BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2194 Length=280 Score E Sequences producing significant alignments: (Bits) Value gi|15609331|ref|NP_216710.1| ubiquinol-cytochrome C reductase Qc... 565 2e-159 gi|289574880|ref|ZP_06455107.1| ubiquinol-cytochrome C reductase... 564 5e-159 gi|308232064|ref|ZP_07663991.1| ubiquinol-cytochrome C reductase... 560 1e-157 gi|167969413|ref|ZP_02551690.1| ubiquinol-cytochrome C reductase... 512 3e-143 gi|15827404|ref|NP_301667.1| cytochrome C reductase cytochrome C... 466 1e-129 gi|240168253|ref|ZP_04746912.1| ubiquinol-cytochrome C reductase... 459 2e-127 gi|183983229|ref|YP_001851520.1| ubiquinol-cytochrome C reductas... 440 1e-121 gi|296166062|ref|ZP_06848509.1| cytochrome c family protein [Myc... 440 1e-121 gi|342859904|ref|ZP_08716557.1| QcrC [Mycobacterium colombiense ... 439 2e-121 gi|41408031|ref|NP_960867.1| QcrC [Mycobacterium avium subsp. pa... 439 3e-121 gi|118462513|ref|YP_881502.1| cytochrome C [Mycobacterium avium ... 438 4e-121 gi|118618836|ref|YP_907168.1| ubiquinol-cytochrome C reductase Q... 438 4e-121 gi|254822834|ref|ZP_05227835.1| QcrC [Mycobacterium intracellula... 427 1e-117 gi|333990349|ref|YP_004522963.1| ubiquinol-cytochrome C reductas... 405 3e-111 gi|289754302|ref|ZP_06513680.1| LOW QUALITY PROTEIN: ubiquinol-c... 386 2e-105 gi|118472891|ref|YP_888538.1| ubiquinol-cytochrome C reductase c... 383 2e-104 gi|120404529|ref|YP_954358.1| class I cytochrome c [Mycobacteriu... 374 9e-102 gi|145223542|ref|YP_001134220.1| cytochrome c, class I [Mycobact... 372 2e-101 gi|226307083|ref|YP_002767043.1| menaquinol-cytochrome c reducta... 369 2e-100 gi|229490350|ref|ZP_04384191.1| cytochrome cc of cytochrome c re... 369 3e-100 gi|226360273|ref|YP_002778051.1| menaquinol-cytochrome c reducta... 368 4e-100 gi|54023695|ref|YP_117937.1| putative cytochrome c component [No... 367 1e-99 gi|111018144|ref|YP_701116.1| ubiquinol-cytochrome c reductase c... 363 2e-98 gi|108800258|ref|YP_640455.1| cytochrome c, class I [Mycobacteri... 359 3e-97 gi|169629055|ref|YP_001702704.1| ubiquinol-cytochrome c reductas... 357 8e-97 gi|38234201|ref|NP_939968.1| ubiquinol-cytochrome C reductase cy... 348 6e-94 gi|227488502|ref|ZP_03918818.1| ubiquinol-cytochrome C reductase... 345 3e-93 gi|312140187|ref|YP_004007523.1| ubiquinol-cytochrome c reductas... 345 6e-93 gi|25028640|ref|NP_738694.1| putative cytochrome c oxidase subun... 342 3e-92 gi|145296153|ref|YP_001138974.1| hypothetical protein cgR_2073 [... 342 4e-92 gi|300780806|ref|ZP_07090660.1| cytochrome c oxidase subunit I [... 342 4e-92 gi|344044861|gb|EGV40536.1| hypothetical protein CgS9114_08131 [... 340 1e-91 gi|62901034|sp|Q8NNK5.2|QCRC_CORGL RecName: Full=Menaquinol-cyto... 340 2e-91 gi|23308907|ref|NP_601395.2| cytochrome C [Corynebacterium gluta... 340 2e-91 gi|336325316|ref|YP_004605282.1| ubiquinol-cytochrome C reductas... 338 5e-91 gi|333918951|ref|YP_004492532.1| Menaquinol-cytochrome c reducta... 338 5e-91 gi|305681003|ref|ZP_07403810.1| menaquinol-cytochrome c reductas... 338 7e-91 gi|225021888|ref|ZP_03711080.1| hypothetical protein CORMATOL_01... 338 8e-91 gi|10336541|dbj|BAB13771.1| cytochrome cc1 subunit [Corynebacter... 337 1e-90 gi|29365473|dbj|BAC66446.1| cytochrome cc of cytochrome c reduct... 337 1e-90 gi|343924168|ref|ZP_08763731.1| menaquinol-cytochrome c reductas... 337 2e-90 gi|317506583|ref|ZP_07964375.1| cytochrome c [Segniliparus rugos... 335 6e-90 gi|296393480|ref|YP_003658364.1| cytochrome C class I [Segnilipa... 332 5e-89 gi|213965262|ref|ZP_03393459.1| ubiquinol-cytochrome C reductase... 330 2e-88 gi|337291149|ref|YP_004630170.1| ubiquinol-cytochrome C reductas... 330 2e-88 gi|306836520|ref|ZP_07469491.1| cytochrome c family protein [Cor... 330 2e-88 gi|227503251|ref|ZP_03933300.1| ubiquinol-cytochrome C reductase... 329 2e-88 gi|334563274|ref|ZP_08516265.1| ubiquinol-cytochrome C reductase... 328 5e-88 gi|296117510|ref|ZP_06836094.1| cytochrome c family protein [Cor... 327 1e-87 gi|300858842|ref|YP_003783825.1| ubiquinol-cytochrome C reductas... 324 9e-87 >gi|15609331|ref|NP_216710.1| ubiquinol-cytochrome C reductase QcrC(cytochrome C subunit) [Mycobacterium tuberculosis H37Rv] gi|15841685|ref|NP_336722.1| cytochrome c family protein [Mycobacterium tuberculosis CDC1551] gi|31793373|ref|NP_855866.1| ubiquinol-cytochrome C reductase QcrC (cytochrome C subunit) [Mycobacterium bovis AF2122/97] 42 more sequence titles Length=280 Score = 565 bits (1457), Expect = 2e-159, Method: Compositional matrix adjust. Identities = 279/280 (99%), Positives = 280/280 (100%), Gaps = 0/280 (0%) Query 1 LTKLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSA 60 +TKLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSA Sbjct 1 MTKLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSA 60 Query 61 LLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRK 120 LLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRK Sbjct 61 LLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRK 120 Query 121 DPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNF 180 DPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNF Sbjct 121 DPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNF 180 Query 181 TGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATE 240 TGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATE Sbjct 181 TGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATE 240 Query 241 ARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 ARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS Sbjct 241 ARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 >gi|289574880|ref|ZP_06455107.1| ubiquinol-cytochrome C reductase qcrC cytochrome C subunit [Mycobacterium tuberculosis K85] gi|339632222|ref|YP_004723864.1| ubiquinol-cytochrome C reductase [Mycobacterium africanum GM041182] gi|289539311|gb|EFD43889.1| ubiquinol-cytochrome C reductase qcrC cytochrome C subunit [Mycobacterium tuberculosis K85] gi|339331578|emb|CCC27275.1| putative ubiquinol-cytochrome C reductase QcrC (cytochrome C subunit) [Mycobacterium africanum GM041182] Length=280 Score = 564 bits (1453), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 278/280 (99%), Positives = 280/280 (100%), Gaps = 0/280 (0%) Query 1 LTKLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSA 60 +TKLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSA Sbjct 1 MTKLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSA 60 Query 61 LLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRK 120 LLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRK Sbjct 61 LLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRK 120 Query 121 DPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNF 180 DPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNF Sbjct 121 DPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNF 180 Query 181 TGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATE 240 TGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEA+KDIIAYVKVATE Sbjct 181 TGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAQKDIIAYVKVATE 240 Query 241 ARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 ARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS Sbjct 241 ARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 >gi|308232064|ref|ZP_07663991.1| ubiquinol-cytochrome C reductase qcrC cytochrome C subunit [Mycobacterium tuberculosis SUMu001] gi|308369652|ref|ZP_07666774.1| ubiquinol-cytochrome C reductase qcrC cytochrome C subunit [Mycobacterium tuberculosis SUMu002] gi|308370941|ref|ZP_07667055.1| ubiquinol-cytochrome C reductase qcrC cytochrome C subunit [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=277 Score = 560 bits (1442), Expect = 1e-157, Method: Compositional matrix adjust. Identities = 276/277 (99%), Positives = 277/277 (100%), Gaps = 0/277 (0%) Query 4 LGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLR 63 +GFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLR Sbjct 1 MGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLR 60 Query 64 TGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPI 123 TGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPI Sbjct 61 TGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPI 120 Query 124 FDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGK 183 FDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGK Sbjct 121 FDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGK 180 Query 184 GGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQ 243 GGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQ Sbjct 181 GGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQ 240 Query 244 PGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS Sbjct 241 PGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 277 >gi|167969413|ref|ZP_02551690.1| ubiquinol-cytochrome C reductase qcrC (cytochrome C subunit) [Mycobacterium tuberculosis H37Ra] gi|253798741|ref|YP_003031742.1| ubiquinol-cytochrome C reductase qcrC cytochrome C subunit [Mycobacterium tuberculosis KZN 1435] gi|254551234|ref|ZP_05141681.1| putative ubiquinol-cytochrome c reductase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 11 more sequence titles Length=252 Score = 512 bits (1318), Expect = 3e-143, Method: Compositional matrix adjust. Identities = 251/252 (99%), Positives = 252/252 (100%), Gaps = 0/252 (0%) Query 29 VLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHG 88 +LLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHG Sbjct 1 MLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHG 60 Query 89 PSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRN 148 PSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRN Sbjct 61 PSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRN 120 Query 149 PDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAM 208 PDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAM Sbjct 121 PDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAM 180 Query 209 LTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVA 268 LTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVA Sbjct 181 LTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVA 240 Query 269 AIGLALWIGARS 280 AIGLALWIGARS Sbjct 241 AIGLALWIGARS 252 >gi|15827404|ref|NP_301667.1| cytochrome C reductase cytochrome C component [Mycobacterium leprae TN] gi|221229881|ref|YP_002503297.1| putative cytochrome C reductase cytochrome C component [Mycobacterium leprae Br4923] gi|13432222|sp|O69583.2|QCRC_MYCLE RecName: Full=Ubiquinol-cytochrome c reductase cytochrome c subunit gi|13092954|emb|CAC31262.1| putative cytochrome C reductase cytochrome C component [Mycobacterium leprae] gi|219932988|emb|CAR70976.1| putative cytochrome C reductase cytochrome C component [Mycobacterium leprae Br4923] Length=289 Score = 466 bits (1200), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 241/289 (84%), Positives = 255/289 (89%), Gaps = 9/289 (3%) Query 1 LTKLGFTRSGGSKSGRTRRR---------LRRRLSGGVLLLIALTIAGGLAAVLTPTPQV 51 + KLGFTRS S R LRRRLS G+LLL+ALT++GGLAAVLTPTPQV Sbjct 1 MKKLGFTRSSRRCSQPQEREQESERSRRRLRRRLSEGLLLLVALTVSGGLAAVLTPTPQV 60 Query 52 AVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAM 111 AVADE SSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAM Sbjct 61 AVADEDSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAM 120 Query 112 RGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFR 171 RGEAQ RKDPIF+E+QIDAIGAY+QANGGGPTV RNPDGS+A QSLRG DLGRGGDLFR Sbjct 121 RGEAQVARKDPIFNESQIDAIGAYIQANGGGPTVARNPDGSVAMQSLRGTDLGRGGDLFR 180 Query 172 LNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDI 231 LNCASCHNFTGKGGALSSGKYAPDL PANEQQILTAMLTGPQNMPKF++RQLSFEAKKDI Sbjct 181 LNCASCHNFTGKGGALSSGKYAPDLGPANEQQILTAMLTGPQNMPKFADRQLSFEAKKDI 240 Query 232 IAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 I YV+ E RQPGGY LGGFGPAPEGMA+WIIGMV AIGLALWIGAR+ Sbjct 241 IGYVRTVIEERQPGGYSLGGFGPAPEGMAIWIIGMVTAIGLALWIGARA 289 >gi|240168253|ref|ZP_04746912.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium kansasii ATCC 12478] Length=282 Score = 459 bits (1181), Expect = 2e-127, Method: Compositional matrix adjust. Identities = 256/282 (91%), Positives = 268/282 (96%), Gaps = 2/282 (0%) Query 1 LTKLGFTRSGGS--KSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESS 58 + KLGFTRSGGS ++ R+RRRL RRLSGG+LLLIALT+AGGLAAVLTPTPQVAVADESS Sbjct 1 MKKLGFTRSGGSAQRNSRSRRRLHRRLSGGLLLLIALTVAGGLAAVLTPTPQVAVADESS 60 Query 59 SALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAP 118 SALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQA Sbjct 61 SALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAQ 120 Query 119 RKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCH 178 RK+PIFDEAQIDA+GAYVQANGGGPTVVRNPDGSIAT+SLRG+DLGRGGDLFRLNCASCH Sbjct 121 RKEPIFDEAQIDALGAYVQANGGGPTVVRNPDGSIATKSLRGDDLGRGGDLFRLNCASCH 180 Query 179 NFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVA 238 NFTGKGGALSSGKYAPDL PANEQQILTAMLTGPQNMPKF +RQLSFEAKKDIIAYV+ Sbjct 181 NFTGKGGALSSGKYAPDLGPANEQQILTAMLTGPQNMPKFDDRQLSFEAKKDIIAYVRTV 240 Query 239 TEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 E R PGGY LGGFGPAPEGMAMWIIGMVAAIGLALWIGARS Sbjct 241 AEERSPGGYGLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 282 >gi|183983229|ref|YP_001851520.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium marinum M] gi|183176555|gb|ACC41665.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium marinum M] Length=301 Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 234/301 (78%), Positives = 250/301 (84%), Gaps = 21/301 (6%) Query 1 LTKLGFTRSGGSK----------SGRTRRRLRRRLSGGVLLLIALTIA-----------G 39 + KLGFTRSGGS+ G R +R S L G Sbjct 1 MKKLGFTRSGGSEPVARRLVGALRGPRSHRSEQRTSRARRRLHRRLSGGLLLLIALTIAG 60 Query 40 GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAV 99 G+AAVLTP PQVAVADESS+ALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAV Sbjct 61 GVAAVLTPAPQVAVADESSAALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAV 120 Query 100 YFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLR 159 YFQVSTGRMPAMRGEAQA RK+PIFDEAQ DA+GA+VQANGGGPTVVRNPDGS+A +SLR Sbjct 121 YFQVSTGRMPAMRGEAQAQRKEPIFDEAQTDALGAFVQANGGGPTVVRNPDGSLAMKSLR 180 Query 160 GNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFS 219 G+DLGRGGDLFRLNC SCHNFTGKGGALSSGK+APDL PANEQQILTAMLTGPQNMPKFS Sbjct 181 GDDLGRGGDLFRLNCTSCHNFTGKGGALSSGKFAPDLGPANEQQILTAMLTGPQNMPKFS 240 Query 220 NRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGAR 279 +RQLSF+AKKDIIAYV+ A E RQPGGY LGGFGPAPEGMA+WIIGMVAAIGLALWIGAR Sbjct 241 DRQLSFDAKKDIIAYVRNAAEERQPGGYGLGGFGPAPEGMAIWIIGMVAAIGLALWIGAR 300 Query 280 S 280 S Sbjct 301 S 301 >gi|296166062|ref|ZP_06848509.1| cytochrome c family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898583|gb|EFG78142.1| cytochrome c family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=283 Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 222/248 (90%), Positives = 232/248 (94%), Gaps = 0/248 (0%) Query 33 IALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLI 92 IALTIAGGLAAVLTP PQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV D GPSLI Sbjct 35 IALTIAGGLAAVLTPRPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVADRGPSLI 94 Query 93 GVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGS 152 GVGE AVYFQVSTGRMPAM GEAQAPRK+PIFDEAQ+DA+GAYVQANGGGPT VRNPDGS Sbjct 95 GVGEEAVYFQVSTGRMPAMTGEAQAPRKEPIFDEAQVDALGAYVQANGGGPTTVRNPDGS 154 Query 153 IATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGP 212 +A +SLRG+DLGRGGDLFRLNC+SCHNFTGKGGALSSGKYAP+L PANEQQIL AM TGP Sbjct 155 LAMKSLRGDDLGRGGDLFRLNCSSCHNFTGKGGALSSGKYAPNLEPANEQQILAAMRTGP 214 Query 213 QNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGL 272 QNMPKFS+RQLSFEAKKDII Y+K TE RQPGGY LGGFGPAPEGMA WIIGMVAAIGL Sbjct 215 QNMPKFSDRQLSFEAKKDIIGYIKAVTEERQPGGYGLGGFGPAPEGMAAWIIGMVAAIGL 274 Query 273 ALWIGARS 280 ALWIGARS Sbjct 275 ALWIGARS 282 >gi|342859904|ref|ZP_08716557.1| QcrC [Mycobacterium colombiense CECT 3035] gi|342133036|gb|EGT86256.1| QcrC [Mycobacterium colombiense CECT 3035] Length=285 Score = 439 bits (1130), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 240/285 (85%), Positives = 257/285 (91%), Gaps = 5/285 (1%) Query 1 LTKLGFTRSGGSKSGRTRR-----RLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVAD 55 + KLG TRSG +K + +R RLRRRLSGG+LLLIALTIAGGLAA+LTP PQVAVAD Sbjct 1 MKKLGSTRSGAAKPPQGQRDRSRRRLRRRLSGGLLLLIALTIAGGLAAILTPRPQVAVAD 60 Query 56 ESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEA 115 ES+SALLRTGKQLFDTSCVSCHGANLQGVPD GPSLIGVGE AVYFQVSTGRMPAM GEA Sbjct 61 ESNSALLRTGKQLFDTSCVSCHGANLQGVPDRGPSLIGVGEEAVYFQVSTGRMPAMTGEA 120 Query 116 QAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCA 175 QAPRK+PIFDE Q+DA+GAYVQANGGGPT VRNPDGS+A +SLRG DLGRGGDLFRLNC+ Sbjct 121 QAPRKEPIFDEGQVDALGAYVQANGGGPTTVRNPDGSLAMRSLRGEDLGRGGDLFRLNCS 180 Query 176 SCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYV 235 SCHNFTGKGGALSSGK+APDL PANEQQIL AM TGPQNMPKFS+RQLSFEAKKDII Y+ Sbjct 181 SCHNFTGKGGALSSGKFAPDLEPANEQQILAAMRTGPQNMPKFSDRQLSFEAKKDIIGYI 240 Query 236 KVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 K TE RQPGGY LGGFGPAPEGMA WIIGMVAAIGLALWIGAR+ Sbjct 241 KAVTEERQPGGYGLGGFGPAPEGMAAWIIGMVAAIGLALWIGARA 285 >gi|41408031|ref|NP_960867.1| QcrC [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396386|gb|AAS04250.1| QcrC [Mycobacterium avium subsp. paratuberculosis K-10] Length=286 Score = 439 bits (1128), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 220/248 (89%), Positives = 231/248 (94%), Gaps = 0/248 (0%) Query 33 IALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLI 92 IALTIAGGLAA+LTP PQVAVADES+SALLRTGKQLFDTSCVSCHGANLQGVPD GPSLI Sbjct 39 IALTIAGGLAAILTPRPQVAVADESNSALLRTGKQLFDTSCVSCHGANLQGVPDRGPSLI 98 Query 93 GVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGS 152 GVGE AVYFQVSTGRMPAM GEAQAPRK+P+FDEAQ DA+GAYVQANGGGPT VRNPDGS Sbjct 99 GVGEEAVYFQVSTGRMPAMTGEAQAPRKEPVFDEAQTDALGAYVQANGGGPTTVRNPDGS 158 Query 153 IATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGP 212 +A +SLRG DLGRGGDLFRLNC+SCHNFTGKGGALSSGKYAPDL PANEQQIL AM TGP Sbjct 159 LAMRSLRGEDLGRGGDLFRLNCSSCHNFTGKGGALSSGKYAPDLEPANEQQILAAMRTGP 218 Query 213 QNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGL 272 QNMPKFS+RQLSFEAKKDII Y+K TE RQPGGY LGGFGPAPEGMA WIIGMVAAIGL Sbjct 219 QNMPKFSDRQLSFEAKKDIIGYIKAVTEERQPGGYGLGGFGPAPEGMAAWIIGMVAAIGL 278 Query 273 ALWIGARS 280 ALWIGAR+ Sbjct 279 ALWIGARA 286 >gi|118462513|ref|YP_881502.1| cytochrome C [Mycobacterium avium 104] gi|254774971|ref|ZP_05216487.1| cytochrome c family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118163800|gb|ABK64697.1| cytochrome c family protein [Mycobacterium avium 104] gi|336461917|gb|EGO40770.1| cytochrome c, mono- and diheme variants family [Mycobacterium avium subsp. paratuberculosis S397] Length=275 Score = 438 bits (1127), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 220/248 (89%), Positives = 231/248 (94%), Gaps = 0/248 (0%) Query 33 IALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLI 92 IALTIAGGLAA+LTP PQVAVADES+SALLRTGKQLFDTSCVSCHGANLQGVPD GPSLI Sbjct 28 IALTIAGGLAAILTPRPQVAVADESNSALLRTGKQLFDTSCVSCHGANLQGVPDRGPSLI 87 Query 93 GVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGS 152 GVGE AVYFQVSTGRMPAM GEAQAPRK+P+FDEAQ DA+GAYVQANGGGPT VRNPDGS Sbjct 88 GVGEEAVYFQVSTGRMPAMTGEAQAPRKEPVFDEAQTDALGAYVQANGGGPTTVRNPDGS 147 Query 153 IATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGP 212 +A +SLRG DLGRGGDLFRLNC+SCHNFTGKGGALSSGKYAPDL PANEQQIL AM TGP Sbjct 148 LAMRSLRGEDLGRGGDLFRLNCSSCHNFTGKGGALSSGKYAPDLEPANEQQILAAMRTGP 207 Query 213 QNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGL 272 QNMPKFS+RQLSFEAKKDII Y+K TE RQPGGY LGGFGPAPEGMA WIIGMVAAIGL Sbjct 208 QNMPKFSDRQLSFEAKKDIIGYIKAVTEERQPGGYGLGGFGPAPEGMAAWIIGMVAAIGL 267 Query 273 ALWIGARS 280 ALWIGAR+ Sbjct 268 ALWIGARA 275 >gi|118618836|ref|YP_907168.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium ulcerans Agy99] gi|118570946|gb|ABL05697.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium ulcerans Agy99] Length=301 Score = 438 bits (1127), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 233/301 (78%), Positives = 249/301 (83%), Gaps = 21/301 (6%) Query 1 LTKLGFTRSGGSK----------SGRTRRRLRRRLSGGVLLLIALTIA-----------G 39 + KLGFTRSGGS+ G R +R S L G Sbjct 1 MKKLGFTRSGGSEPVARRLVGALRGPRSHRSEQRTSRARRRLHRRLSGGLLLLIALTIAG 60 Query 40 GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAV 99 G+AAVLTP PQVAVADESS+ALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAV Sbjct 61 GVAAVLTPAPQVAVADESSAALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAV 120 Query 100 YFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLR 159 YFQVSTGRMPAMRGEAQA RK+PIFDEAQ DA+GA+VQANGGGPTVVRNPDGS+A +SLR Sbjct 121 YFQVSTGRMPAMRGEAQAQRKEPIFDEAQTDALGAFVQANGGGPTVVRNPDGSLAMKSLR 180 Query 160 GNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFS 219 G+DLGRGGDLFRLNC SCHNFTGKGGALSSGK+APDL PANEQQILTAMLTGPQNMPKFS Sbjct 181 GDDLGRGGDLFRLNCTSCHNFTGKGGALSSGKFAPDLGPANEQQILTAMLTGPQNMPKFS 240 Query 220 NRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGAR 279 +RQLSF+AKKDIIAYV+ A E RQPGGY LGGFGPAPEGMA+WIIGMVAA GLALWIGAR Sbjct 241 DRQLSFDAKKDIIAYVRNAAEERQPGGYGLGGFGPAPEGMAIWIIGMVAATGLALWIGAR 300 Query 280 S 280 S Sbjct 301 S 301 >gi|254822834|ref|ZP_05227835.1| QcrC [Mycobacterium intracellulare ATCC 13950] Length=256 Score = 427 bits (1098), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 215/242 (89%), Positives = 224/242 (93%), Gaps = 0/242 (0%) Query 39 GGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAA 98 GG+AAVLTP PQVAVADES+SALLRTGKQLFDTSCVSCHGANLQGVPD GPSLIGVGE A Sbjct 15 GGVAAVLTPRPQVAVADESNSALLRTGKQLFDTSCVSCHGANLQGVPDRGPSLIGVGEEA 74 Query 99 VYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSL 158 VYFQVSTGRMPAM GEAQAPRK+PIFDE QIDA+GAYVQANGGGPT VRNPDGS+A SL Sbjct 75 VYFQVSTGRMPAMTGEAQAPRKEPIFDEGQIDALGAYVQANGGGPTTVRNPDGSLAMHSL 134 Query 159 RGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKF 218 RG DLGRGGDLFRLNC+SCHNFTGKGGALSSGKYAPDL PANEQQIL AM TGPQNMPKF Sbjct 135 RGEDLGRGGDLFRLNCSSCHNFTGKGGALSSGKYAPDLEPANEQQILAAMRTGPQNMPKF 194 Query 219 SNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGA 278 S+RQLSFEAKKDII Y+K TE RQPGGY LGGFGPAPEGMA WIIGMVAAIGLALWIGA Sbjct 195 SDRQLSFEAKKDIIGYIKAVTEERQPGGYGLGGFGPAPEGMAAWIIGMVAAIGLALWIGA 254 Query 279 RS 280 R+ Sbjct 255 RA 256 >gi|333990349|ref|YP_004522963.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium sp. JDM601] gi|333486317|gb|AEF35709.1| ubiquinol-cytochrome C reductase QcrC [Mycobacterium sp. JDM601] Length=280 Score = 405 bits (1042), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 204/237 (87%), Positives = 218/237 (92%), Gaps = 0/237 (0%) Query 44 VLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQV 103 V+TPTPQVAVADES+SALLRTGKQLFDTSCVSCHGANLQG P GPSLIGVGEAAVYFQV Sbjct 44 VVTPTPQVAVADESASALLRTGKQLFDTSCVSCHGANLQGEPGRGPSLIGVGEAAVYFQV 103 Query 104 STGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGNDL 163 STGRMPA RGEAQAPRK P+FD+ QIDA+GAYVQANGGGPTVVR+ DGSIA SLRG+DL Sbjct 104 STGRMPAARGEAQAPRKYPLFDDNQIDALGAYVQANGGGPTVVRDADGSIAQASLRGDDL 163 Query 164 GRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQL 223 GRGGDLFRLNCASCHNFTG+GGALSSGKYAPDLAPANEQQILTAM+TGPQNMP+FS+RQ+ Sbjct 164 GRGGDLFRLNCASCHNFTGRGGALSSGKYAPDLAPANEQQILTAMVTGPQNMPRFSDRQI 223 Query 224 SFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 S E KKDIIAYV+ TE PGGY LGGFGPAPEGM MWI+GMVAAIG ALWIGARS Sbjct 224 SMEEKKDIIAYVRAVTEEHDPGGYGLGGFGPAPEGMVMWIVGMVAAIGAALWIGARS 280 >gi|289754302|ref|ZP_06513680.1| LOW QUALITY PROTEIN: ubiquinol-cytochrome C reductase QcrC(cytochrome C subunit) [Mycobacterium tuberculosis EAS054] gi|289694889|gb|EFD62318.1| LOW QUALITY PROTEIN: ubiquinol-cytochrome C reductase QcrC(cytochrome C subunit) [Mycobacterium tuberculosis EAS054] Length=189 Score = 386 bits (992), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 93 GVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGS 152 GVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGS Sbjct 2 GVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGS 61 Query 153 IATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGP 212 IATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGP Sbjct 62 IATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGP 121 Query 213 QNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGL 272 QNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGL Sbjct 122 QNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGL 181 Query 273 ALWIGARS 280 ALWIGARS Sbjct 182 ALWIGARS 189 >gi|118472891|ref|YP_888538.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Mycobacterium smegmatis str. MC2 155] gi|118174178|gb|ABK75074.1| ubiquinol-cytochrome c reductase cytochrome c subunit [Mycobacterium smegmatis str. MC2 155] Length=268 Score = 383 bits (983), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 194/244 (80%), Positives = 215/244 (89%), Gaps = 0/244 (0%) Query 37 IAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGE 96 +AGG+AA LTP PQVAVADES SALLRTGKQLF+TSCVSCHGANLQGVPD GPSLIG GE Sbjct 25 VAGGVAATLTPQPQVAVADESQSALLRTGKQLFETSCVSCHGANLQGVPDRGPSLIGTGE 84 Query 97 AAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQ 156 AAVYFQVSTGRMPAMRGEAQAP K P FDE+QIDA+GAYVQANGGGPTV R+ G++A + Sbjct 85 AAVYFQVSTGRMPAMRGEAQAPSKPPHFDESQIDALGAYVQANGGGPTVPRDDHGAVAQE 144 Query 157 SLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMP 216 SL G D+ RGGDLFRLNCASCHNFTGKGGALSSGKYAPDL AN QI TAMLTGPQNMP Sbjct 145 SLIGGDVARGGDLFRLNCASCHNFTGKGGALSSGKYAPDLGDANPAQIYTAMLTGPQNMP 204 Query 217 KFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWI 276 KFS+RQL+ + K+DI+AYV+ + E GGY LGGFGPAPEGMAMWIIGMVAAIG+A+WI Sbjct 205 KFSDRQLTPDEKRDIVAYVRESAETPSYGGYGLGGFGPAPEGMAMWIIGMVAAIGVAMWI 264 Query 277 GARS 280 G+R+ Sbjct 265 GSRA 268 >gi|120404529|ref|YP_954358.1| class I cytochrome c [Mycobacterium vanbaalenii PYR-1] gi|119957347|gb|ABM14352.1| menaquinol-cytochrome c reductase cytochrome c1 subunit precursor [Mycobacterium vanbaalenii PYR-1] Length=273 Score = 374 bits (960), Expect = 9e-102, Method: Compositional matrix adjust. Identities = 199/270 (74%), Positives = 225/270 (84%), Gaps = 0/270 (0%) Query 11 GSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFD 70 GS + ++RRRLRRR++ +LLL L +AGGLAA LTP+PQVAVADES+SALLRTG+QL++ Sbjct 4 GSMTSKSRRRLRRRVTAALLLLSGLVMAGGLAATLTPSPQVAVADESASALLRTGQQLYE 63 Query 71 TSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQID 130 TSCVSCHG NLQGV D GPSLIGVGEAAVYFQVS+GRMPAMR EAQ RKDP+FDEAQ D Sbjct 64 TSCVSCHGVNLQGVADRGPSLIGVGEAAVYFQVSSGRMPAMRNEAQIERKDPVFDEAQTD 123 Query 131 AIGAYVQANGGGPTVVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSG 190 A+GAY+QANGGGP V R+ +G +A QSL GND+ RGGDLFRLNCASCHNFTGKGGALSSG Sbjct 124 ALGAYIQANGGGPVVPRDENGHVAEQSLIGNDVARGGDLFRLNCASCHNFTGKGGALSSG 183 Query 191 KYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLG 250 KYAPDL A QI TAM+TGPQNMPKFS RQLS E K+DI+AYV+ A E PGG LG Sbjct 184 KYAPDLGVATPAQIYTAMVTGPQNMPKFSERQLSPEEKRDIVAYVREAAETPTPGGLGLG 243 Query 251 GFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 GFGP EGM WI+GMVA I ALWIGAR+ Sbjct 244 GFGPTSEGMVAWIVGMVAIIAAALWIGARA 273 >gi|145223542|ref|YP_001134220.1| cytochrome c, class I [Mycobacterium gilvum PYR-GCK] gi|315443888|ref|YP_004076767.1| cytochrome C, mono- and diheme variants family [Mycobacterium sp. Spyr1] gi|145216028|gb|ABP45432.1| menaquinol-cytochrome c reductase cytochrome c1 subunit precursor [Mycobacterium gilvum PYR-GCK] gi|315262191|gb|ADT98932.1| cytochrome c, mono- and diheme variants family [Mycobacterium sp. Spyr1] Length=278 Score = 372 bits (956), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 192/246 (79%), Positives = 210/246 (86%), Gaps = 0/246 (0%) Query 35 LTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 94 L +AGGLAA LTP PQVAVADES+SA+LRTG+QL+DTSCVSCHG NLQGV D GPSLIGV Sbjct 33 LVMAGGLAATLTPQPQVAVADESASAMLRTGQQLYDTSCVSCHGVNLQGVADRGPSLIGV 92 Query 95 GEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIA 154 GEAAVYFQVSTGRMPAMRGEAQAP+K FDEAQ DA+GAY+QANGGGP V R+ +G IA Sbjct 93 GEAAVYFQVSTGRMPAMRGEAQAPQKPRQFDEAQTDALGAYIQANGGGPVVPRDENGEIA 152 Query 155 TQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQN 214 +QSL GND+ RGGDLFRLNCASCHNFTGKGGALSSGKYAPDL ANE QI TAMLTGPQN Sbjct 153 SQSLIGNDVARGGDLFRLNCASCHNFTGKGGALSSGKYAPDLGTANEAQIYTAMLTGPQN 212 Query 215 MPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLAL 274 MPKFS+RQLS E K+DI+AYV+ A E PGG LGGFGP EGM WI+GMVA I AL Sbjct 213 MPKFSDRQLSPEEKRDIVAYVREAAETPTPGGLGLGGFGPTSEGMVAWIVGMVAIIAAAL 272 Query 275 WIGARS 280 WIGAR+ Sbjct 273 WIGARA 278 >gi|226307083|ref|YP_002767043.1| menaquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus erythropolis PR4] gi|226186200|dbj|BAH34304.1| menaquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus erythropolis PR4] Length=283 Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 180/256 (71%), Positives = 216/256 (85%), Gaps = 0/256 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 ++G ++L++ L AG LA+ LTP PQVA A + S+AL+R GKQL+DTSC++CHGANLQGV Sbjct 28 VTGALVLMMGLISAGFLASALTPAPQVATASDDSAALIREGKQLYDTSCITCHGANLQGV 87 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 D GPSLIGVGEAAVYFQVS+GRMPA R EAQA RKDP FD AQ DA+GA++QANGGGPT Sbjct 88 QDRGPSLIGVGEAAVYFQVSSGRMPAARNEAQAARKDPKFDAAQTDALGAFIQANGGGPT 147 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 ++R+ +G IA SLRG D+GRG +LFRLNCASCHNFTG+GGALSSGKYAP L PA+EQQI Sbjct 148 LIRDENGEIAQSSLRGGDIGRGSELFRLNCASCHNFTGRGGALSSGKYAPVLDPASEQQI 207 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 AM+TGPQNMPKFS+RQL+ E KKDIIAYVK + E++ PGGY LGG GPA EG+AMW + Sbjct 208 YAAMVTGPQNMPKFSDRQLTIEEKKDIIAYVKSSGESKDPGGYGLGGLGPASEGLAMWAV 267 Query 265 GMVAAIGLALWIGARS 280 G++A +G ALWIGARS Sbjct 268 GIIAVVGAALWIGARS 283 >gi|229490350|ref|ZP_04384191.1| cytochrome cc of cytochrome c reductase complex [Rhodococcus erythropolis SK121] gi|229322640|gb|EEN88420.1| cytochrome cc of cytochrome c reductase complex [Rhodococcus erythropolis SK121] Length=283 Score = 369 bits (947), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 180/256 (71%), Positives = 216/256 (85%), Gaps = 0/256 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 ++G ++L++ L AG LA+ LTP PQVA A + S+AL+R GKQL+DTSC++CHGANLQGV Sbjct 28 VTGALVLMMGLISAGFLASALTPAPQVATASDDSAALIREGKQLYDTSCITCHGANLQGV 87 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 D GPSLIGVGEAAVYFQVS+GRMPA R EAQA RKDP FD AQ DA+GA++QANGGGPT Sbjct 88 QDRGPSLIGVGEAAVYFQVSSGRMPAARNEAQAARKDPKFDAAQTDALGAFIQANGGGPT 147 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 ++R+ +G IA SLRG D+GRG +LFRLNCASCHNFTG+GGALSSGKYAP L PA+EQQI Sbjct 148 LIRDENGEIAQSSLRGGDVGRGSELFRLNCASCHNFTGRGGALSSGKYAPVLDPASEQQI 207 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 AM+TGPQNMPKFS+RQL+ E KKDIIAYVK + E++ PGGY LGG GPA EG+AMW + Sbjct 208 YAAMVTGPQNMPKFSDRQLTIEEKKDIIAYVKSSGESKDPGGYGLGGLGPASEGLAMWAV 267 Query 265 GMVAAIGLALWIGARS 280 G++A +G ALWIGARS Sbjct 268 GIIAVVGAALWIGARS 283 >gi|226360273|ref|YP_002778051.1| menaquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus opacus B4] gi|226238758|dbj|BAH49106.1| menaquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus opacus B4] Length=283 Score = 368 bits (945), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 181/256 (71%), Positives = 214/256 (84%), Gaps = 0/256 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 ++G ++L++ L AG LA+ LTPTPQVA A + +AL+R G+QL+DTSC++CHGANLQGV Sbjct 28 VTGALVLMMGLVSAGFLASALTPTPQVATATDDQAALIREGQQLYDTSCITCHGANLQGV 87 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 D GPSLIGVGEAAVYFQVS+GRMPA R EAQ RK FD Q DAIGAYVQANGGGPT Sbjct 88 QDRGPSLIGVGEAAVYFQVSSGRMPASRNEAQVERKPVKFDAEQTDAIGAYVQANGGGPT 147 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 V+R+ +G IA SLRG D+GRG +LFRLNCASCHNFTG+GGALSSGKYAP L PA+EQQI Sbjct 148 VIRDENGEIAQSSLRGGDIGRGSELFRLNCASCHNFTGRGGALSSGKYAPVLDPASEQQI 207 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 TAM+TGPQNMPKFS+RQL+ E KKDIIAY+K + E +QPGGY LGG GPA EG+AMW+I Sbjct 208 YTAMVTGPQNMPKFSDRQLTLEEKKDIIAYIKSSGETKQPGGYGLGGIGPASEGLAMWVI 267 Query 265 GMVAAIGLALWIGARS 280 G++A +G ALWIGARS Sbjct 268 GIIAVVGAALWIGARS 283 >gi|54023695|ref|YP_117937.1| putative cytochrome c component [Nocardia farcinica IFM 10152] gi|54015203|dbj|BAD56573.1| putative cytochrome c component [Nocardia farcinica IFM 10152] Length=287 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 181/256 (71%), Positives = 217/256 (85%), Gaps = 0/256 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 ++GG+ LL+ L AG LA LTP PQVA A++ SAL+R GKQL++TSC++CHGANLQGV Sbjct 32 VAGGLALLVGLVGAGFLATALTPEPQVATANQDQSALIREGKQLYETSCITCHGANLQGV 91 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 PD GPSLIGVGEAAVYFQVS+GRMP +AQA RK P FD QIDA+GAY+ ANGGGPT Sbjct 92 PDRGPSLIGVGEAAVYFQVSSGRMPLAANQAQATRKPPKFDAQQIDALGAYIAANGGGPT 151 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 VVRNPDGSIA +SLRG+D+GRG +LFR+NCASCHNFTG+GGALSSGKYAP L PA+EQQI Sbjct 152 VVRNPDGSIAQESLRGDDIGRGSELFRMNCASCHNFTGRGGALSSGKYAPPLDPASEQQI 211 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 TAMLTGP+NMPKFS+RQL+ E K+DIIAY+K A E + PGGY LGGFGPA EG+A+W++ Sbjct 212 YTAMLTGPENMPKFSDRQLTPEEKRDIIAYIKNAAEEKTPGGYGLGGFGPATEGLAIWVV 271 Query 265 GMVAAIGLALWIGARS 280 G+V +G A+WIG+RS Sbjct 272 GIVLTVGAAMWIGSRS 287 >gi|111018144|ref|YP_701116.1| ubiquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus jostii RHA1] gi|110817674|gb|ABG92958.1| probable ubiquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus jostii RHA1] Length=249 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 179/249 (72%), Positives = 208/249 (84%), Gaps = 0/249 (0%) Query 32 LIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSL 91 ++ L AG LA+ LTPTPQVA A + +AL+R GKQL+DTSC++CHGANLQGV D GPSL Sbjct 1 MMGLVSAGFLASALTPTPQVATATDDQAALIREGKQLYDTSCITCHGANLQGVQDRGPSL 60 Query 92 IGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDG 151 IGVGEAAVYFQVS+GRMPA R EAQ RK FD Q DAIGAYVQANGGGPTV+R+ +G Sbjct 61 IGVGEAAVYFQVSSGRMPASRNEAQVERKPVKFDAEQTDAIGAYVQANGGGPTVIRDENG 120 Query 152 SIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTG 211 +A SLRG D+GRG +LFRLNCASCHNFTG+GGALSSGKYAP L PA+EQQI TAM+TG Sbjct 121 EVAQSSLRGGDIGRGSELFRLNCASCHNFTGRGGALSSGKYAPVLDPASEQQIYTAMVTG 180 Query 212 PQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIG 271 PQNMPKFS+RQL+ E KKDIIAY+K + E +QPGGY LGG GPA EG+AMW+IG++A +G Sbjct 181 PQNMPKFSDRQLTLEEKKDIIAYIKSSGETKQPGGYGLGGIGPASEGLAMWVIGIIAVVG 240 Query 272 LALWIGARS 280 ALWIGARS Sbjct 241 AALWIGARS 249 >gi|108800258|ref|YP_640455.1| cytochrome c, class I [Mycobacterium sp. MCS] gi|119869386|ref|YP_939338.1| cytochrome c, class I [Mycobacterium sp. KMS] gi|126435881|ref|YP_001071572.1| cytochrome c, class I [Mycobacterium sp. JLS] gi|108770677|gb|ABG09399.1| menaquinol-cytochrome c reductase cytochrome c1 subunit precursor [Mycobacterium sp. MCS] gi|119695475|gb|ABL92548.1| menaquinol-cytochrome c reductase cytochrome c1 subunit precursor [Mycobacterium sp. KMS] gi|126235681|gb|ABN99081.1| menaquinol-cytochrome c reductase cytochrome c1 subunit precursor [Mycobacterium sp. JLS] Length=272 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 190/256 (75%), Positives = 213/256 (84%), Gaps = 1/256 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 LS VLLL+ L +AGG+AA LTP PQVAVADES SALLRTGK+L+D SCVSCHG+NLQGV Sbjct 18 LSAAVLLLVGLGVAGGVAATLTPAPQVAVADESQSALLRTGKELYDMSCVSCHGSNLQGV 77 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 D GPSLIGVGEAAVYFQVSTGRMPA R EAQAP K FDEAQ DA+GAYVQANGGGP Sbjct 78 QDRGPSLIGVGEAAVYFQVSTGRMPARRNEAQAPNKPADFDEAQTDALGAYVQANGGGPV 137 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 V R+ +G IA QSL G+++ RGGDLFRLNCASCHNFTG+GGALSSGKYAP+L A+ Q+ Sbjct 138 VPRDENGEIANQSLIGDNVARGGDLFRLNCASCHNFTGRGGALSSGKYAPELQ-ASPAQV 196 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 TAM TGPQNMPKFS+RQLS E K+DI+AYV+ + + PGGY LGGFGP EGMA WII Sbjct 197 YTAMQTGPQNMPKFSDRQLSPEEKRDIVAYVEESRKTPPPGGYGLGGFGPTSEGMAAWII 256 Query 265 GMVAAIGLALWIGARS 280 GMVA IG ALWIGAR+ Sbjct 257 GMVAVIGAALWIGARA 272 >gi|169629055|ref|YP_001702704.1| ubiquinol-cytochrome c reductase cytochrome c subunit [Mycobacterium abscessus ATCC 19977] gi|169241022|emb|CAM62050.1| Probable ubiquinol-cytochrome c reductase cytochrome c subunit [Mycobacterium abscessus] Length=295 Score = 357 bits (917), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 184/237 (78%), Positives = 210/237 (89%), Gaps = 0/237 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 +S G+LLLIAL +AGGLA+ TPTPQVAVADE SALLRTGKQL++TSC++CHGANLQGV Sbjct 40 VSAGLLLLIALVVAGGLASTFTPTPQVAVADEDKSALLRTGKQLYETSCITCHGANLQGV 99 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 PD GPSLIGVGEAAVYFQVSTGRMPAMR EAQA RKDPIFDE Q DA+GAY+QANGGGP Sbjct 100 PDRGPSLIGVGEAAVYFQVSTGRMPAMRNEAQAQRKDPIFDEEQTDALGAYIQANGGGPQ 159 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 V+R+ DG++A +SLRGN++ RGGDLFRLNCASCHNFTG+GGALSSGK+AP+L PA EQQI Sbjct 160 VIRDRDGAVAQESLRGNNIARGGDLFRLNCASCHNFTGRGGALSSGKFAPELDPATEQQI 219 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAM 261 TAMLTGPQNMPKFS+RQL+ + KKDIIAYV+ ++E PGGY LGGFGP EGMAM Sbjct 220 YTAMLTGPQNMPKFSDRQLTVDEKKDIIAYVRASSETPDPGGYGLGGFGPTSEGMAM 276 >gi|38234201|ref|NP_939968.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium diphtheriae NCTC 13129] gi|62900985|sp|Q6NGA1.1|QCRC_CORDI RecName: Full=Probable menaquinol-cytochrome c reductase cytochrome c subunit; AltName: Full=Cytochrome bc1 complex cytochrome c subunit gi|38200463|emb|CAE50151.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium diphtheriae] Length=281 Score = 348 bits (893), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 168/278 (61%), Positives = 203/278 (74%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K R RR++RR +G + L + LT AG L +TP QVA A + AL++ GK L+D Sbjct 4 AKKVRARRKIRRTAAGAMALAVGLTGAGILVNAVTPDAQVATAQQDEQALIQEGKDLYDV 63 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHGANLQGV D GPSLIGVG A YFQV +GRMP +R EAQA RK P + EAQ A Sbjct 64 ACITCHGANLQGVKDRGPSLIGVGSGATYFQVHSGRMPMLRNEAQAKRKTPRYSEAQTLA 123 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV+ANGGGP++V N DGS+A +SLRG D+ RG DLFRLNCASCHNFTG Sbjct 124 IAAYVEANGGGPSIVYNKDGSVAMESLRGANYKDGIDPADVARGSDLFRLNCASCHNFTG 183 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP L PANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIAY+K A E Sbjct 184 RGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAKETP 243 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 GG+ LGG GP EGM MW++G+V + A+WIG+RS Sbjct 244 SQGGWNLGGLGPVTEGMMMWLVGIVVLVAAAMWIGSRS 281 >gi|227488502|ref|ZP_03918818.1| ubiquinol-cytochrome C reductase cytochrome c subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227543108|ref|ZP_03973157.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium glucuronolyticum ATCC 51866] gi|227091396|gb|EEI26708.1| ubiquinol-cytochrome C reductase cytochrome c subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227181096|gb|EEI62068.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium glucuronolyticum ATCC 51866] Length=295 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 167/279 (60%), Positives = 202/279 (73%), Gaps = 10/279 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K R RR++RR +GG+ L + L+ AG LA+ LTP QVA A + AL+ GK L++T Sbjct 17 AKKVRGRRKMRRTAAGGLALTVGLSSAGLLASALTPDAQVATAKQDQQALIVEGKSLYET 76 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 SCV CHGANLQGV D GPSLIGVGE A YFQV +GRMP +R EAQA RK F+E+Q A Sbjct 77 SCVYCHGANLQGVADRGPSLIGVGEGAAYFQVHSGRMPMLRNEAQAARKPAKFNESQTMA 136 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRG----------NDLGRGGDLFRLNCASCHNFT 181 + A+V ANGGGP + RN DGSIA +SLRG D+ RG +LFR+NCASCHNFT Sbjct 137 LAAFVAANGGGPELKRNEDGSIAMESLRGASTTEGEIHPEDVARGSELFRMNCASCHNFT 196 Query 182 GKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEA 241 G+GGALSSGKYAP L PANEQ++ AMLTGPQNMPKFS+RQLS KKDIIAY+K A E Sbjct 197 GRGGALSSGKYAPGLDPANEQELYQAMLTGPQNMPKFSDRQLSENEKKDIIAYIKAAKET 256 Query 242 RQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGG+ +GG GP EGM MWI+G+ + +WIG+RS Sbjct 257 PNPGGWTIGGLGPVTEGMVMWIVGITVLVCFTMWIGSRS 295 >gi|312140187|ref|YP_004007523.1| ubiquinol-cytochrome c reductase petc [Rhodococcus equi 103S] gi|325676931|ref|ZP_08156603.1| ubiquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus equi ATCC 33707] gi|311889526|emb|CBH48843.1| ubiquinol-cytochrome c reductase PetC [Rhodococcus equi 103S] gi|325552231|gb|EGD21921.1| ubiquinol-cytochrome c reductase cytochrome c subunit [Rhodococcus equi ATCC 33707] Length=275 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 179/256 (70%), Positives = 211/256 (83%), Gaps = 0/256 (0%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 ++G ++L++ L AG LA+ LTP PQVA A + S+AL+R GKQL+DTSC++CHGANLQGV Sbjct 20 VTGALILMMGLVSAGFLASALTPAPQVATASDDSAALIREGKQLYDTSCITCHGANLQGV 79 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 D GPSLIGVGEAAVYFQVS+GRMPA R EAQA RK FD Q DAIGAYVQ+ GGGPT Sbjct 80 QDRGPSLIGVGEAAVYFQVSSGRMPAARNEAQASRKPAKFDARQTDAIGAYVQSQGGGPT 139 Query 145 VVRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 V+R+ +G IA SLRG D+ RG +LFRLNCASCHNFTG+GGALSSGKYAP L PANEQQI Sbjct 140 VIRDENGEIAQSSLRGGDVARGSELFRLNCASCHNFTGRGGALSSGKYAPVLDPANEQQI 199 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 AM+TGPQNMPKFS+RQL+ E KKDIIAYVK ++E + PGGY LGG GP EG+AMW++ Sbjct 200 YAAMVTGPQNMPKFSDRQLTLEEKKDIIAYVKQSSENKNPGGYGLGGIGPGSEGLAMWVV 259 Query 265 GMVAAIGLALWIGARS 280 G+VA +G ALWIGARS Sbjct 260 GIVAVVGAALWIGARS 275 >gi|25028640|ref|NP_738694.1| putative cytochrome c oxidase subunit I [Corynebacterium efficiens YS-314] gi|259507699|ref|ZP_05750599.1| cytochrome c family protein [Corynebacterium efficiens YS-314] gi|62901031|sp|Q8FNR0.1|QCRC_COREF RecName: Full=Probable menaquinol-cytochrome c reductase cytochrome c subunit; AltName: Full=Cytochrome bc1 complex cytochrome c subunit gi|23493926|dbj|BAC18894.1| putative cytochrome c oxidase subunit I [Corynebacterium efficiens YS-314] gi|259164746|gb|EEW49300.1| cytochrome c family protein [Corynebacterium efficiens YS-314] Length=296 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 168/278 (61%), Positives = 201/278 (73%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K + RR+LRR ++G + L I L+ AG LA +TP Q+A A AL+ GK L+D Sbjct 19 AKKVKNRRKLRRTVAGAMALTIGLSGAGILATAITPDAQIATAQRDDQALIAEGKDLYDV 78 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHG NLQGV D GPSLIGVGE AVYFQV +GRMP R EAQA RK P + EAQ A Sbjct 79 ACITCHGMNLQGVQDRGPSLIGVGEGAVYFQVHSGRMPMQRNEAQASRKTPRYTEAQTLA 138 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV ANGGGP +V N DG++A + LRG+ D+ RGGDLFRLNCASCHNFTG Sbjct 139 IAAYVAANGGGPGLVYNEDGTLAMEELRGSNFDGQIDPLDVSRGGDLFRLNCASCHNFTG 198 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP L PANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIA++K E Sbjct 199 RGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAFIKSTKETP 258 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGY LGG GP EG+ MW IG++ I A+WIG+RS Sbjct 259 SPGGYSLGGLGPVSEGLFMWGIGIMVLIAAAMWIGSRS 296 >gi|145296153|ref|YP_001138974.1| hypothetical protein cgR_2073 [Corynebacterium glutamicum R] gi|140846073|dbj|BAF55072.1| hypothetical protein [Corynebacterium glutamicum R] Length=295 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 164/278 (59%), Positives = 201/278 (73%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K + RR++RR ++G + L I L+ AG LA +TP QVA A AL+ GK L+D Sbjct 18 AKKVKNRRKVRRTIAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDV 77 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHG NLQGV D GPSL+GVGE AVYFQV +GRMP +R EAQA RK P + EAQ A Sbjct 78 ACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQAERKAPRYTEAQTLA 137 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV ANGGGP +V N DG++A + LRG D+ RGGDLFRLNCASCHNFTG Sbjct 138 IAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVARGGDLFRLNCASCHNFTG 197 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP+L ANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIA++K E Sbjct 198 RGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAFIKSTKETP 257 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGY LGG GP EG+ MW+ G++ + A+WIG+RS Sbjct 258 SPGGYSLGGLGPVAEGLFMWVFGILVLVAAAMWIGSRS 295 >gi|300780806|ref|ZP_07090660.1| cytochrome c oxidase subunit I [Corynebacterium genitalium ATCC 33030] gi|300532513|gb|EFK53574.1| cytochrome c oxidase subunit I [Corynebacterium genitalium ATCC 33030] Length=282 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 167/277 (61%), Positives = 199/277 (72%), Gaps = 9/277 (3%) Query 13 KSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTS 72 K R RR+LRR +G + L LT AG LA+ LTP QVA A A+++ GK L+D + Sbjct 6 KKARNRRKLRRSAAGAMALTFGLTGAGLLASALTPDAQVATAQRDDQAMIQEGKDLYDVA 65 Query 73 CVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAI 132 C++CHGANLQGV D GPSLIG GE AVYFQV +GRMP M +AQA RK P + EAQ AI Sbjct 66 CITCHGANLQGVKDRGPSLIGTGEGAVYFQVHSGRMPMMSNDAQAERKKPRYTEAQTLAI 125 Query 133 GAYVQANGGGPTVVRNPDGSIATQSLRG---------NDLGRGGDLFRLNCASCHNFTGK 183 AYV ANGGGP +V N DGS+A + LRG +D+ RG +LFRLNCASCHNFTG+ Sbjct 126 AAYVAANGGGPELVYNEDGSVAMEELRGKNYDGQIQADDVARGSELFRLNCASCHNFTGR 185 Query 184 GGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQ 243 GGALSSGKYAP L PANEQ+I AMLTGPQNMPKFS+RQL+ + KKDIIA++K A E Sbjct 186 GGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLTADEKKDIIAFIKSAKETPS 245 Query 244 PGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 P G+ LGG GP EG+AMWIIG+ A+WIG+RS Sbjct 246 PSGWSLGGIGPVSEGLAMWIIGVTLVGAAAMWIGSRS 282 >gi|344044861|gb|EGV40536.1| hypothetical protein CgS9114_08131 [Corynebacterium glutamicum S9114] Length=295 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 163/278 (59%), Positives = 200/278 (72%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K + RR++RR ++G + L I L+ AG LA +TP QVA A AL+ GK L+D Sbjct 18 AKKVKNRRKVRRTVAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDV 77 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHG NLQGV D GPSL+GVGE AVYFQV +GRMP +R EAQA RK P + EAQ A Sbjct 78 ACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQAERKAPRYTEAQTLA 137 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV ANGGGP +V N DG++A + LRG D+ RGGDLFRLNCASCHNFTG Sbjct 138 IAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVARGGDLFRLNCASCHNFTG 197 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP+L ANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIA++K E Sbjct 198 RGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAFIKSTKETP 257 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGY LG GP EG+ MW+ G++ + A+WIG+RS Sbjct 258 SPGGYSLGSLGPVAEGLFMWVFGILVLVAAAMWIGSRS 295 >gi|62901034|sp|Q8NNK5.2|QCRC_CORGL RecName: Full=Menaquinol-cytochrome c reductase cytochrome c subunit; AltName: Full=Cytochrome bc1 complex cytochrome c subunit; Short=Cytochrome cc gi|13274109|emb|CAC33826.1| cytochrome c1 [Corynebacterium glutamicum] Length=283 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 163/278 (59%), Positives = 200/278 (72%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K + RR++RR ++G + L I L+ AG LA +TP QVA A AL+ GK L+D Sbjct 6 AKKVKNRRKVRRTVAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDV 65 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHG NLQGV D GPSL+GVGE AVYFQV +GRMP +R EAQA RK P + EAQ A Sbjct 66 ACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPILRNEAQAERKAPRYTEAQTLA 125 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV ANGGGP +V N DG++A + LRG D+ RGGDLFRLNCASCHNFTG Sbjct 126 IAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVARGGDLFRLNCASCHNFTG 185 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP+L ANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIA++K E Sbjct 186 RGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAFIKSTKETP 245 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGY LG GP EG+ MW+ G++ + A+WIG+RS Sbjct 246 SPGGYSLGSLGPVAEGLFMWVFGILVLVAAAMWIGSRS 283 >gi|23308907|ref|NP_601395.2| cytochrome C [Corynebacterium glutamicum ATCC 13032] gi|62391031|ref|YP_226433.1| cytochrome C1 [Corynebacterium glutamicum ATCC 13032] gi|21324961|dbj|BAB99584.1| Cytochrome c, mono- and diheme variants [Corynebacterium glutamicum ATCC 13032] gi|41326370|emb|CAF20532.1| CYTOCHROME C1 [Corynebacterium glutamicum ATCC 13032] Length=295 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 163/278 (59%), Positives = 200/278 (72%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K + RR++RR ++G + L I L+ AG LA +TP QVA A AL+ GK L+D Sbjct 18 AKKVKNRRKVRRTVAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDV 77 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHG NLQGV D GPSL+GVGE AVYFQV +GRMP +R EAQA RK P + EAQ A Sbjct 78 ACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPILRNEAQAERKAPRYTEAQTLA 137 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV ANGGGP +V N DG++A + LRG D+ RGGDLFRLNCASCHNFTG Sbjct 138 IAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVARGGDLFRLNCASCHNFTG 197 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP+L ANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIA++K E Sbjct 198 RGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAFIKSTKETP 257 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGY LG GP EG+ MW+ G++ + A+WIG+RS Sbjct 258 SPGGYSLGSLGPVAEGLFMWVFGILVLVAAAMWIGSRS 295 >gi|336325316|ref|YP_004605282.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium resistens DSM 45100] gi|336101298|gb|AEI09118.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium resistens DSM 45100] Length=298 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 171/282 (61%), Positives = 208/282 (74%), Gaps = 13/282 (4%) Query 11 GSKSG---RTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQ 67 GSKS R RR++R+ L+G + L+ ALT AG +A LTP PQ AVAD+ A++ GKQ Sbjct 16 GSKSAAQMRRRRKIRKSLAGALALVFALTGAGFIANALTPDPQTAVADKDQVAMVEEGKQ 75 Query 68 LFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEA 127 +++T+C++CHG NLQGV D GPSL+GVGE AVYFQV +GRMP +R EAQA RK P + E+ Sbjct 76 IYETACITCHGTNLQGVKDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQASRKPPRYSES 135 Query 128 QIDAIGAYVQANGGGPTVVRNPDGSIATQSLRGN----------DLGRGGDLFRLNCASC 177 Q A+ AYV ANGGGP +VR+ DGSIA SLRG D+ RG DLFRLNCASC Sbjct 136 QALALAAYVHANGGGPEIVRDKDGSIAMDSLRGKNNDGGKIDPADVARGSDLFRLNCASC 195 Query 178 HNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKV 237 HNFTG+GGALS GKYAP L PANEQ+I AMLTGPQNMPKFS+RQL+ + KKDIIAY+K Sbjct 196 HNFTGRGGALSGGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLTADEKKDIIAYIKS 255 Query 238 ATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGAR 279 A E + GG+ LGG GP EGM MW +G+V I A+WIG+R Sbjct 256 AKETPEHGGFGLGGIGPVTEGMIMWFVGIVVMIAFAMWIGSR 297 >gi|333918951|ref|YP_004492532.1| Menaquinol-cytochrome c reductase cytochrome c subunit [Amycolicicoccus subflavus DQS3-9A1] gi|333481172|gb|AEF39732.1| Menaquinol-cytochrome c reductase cytochrome c subunit [Amycolicicoccus subflavus DQS3-9A1] Length=251 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 172/251 (69%), Positives = 200/251 (80%), Gaps = 0/251 (0%) Query 30 LLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGP 89 +LL+ L AG +AA +TP PQ+A A E S+AL+R GKQL+DTSCV+CHG NLQGVPD GP Sbjct 1 MLLMGLVGAGVIAAAITPEPQIATAQEDSAALIREGKQLYDTSCVTCHGVNLQGVPDRGP 60 Query 90 SLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNP 149 SLIGVGEA+VYFQV++GRMPAMR EAQA RK F+ QIDA+GAY+QANGGGP V R+ Sbjct 61 SLIGVGEASVYFQVASGRMPAMRNEAQALRKPAKFEARQIDALGAYIQANGGGPIVPRDA 120 Query 150 DGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAML 209 DG +AT SLRGND RGG+LFR NCASCHNFTG+GGALS+GK+AP+L E I TAML Sbjct 121 DGEVATASLRGNDPARGGELFRQNCASCHNFTGQGGALSAGKWAPELVGVPEPDIYTAML 180 Query 210 TGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAA 269 TGPQNMP FS+RQLS E K+DIIAYVK E R PGGY LGGFGP EG+ MW++G Sbjct 181 TGPQNMPVFSDRQLSPEDKRDIIAYVKAVNEPRNPGGYGLGGFGPVSEGVTMWVLGTAVV 240 Query 270 IGLALWIGARS 280 IG A+WIGARS Sbjct 241 IGAAMWIGARS 251 >gi|305681003|ref|ZP_07403810.1| menaquinol-cytochrome c reductase cytochrome c subunit [Corynebacterium matruchotii ATCC 14266] gi|305659208|gb|EFM48708.1| menaquinol-cytochrome c reductase cytochrome c subunit [Corynebacterium matruchotii ATCC 14266] Length=288 Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 165/273 (61%), Positives = 197/273 (73%), Gaps = 9/273 (3%) Query 17 TRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSC 76 +RR+LRR L+ + L I LT G L LTPT QVA A AL++ GK L+D +CV+C Sbjct 16 SRRKLRRILASALALAIGLTATGVLVNALTPTAQVATAQPDEQALIQQGKDLYDVACVTC 75 Query 77 HGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYV 136 HG NLQG+ GPSLIGVG AVYFQV +GRMP +R EAQA RK P + EAQ AI AYV Sbjct 76 HGTNLQGIEGRGPSLIGVGSGAVYFQVHSGRMPMLRNEAQAARKTPRYTEAQTLAIAAYV 135 Query 137 QANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTGKGGAL 187 ANGGGP +V N DG++A +SLRG D+ RG DLFRLNCASCHNFTG+GGAL Sbjct 136 AANGGGPEIVYNEDGTVAQESLRGANYDGKINPADVARGSDLFRLNCASCHNFTGRGGAL 195 Query 188 SSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGY 247 SSGKYAP L PANEQ+I AML+GPQNMPKFS+RQLS + KKDIIA++K + E P G+ Sbjct 196 SSGKYAPYLDPANEQEIYQAMLSGPQNMPKFSDRQLSADEKKDIIAFIKYSKENPSPSGW 255 Query 248 LLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 LGG GP EGM MW++G+V + ALWIG+RS Sbjct 256 DLGGIGPVAEGMFMWLVGIVVLVAAALWIGSRS 288 >gi|225021888|ref|ZP_03711080.1| hypothetical protein CORMATOL_01920 [Corynebacterium matruchotii ATCC 33806] gi|224945345|gb|EEG26554.1| hypothetical protein CORMATOL_01920 [Corynebacterium matruchotii ATCC 33806] Length=304 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 165/273 (61%), Positives = 197/273 (73%), Gaps = 9/273 (3%) Query 17 TRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSC 76 +RR+LRR L+ + L I LT G L LTPT QVA A AL++ GK L+D +CV+C Sbjct 32 SRRKLRRILASALALAIGLTATGVLVNALTPTAQVATAQPDEQALIQQGKDLYDVACVTC 91 Query 77 HGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYV 136 HG NLQG+ GPSLIGVG AVYFQV +GRMP +R EAQA RK P + EAQ AI AYV Sbjct 92 HGTNLQGIEGRGPSLIGVGSGAVYFQVHSGRMPMLRNEAQAARKTPRYTEAQTLAIAAYV 151 Query 137 QANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTGKGGAL 187 ANGGGP +V N DG++A +SLRG D+ RG DLFRLNCASCHNFTG+GGAL Sbjct 152 AANGGGPEIVYNEDGTVAQESLRGANYDGKINPADVARGSDLFRLNCASCHNFTGRGGAL 211 Query 188 SSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGY 247 SSGKYAP L PANEQ+I AML+GPQNMPKFS+RQLS + KKDIIA++K + E P G+ Sbjct 212 SSGKYAPYLDPANEQEIYQAMLSGPQNMPKFSDRQLSADEKKDIIAFIKYSKENPSPSGW 271 Query 248 LLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 LGG GP EGM MW++G+V + ALWIG+RS Sbjct 272 DLGGIGPVAEGMFMWLVGIVVLVAAALWIGSRS 304 >gi|10336541|dbj|BAB13771.1| cytochrome cc1 subunit [Corynebacterium glutamicum] Length=283 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 162/278 (59%), Positives = 199/278 (72%), Gaps = 9/278 (3%) Query 12 SKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDT 71 +K + RR++RR ++G + L I L+ AG LA +TP QVA A AL+ GK L+ Sbjct 6 AKKVKNRRKVRRTVAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYAV 65 Query 72 SCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDA 131 +C++CHG NLQGV D GPSL+GVGE AVYFQV +GRMP +R EAQA RK P + EAQ A Sbjct 66 ACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQAERKAPRYTEAQTLA 125 Query 132 IGAYVQANGGGPTVVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTG 182 I AYV ANGGGP +V N DG++A + LRG D+ RGGDLFRLNCASCHNFTG Sbjct 126 IAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVARGGDLFRLNCASCHNFTG 185 Query 183 KGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEAR 242 +GGALSSGKYAP+L ANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIA++K E Sbjct 186 RGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAFIKSTKETP 245 Query 243 QPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 PGGY LG GP EG+ MW+ G++ + A+WIG+RS Sbjct 246 SPGGYSLGSLGPVAEGLFMWVFGILVLVAAAMWIGSRS 283 >gi|29365473|dbj|BAC66446.1| cytochrome cc of cytochrome c reductase complex [Rhodococcus rhodochrous] Length=276 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/243 (73%), Positives = 203/243 (84%), Gaps = 1/243 (0%) Query 38 AGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEA 97 AG LA+ LTP PQVA A+E SAL+R GKQL++TSCV+CHGANLQGV D GPSLIGVGEA Sbjct 35 AGFLASALTPAPQVATANEDQSALIREGKQLYETSCVTCHGANLQGVQDRGPSLIGVGEA 94 Query 98 AVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQS 157 AVYFQVSTGRMP MR EAQA RK P FD AQ DA GAY+QANGGGPT++R+ +G IA S Sbjct 95 AVYFQVSTGRMPMMRNEAQALRKTPKFDAAQTDAFGAYIQANGGGPTLIRDENGEIAQSS 154 Query 158 LRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPK 217 L +D+ RG +LFR NCASCHNFTG+GGALSSGK+AP L PANEQQI TAMLTGPQNMPK Sbjct 155 L-ADDVARGSELFRQNCASCHNFTGRGGALSSGKFAPVLDPANEQQIYTAMLTGPQNMPK 213 Query 218 FSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIG 277 FS+RQL+ E K+DIIAYVK ++E + PGGY LGGFGPA EG MW++G+VA +G ALWIG Sbjct 214 FSDRQLTLEEKQDIIAYVKASSETQSPGGYGLGGFGPASEGPTMWVVGIVAVVGAALWIG 273 Query 278 ARS 280 ARS Sbjct 274 ARS 276 >gi|343924168|ref|ZP_08763731.1| menaquinol-cytochrome c reductase cytochrome c subunit [Gordonia alkanivorans NBRC 16433] gi|343765973|dbj|GAA10657.1| menaquinol-cytochrome c reductase cytochrome c subunit [Gordonia alkanivorans NBRC 16433] Length=283 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 168/255 (66%), Positives = 207/255 (82%), Gaps = 0/255 (0%) Query 26 SGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVP 85 SG ++LL L +AG LA+VLTP PQVAVADES++A++ G++L++TSC++CHGANLQGV Sbjct 29 SGTIVLLAGLVMAGVLASVLTPDPQVAVADESNAAMINDGRKLYETSCITCHGANLQGVV 88 Query 86 DHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTV 145 D GP+L+GVG+AAVYFQVSTGRMPA RGEAQA RK F QID +GA++QA GGGP V Sbjct 89 DRGPALLGVGDAAVYFQVSTGRMPAARGEAQAQRKPAKFTTEQIDQLGAFIQAEGGGPQV 148 Query 146 VRNPDGSIATQSLRGNDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQIL 205 R+ +G +A+ SLRG+ +GRG +LFRLNCASCHNFTG+GGALSSGKYAP L +E QI Sbjct 149 PRDANGEVASSSLRGDSIGRGSELFRLNCASCHNFTGRGGALSSGKYAPVLDGVDEAQIY 208 Query 206 TAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIG 265 TAMLTGPQNMPKFSNRQL+ E KKDIIAYVK TEA+ GG LGGFGP EGM MW +G Sbjct 209 TAMLTGPQNMPKFSNRQLNPEEKKDIIAYVKYVTEAQPSGGLGLGGFGPVSEGMVMWFVG 268 Query 266 MVAAIGLALWIGARS 280 ++A + A+W+G+R+ Sbjct 269 VIAIVAGAMWMGSRA 283 >gi|317506583|ref|ZP_07964375.1| cytochrome c [Segniliparus rugosus ATCC BAA-974] gi|316255092|gb|EFV14370.1| cytochrome c [Segniliparus rugosus ATCC BAA-974] Length=301 Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 168/287 (59%), Positives = 204/287 (72%), Gaps = 15/287 (5%) Query 9 SGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQL 68 S G R + RRR ++ L AG +LTP QVA ADE +L+R GKQL Sbjct 15 SEGGDEQRVSGKFRRRARSAAVIFTGLVAAGFATTLLTPHAQVAKADEKDLSLIRDGKQL 74 Query 69 FDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQ 128 ++TSC++CHGANL+GV + GPSLIGVG AAVYFQVS+GRMPA R EAQ RK +DE Q Sbjct 75 YETSCITCHGANLEGVQNQGPSLIGVGSAAVYFQVSSGRMPAARNEAQIKRKQTDWDEKQ 134 Query 129 IDAIGAYVQANGGGPTVV--RNPDGS----------IATQSLRGND---LGRGGDLFRLN 173 I+ + AYV + G GP+VV +NPDG+ +A +SLRG D + RGG+LFR+N Sbjct 135 IEEVSAYVDSFGEGPSVVYEKNPDGTFKLDADGEKIVAQESLRGKDPESIARGGELFRMN 194 Query 174 CASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIA 233 CASCHN+TG+GGALSSGK+AP L NEQQI AMLTGPQNMPKFS+ QLS EAKKDIIA Sbjct 195 CASCHNYTGRGGALSSGKFAPPLDAPNEQQIYAAMLTGPQNMPKFSDSQLSPEAKKDIIA 254 Query 234 YVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 Y+K ATE PGGY LGGFGP EG AM +G+VA +GLA+WIG+R+ Sbjct 255 YIKTATETNSPGGYDLGGFGPVSEGAAMAFVGVVALLGLAMWIGSRT 301 >gi|296393480|ref|YP_003658364.1| cytochrome C class I [Segniliparus rotundus DSM 44985] gi|296180627|gb|ADG97533.1| cytochrome c class I [Segniliparus rotundus DSM 44985] Length=294 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 170/293 (59%), Positives = 206/293 (71%), Gaps = 15/293 (5%) Query 3 KLGFTRSGGSKSGRTRRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALL 62 KL S + R + RRR +L L AG +LTP QVA ADE +L+ Sbjct 2 KLFHQHSSDGDAPRKAGKFRRRARTAAVLFSGLVAAGFATTLLTPHAQVAKADEKDLSLI 61 Query 63 RTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDP 122 R GKQL++TSC++CHGANL+G+ GPSLIGVG AAVYFQVS+GRMPA R EAQ RK Sbjct 62 RDGKQLYETSCITCHGANLEGIAGQGPSLIGVGNAAVYFQVSSGRMPAARNEAQIRRKQS 121 Query 123 IFDEAQIDAIGAYVQANGGGPTVV--RNPDGSI----------ATQSLRGND---LGRGG 167 +DE QI+A+GAY+ + G GP+VV +NPDGS+ A +SLRG D + RGG Sbjct 122 DWDEKQIEAVGAYIDSYGEGPSVVYEKNPDGSVKLDADGNKVLAQESLRGKDPDSVARGG 181 Query 168 DLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEA 227 +LFR+NCASCHN+TG+GGALSSGK+AP L NEQQI AMLTGPQNMPKFS+ QLS EA Sbjct 182 ELFRMNCASCHNYTGRGGALSSGKFAPPLDAPNEQQIYAAMLTGPQNMPKFSDGQLSPEA 241 Query 228 KKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAAIGLALWIGARS 280 KKDIIAY+K ATE GGY LGGFGP EG AM +G+VA +GLA+WIG+R+ Sbjct 242 KKDIIAYIKTATETNAQGGYSLGGFGPVSEGAAMAFVGVVAILGLAMWIGSRT 294 >gi|213965262|ref|ZP_03393459.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium amycolatum SK46] gi|213952114|gb|EEB63499.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium amycolatum SK46] Length=296 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 168/273 (62%), Positives = 203/273 (75%), Gaps = 11/273 (4%) Query 18 RRRLRRRLSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCH 77 RR++RR SG + + +ALT AG LA LTP Q A A + +A+++ GK+L+D +C++CH Sbjct 23 RRKMRRTASGIMAMALALTGAGFLANALTPDAQTATAQQDEAAMIQQGKELYDVACITCH 82 Query 78 GANLQGVPDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQ 137 GANLQGV D G SLIGVGE +VYFQV +GRMP +R EAQA RK P + E Q AI AYVQ Sbjct 83 GANLQGVKDRGKSLIGVGEGSVYFQVHSGRMPMLRNEAQAARKTPRYSEEQTLAIAAYVQ 142 Query 138 ANGGGPTVVRNPDGSIATQSLRGN-----------DLGRGGDLFRLNCASCHNFTGKGGA 186 ANGGG +VR+ DGSIA +SLRG D+ RG +LFRLNCASCHNFTG+GGA Sbjct 143 ANGGGAGIVRDEDGSIAMESLRGKNAGPNGEIDKADVARGSELFRLNCASCHNFTGRGGA 202 Query 187 LSSGKYAPDLAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGG 246 LSSGKYAP L PANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIAY+K A E GG Sbjct 203 LSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKNAKETPTQGG 262 Query 247 YLLGGFGPAPEGMAMWIIGMVAAIGLALWIGAR 279 + LGG GP EG+AMWI+G+VA + ALWIG+R Sbjct 263 WGLGGIGPVTEGLAMWIVGIVALVAAALWIGSR 295 >gi|337291149|ref|YP_004630170.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium ulcerans BR-AD22] gi|334697260|gb|AEG82057.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium ulcerans 809] gi|334699455|gb|AEG84251.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium ulcerans BR-AD22] Length=298 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/263 (61%), Positives = 191/263 (73%), Gaps = 9/263 (3%) Query 27 GGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPD 86 G + L + LT G L +TP QVA A + A+++ GK L+D +C++CHGANLQGV D Sbjct 36 GALALAVGLTGTGLLVNAVTPDAQVATARQDEQAMIQEGKDLYDVACITCHGANLQGVKD 95 Query 87 HGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVV 146 GPSLIGVG A YFQV +GRMP +R EAQA RK P + EAQ A+ AYV+ANGGGP +V Sbjct 96 RGPSLIGVGSGATYFQVHSGRMPMLRNEAQAMRKAPRYSEAQTLALAAYVEANGGGPGIV 155 Query 147 RNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLA 197 N DGS+A +LRG D+ RG DLFRLNCASCHNFTG+GGALSSGKYAP L Sbjct 156 YNEDGSVALDTLRGANYNGKIDPADVARGSDLFRLNCASCHNFTGRGGALSSGKYAPVLD 215 Query 198 PANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPE 257 PANEQ+I AMLTGPQNMPKFS+RQLS + KKDIIAY+K A E PGG+ LGG GP E Sbjct 216 PANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAKETPSPGGWNLGGLGPVSE 275 Query 258 GMAMWIIGMVAAIGLALWIGARS 280 GM MW++G+V + ALWIG+RS Sbjct 276 GMLMWLVGIVVLVAAALWIGSRS 298 >gi|306836520|ref|ZP_07469491.1| cytochrome c family protein [Corynebacterium accolens ATCC 49726] gi|304567610|gb|EFM43204.1| cytochrome c family protein [Corynebacterium accolens ATCC 49726] Length=295 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 159/265 (60%), Positives = 196/265 (74%), Gaps = 9/265 (3%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 L+GG L I LT AG LA+ LTP QVA A++ AL++ GK ++DT+C++CHGANLQG+ Sbjct 31 LAGGFALAIGLTGAGVLASALTPDAQVATAEKDDQALVQEGKDIYDTACITCHGANLQGI 90 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 GPSL+G+G +VYFQV +GRMP M +AQA RK P + E Q A+ AYV ANGGG Sbjct 91 EGRGPSLVGIGAGSVYFQVHSGRMPMMSNDAQAERKAPRYTEQQTLALAAYVAANGGGAD 150 Query 145 VVRNPDGSIATQSLRG---------NDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPD 195 +V N DGSIA +SLRG D+ +G +LFR+NCASCHNFTG+GGALSSGKYAP+ Sbjct 151 IVYNDDGSIAQESLRGANYNGQIQAEDVAKGSELFRMNCASCHNFTGQGGALSSGKYAPE 210 Query 196 LAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPA 255 LAPANEQ+I AMLTGPQNMPKFS+RQL+ + KKDIIAY+K A E P G+ LGG GP Sbjct 211 LAPANEQEIYQAMLTGPQNMPKFSDRQLTADEKKDIIAYLKSAEETPSPAGWDLGGLGPV 270 Query 256 PEGMAMWIIGMVAAIGLALWIGARS 280 EG+AMWIIG+ A A+WIG+RS Sbjct 271 AEGLAMWIIGISALCAAAMWIGSRS 295 >gi|227503251|ref|ZP_03933300.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium accolens ATCC 49725] gi|227075754|gb|EEI13717.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium accolens ATCC 49725] Length=295 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 159/265 (60%), Positives = 196/265 (74%), Gaps = 9/265 (3%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 L+GG L I LT AG LA+ LTP QVA A++ AL++ GK ++DT+C++CHGANLQG+ Sbjct 31 LAGGFALAIGLTGAGILASALTPDAQVATAEKDDQALVQEGKDIYDTACITCHGANLQGI 90 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 GPSL+G+G +VYFQV +GRMP M +AQA RK P + E Q A+ AYV ANGGG Sbjct 91 EGRGPSLVGIGAGSVYFQVHSGRMPMMSNDAQAERKAPRYTEQQTLALAAYVAANGGGAD 150 Query 145 VVRNPDGSIATQSLRG---------NDLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPD 195 +V N DGSIA +SLRG D+ +G +LFR+NCASCHNFTG+GGALSSGKYAP+ Sbjct 151 IVYNDDGSIAQESLRGANYNGQIQAEDVAKGSELFRMNCASCHNFTGQGGALSSGKYAPE 210 Query 196 LAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPA 255 LAPANEQ+I AMLTGPQNMPKFS+RQL+ + KKDIIAY+K A E P G+ LGG GP Sbjct 211 LAPANEQEIYQAMLTGPQNMPKFSDRQLTADEKKDIIAYLKSAEETPSPAGWDLGGLGPV 270 Query 256 PEGMAMWIIGMVAAIGLALWIGARS 280 EG+AMWIIG+ A A+WIG+RS Sbjct 271 AEGLAMWIIGISALCAAAMWIGSRS 295 >gi|334563274|ref|ZP_08516265.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium bovis DSM 20582] Length=256 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 159/256 (63%), Positives = 191/256 (75%), Gaps = 10/256 (3%) Query 35 LTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 94 +T AG LA LTP PQ A A+ +AL++ GK+++ +C++CHGANLQGV D GP+L+GV Sbjct 1 MTGAGFLADALTPDPQTATANTDEAALVQQGKEIYQVACITCHGANLQGVRDRGPNLVGV 60 Query 95 GEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIA 154 GE AVYFQV +GRMP +R EAQA RK P ++E Q A+ AYV ANGGGP +VR+ DGSI+ Sbjct 61 GEGAVYFQVHSGRMPMLRNEAQAGRKAPRYNEQQTLALAAYVNANGGGPGIVRDADGSIS 120 Query 155 TQSLRGN----------DLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQI 204 +SLRG D+ RG DLFRLNCASCHNFTGKGGALS GKYAP L PANEQ+I Sbjct 121 MESLRGENNKNGEIDPKDVARGSDLFRLNCASCHNFTGKGGALSGGKYAPPLGPANEQEI 180 Query 205 LTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWII 264 AMLTGPQNMPKFS+RQL+ + KKDIIAY+K A E GGY LGG GP EGM MW + Sbjct 181 YQAMLTGPQNMPKFSDRQLTADEKKDIIAYIKSAKETPSQGGYDLGGIGPVTEGMLMWFV 240 Query 265 GMVAAIGLALWIGARS 280 G+V IG A+WIG+RS Sbjct 241 GIVVLIGAAMWIGSRS 256 >gi|296117510|ref|ZP_06836094.1| cytochrome c family protein [Corynebacterium ammoniagenes DSM 20306] gi|295969241|gb|EFG82482.1| cytochrome c family protein [Corynebacterium ammoniagenes DSM 20306] Length=298 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 159/265 (60%), Positives = 192/265 (73%), Gaps = 9/265 (3%) Query 25 LSGGVLLLIALTIAGGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGV 84 L+G L + LT AG LA LTP QVA A AL++ G ++D +C++CHGANLQGV Sbjct 34 LAGAFALTVGLTGAGVLATALTPDAQVATAQRDDQALIQEGNDIYDVACITCHGANLQGV 93 Query 85 PDHGPSLIGVGEAAVYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPT 144 D GPSLIGVG +VYFQV +GRMP M +AQA RK P + E Q A+ AYV ANGGGP Sbjct 94 EDRGPSLIGVGAGSVYFQVHSGRMPMMSNDAQAERKTPRYTEQQTLALAAYVAANGGGPD 153 Query 145 VVRNPDGSIATQSLRGN---------DLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPD 195 +V N DGSIA + LRG+ D+ RGG+LFR+NCASCHNFTGKGG+LSSGKYAP Sbjct 154 IVYNEDGSIAMEELRGSNYNGQIQSEDVARGGELFRMNCASCHNFTGKGGSLSSGKYAPP 213 Query 196 LAPANEQQILTAMLTGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPA 255 L PANEQ+I AMLTGPQNMPKFS+RQLS + KKD+IAY+K A+E P G+ LGG GP Sbjct 214 LGPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDLIAYIKSASETPSPAGWGLGGLGPV 273 Query 256 PEGMAMWIIGMVAAIGLALWIGARS 280 EG+AMWIIG+ A A+W+G+RS Sbjct 274 AEGLAMWIIGITALCAAAMWMGSRS 298 >gi|300858842|ref|YP_003783825.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium pseudotuberculosis FRC41] gi|300686296|gb|ADK29218.1| ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium pseudotuberculosis FRC41] gi|302206550|gb|ADL10892.1| Ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium pseudotuberculosis C231] gi|302331105|gb|ADL21299.1| Ubiquinol-cytochrome C reductase cytochrome C subunit [Corynebacterium pseudotuberculosis 1002] Length=298 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 156/251 (63%), Positives = 185/251 (74%), Gaps = 9/251 (3%) Query 39 GGLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGVGEAA 98 G L +TP QVA A + A+++ GK L+D +C++CHGANLQGV D GPSLIGVG A Sbjct 48 GLLVNAVTPDAQVATARQDEQAMIQEGKDLYDVACITCHGANLQGVKDRGPSLIGVGSGA 107 Query 99 VYFQVSTGRMPAMRGEAQAPRKDPIFDEAQIDAIGAYVQANGGGPTVVRNPDGSIATQSL 158 YFQV +GRMP +R EAQA RK P + EAQ A+ AYV+ANGGGP +V N DGS+A +L Sbjct 108 TYFQVHSGRMPMLRNEAQAMRKAPRYSEAQTLALAAYVEANGGGPGIVYNEDGSVALDTL 167 Query 159 RGN---------DLGRGGDLFRLNCASCHNFTGKGGALSSGKYAPDLAPANEQQILTAML 209 RG D+ RG DLFRLNCASCHNFTG+GGALSSGKYAP L PANEQ+I AML Sbjct 168 RGANYNGKIDPADVARGSDLFRLNCASCHNFTGRGGALSSGKYAPVLDPANEQEIYQAML 227 Query 210 TGPQNMPKFSNRQLSFEAKKDIIAYVKVATEARQPGGYLLGGFGPAPEGMAMWIIGMVAA 269 TGPQNMPKFS+RQLS + KKDIIAY+K A E PGG+ LGG GP EGM MW++G+V Sbjct 228 TGPQNMPKFSDRQLSADEKKDIIAYIKSAKETPSPGGWNLGGLGPVSEGMLMWLVGIVVL 287 Query 270 IGLALWIGARS 280 + ALWIG+RS Sbjct 288 VAAALWIGSRS 298 Lambda K H 0.318 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 442782057568 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40