A LR VL HELFHYA
Sbjct 126 LAGGG-----ADVAA------------TTTPERIMFSPAAAGMNTADLRTVLRHELFHYA 168
Query 143 ARADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAW 202
ARADTA DAP WL EGVADFV RP A+ SLP+D +L TPGP RS AYDRAW
Sbjct 169 ARADTAADAPVWLTEGVADFVGRPPA---AEPPGAPASLPTDAELATPGPGRSDAYDRAW 225
Query 203 WFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLA 249
FA +AA YG KLR LY+A CG GH D+ TA +VLG D + L A
Sbjct 226 QFASHIAATYGVEKLRALYVAACGHGHADVDTAVREVLGADLSTLSA 272
>gi|145223547|ref|YP_001134225.1| hypothetical protein Mflv_2960 [Mycobacterium gilvum PYR-GCK]
gi|145216033|gb|ABP45437.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=283
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/225 (48%), Positives = 121/225 (54%), Gaps = 20/225 (8%)
Query 25 DDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAA 84
D RT +L LG LL RIAA + +A V AFWG W DI +V AG+ QF
Sbjct 77 DGRTAQLADLGAPGGGALLDRIAAELPSATAAVTAFWGPQWPRDIPIVVAGTTGQFATLG 136
Query 85 GGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAAR 144
GGG D T QRI FAPGA M A LR V+ HELFHYAAR
Sbjct 137 GGG-----------------DGIAATTTAQRITFAPGATAMDDADLRTVVRHELFHYAAR 179
Query 145 ADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWF 204
ADTA DAP W EGVAD+VARP A + PSD ++ PGP R AYDRAW F
Sbjct 180 ADTAADAPVWFTEGVADYVARPPA---ATPPAAPRGFPSDAEMAAPGPARDEAYDRAWEF 236
Query 205 ARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLA 249
A +VA YG LR LY+A CG GH D A VLG++ A L A
Sbjct 237 ASYVAGVYGEDTLRALYVAACGHGHADFDGAVRTVLGVEPASLWA 281
>gi|315443894|ref|YP_004076773.1| hypothetical protein Mspyr1_22930 [Mycobacterium sp. Spyr1]
gi|315262197|gb|ADT98938.1| hypothetical protein Mspyr1_22930 [Mycobacterium sp. Spyr1]
Length=257
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/225 (48%), Positives = 121/225 (54%), Gaps = 20/225 (8%)
Query 25 DDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAA 84
D RT +L LG LL RIAA + +A V AFWG W DI +V AG+ QF
Sbjct 51 DGRTAQLADLGAPGGGALLDRIAAELPSATAAVTAFWGPQWPRDIPIVVAGTTGQFATLG 110
Query 85 GGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAAR 144
GGG D T QRI FAPGA M A LR V+ HELFHYAAR
Sbjct 111 GGG-----------------DGIAATTTAQRITFAPGATAMDDADLRTVVRHELFHYAAR 153
Query 145 ADTALDAPRWLAEGVADFVARPKTPPPADAVSVALSLPSDTDLDTPGPQRSLAYDRAWWF 204
ADTA DAP W EGVAD+VARP A + PSD ++ PGP R AYDRAW F
Sbjct 154 ADTAADAPVWFTEGVADYVARPPA---ATPPAAPRGFPSDAEMAAPGPARDEAYDRAWEF 210
Query 205 ARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLA 249
A +VA YG LR LY+A CG GH D A VLG++ A L A
Sbjct 211 ASYVAGVYGEDTLRALYVAACGHGHADFDGAVRTVLGVEPASLWA 255
>gi|226360265|ref|YP_002778043.1| hypothetical protein ROP_08510 [Rhodococcus opacus B4]
gi|226238750|dbj|BAH49098.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=455
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/237 (38%), Positives = 119/237 (51%), Gaps = 18/237 (7%)
Query 34 LGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWA 93
LG ++ R+A + AAV WG+DW+ V AGS ++F A G +
Sbjct 217 LGHPENVTMVDRLAEELPAAVVNATQLWGSDWAGRALVWVAGSQDEFTALVGSDHDGR-- 274
Query 94 DIAAITVVDRVDPARRTVVGQRIVFAPGAA-HMSPAALRIVLGHELFHYAARADTALDAP 152
IAA+ + D VDP GQRIVF+P +A ++ R +L HEL H AARA+T +P
Sbjct 275 GIAAVAISDAVDPGAGAATGQRIVFSPSSADRLTDVTRRAILRHELIHVAARAETVDRSP 334
Query 153 RWLAEGVADFVARPKTPPPADAVSVALS-----------LPSDTDLDTPGPQRSLAYDRA 201
W+ EG A++ A T PA ++ AL+ P +TD G + S+AY+ A
Sbjct 335 MWVLEGYAEYAAYRGTGEPARQIAPALTAQVGAEGPPTGFPENTDFSESGERGSVAYETA 394
Query 202 WWFARFVAAAYGTAKLRELYLATCGVGHFDLATA---AHDVLGIDAAGLLARWQRWL 255
W FVA YG KL ELY T VG D T DVLG+DAA RW W+
Sbjct 395 WSINAFVAEQYGETKLTELYR-TLAVGESDSDTIDARLSDVLGVDAAQFRDRWTDWV 450
>gi|169629062|ref|YP_001702711.1| hypothetical protein MAB_1975 [Mycobacterium abscessus ATCC 19977]
gi|169241029|emb|CAM62057.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=393
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/241 (40%), Positives = 125/241 (52%), Gaps = 19/241 (7%)
Query 26 DRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAG 85
D+ V +L GA +L RIA + A+ + FWG + VAAG++ +F A G
Sbjct 155 DKKVVVLGHPGA---QLAPRIADEVGGAMRSLSEFWGPQGYPGVLFVAAGTEAEFAALVG 211
Query 86 GGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARA 145
G IAA V DRVD VGQR+V APGAA + R+VL HELFH AAR
Sbjct 212 G---EHTEGIAAAAVADRVDGG--IAVGQRVVVAPGAAALPADQFRVVLRHELFHAAART 266
Query 146 DTALDAPRWLAEGVADFVARPKTPPP----ADAVSVALS-------LPSDTDLDTPGPQR 194
T AP WL EGVAD+ R + P A ++ AL+ LP+D +LD G +R
Sbjct 267 VTGDHAPLWLVEGVADYNGRRGSGTPFRNAAPTLANALASGQVPDHLPTDEELDNAGTRR 326
Query 195 SLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRW 254
+ AY+ AW A++VA +G +L LY G+ A LG+D A L+ +WQ W
Sbjct 327 TQAYEEAWSVAQYVAETFGEPRLVRLYRDGAGLAPQPRGAAIQRALGVDEATLVRQWQGW 386
Query 255 L 255
L
Sbjct 387 L 387
>gi|343924177|ref|ZP_08763740.1| hypothetical protein GOALK_002_01310 [Gordonia alkanivorans NBRC
16433]
gi|343765982|dbj|GAA10666.1| hypothetical protein GOALK_002_01310 [Gordonia alkanivorans NBRC
16433]
Length=466
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/219 (42%), Positives = 110/219 (51%), Gaps = 18/219 (8%)
Query 53 AVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVV 112
AVD V AFWG W +V ++F A G G A AA TV RVD RRT +
Sbjct 249 AVDAVTAFWGESWDRRAVLVTTSDQDEFAALVGQGGAI--GAAAAATVYSRVDFPRRTAI 306
Query 113 GQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKT---- 168
GQR+VF P A ++P L +VL HEL H AARA TALDAP W+ EGVA++V R T
Sbjct 307 GQRVVFTPAADDLAPPTLAVVLRHELTHVAARAQTALDAPLWITEGVAEYVGRKGTYRRL 366
Query 169 ----PPPADAV---SVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELY 221
P + V + +LP D GP LAY AW A +VA YG +L+ Y
Sbjct 367 ADAAPDLTETVRAGNTPTALPDDAAFAMDGPTSQLAYQSAWSMAAYVADRYGEERLKRFY 426
Query 222 L---ATCGVGHFDLATAAHDVLGIDAAGLLARWQRWLMG 257
L AT D A A LG+ L+ W RWL G
Sbjct 427 LGVSATADPARQDAAIRA--ALGVSRYELVTGWGRWLEG 463
>gi|111018136|ref|YP_701108.1| hypothetical protein RHA1_ro01123 [Rhodococcus jostii RHA1]
gi|110817666|gb|ABG92950.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=453
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/237 (37%), Positives = 120/237 (51%), Gaps = 18/237 (7%)
Query 34 LGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWA 93
LG ++ R+A + AAV WG++W+ V AGS ++F A G +
Sbjct 215 LGHPENATMVDRLADELPAAVVNATQLWGSNWAGRALVWVAGSQDEFTALVGPNHDGR-- 272
Query 94 DIAAITVVDRVDPARRTVVGQRIVFAPGAA-HMSPAALRIVLGHELFHYAARADTALDAP 152
DIAA+ + D VDP TV GQRIVF+P +A ++ R +L HEL H AARA+T +P
Sbjct 273 DIAAVAISDAVDPDAATVTGQRIVFSPASADRLTEVTRRAILRHELIHVAARAETVDRSP 332
Query 153 RWLAEGVADFVARPKTPPPADAVSVALS-----------LPSDTDLDTPGPQRSLAYDRA 201
W+ EG A++ A T ++ AL+ P DTD G + S+AY+ A
Sbjct 333 MWVLEGYAEYAAYRGTGEAERQIAPALTAQVGAEGPPTEFPEDTDFSGYGERGSVAYETA 392
Query 202 WWFARFVAAAYGTAKLRELYLATCGVGHFD---LATAAHDVLGIDAAGLLARWQRWL 255
W FVA YG ++L ELY T VG D + DVLG+DA RW W+
Sbjct 393 WSINAFVAEQYGESRLTELYR-TLAVGEGDPEAVDGRLSDVLGVDADQFRGRWTDWV 448
>gi|336461912|gb|EGO40765.1| hypothetical protein MAPs_25822 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=144
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/130 (57%), Positives = 87/130 (67%), Gaps = 12/130 (9%)
Query 2 RDGPAAPAQVVAPADGFVALR----VADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEV 57
RDG PAQ+V+P + V DRTVRLL LGG A+DRLL+R+AAG+ AA+ V
Sbjct 18 RDGRTRPAQLVSPVRSQFSASSRSLVVGDRTVRLLGLGGPASDRLLARVAAGMGAAITAV 77
Query 58 VAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIV 117
AFWG DWS +I VVAAG DE+F AAAGGG A+QWADIAA+TV DRVDP RR
Sbjct 78 EAFWGADWSREISVVAAGIDEEFRAAAGGGPATQWADIAAVTVSDRVDPVRR-------- 129
Query 118 FAPGAAHMSP 127
P +A SP
Sbjct 130 IDPASASCSP 139
>gi|326382527|ref|ZP_08204218.1| hypothetical protein SCNU_06295 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198646|gb|EGD55829.1| hypothetical protein SCNU_06295 [Gordonia neofelifaecis NRRL
B-59395]
Length=467
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/261 (36%), Positives = 123/261 (48%), Gaps = 33/261 (12%)
Query 18 FVALRVADDRTVRLLSLGGAAT-------DRLLSRIAAGIDAAVDEVVAFWGTDWSHDIF 70
F L D RT GG +T +R + +A + AVD V FWG DW
Sbjct 211 FPGLEATDSRTS-----GGTSTVLDYRGAERTAADVAQILPGAVDAVSEFWGDDWVRRAA 265
Query 71 VVAAGSDEQF----HAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMS 126
V+A D QF A G A+ AA TV ++D + V+GQRIV P A +S
Sbjct 266 VIATADDAQFAGLTRTAPGDTSAA-----AAATVFTKIDRQNQQVIGQRIVLTPSARQLS 320
Query 127 PAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKT-----------PPPADAV 175
AL ++L HEL H A+R TA +AP WL EGV ++V R T A
Sbjct 321 KPALAVILRHELTHVASRLSTAQNAPLWLTEGVPEYVGRKGTYRDLVDAAPELAAAVAAG 380
Query 176 SVALSLPSDTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATA 235
V +LPSD +AY AW FA +VA YG KL+++Y+ G + A
Sbjct 381 DVPKALPSDGAFSVSTDAARVAYQAAWSFAAYVAGKYGEEKLKKMYVEVGKGGDTETTDA 440
Query 236 A-HDVLGIDAAGLLARWQRWL 255
A D LG+D + ++A WQ WL
Sbjct 441 AMKDALGVDKSKVVADWQAWL 461
>gi|262202940|ref|YP_003274148.1| hypothetical protein Gbro_3048 [Gordonia bronchialis DSM 43247]
gi|262086287|gb|ACY22255.1| hypothetical protein Gbro_3048 [Gordonia bronchialis DSM 43247]
Length=462
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/234 (40%), Positives = 112/234 (48%), Gaps = 18/234 (7%)
Query 35 GGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWAD 94
G AAT L R+ G AV V AFWG+DW VV G +F A A +
Sbjct 231 GTAATVGHLPRLLPG---AVAVVTAFWGSDWPQRAAVVTTGRPAEFEALA---SGATGPG 284
Query 95 IAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALDAPRW 154
AA TV DR+D RT VG R+V P A + AL +VL HEL H AAR TA+ AP W
Sbjct 285 AAAATVFDRIDTRNRTAVGVRVVLTPQARALPEPALGVVLRHELTHVAARTSTAVGAPMW 344
Query 155 LAEGVADFVARPKT--------PPPADAV---SVALSLPSDTDLDTPGPQRSLAYDRAWW 203
+ EGV ++V R T P AD + LP D + GP LAY AW
Sbjct 345 ITEGVPEYVGRKGTYRRFADAAPQLADRIIEDGPPGRLPEDAEFAVAGPDSQLAYQSAWS 404
Query 204 FARFVAAAYGTAKLRELYLATCGVGHFDLAT-AAHDVLGIDAAGLLARWQRWLM 256
FA FVA + +LR+LYL G A LGI L+ W+RWL+
Sbjct 405 FAAFVAQKWDEPRLRQLYLGVAGTADTARQNDAIRATLGIGRDALVTEWRRWLV 458
>gi|325676939|ref|ZP_08156611.1| hypothetical protein HMPREF0724_14394 [Rhodococcus equi ATCC
33707]
gi|325552239|gb|EGD21929.1| hypothetical protein HMPREF0724_14394 [Rhodococcus equi ATCC
33707]
Length=428
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/254 (37%), Positives = 120/254 (48%), Gaps = 17/254 (6%)
Query 17 GFVALRVADDRTVR-LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAG 75
G V +R D R LG ++ +A+ + AV V WG DWS V+ AG
Sbjct 172 GPVTVRRVDGEEGRPSFVLGPTTQAPMIDLLASEVGDAVGHVTDVWGEDWSRRAVVMVAG 231
Query 76 SDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRI-VL 134
S E+F + G + ADIAA+ V D VD RT GQRIVF+P +A R+ VL
Sbjct 232 SQEEFSSLVGSDHSG--ADIAAVAVSDAVDRRSRTASGQRIVFSPESAGRLTDLTRVSVL 289
Query 135 GHELFHYAARADTALDAPRWLAEGVADFV------ARPKTPPPADAVSVALS-----LPS 183
HEL H AAR T +P W+ EG AD+V A+ P A VA S LP
Sbjct 290 RHELTHIAARPVTEDGSPMWMLEGYADYVGYRGIEAQFGQLAPTLAADVAKSGPPSRLPV 349
Query 184 DTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELY--LATCGVGHFDLATAAHDVLG 241
D D G LAY+ +W A F+A+ YG +L LY LA V +L VLG
Sbjct 350 DGDFRGGGDTARLAYESSWSLATFIASQYGEGQLGALYRELARGPVADAELDRRIRSVLG 409
Query 242 IDAAGLLARWQRWL 255
+ L+ W W+
Sbjct 410 VGTDELVHSWGVWV 423
>gi|312140179|ref|YP_004007515.1| hypothetical protein REQ_28160 [Rhodococcus equi 103S]
gi|311889518|emb|CBH48835.1| hypothetical protein REQ_28160 [Rhodococcus equi 103S]
Length=428
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/254 (37%), Positives = 120/254 (48%), Gaps = 17/254 (6%)
Query 17 GFVALRVADDRTVR-LLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAG 75
G V +R D R LG ++ +A+ + AV V WG DWS V+ AG
Sbjct 172 GPVTVRRVDGEEGRPSFVLGPTTQAPMIDLLASEVGDAVGHVTDVWGEDWSRRAVVMVAG 231
Query 76 SDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHMSPAALRI-VL 134
S E+F + G + ADIAA+ V D VD RT GQRIVF+P +A R+ VL
Sbjct 232 SQEEFSSLVGSDHSG--ADIAAVAVSDAVDRRSRTASGQRIVFSPESAGRLTDLTRVSVL 289
Query 135 GHELFHYAARADTALDAPRWLAEGVADFV------ARPKTPPPADAVSVALS-----LPS 183
HEL H AAR T +P W+ EG AD+V A+ P A VA S LP
Sbjct 290 RHELTHIAARPVTEDGSPMWMLEGYADYVGYRGVEAQFGQLAPTLAADVAKSGPPSRLPV 349
Query 184 DTDLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELY--LATCGVGHFDLATAAHDVLG 241
D D G LAY+ +W A F+A+ YG +L LY LA V +L VLG
Sbjct 350 DGDFRGGGDTARLAYESSWSLATFIASQYGEGQLGALYRELARGPVADAELDRRIRSVLG 409
Query 242 IDAAGLLARWQRWL 255
+ L+ W W+
Sbjct 410 VGTDELVHSWGVWV 423
>gi|134098275|ref|YP_001103936.1| hypothetical protein SACE_1693 [Saccharopolyspora erythraea NRRL
2338]
gi|291004305|ref|ZP_06562278.1| hypothetical protein SeryN2_07277 [Saccharopolyspora erythraea
NRRL 2338]
gi|133910898|emb|CAM01011.1| hypothetical protein SACE_1693 [Saccharopolyspora erythraea NRRL
2338]
Length=428
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/240 (36%), Positives = 118/240 (50%), Gaps = 19/240 (7%)
Query 32 LSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQ 91
L +G L+ R+A +D + D V WGTDW+ + V+ + ++ + G A
Sbjct 189 LVVGHDDNRELVERVAGMLDESADRVSRVWGTDWARRVAVLLPSTGDELRSLVGAEFAVD 248
Query 92 WADIAAITVVDRVDPARRTVVGQRIVFAP-GAAHMSPAALRIVLGHELFHYAARADTALD 150
IAA+ V D VD + R V G RIV P AA +S AL +VL HE+ H AARADTA
Sbjct 249 --GIAAVAVADGVDTSARRVEGPRIVLNPMTAAGLSDTALGVVLRHEITHVAARADTADG 306
Query 151 APRWLAEGVADFVARPKTPPPADAVSVALS-----------LPSDTDLDTPGPQRSLAYD 199
AP W+ EG AD+V + + V+ L+ LPSD D G + LAY
Sbjct 307 APMWMLEGFADYVGYRDSGIAPEHVAPELARQVRGGGPPADLPSDRDFHLAGRRLDLAYQ 366
Query 200 RAWWFARFVAAAYGTAKLRELYLATCGV---GHFDLATAAHDVLGIDAAGLLARWQRWLM 256
+AW ++A G +L LY G G D+A +V G+ A LLA W+ L+
Sbjct 367 QAWSVVGYLAGRVGEQRLVLLYRRVAGSSSPGAVDVAL--REVAGMSTAQLLAGWREHLV 424
>gi|54023687|ref|YP_117929.1| hypothetical protein nfa17190 [Nocardia farcinica IFM 10152]
gi|54015195|dbj|BAD56565.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=326
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/212 (39%), Positives = 105/212 (50%), Gaps = 16/212 (7%)
Query 57 VVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRI 116
V WG DWS + VVAA + +F AA A++AA +V D P R GQR+
Sbjct 113 VTDLWGPDWSREAVVVAAANPSEF-AALLRAPDLLPAEVAAASVADPFRPGTRPT-GQRV 170
Query 117 VFAPGAA-HMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVAR-------PKT 168
VFAP A +SPA LR +L HEL H AARA T AP+W+ EG A++ A
Sbjct 171 VFAPDAGTRLSPAELRTLLRHELTHVAARAQTVDGAPQWMLEGFAEYAAHRGLGSSFAAI 230
Query 169 PPPADAVSVALSLPSDTDLDT--PGPQRSLAYDRAWWFARFVAAAYGTAKLRELYLATCG 226
P A + LP+D D G LAY++AW + FVA YG +L LY A
Sbjct 231 APTVLAAAQRGDLPADLPADAAFTGAGAVLAYEQAWTVSAFVADRYGEDRLVRLYRAVA- 289
Query 227 VGHFDLA---TAAHDVLGIDAAGLLARWQRWL 255
G D A +VLG D +ARW+ W+
Sbjct 290 AGRLDTAGEDRVLREVLGTDRTAFVARWREWV 321
>gi|226307075|ref|YP_002767035.1| hypothetical protein RER_35880 [Rhodococcus erythropolis PR4]
gi|226186192|dbj|BAH34296.1| hypothetical protein RER_35880 [Rhodococcus erythropolis PR4]
Length=452
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/251 (33%), Positives = 115/251 (46%), Gaps = 16/251 (6%)
Query 18 FVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSD 77
F L VA++ L +G + +AA +D+A++ WG WS ++ AGS
Sbjct 198 FGPLAVAENAAGNALVIGHPGQQAFVDALAADVDSAIENTTQLWGPWWSERAVLMVAGSA 257
Query 78 EQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAA-HMSPAALRIVLGH 136
E+F A G A IAA++V D V GQR+VF+P AA ++ R VL H
Sbjct 258 EEFTALVGS--HHDGASIAAVSVADATADGSSDVSGQRVVFSPAAASRLTDITRRTVLRH 315
Query 137 ELFHYAARADTALDAPRWLAEGVADFVARPKT--------PPPADAV---SVALSLPSDT 185
EL H AAR+ T +P W+ EG A++ + P A AV P DT
Sbjct 316 ELMHIAARSKTRDGSPMWVLEGFAEYAGNRGSSRAWGEIAPTLAAAVRSGDTPTEFPDDT 375
Query 186 DLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELY--LATCGVGHFDLATAAHDVLGID 243
SLAY+ AW ++A +G AKL +L+ LA+ + DL + VLG+
Sbjct 376 QFGGVPVVSSLAYESAWSINAYIADRFGEAKLTDLFRALASGKMTAEDLDSRIRAVLGVG 435
Query 244 AAGLLARWQRW 254
L W W
Sbjct 436 TEELRVGWVDW 446
>gi|229490342|ref|ZP_04384183.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322632|gb|EEN88412.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=428
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/251 (33%), Positives = 115/251 (46%), Gaps = 16/251 (6%)
Query 18 FVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSD 77
F L VA++ L +G + +AA D+A++ WG WS ++ AGS
Sbjct 174 FGPLAVAENSAGNALVIGHPGQQAFVDALAADADSAIENTTQLWGPWWSERAVLMVAGSA 233
Query 78 EQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAA-HMSPAALRIVLGH 136
E+F A G A IAA++V D V GQR+VF+P AA ++ R VL H
Sbjct 234 EEFTALVGS--HHDGASIAAVSVADATADGSSDVSGQRVVFSPAAASRLTDITRRTVLRH 291
Query 137 ELFHYAARADTALDAPRWLAEGVADFVARPKT--------PPPADAV---SVALSLPSDT 185
EL H AAR+ T +P W+ EG A++ + P A AV P DT
Sbjct 292 ELMHIAARSKTRDGSPMWVLEGFAEYAGNRGSSRAWGEIAPTLAAAVRSGDTPTEFPDDT 351
Query 186 DLDTPGPQRSLAYDRAWWFARFVAAAYGTAKLRELY--LATCGVGHFDLATAAHDVLGID 243
SLAY+ AW ++A +G AKL +L+ LA+ + DL + V+G+
Sbjct 352 QFSGVPVVSSLAYESAWSINAYIADRFGEAKLTDLFRALASGKMTAEDLDSRIRAVVGVG 411
Query 244 AAGLLARWQRW 254
L A W W
Sbjct 412 TEELRAGWVDW 422
>gi|256375519|ref|YP_003099179.1| hypothetical protein Amir_1381 [Actinosynnema mirum DSM 43827]
gi|255919822|gb|ACU35333.1| hypothetical protein Amir_1381 [Actinosynnema mirum DSM 43827]
Length=410
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/190 (36%), Positives = 86/190 (46%), Gaps = 17/190 (8%)
Query 44 SRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDR 103
+R A +D AVD V G W + V+ D + A G G AS +AA+ V D
Sbjct 183 ARALAELDDAVDAVTEVLGPRWGGRVAVLVPSGDAELRALVGDGFAS--GGLAAVAVSDP 240
Query 104 VDPARRTVVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADF 162
V P + GQR+V P A + R++L HE+ H A RA AP WL EG AD
Sbjct 241 VVPGQ-APTGQRVVLNPAVVAPLPDVQFRVLLRHEITHVATRASVVDGAPMWLLEGFADH 299
Query 163 VARPKTPPPADAVSVAL-----------SLPSDTDLDTPGPQRSLAYDRAWWFARFVAAA 211
V + PAD V+ AL +LP D D G LAY AW F +A A
Sbjct 300 VGHRGSGLPADQVAPALAARVRAGDPPSALPPDADFRGAG--IDLAYQEAWSFVEHLARA 357
Query 212 YGTAKLRELY 221
+G L L+
Sbjct 358 HGEPALLALH 367
>gi|302534014|ref|ZP_07286356.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302442909|gb|EFL14725.1| conserved hypothetical protein [Streptomyces sp. C]
Length=325
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/270 (36%), Positives = 117/270 (44%), Gaps = 31/270 (11%)
Query 2 RDGPAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFW 61
R P APAQ+ D A R L LG + R LS +A G D AV V A W
Sbjct 66 RPAPGAPAQLWDQGD------PAAVRGAHSLVLGVGRSPRELSALADGADRAVPAVSAAW 119
Query 62 GTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVD---PARRTVVGQRIVF 118
W + V+A + AA G A + + A+T PA R VV
Sbjct 120 PGPWVFWVVVMAPATLFAM-AALLGRPADTYRGLGAVTTGSTGGGPAPADRVVVNPE--- 175
Query 119 APGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKT--------PP 170
G A +S A RIVL HE+ H A RA T+ P+WL+EG AD+ A T P
Sbjct 176 --GYAGLSEAGRRIVLTHEVTHVATRAATSARTPQWLSEGFADWAAYRGTGTTPAEGAPE 233
Query 171 PADAVS---VALSLPSDTDLDTPGPQR--SLAYDRAWWFARFVAAAYGTAKLRELYLATC 225
A AV + +LP+D D G + AY+ AW R VAA +G A L LY
Sbjct 234 LARAVRRGDLPGALPADGDFAFGGDPSAAARAYEGAWLACRLVAARWGEAALVRLYEL-- 291
Query 226 GVGHFDLATAAHDVLGIDAAGLLARWQRWL 255
G L A LG D AGL A WQ L
Sbjct 292 -AGREPLPVALEQALGTDPAGLTAAWQETL 320
>gi|333918961|ref|YP_004492542.1| hypothetical protein AS9A_1290 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481182|gb|AEF39742.1| hypothetical protein AS9A_1290 [Amycolicicoccus subflavus DQS3-9A1]
Length=444
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (31%), Positives = 94/205 (46%), Gaps = 20/205 (9%)
Query 32 LSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQ 91
L LG ++S A ++ A+++V FW ++W + V + ++E+F A GG
Sbjct 204 LVLGHPGDQDVVSDTVAELEEALEDVDRFWRSEWEGRVVVFVSQTEEEFSALTGGA---- 259
Query 92 WADIAAITVVDRVDPARRT---VVGQRIVFAPGAAHMSPAALR-IVLGHELFHYAARADT 147
D A+ V DP R + GQRIV + P R +VL HEL H R T
Sbjct 260 -HDNASAAAVAIADPERDSSGAATGQRIVLSAPVMRTLPDEARAVVLRHELSHVVTRPKT 318
Query 148 ALDAPRWLAEGVADFVARPK---TPPPADAVSVAL--------SLPSDTDLDTPGPQRSL 196
+P WL EG A++ R T ++ AL +LP D G +L
Sbjct 319 GQSSPLWLLEGTAEYAGRATAGVTLHEGASMVRALVRQFGPPDTLPRDDHFQAGGETSAL 378
Query 197 AYDRAWWFARFVAAAYGTAKLRELY 221
AY+ AW F+ ++A +G A+L +Y
Sbjct 379 AYELAWTFSVYLAETFGEAELPRVY 403
>gi|337765274|emb|CCB73983.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=383
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/232 (34%), Positives = 102/232 (44%), Gaps = 18/232 (7%)
Query 36 GAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADI 95
G+ T L R A+ DAAV V A W W VV +DE AA G S + I
Sbjct 153 GSGTPDALRRYASLADAAVPVVRAAWPGPWPGKA-VVEVPADEAGMAALLGAAPSAYQGI 211
Query 96 AAITVVDRVDPARRTVVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARADTALDAPRW 154
AA+T + A T R++ P A A +S +VL HE+ H A R T P W
Sbjct 212 AAVTTAELRGSA--TAPADRVIVNPQAFAGLSALGRTVVLTHEITHVATRKATTAGTPLW 269
Query 155 LAEGVADFVA------RPKTPPPADAVSVAL-----SLPSDTDLDTPGPQRSLAYDRAWW 203
L+EG AD+V P+ P A V +LP+ D T + AY+ AW
Sbjct 270 LSEGFADWVGYTGTGRTPRQAAPELAADVVAGHPPRALPATADFGTTSGGLAQAYEGAWL 329
Query 204 FARFVAAAYGTAKLRELYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWL 255
R +A +G+ +L LY A G D TA LG+ ARW+ +L
Sbjct 330 ACRMIAGTWGSGRLTALYQA---AGRMDTDTALRRTLGLGLDAFTARWRAYL 378
>gi|344999167|ref|YP_004802021.1| hypothetical protein SACTE_1565 [Streptomyces sp. SirexAA-E]
gi|344314793|gb|AEN09481.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E]
Length=396
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/245 (33%), Positives = 101/245 (42%), Gaps = 19/245 (7%)
Query 27 RTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGG 86
R L LG + L RIA D AV V W W + V+ S E A
Sbjct 150 RGAHSLVLGVGRRTQELRRIADIADRAVPAVGESWPEPWDRQVVVLVPESVEDM-AGLLD 208
Query 87 GLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGAAHM-SPAALRIVLGHELFHYAARA 145
A+ + IAA+T + RR R++ P A M R+VL HE H A RA
Sbjct 209 SPAASYRGIAAVTTGEVGGSGRRPA--DRVIVNPQAYGMLGEFGQRVVLTHETTHVATRA 266
Query 146 DTALDAPRWLAEGVADFVARPKT--------PPPADAV---SVALSLPSDTDLDTPGPQR 194
DT+ P WL+EG ADF A + P DAV + SLP+D D G
Sbjct 267 DTSAATPVWLSEGFADFTAYRQEARSAQELAPELTDAVRRGELPASLPADEDFGFGGDAA 326
Query 195 SL--AYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLAT--AAHDVLGIDAAGLLAR 250
+L AY+ W +A +G +L Y A G D A A VLG AR
Sbjct 327 ALARAYEGGWLACELIAEEWGEEELIAFYRAVGGRSTRDGAVEHALQSVLGTTPEDFTAR 386
Query 251 WQRWL 255
W+ +L
Sbjct 387 WREYL 391
>gi|291440132|ref|ZP_06579522.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291343027|gb|EFE69983.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=316
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/247 (33%), Positives = 102/247 (42%), Gaps = 23/247 (9%)
Query 27 RTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGG 86
R R L LG TD L A D AV V WG DW + V+ S E A G
Sbjct 70 RGERGLVLGVGRTDAELRDYAGLADRAVPAVSDAWGPDWPRSVVVLVPRSLEGM-AGLLG 128
Query 87 GLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARA 145
AS + IAA+T + R RI+ P A + + ++VL HE H A RA
Sbjct 129 SPASSYRGIAAVTTGETGTGPR--APADRIIVNPDAFGLLGDSGRQVVLTHEATHVATRA 186
Query 146 DTALDAPRWLAEGVADFVAR--------PKTPPPADAVS---VALSLPSDTDLDTPGPQR 194
T+ P WL+EG AD+V P A AVS V +LP+D D G
Sbjct 187 HTSAATPLWLSEGFADWVGHRGGGHAPAETAPELAHAVSRGEVPAALPADEDFGFSGDAG 246
Query 195 SL--AYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFDLATAAHD----VLGIDAAGLL 248
L AY+ W R +A +G +L Y A H A D VLG
Sbjct 247 RLARAYESGWTACRLIAERWGEERLGAFYRAVG--AHRQREGAVEDAMDRVLGTTVEEFT 304
Query 249 ARWQRWL 255
ARW+ ++
Sbjct 305 ARWRDYV 311
>gi|302550848|ref|ZP_07303190.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468466|gb|EFL31559.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=394
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/243 (32%), Positives = 103/243 (43%), Gaps = 25/243 (10%)
Query 32 LSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQ 91
L LG + R L A D AV EV WGTDW + V+ S E A G AS
Sbjct 153 LVLGVGQSGRSLRDYAELADRAVPEVSRVWGTDWGRRLVVLVPKSLEGM-AGLLGSPASS 211
Query 92 WADIAAITVVDRVDPARRTVVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARADTALD 150
+ IAA+T + A R++ P A A + ++V HE H A R T
Sbjct 212 YRGIAAVTTGE--TGASAPSAADRVIVNPDAFALLGGLGEQVVATHETTHVATRRHTTAA 269
Query 151 APRWLAEGVADFVA--------RPKTPPPADAVS---VALSLPSDTDLDTPGPQRSL--A 197
P WL+EG AD+V R P + AV+ + LP D + G L A
Sbjct 270 TPLWLSEGYADWVGYRATGRTPREAAPELSRAVTRGRIPTGLPDDEEFAFTGDASRLARA 329
Query 198 YDRAWWFARFVAAAYGTAKLRELYLATCGVG-HFDLATAAHD----VLGIDAAGLLARWQ 252
Y+ W R +A +G ++L + Y A VG H A A D VLG+ + WQ
Sbjct 330 YESGWTACRLIADRWGESRLGDFYRA---VGEHQKRAGAVEDVMREVLGVTREEFIGLWQ 386
Query 253 RWL 255
+L
Sbjct 387 EYL 389
>gi|254382647|ref|ZP_04998005.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194341550|gb|EDX22516.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=229
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/216 (36%), Positives = 97/216 (45%), Gaps = 27/216 (12%)
Query 57 VVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVD----PARRTVV 112
V A W W+ + V+ G+ + AA G AS + + A+T RV PA R VV
Sbjct 18 VTAAWPQRWAGRVVVLVPGTLDAM-AALLGRPASDYRGLGAVTT-GRVGAGPAPADRVVV 75
Query 113 GQRIVFAPGAAHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKT---- 168
G A +S RIVL HE H A RA T+ P WL+EG AD+ A T
Sbjct 76 NPE-----GYAELSEEGRRIVLTHETTHVATRAATSPRTPLWLSEGFADWAAYRGTGRTA 130
Query 169 ----PPPADAV---SVALSLPSDTDLDTPGPQRSL--AYDRAWWFARFVAAAYGTAKLRE 219
P A AV + +LP+D G +L AY AW R +A +G A L
Sbjct 131 AEAAPELARAVRRGELPGALPADEAFGFGGDPEALARAYGGAWLACRLIADRWGEAALVR 190
Query 220 LYLATCGVGHFDLATAAHDVLGIDAAGLLARWQRWL 255
LY G LATA + L +D AGL WQ +L
Sbjct 191 LYQK---AGREPLATALPETLALDPAGLTRAWQTYL 223
>gi|297199115|ref|ZP_06916512.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715166|gb|EDY59200.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=397
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/223 (36%), Positives = 99/223 (45%), Gaps = 23/223 (10%)
Query 51 DAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRT 110
D AV V WGT+WS + V+ S E A G AS + IAA+T + PAR
Sbjct 175 DRAVPAVSDAWGTEWSRHVVVLVPRSLEGM-AELLGSPASSYRGIAAVTTGETGAPAR-- 231
Query 111 VVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADFVARPKT- 168
RI+ P A + ++VL HE H A RADT P WL+EG AD+V T
Sbjct 232 APADRIIVNPDAYGLLGTLGRQVVLTHETTHVATRADTTAATPLWLSEGYADWVGYRGTG 291
Query 169 -------PPPADAVS---VALSLPSDTDLDTPGPQRSLA--YDRAWWFARFVAAAYGTAK 216
P +AVS V +LPSD D G LA Y+ W R +A +G A+
Sbjct 292 RTPAEVAPELREAVSAGRVPTALPSDADFGFDGTASGLAVSYESGWMACRMIADRWGEAR 351
Query 217 LRELYLA----TCGVGHFDLATAAHDVLGIDAAGLLARWQRWL 255
L Y A T G + A A VL D A WQ +L
Sbjct 352 LGAFYRAVGTHTKRPGAVEEAMA--KVLDTDLKAFTAAWQEYL 392
>gi|302518581|ref|ZP_07270923.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302427476|gb|EFK99291.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=385
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/267 (33%), Positives = 117/267 (44%), Gaps = 31/267 (11%)
Query 5 PAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTD 64
P AP Q+ G A+R AD L LG L+ +A D AV V W
Sbjct 123 PGAPQQLWEQG-GMTAVRGADS-----LVLGVGQPRAKLADVAGLADDAVPAVRRVWPER 176
Query 65 WSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGA-A 123
W+ + V+ S ++ AA G + + IAA+T + A V R+ P A
Sbjct 177 WAGRLIVLLPASLDRM-AALLGEKPADYRGIAAVTTGELGSAAH--VPADRVTVNPEAYE 233
Query 124 HMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADF--------VARPKTPPPADAV 175
+ R VL HE H A R+ T P WL+EG AD+ R P A+AV
Sbjct 234 ELGAFGKRFVLIHEATHVATRSATTAATPLWLSEGFADWSGYHGSGRTPRQVAPELAEAV 293
Query 176 SVAL---SLPSDTDLDTPG-PQR-SLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHF 230
+LP+D D G P R + AY+ W R +A +G KLR+ Y A VG
Sbjct 294 REGEAPDTLPTDADFAFSGDPDRLARAYEGGWLACRMIAEQWGEPKLRDFYRA---VGEH 350
Query 231 D-----LATAAHDVLGIDAAGLLARWQ 252
+ +A AA VLG+D A L+ RW+
Sbjct 351 EGRDGAVAAAARKVLGVDEAELVGRWR 377
>gi|21220611|ref|NP_626390.1| hypothetical protein SCO2134 [Streptomyces coelicolor A3(2)]
gi|4539203|emb|CAB39861.1| hypothetical protein [Streptomyces coelicolor A3(2)]
Length=385
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/248 (33%), Positives = 104/248 (42%), Gaps = 25/248 (10%)
Query 27 RTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGG 86
R L LG + L R A D AV V W DWS + VV S E A G
Sbjct 139 RGTHSLVLGVGQSTTALRRFADLADRAVPAVSDAWDGDWSRRVVVVVPRSLEGM-AGLLG 197
Query 87 GLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARA 145
AS + IAA+T + R RI+ P A + ++VL HE H A RA
Sbjct 198 SPASSYRGIAAVTTGE--TGGREHAPADRIIVNPDAYGLLGSLGKQVVLTHETTHVATRA 255
Query 146 DTALDAPRWLAEGVADFV--------ARPKTPPPADAVSVALS---LPSDTDLDTPGPQR 194
DT P WL+EG AD+V A P A AV+ + LP+D D
Sbjct 256 DTTSATPLWLSEGYADWVGYRGSGRTAAQAAPELAGAVAEGRAPARLPTDEDFGFTADAE 315
Query 195 SL--AYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFD-----LATAAHDVLGIDAAGL 247
+L AY+ W R +A +G +L Y + VG D + A H+VLG
Sbjct 316 ALARAYEGGWLACRMIAEQWGEDRLDAFYRS---VGTHDDRAGAVEAALHEVLGTTPDDF 372
Query 248 LARWQRWL 255
ARW+ +L
Sbjct 373 TARWRSYL 380
>gi|289772141|ref|ZP_06531519.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289702340|gb|EFD69769.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=397
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/248 (33%), Positives = 104/248 (42%), Gaps = 25/248 (10%)
Query 27 RTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTDWSHDIFVVAAGSDEQFHAAAGG 86
R L LG + L R A D AV V W DWS + VV S E A G
Sbjct 151 RGTHSLVLGVGQSTTALRRFADLADRAVPAVSDAWDGDWSRRVVVVVPRSLEGM-AGLLG 209
Query 87 GLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGA-AHMSPAALRIVLGHELFHYAARA 145
AS + IAA+T + R RI+ P A + ++VL HE H A RA
Sbjct 210 SPASSYRGIAAVTTGE--TGGREHAPADRIIVNPDAYGLLGSLGKQVVLTHETTHVATRA 267
Query 146 DTALDAPRWLAEGVADFV--------ARPKTPPPADAVSVALS---LPSDTDLDTPGPQR 194
DT P WL+EG AD+V A P A AV+ + LP+D D
Sbjct 268 DTTSATPLWLSEGYADWVGYRGSGRTAAQAAPELAGAVAEGRAPARLPTDEDFGFTADAE 327
Query 195 SL--AYDRAWWFARFVAAAYGTAKLRELYLATCGVGHFD-----LATAAHDVLGIDAAGL 247
+L AY+ W R +A +G +L Y + VG D + A H+VLG
Sbjct 328 ALARAYEGGWLACRMIAEQWGEDRLDAFYRS---VGAHDDRAGAVEAALHEVLGTTPDDF 384
Query 248 LARWQRWL 255
ARW+ +L
Sbjct 385 TARWRSYL 392
>gi|318062810|ref|ZP_07981531.1| hypothetical protein SSA3_33068 [Streptomyces sp. SA3_actG]
Length=406
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/267 (32%), Positives = 116/267 (44%), Gaps = 31/267 (11%)
Query 5 PAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTD 64
P AP Q+ A+R AD L LG L+ +A D AV V W
Sbjct 144 PGAPQQLWEQGR-MTAVRGADS-----LVLGVGQPRAKLADVAGLADDAVPAVRRVWPER 197
Query 65 WSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGA-A 123
W+ + V+ S ++ AA G + + IAA+T + A V R+ P A
Sbjct 198 WAGRLIVLLPASLDRM-AALLGEKPADYRGIAAVTTGELGSAAH--VPADRVTVNPEAYE 254
Query 124 HMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADF--------VARPKTPPPADAV 175
+ R VL HE H A R+ T P WL+EG AD+ R P A+AV
Sbjct 255 ELGAFGKRFVLIHEATHVATRSATTAATPLWLSEGFADWSGYHGSGRTPRQVAPELAEAV 314
Query 176 SVAL---SLPSDTDLDTPG-PQR-SLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHF 230
+LP+D D G P R + AY+ W R +A +G KLR+ Y A VG
Sbjct 315 REGEAPDTLPTDADFAFSGDPGRLARAYEGGWLACRMIAEQWGEPKLRDFYRA---VGEH 371
Query 231 D-----LATAAHDVLGIDAAGLLARWQ 252
+ +A AA VLG+D A L+ RW+
Sbjct 372 EGRDGAVAAAARKVLGVDEAELVGRWR 398
>gi|318081828|ref|ZP_07989137.1| hypothetical protein SSA3_35170 [Streptomyces sp. SA3_actF]
Length=298
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/267 (32%), Positives = 116/267 (44%), Gaps = 31/267 (11%)
Query 5 PAAPAQVVAPADGFVALRVADDRTVRLLSLGGAATDRLLSRIAAGIDAAVDEVVAFWGTD 64
P AP Q+ A+R AD L LG L+ +A D AV V W
Sbjct 36 PGAPQQLWEQGR-MTAVRGADS-----LVLGVGQPRAKLADVAGLADDAVPAVRRVWPER 89
Query 65 WSHDIFVVAAGSDEQFHAAAGGGLASQWADIAAITVVDRVDPARRTVVGQRIVFAPGA-A 123
W+ + V+ S ++ AA G + + IAA+T + A V R+ P A
Sbjct 90 WAGRLIVLLPASLDRM-AALLGEKPADYRGIAAVTTGELGSAAH--VPADRVTVNPEAYE 146
Query 124 HMSPAALRIVLGHELFHYAARADTALDAPRWLAEGVADF--------VARPKTPPPADAV 175
+ R VL HE H A R+ T P WL+EG AD+ R P A+AV
Sbjct 147 ELGAFGKRFVLIHEATHVATRSATTAATPLWLSEGFADWSGYHGSGRTPRQVAPELAEAV 206
Query 176 SVAL---SLPSDTDLDTPG-PQR-SLAYDRAWWFARFVAAAYGTAKLRELYLATCGVGHF 230
+LP+D D G P R + AY+ W R +A +G KLR+ Y A VG
Sbjct 207 REGEAPDTLPTDADFAFSGDPGRLARAYEGGWLACRMIAEQWGEPKLRDFYRA---VGEH 263
Query 231 D-----LATAAHDVLGIDAAGLLARWQ 252
+ +A AA VLG+D A L+ RW+
Sbjct 264 EGRDGAVAAAARKVLGVDEAELVGRWR 290
Lambda K H
0.323 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 380985698940
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40