BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2195
Length=429
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609332|ref|NP_216711.1| Rieske iron-sulfur protein QcrA [My... 877 0.0
gi|340627200|ref|YP_004745652.1| putative Rieske iron-sulfur pro... 875 0.0
gi|31793374|ref|NP_855867.1| Rieske iron-sulfur protein QcrA [My... 875 0.0
gi|254232348|ref|ZP_04925675.1| rieske iron-sulfur protein qcrA ... 874 0.0
gi|308232065|ref|ZP_07663992.1| Rieske iron-sulfur protein qcrA ... 822 0.0
gi|240168254|ref|ZP_04746913.1| Rieske iron-sulfur protein qcrA ... 720 0.0
gi|289745468|ref|ZP_06504846.1| ubiquinol-cytochrome c reductase... 715 0.0
gi|183983230|ref|YP_001851521.1| Rieske iron-sulfur protein QcrA... 702 0.0
gi|118618837|ref|YP_907169.1| Rieske iron-sulfur protein QcrA [M... 702 0.0
gi|342859905|ref|ZP_08716558.1| ubiquinol-cytochrome C reductase... 675 0.0
gi|108800259|ref|YP_640456.1| Rieske (2Fe-2S) domain-containing ... 656 0.0
gi|120404530|ref|YP_954359.1| Rieske (2Fe-2S) domain-containing ... 652 0.0
gi|118466759|ref|YP_881501.1| ubiquinol-cytochrome C reductase, ... 650 0.0
gi|41408032|ref|NP_960868.1| QcrA [Mycobacterium avium subsp. pa... 648 0.0
gi|336461918|gb|EGO40771.1| Rieske Fe-S protein [Mycobacterium a... 645 0.0
gi|145223541|ref|YP_001134219.1| Rieske (2Fe-2S) domain-containi... 642 0.0
gi|333990348|ref|YP_004522962.1| Rieske iron-sulfur protein QcrA... 639 0.0
gi|15827403|ref|NP_301666.1| Rieske iron-sulphur reductase compo... 633 2e-179
gi|118473759|ref|YP_888539.1| ubiquinol-cytochrome C reductase i... 631 8e-179
gi|254822833|ref|ZP_05227834.1| putative ubiquinol-cytochrome c ... 625 4e-177
gi|296166063|ref|ZP_06848510.1| probable ubiquinol-cytochrome c ... 622 4e-176
gi|169629054|ref|YP_001702703.1| ubiquinol-cytochrome c reductas... 581 8e-164
gi|343924167|ref|ZP_08763730.1| menaquinol-cytochrome c reductas... 454 1e-125
gi|54023696|ref|YP_117938.1| putative cytochrome c component [No... 451 8e-125
gi|296393479|ref|YP_003658363.1| Rieske (2Fe-2S) iron-sulfur dom... 449 4e-124
gi|111018145|ref|YP_701117.1| ubiquinol-cytochrome c reductase i... 447 2e-123
gi|226307084|ref|YP_002767044.1| menaquinol-cytochrome c reducta... 447 2e-123
gi|312140188|ref|YP_004007524.1| ubiquinol-cytochrome c reductas... 444 1e-122
gi|226360274|ref|YP_002778052.1| menaquinol-cytochrome c reducta... 444 1e-122
gi|296140390|ref|YP_003647633.1| Rieske (2Fe-2S) iron-sulfur dom... 443 3e-122
gi|262202949|ref|YP_003274157.1| rieske (2Fe-2S) iron-sulfur dom... 443 3e-122
gi|229490440|ref|ZP_04384281.1| ubiquinol-cytochrome c reductase... 442 6e-122
gi|317506582|ref|ZP_07964374.1| Rieske domain-containing protein... 440 2e-121
gi|326382514|ref|ZP_08204205.1| Rieske (2Fe-2S) iron-sulfur doma... 439 4e-121
gi|333918950|ref|YP_004492531.1| Ubiquinol-cytochrome c reductas... 433 2e-119
gi|29365474|dbj|BAC66447.1| Fe-S protein of cytochrome c reducta... 414 1e-113
gi|237785312|ref|YP_002906017.1| ubiquinol-cytochrome c reductas... 408 8e-112
gi|38234200|ref|NP_939967.1| ubiquinol-cytochrome C reductase ir... 402 5e-110
gi|213965204|ref|ZP_03393401.1| ubiquinol-cytochrome C reductase... 402 6e-110
gi|255325370|ref|ZP_05366476.1| menaquinol-cytochrome c reductas... 400 2e-109
gi|227503252|ref|ZP_03933301.1| ubiquinol-cytochrome C reductase... 399 4e-109
gi|306836519|ref|ZP_07469490.1| ubiquinol-cytochrome C reductase... 399 5e-109
gi|319950680|ref|ZP_08024581.1| ubiquinol-cytochrome c reductase... 399 7e-109
gi|256375513|ref|YP_003099173.1| Rieske (2Fe-2S) domain-containi... 397 2e-108
gi|227488503|ref|ZP_03918819.1| ubiquinol-cytochrome C reductase... 396 3e-108
gi|340794100|ref|YP_004759563.1| ubiquinol-cytochrome C reductas... 395 5e-108
gi|344044860|gb|EGV40535.1| hypothetical protein CgS9114_08126 [... 394 1e-107
gi|145296152|ref|YP_001138973.1| hypothetical protein cgR_2072 [... 394 1e-107
gi|225021889|ref|ZP_03711081.1| hypothetical protein CORMATOL_01... 394 2e-107
gi|19553392|ref|NP_601394.1| Rieske Fe-S protein [Corynebacteriu... 393 3e-107
>gi|15609332|ref|NP_216711.1| Rieske iron-sulfur protein QcrA [Mycobacterium tuberculosis H37Rv]
gi|15841686|ref|NP_336723.1| iron-sulfur protein, putative [Mycobacterium tuberculosis CDC1551]
gi|148662012|ref|YP_001283535.1| putative iron-sulfur protein [Mycobacterium tuberculosis H37Ra]
45 more sequence titles
Length=429
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%)
Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ
Sbjct 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE
Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID
Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG
Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT
Sbjct 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS
Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG
Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
Query 421 PAFWERTTT 429
PAFWERTTT
Sbjct 421 PAFWERTTT 429
>gi|340627200|ref|YP_004745652.1| putative Rieske iron-sulfur protein QcrA [Mycobacterium canettii
CIPT 140010059]
gi|340005390|emb|CCC44549.1| putative Rieske iron-sulfur protein QcrA [Mycobacterium canettii
CIPT 140010059]
Length=429
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/429 (99%), Positives = 428/429 (99%), Gaps = 0/429 (0%)
Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
MSRADDDAVGVPP CGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ
Sbjct 1 MSRADDDAVGVPPACGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE
Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID
Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG
Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT
Sbjct 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS
Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG
Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
Query 421 PAFWERTTT 429
PAFWERTTT
Sbjct 421 PAFWERTTT 429
>gi|31793374|ref|NP_855867.1| Rieske iron-sulfur protein QcrA [Mycobacterium bovis AF2122/97]
gi|121638076|ref|YP_978300.1| putative Rieske iron-sulfur protein QcrA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224990570|ref|YP_002645257.1| putative Rieske iron-sulfur protein [Mycobacterium bovis BCG
str. Tokyo 172]
gi|62901006|sp|Q7TYX4.1|QCRA_MYCBO RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein
gi|31618966|emb|CAD97071.1| Probable Rieske iron-sulfur protein QcrA [Mycobacterium bovis
AF2122/97]
gi|121493724|emb|CAL72199.1| Probable Rieske iron-sulfur protein QcrA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224773683|dbj|BAH26489.1| putative Rieske iron-sulfur protein [Mycobacterium bovis BCG
str. Tokyo 172]
gi|341602114|emb|CCC64788.1| probable Rieske iron-sulfur protein QcrA [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=429
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%)
Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ
Sbjct 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE
Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID
Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG
Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPED+DAGGMETVFPWRESDGDGT
Sbjct 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDIDAGGMETVFPWRESDGDGT 300
Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS
Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG
Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
Query 421 PAFWERTTT 429
PAFWERTTT
Sbjct 421 PAFWERTTT 429
>gi|254232348|ref|ZP_04925675.1| rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis C]
gi|124601407|gb|EAY60417.1| rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis C]
Length=429
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/429 (99%), Positives = 428/429 (99%), Gaps = 0/429 (0%)
Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ
Sbjct 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60
Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE
Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120
Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID
Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180
Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG
Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240
Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
KKAVLWTSGWTP YQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT
Sbjct 241 KKAVLWTSGWTPCYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300
Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS
Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360
Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG
Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420
Query 421 PAFWERTTT 429
PAFWERTTT
Sbjct 421 PAFWERTTT 429
>gi|308232065|ref|ZP_07663992.1| Rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis SUMu001]
gi|308372168|ref|ZP_07667315.1| Rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis SUMu004]
gi|308377939|ref|ZP_07668630.1| Rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis SUMu009]
8 more sequence titles
Length=403
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)
Query 27 VPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGT 86
+PGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGT
Sbjct 1 MPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGT 60
Query 87 KAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLS 146
KAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLS
Sbjct 61 KAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLS 120
Query 147 ILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLS 206
ILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLS
Sbjct 121 ILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLS 180
Query 207 FGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG 266
FGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG
Sbjct 181 FGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG 240
Query 267 TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKP 326
TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKP
Sbjct 241 TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKP 300
Query 327 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK 386
SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK
Sbjct 301 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK 360
Query 387 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT
Sbjct 361 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 403
>gi|240168254|ref|ZP_04746913.1| Rieske iron-sulfur protein qcrA [Mycobacterium kansasii ATCC
12478]
Length=413
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/396 (87%), Positives = 368/396 (93%), Gaps = 0/396 (0%)
Query 34 DGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAE 93
D D KA A EPDEAALAAMS QELL LGGKLDGV+IAYKEPRWPVEGTKAEKRAE
Sbjct 18 DTGSDTDKAPAAAHEPDEAALAAMSQQELLDLGGKLDGVQIAYKEPRWPVEGTKAEKRAE 77
Query 94 RSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIG 153
R VAVWLLLGG FGLALLL+FLFWPW++KA+ F+YSL TPLYGLTFGLSIL+IAIG
Sbjct 78 RGVAVWLLLGGAFGLALLLVFLFWPWQYKASGESGSFLYSLATPLYGLTFGLSILAIAIG 137
Query 154 AVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGA 213
AVL+QKRFIPEEI+IQ+RHDGASREIDRKTVVANLTDAFE STIRRRKL+GLS G+G+GA
Sbjct 138 AVLFQKRFIPEEITIQDRHDGASREIDRKTVVANLTDAFESSTIRRRKLVGLSLGMGLGA 197
Query 214 FGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPF 273
FGLGTLVAFAGGLIKNPWKPVVPTAEG KA LWTSGWTPRY+GETIYLARATG DGPPF
Sbjct 198 FGLGTLVAFAGGLIKNPWKPVVPTAEGMKAELWTSGWTPRYKGETIYLARATGLHDGPPF 257
Query 274 IKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVV 333
IK+RPEDMDAGGMETVFPWRESDGDGTTVESH KLQ IAMGIRNPVMLIRIKPSDLG++V
Sbjct 258 IKLRPEDMDAGGMETVFPWRESDGDGTTVESHEKLQAIAMGIRNPVMLIRIKPSDLGKMV 317
Query 334 KRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAA 393
KR+GQESFNFGEFFA+TKVCSHLGCP+SLYEQQ+YRILCPCHQSQFDALHFAKPIFGPAA
Sbjct 318 KRQGQESFNFGEFFAYTKVCSHLGCPASLYEQQTYRILCPCHQSQFDALHFAKPIFGPAA 377
Query 394 RALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
RALAQLPITID++GY VANGDFVEPVGPAFWERTT+
Sbjct 378 RALAQLPITIDSNGYFVANGDFVEPVGPAFWERTTS 413
>gi|289745468|ref|ZP_06504846.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium
tuberculosis 02_1987]
gi|289685996|gb|EFD53484.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium
tuberculosis 02_1987]
Length=383
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/353 (99%), Positives = 350/353 (99%), Gaps = 0/353 (0%)
Query 77 KEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTT 136
K P PVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTT
Sbjct 31 KSPAGPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTT 90
Query 137 PLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGST 196
PLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGST
Sbjct 91 PLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGST 150
Query 197 IRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG 256
IRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG
Sbjct 151 IRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG 210
Query 257 ETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIR 316
ETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIR
Sbjct 211 ETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIR 270
Query 317 NPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQ 376
NPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQ
Sbjct 271 NPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQ 330
Query 377 SQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
SQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT
Sbjct 331 SQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 383
>gi|183983230|ref|YP_001851521.1| Rieske iron-sulfur protein QcrA [Mycobacterium marinum M]
gi|183176556|gb|ACC41666.1| Rieske iron-sulfur protein QcrA [Mycobacterium marinum M]
Length=394
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/392 (85%), Positives = 363/392 (93%), Gaps = 0/392 (0%)
Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97
DG+ T V REPDEAALA MS QELL LGG +DGVRIA+KEPRWPVEGTKAEKRAER VA
Sbjct 3 DGSTETGVSREPDEAALAEMSQQELLELGGSIDGVRIAHKEPRWPVEGTKAEKRAERGVA 62
Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157
+WLLLGG FGLALLL+FLFWPWE+K + + + +YSL TPLYGLTFG+S+L+IAIGAVL+
Sbjct 63 LWLLLGGFFGLALLLVFLFWPWEYKPSGDKGNLLYSLATPLYGLTFGMSVLAIAIGAVLF 122
Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217
QKRFIPEEI+IQ+RHDGASRE+DRKTVVANL DAFE STI RRK++G S GVG+GAFGLG
Sbjct 123 QKRFIPEEITIQDRHDGASREVDRKTVVANLADAFEASTIGRRKMVGASLGVGLGAFGLG 182
Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277
TLVAFAGGLIKNPWKPVVPTA+GKKAVLWTSGWTPR+ GETIYLARATG DGPP+ KMR
Sbjct 183 TLVAFAGGLIKNPWKPVVPTADGKKAVLWTSGWTPRFHGETIYLARATGLGDGPPYTKMR 242
Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
PED+DAGGMETVFPWRESDGDGTTVESH KLQ I+MG+RNPVMLIRIKP+D+ RVVKR+G
Sbjct 243 PEDLDAGGMETVFPWRESDGDGTTVESHEKLQRISMGVRNPVMLIRIKPTDMHRVVKRQG 302
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFNFGE FAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA
Sbjct 303 QESFNFGELFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 362
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
QLPITIDT+GYLVANGDF+EPVGPAFWERTT+
Sbjct 363 QLPITIDTEGYLVANGDFIEPVGPAFWERTTS 394
>gi|118618837|ref|YP_907169.1| Rieske iron-sulfur protein QcrA [Mycobacterium ulcerans Agy99]
gi|118570947|gb|ABL05698.1| Rieske iron-sulfur protein QcrA [Mycobacterium ulcerans Agy99]
Length=394
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/392 (85%), Positives = 363/392 (93%), Gaps = 0/392 (0%)
Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97
DG+ T V REPDEAALA MS QELL LGG +DGVRIA+KEPRWPVEGTKAEKRAER VA
Sbjct 3 DGSTETGVSREPDEAALAEMSQQELLELGGSIDGVRIAHKEPRWPVEGTKAEKRAERGVA 62
Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157
+WLLLGG FGLALLL+FLFWPWE+K + + + +YSL TPLYGLTFG+S+L+IAIGAVL+
Sbjct 63 LWLLLGGFFGLALLLVFLFWPWEYKPSGDKGNLLYSLATPLYGLTFGMSVLAIAIGAVLF 122
Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217
QKRFIPEEI+IQ+RHDGASRE+DRKTVVANL DAFE STI RRK++G S GVG+GAFGLG
Sbjct 123 QKRFIPEEITIQDRHDGASREVDRKTVVANLADAFEASTIGRRKMVGASLGVGLGAFGLG 182
Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277
TLVAFAGGLIKNPWKPVVPTA+GKKAVLWTSGWTPR+ GETIYLARATG DGPP+ KMR
Sbjct 183 TLVAFAGGLIKNPWKPVVPTADGKKAVLWTSGWTPRFHGETIYLARATGLGDGPPYAKMR 242
Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
PED+DAGGMETVFPWRESDGDGTTVESH KLQ I+MG+RNPVMLIRIKP+D+ RVVKR+G
Sbjct 243 PEDLDAGGMETVFPWRESDGDGTTVESHEKLQRISMGVRNPVMLIRIKPTDMHRVVKRQG 302
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFNFGE FAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA
Sbjct 303 QESFNFGELFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 362
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
QLPITIDT+GYLVANGDF+EPVGPAFWERTT+
Sbjct 363 QLPITIDTEGYLVANGDFIEPVGPAFWERTTS 394
>gi|342859905|ref|ZP_08716558.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA [Mycobacterium
colombiense CECT 3035]
gi|342133037|gb|EGT86257.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA [Mycobacterium
colombiense CECT 3035]
Length=403
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/411 (79%), Positives = 361/411 (88%), Gaps = 9/411 (2%)
Query 19 SDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKE 78
SD++ R G NP + REPD+AALAAMS QEL+ALGGKLDGV +KE
Sbjct 2 SDQDVRGSDTGGNPHGTGE---------REPDDAALAAMSQQELVALGGKLDGVDTVFKE 52
Query 79 PRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPL 138
PRWP+EGTKAEKRAER VA+WLLLGG FGLALLLIFLFWPWE+K + F+Y LTTPL
Sbjct 53 PRWPIEGTKAEKRAERGVALWLLLGGFFGLALLLIFLFWPWEYKPKESAGSFLYDLTTPL 112
Query 139 YGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIR 198
YGLTFG++ILSI IG +LYQKRFIPEEISIQ+RHDGASR++DRKTVVANL DA++GST+
Sbjct 113 YGLTFGMAILSIGIGVILYQKRFIPEEISIQDRHDGASRDVDRKTVVANLADAYQGSTVG 172
Query 199 RRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGET 258
RRKLIGLS G+G+GAFGL TLVAFAGGLIKNPWKPVVPTA+GKKAVLWTSGW+PRY GET
Sbjct 173 RRKLIGLSLGMGLGAFGLSTLVAFAGGLIKNPWKPVVPTADGKKAVLWTSGWSPRYHGET 232
Query 259 IYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNP 318
I+LARATG+ PF+KMRPED+DAGGMETVFPWRESDGDGTT ES KL+ I G+RNP
Sbjct 233 IFLARATGSASTSPFVKMRPEDLDAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNP 292
Query 319 VMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQ 378
VMLIR++P+D+ RVVKR+GQESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQ
Sbjct 293 VMLIRVRPTDMNRVVKRQGQESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQ 352
Query 379 FDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
FDALHFAKPIFGPAARALAQLPITID++GYLVANGDFVEPVGPAFWERTTT
Sbjct 353 FDALHFAKPIFGPAARALAQLPITIDSNGYLVANGDFVEPVGPAFWERTTT 403
>gi|108800259|ref|YP_640456.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
MCS]
gi|119869387|ref|YP_939339.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
KMS]
gi|126435882|ref|YP_001071573.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
JLS]
gi|108770678|gb|ABG09400.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor
[Mycobacterium sp. MCS]
gi|119695476|gb|ABL92549.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor
[Mycobacterium sp. KMS]
gi|126235682|gb|ABN99082.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor
[Mycobacterium sp. JLS]
Length=414
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/415 (77%), Positives = 356/415 (86%), Gaps = 6/415 (1%)
Query 19 SDEEERRIVPGPNPQDGAKDGAKATA---VPREPDEAALAAMSNQELLALGGKLDGVRIA 75
SDE V N DGA G A VP +P +A LAAMS +EL+ LGG+LDGV
Sbjct 2 SDERNEEQVT--NTPDGAPKGTDAPGHGGVPGQPTDAELAAMSREELVELGGRLDGVETV 59
Query 76 YKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLT 135
+KEPRWPV GT+AEKRAERSVA WLL+GGV GLALL++FLFWPWE++ E +F+YSL
Sbjct 60 FKEPRWPVPGTRAEKRAERSVATWLLIGGVSGLALLVVFLFWPWEYQPYGSEGEFLYSLA 119
Query 136 TPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGS 195
TPLYGL FGLSIL+I IGAVLYQKRFIPEEISIQ+RHDGAS EI RKT ANLTDA EGS
Sbjct 120 TPLYGLLFGLSILAIGIGAVLYQKRFIPEEISIQDRHDGASPEIQRKTAAANLTDALEGS 179
Query 196 TIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQ 255
TI+RRK+IG+S GVG+GAFGLGT VAF GGLIKNPWKPVVPTA+G KAVLWTSGWTPR+
Sbjct 180 TIKRRKMIGVSLGVGLGAFGLGTAVAFIGGLIKNPWKPVVPTADGPKAVLWTSGWTPRFT 239
Query 256 GETIYLARATG-TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMG 314
GETI+LARATG T GP F KMRPED+DAGGMETV+PWRESDGDGTTVESHHK+ EI MG
Sbjct 240 GETIFLARATGNTGHGPTFAKMRPEDLDAGGMETVYPWRESDGDGTTVESHHKMTEIIMG 299
Query 315 IRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPC 374
+RNPVMLIR++P ++ +VVKRKGQESFNFGEFFA+TK+CSHLGCPSSLYEQQ++RILCPC
Sbjct 300 VRNPVMLIRLRPEEMTKVVKRKGQESFNFGEFFAYTKICSHLGCPSSLYEQQTHRILCPC 359
Query 375 HQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
HQSQFDALHFAKPIFGPAARALAQLPITID DGYLVANGDF+EPVGPAFWER T+
Sbjct 360 HQSQFDALHFAKPIFGPAARALAQLPITIDQDGYLVANGDFIEPVGPAFWERKTS 414
>gi|120404530|ref|YP_954359.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957348|gb|ABM14353.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor
[Mycobacterium vanbaalenii PYR-1]
Length=402
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/391 (80%), Positives = 341/391 (88%), Gaps = 0/391 (0%)
Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97
D T P +P +A LA MS +ELL LGGKLDGV I YKEPRWPV GTKAEKRAER+VA
Sbjct 12 DAPGQTGAPGQPTDAELAKMSQEELLELGGKLDGVEIVYKEPRWPVPGTKAEKRAERTVA 71
Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157
W LL G GLALLLIFLFWPWE+K E +F+YSLTTPLYGLTFGLS+L+I +GAVL+
Sbjct 72 YWFLLAGFSGLALLLIFLFWPWEYKPFGDEGEFLYSLTTPLYGLTFGLSVLAIGVGAVLF 131
Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217
QK+FIPEEISIQERHDG S E+ RKTV ANL DA +GSTI+RRK+IGLS G+G GAFGLG
Sbjct 132 QKKFIPEEISIQERHDGRSPELHRKTVAANLGDALDGSTIKRRKMIGLSLGIGFGAFGLG 191
Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277
T VAF GGLIKNPWKPVVPTAEG KAVLWTSGWTPR+ GETIYLARATG P++KMR
Sbjct 192 TAVAFIGGLIKNPWKPVVPTAEGPKAVLWTSGWTPRFHGETIYLARATGKPGESPYVKMR 251
Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
PED+DAGGMETV+PWRESDGDGTTVES H L EIAMG+RNPVMLIRIKP+D+ RVVKR+G
Sbjct 252 PEDLDAGGMETVYPWRESDGDGTTVESEHHLFEIAMGVRNPVMLIRIKPADMKRVVKRRG 311
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFNFGE FA+TKVCSHLGCPSSLYEQQ+YRILCPCHQSQFDALHFAKPIFGPAARALA
Sbjct 312 QESFNFGELFAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALHFAKPIFGPAARALA 371
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
QLPITID DGYLVANGDF+EPVGPAFWER +
Sbjct 372 QLPITIDQDGYLVANGDFIEPVGPAFWERKS 402
>gi|118466759|ref|YP_881501.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA [Mycobacterium
avium 104]
gi|254774970|ref|ZP_05216486.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
QcrA [Mycobacterium avium subsp. avium ATCC 25291]
gi|118168046|gb|ABK68943.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
QcrA [Mycobacterium avium 104]
Length=401
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/392 (84%), Positives = 351/392 (90%), Gaps = 0/392 (0%)
Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97
D K P EPDEAALAAMS QEL+ LGGKLDGV +KEPRWPVEGTKAEKRAER VA
Sbjct 10 DTDKGAGAPNEPDEAALAAMSQQELVTLGGKLDGVETVFKEPRWPVEGTKAEKRAERGVA 69
Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157
+WLLLGG FGLALLLIFLFWPWE+K + F+Y L TPLYGLTFG+SILSI IG +LY
Sbjct 70 LWLLLGGGFGLALLLIFLFWPWEYKPKEAAGSFLYDLATPLYGLTFGMSILSIGIGTILY 129
Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217
QKRFIPEEISIQERHDGASREIDRKTVVANL DA+ GSTI RRK++GLS GVG+GAFGL
Sbjct 130 QKRFIPEEISIQERHDGASREIDRKTVVANLADAYNGSTIGRRKMVGLSLGVGLGAFGLS 189
Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277
TLVAFAGGLIKNPWKPVVPTA GKKAVLWTSGWTPRY GETIYLARATGT G PF+KMR
Sbjct 190 TLVAFAGGLIKNPWKPVVPTANGKKAVLWTSGWTPRYPGETIYLARATGTYTGAPFVKMR 249
Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
PED+DAGGMETVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+G
Sbjct 250 PEDLDAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMPRVVKRQG 309
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALA
Sbjct 310 QESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALA 369
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
QLPITIDT+GYLVANGDFVEPVGPAFWERTTT
Sbjct 370 QLPITIDTNGYLVANGDFVEPVGPAFWERTTT 401
>gi|41408032|ref|NP_960868.1| QcrA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396387|gb|AAS04251.1| QcrA [Mycobacterium avium subsp. paratuberculosis K-10]
Length=422
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/392 (83%), Positives = 350/392 (90%), Gaps = 0/392 (0%)
Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97
D K P EPDEAALAAMS QEL+ LGGKLDGV +KEPRWPVE TKAEKRAER VA
Sbjct 31 DTDKGAGAPNEPDEAALAAMSQQELVTLGGKLDGVETVFKEPRWPVEDTKAEKRAERGVA 90
Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157
+WLLLGG FGLALLLIFLFWPWE+K + F+Y L TPLYGLTFG+SILSI IG +LY
Sbjct 91 LWLLLGGGFGLALLLIFLFWPWEYKPKEAAGSFLYDLATPLYGLTFGMSILSIGIGTILY 150
Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217
QKRFIPEEISIQ+RHDGASREIDRKTVVANL DA+ GSTI RRK++GLS GVG+GAFGL
Sbjct 151 QKRFIPEEISIQQRHDGASREIDRKTVVANLADAYNGSTIGRRKMVGLSLGVGLGAFGLS 210
Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277
TLVAFAGGLIKNPWKPVVPTA GKKAVLWTSGWTPRY GETIYLARATGT G PF+KMR
Sbjct 211 TLVAFAGGLIKNPWKPVVPTANGKKAVLWTSGWTPRYPGETIYLARATGTYTGAPFVKMR 270
Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
PED+DAGGMETVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+G
Sbjct 271 PEDLDAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMPRVVKRQG 330
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALA
Sbjct 331 QESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALA 390
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
QLPITIDT+GYLVANGDFVEPVGPAFWERTTT
Sbjct 391 QLPITIDTNGYLVANGDFVEPVGPAFWERTTT 422
>gi|336461918|gb|EGO40771.1| Rieske Fe-S protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=401
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/392 (83%), Positives = 350/392 (90%), Gaps = 0/392 (0%)
Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97
D K P EPDEAALAAMS QEL+ LGGKLDGV +KEPRWPVE TKAEKRAER VA
Sbjct 10 DTDKGAGAPNEPDEAALAAMSQQELVTLGGKLDGVETVFKEPRWPVEDTKAEKRAERGVA 69
Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157
+WLLLGG FGLALLLIFLFWPWE+K + F+Y L TPLYGLTFG+SILSI IG +LY
Sbjct 70 LWLLLGGGFGLALLLIFLFWPWEYKPKEAAGSFLYDLATPLYGLTFGMSILSIGIGTILY 129
Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217
QKRFIPEEISIQ+RHDGASREIDRKTVVANL DA+ GSTI RRK++GLS GVG+GAFGL
Sbjct 130 QKRFIPEEISIQQRHDGASREIDRKTVVANLADAYNGSTIGRRKMVGLSLGVGLGAFGLS 189
Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277
TLVAFAGGLIKNPWKPVVPTA GKKAVLWTSGWTPRY GETIYLARATGT G PF+KMR
Sbjct 190 TLVAFAGGLIKNPWKPVVPTANGKKAVLWTSGWTPRYPGETIYLARATGTYTGAPFVKMR 249
Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
PED++AGGMETVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+G
Sbjct 250 PEDLEAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMPRVVKRQG 309
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALA
Sbjct 310 QESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALA 369
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429
QLPITIDT+GYLVANGDFVEPVGPAFWERTTT
Sbjct 370 QLPITIDTNGYLVANGDFVEPVGPAFWERTTT 401
>gi|145223541|ref|YP_001134219.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|315443887|ref|YP_004076766.1| Rieske Fe-S protein [Mycobacterium sp. Spyr1]
gi|145216027|gb|ABP45431.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor
[Mycobacterium gilvum PYR-GCK]
gi|315262190|gb|ADT98931.1| Rieske Fe-S protein [Mycobacterium sp. Spyr1]
Length=406
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/403 (76%), Positives = 345/403 (86%), Gaps = 3/403 (0%)
Query 29 GPNPQDGAKDGAKA---TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEG 85
GP+ ++G + G P +P +A LA MS +ELL LGG+LDGV I +KEPRWP+ G
Sbjct 4 GPDDRNGPEKGTDVPGHKGEPGQPTDAELAKMSQEELLELGGRLDGVEIVHKEPRWPIPG 63
Query 86 TKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGL 145
TKAEKRAER+VA W LL G GLALLLIFLFWPWE+K +F+YSLTTPLYGLTFGL
Sbjct 64 TKAEKRAERTVAYWFLLAGFSGLALLLIFLFWPWEYKPYGSGGEFLYSLTTPLYGLTFGL 123
Query 146 SILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGL 205
S+L+I +GAVL+QK+FIPEEISIQ+RHDG S E+ RKT+ ANL DA +GSTI+RRK+IGL
Sbjct 124 SVLAIGVGAVLFQKKFIPEEISIQDRHDGRSPELHRKTIAANLGDALDGSTIKRRKMIGL 183
Query 206 SFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARAT 265
S G+G GAFGLGT VAF GGLIKNPWKPVVPTAEG KAVLWTSGWTPR++GETI+LARAT
Sbjct 184 SLGIGFGAFGLGTAVAFIGGLIKNPWKPVVPTAEGMKAVLWTSGWTPRFEGETIFLARAT 243
Query 266 GTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIK 325
G PF+KMRPED+DAGGMETV+PWRESDGDGTTVES H L +I MG+RNPVMLIRIK
Sbjct 244 GRPGNSPFVKMRPEDLDAGGMETVYPWRESDGDGTTVESEHHLYDIVMGVRNPVMLIRIK 303
Query 326 PSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFA 385
P D+ RVVKR+GQESFNFGE FA+TKVCSHLGCPSSLYEQQ+YRILCPCHQSQFDALHFA
Sbjct 304 PGDMSRVVKRRGQESFNFGELFAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALHFA 363
Query 386 KPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
KPIFGPAARALAQLPITID DGYLVANGDF+EPVGPAFWER +
Sbjct 364 KPIFGPAARALAQLPITIDQDGYLVANGDFIEPVGPAFWERKS 406
>gi|333990348|ref|YP_004522962.1| Rieske iron-sulfur protein QcrA [Mycobacterium sp. JDM601]
gi|333486316|gb|AEF35708.1| Rieske iron-sulfur protein QcrA [Mycobacterium sp. JDM601]
Length=390
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/388 (79%), Positives = 339/388 (88%), Gaps = 3/388 (0%)
Query 41 KATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWL 100
K TA+P D A LAAM+ +ELLALGG++DGV +KEPRWPVEGT+AEKRAERSVA W
Sbjct 6 KDTAIP---DGAELAAMNTEELLALGGRIDGVETIFKEPRWPVEGTRAEKRAERSVAGWF 62
Query 101 LLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKR 160
L G FGLALLLIF+FWPWE+ + D F YSL TPLYGLTFGLS+L + IGAV++ K+
Sbjct 63 LAAGGFGLALLLIFVFWPWEYASVDSAGGFAYSLATPLYGLTFGLSVLLLGIGAVMFVKK 122
Query 161 FIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLV 220
FIPEEI+IQERHDG+S E+DRKTV A LTDAFEGSTI RRKL+G S G+G GAFGLGTLV
Sbjct 123 FIPEEITIQERHDGSSAELDRKTVAAQLTDAFEGSTIGRRKLLGASLGIGFGAFGLGTLV 182
Query 221 AFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPED 280
A AGGLIKNPWKPVV TAEGKKA+LWTSGWTPRY GETIYLARATG PFIKMRPED
Sbjct 183 AGAGGLIKNPWKPVVDTAEGKKAMLWTSGWTPRYHGETIYLARATGHSTNSPFIKMRPED 242
Query 281 MDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQES 340
+DAGGMETVFPWRESDGDGTT ES KL EI MG+RNPVMLIRI+P D+ VVKRKGQES
Sbjct 243 LDAGGMETVFPWRESDGDGTTEESREKLTEIMMGVRNPVMLIRIRPDDMPNVVKRKGQES 302
Query 341 FNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLP 400
FNFG+FFA+TK+CSHLGCPSSL+EQQ+YRILCPCHQSQFDALHFAKP+FGPAARALAQLP
Sbjct 303 FNFGDFFAYTKICSHLGCPSSLFEQQTYRILCPCHQSQFDALHFAKPVFGPAARALAQLP 362
Query 401 ITIDTDGYLVANGDFVEPVGPAFWERTT 428
ITIDT+GYLVANGDFVEPVGPAFWERT+
Sbjct 363 ITIDTNGYLVANGDFVEPVGPAFWERTS 390
>gi|15827403|ref|NP_301666.1| Rieske iron-sulphur reductase component [Mycobacterium leprae
TN]
gi|221229880|ref|YP_002503296.1| putative Rieske iron-sulphur reductase component [Mycobacterium
leprae Br4923]
gi|13092953|emb|CAC31261.1| putative Rieske iron-sulphur reductase component [Mycobacterium
leprae]
gi|219932987|emb|CAR70975.1| putative Rieske iron-sulphur reductase component [Mycobacterium
leprae Br4923]
Length=394
Score = 633 bits (1633), Expect = 2e-179, Method: Compositional matrix adjust.
Identities = 320/398 (81%), Positives = 343/398 (87%), Gaps = 7/398 (1%)
Query 31 NPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEK 90
NP+DGA RE DE MS +EL+ALGG+LDGV YKE RWP+EGTKAEK
Sbjct 4 NPKDGA-------GASRELDETTQGTMSREELVALGGRLDGVNTVYKEQRWPIEGTKAEK 56
Query 91 RAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSI 150
R ER V WLLLGGV GL LLLIFLFWPWE+K + F+Y++ TPLYGLTFGLSIL+I
Sbjct 57 RTERMVTFWLLLGGVLGLTLLLIFLFWPWEYKPKEASGSFLYTIATPLYGLTFGLSILAI 116
Query 151 AIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVG 210
AIGAV +QKRFIPEEISIQERHDGAS EIDRKTVVANLTDA E STIRRRKLIGLS GVG
Sbjct 117 AIGAVQFQKRFIPEEISIQERHDGASPEIDRKTVVANLTDALESSTIRRRKLIGLSLGVG 176
Query 211 MGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDG 270
+GAFGL TLV F GG IKNPWKPVVPTA G KA+LWTSGWTPRY GETIYLARATG+ G
Sbjct 177 LGAFGLSTLVTFIGGFIKNPWKPVVPTANGMKAMLWTSGWTPRYHGETIYLARATGSHSG 236
Query 271 PPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLG 330
PFI+MRPED+DAGGMETVFPWRESDGDGTT+ESH KL I MGIRNPVMLIRI+PSD+
Sbjct 237 APFIRMRPEDVDAGGMETVFPWRESDGDGTTMESHEKLITIKMGIRNPVMLIRIRPSDMP 296
Query 331 RVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFG 390
RVVKR+GQE+FNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDAL +AKPIFG
Sbjct 297 RVVKRRGQENFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALQYAKPIFG 356
Query 391 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT
Sbjct 357 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 394
>gi|118473759|ref|YP_888539.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118175046|gb|ABK75942.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium
smegmatis str. MC2 155]
Length=408
Score = 631 bits (1627), Expect = 8e-179, Method: Compositional matrix adjust.
Identities = 312/398 (79%), Positives = 347/398 (88%), Gaps = 0/398 (0%)
Query 31 NPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEK 90
+P D T VP +P +A LA MS +EL+ LGGK+DGV +KEPRWPV GTKAEK
Sbjct 11 SPDIKGTDAPGQTGVPGQPTDAELAEMSREELVKLGGKIDGVETIFKEPRWPVPGTKAEK 70
Query 91 RAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSI 150
R ER VA WL+LGG+ GLALLL+FLFWPWE++ E +F+YSL TPLYGLTFGLSILSI
Sbjct 71 RTERLVAYWLMLGGLSGLALLLVFLFWPWEYQPFGSEGEFLYSLATPLYGLTFGLSILSI 130
Query 151 AIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVG 210
IGAVL+QK+FIPEEIS+Q+RHDG S E+ RKTV ANLTDA EGST++RRK+IGLS G+G
Sbjct 131 GIGAVLFQKKFIPEEISVQDRHDGRSPEVHRKTVAANLTDALEGSTLKRRKVIGLSLGIG 190
Query 211 MGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDG 270
+GAFG GTLVAF GGLIKNPWKPVVPTAEGKKAVLWTSGWTPR++GETIYLARATG
Sbjct 191 LGAFGAGTLVAFIGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRFKGETIYLARATGRPGE 250
Query 271 PPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLG 330
PF+KMRPED+DAGGMETVFPWRESDGDGTTVES HKL EIAMG+RNPVMLIRIKP+D+
Sbjct 251 SPFVKMRPEDIDAGGMETVFPWRESDGDGTTVESEHKLTEIAMGVRNPVMLIRIKPADMH 310
Query 331 RVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFG 390
RV+KRKGQESFNFGE FA+TKVCSHLGCPSSLYEQQ+YRILCPCHQSQFDAL FAKPIFG
Sbjct 311 RVIKRKGQESFNFGELFAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALEFAKPIFG 370
Query 391 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
PAARALAQLPITID DGYLVANGDFVEPVGPAFWER +
Sbjct 371 PAARALAQLPITIDEDGYLVANGDFVEPVGPAFWERKS 408
>gi|254822833|ref|ZP_05227834.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
QcrA [Mycobacterium intracellulare ATCC 13950]
Length=414
Score = 625 bits (1612), Expect = 4e-177, Method: Compositional matrix adjust.
Identities = 311/384 (81%), Positives = 343/384 (90%), Gaps = 1/384 (0%)
Query 47 REPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVF 106
REPD+AALAAMS QEL+ALGGKLDGV +KE RWPVEGTKAEKRAER VA+WLLLGG
Sbjct 31 REPDDAALAAMSQQELVALGGKLDGVETVFKENRWPVEGTKAEKRAERGVALWLLLGGGG 90
Query 107 GLALLL-IFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEE 165
LL IFLFWPWE+K + ++YSLTTPLYGLTFG+SILSI IG +LYQKRFIPEE
Sbjct 91 FGLALLLIFLFWPWEYKPKEAADSWLYSLTTPLYGLTFGMSILSIGIGTILYQKRFIPEE 150
Query 166 ISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGG 225
ISIQ+RHDGASR++DRKTVVANL DA+ GSTI RRKL+GLS GVG+GAFGL TLVAFAGG
Sbjct 151 ISIQDRHDGASRDVDRKTVVANLADAYSGSTIGRRKLVGLSLGVGLGAFGLSTLVAFAGG 210
Query 226 LIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGG 285
LIKNPWKPVV TA GKKAVL+TS WTPRY GETIYLARATG+ G PF+KMRPED+DAGG
Sbjct 211 LIKNPWKPVVQTANGKKAVLFTSDWTPRYHGETIYLARATGSFAGSPFVKMRPEDIDAGG 270
Query 286 METVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGE 345
METVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+GQESFNFGE
Sbjct 271 METVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMHRVVKRQGQESFNFGE 330
Query 346 FFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 405
FA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT
Sbjct 331 LFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 390
Query 406 DGYLVANGDFVEPVGPAFWERTTT 429
+GYLVANGDF+EPVGPAFWERTT+
Sbjct 391 NGYLVANGDFIEPVGPAFWERTTS 414
>gi|296166063|ref|ZP_06848510.1| probable ubiquinol-cytochrome c reductase, iron-sulfur subunit
QcrA [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898584|gb|EFG78143.1| probable ubiquinol-cytochrome c reductase, iron-sulfur subunit
QcrA [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=400
Score = 622 bits (1603), Expect = 4e-176, Method: Compositional matrix adjust.
Identities = 320/382 (84%), Positives = 348/382 (92%), Gaps = 0/382 (0%)
Query 48 EPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFG 107
EPDEAALAAMS QEL+ALGGKLDGV KEPRWPVEGTKAEKRAER VA+WLLLGG FG
Sbjct 19 EPDEAALAAMSQQELVALGGKLDGVETIVKEPRWPVEGTKAEKRAERGVALWLLLGGGFG 78
Query 108 LALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEIS 167
LALLLIFLFWPWE+K +Y LTTPLYGLTFG+SILSIA+G +LYQKRFIPEEIS
Sbjct 79 LALLLIFLFWPWEYKPKAAPGSLLYDLTTPLYGLTFGMSILSIAVGTILYQKRFIPEEIS 138
Query 168 IQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLI 227
IQERHDGASREIDRKTVVANLTDA +GST+RRRK+IG+S G+G+GAFGL TLVAFAGGLI
Sbjct 139 IQERHDGASREIDRKTVVANLTDALDGSTVRRRKVIGMSLGLGLGAFGLSTLVAFAGGLI 198
Query 228 KNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGME 287
KNPWKPVVPTA GKKAVLWTSGWTPRY GETI+LARATG+ PFIKMRPED+DAGGME
Sbjct 199 KNPWKPVVPTANGKKAVLWTSGWTPRYAGETIFLARATGSAGASPFIKMRPEDLDAGGME 258
Query 288 TVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFF 347
TVFPWRESDGDGTT ES KL+ I G+RNPVMLIR++PSD+ RVVKR+GQESFNFGE F
Sbjct 259 TVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRVRPSDMPRVVKRQGQESFNFGELF 318
Query 348 AFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDG 407
A+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT+G
Sbjct 319 AYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTNG 378
Query 408 YLVANGDFVEPVGPAFWERTTT 429
YLVANGDF+EPVGPAFWERTT+
Sbjct 379 YLVANGDFIEPVGPAFWERTTS 400
>gi|169629054|ref|YP_001702703.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium
abscessus ATCC 19977]
gi|169241021|emb|CAM62049.1| Probable ubiquinol-cytochrome c reductase iron-sulfur subunit
(Rieske iron-sulfur protein) [Mycobacterium abscessus]
Length=391
Score = 581 bits (1498), Expect = 8e-164, Method: Compositional matrix adjust.
Identities = 275/384 (72%), Positives = 318/384 (83%), Gaps = 2/384 (0%)
Query 46 PREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGV 105
P P + LAAMS EL+ LG LDGV I Y+EPRWPVEGTKAEKRAER VA+W LGGV
Sbjct 9 PEIPSDEQLAAMSRDELVKLGTNLDGVEIVYREPRWPVEGTKAEKRAERLVALWFALGGV 68
Query 106 FGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEE 165
FGLALL +FLFWPWE+K + +Y+L TPLYGLT GLS+LS+ IGAVLY K+FIP+E
Sbjct 69 FGLALLGVFLFWPWEYKPFGDPGNALYNLATPLYGLTLGLSVLSLGIGAVLYTKKFIPQE 128
Query 166 ISIQERHDG-ASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAG 224
ISIQ+RHDG S E+DRKT+VA L D + ST+ RRK+I + G G+GA G GT VAF G
Sbjct 129 ISIQDRHDGPGSAEVDRKTIVAQLQDTLDTSTLPRRKMIVRALGFGVGAMGAGTAVAFIG 188
Query 225 GLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAG 284
G+IKNPW VVPTA GK+ VL TSGWTPRY GETIYL RA G+ +K+RPED+DAG
Sbjct 189 GMIKNPWARVVPTANGKQPVLLTSGWTPRYHGETIYLGRAVGSSSNV-LLKIRPEDIDAG 247
Query 285 GMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFG 344
GMETVFPWRESDGDGTTVESH KL I MGIRNPVMLIR++P+D+ +VVKRKGQE+FN+G
Sbjct 248 GMETVFPWRESDGDGTTVESHEKLSHIQMGIRNPVMLIRVRPTDMPKVVKRKGQENFNYG 307
Query 345 EFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITID 404
+ FA+TK+CSHLGCP+SL+EQQ+YRILCPCHQSQFDALHFAKPIFGPAARALAQLP+T+D
Sbjct 308 DLFAYTKICSHLGCPTSLFEQQTYRILCPCHQSQFDALHFAKPIFGPAARALAQLPLTVD 367
Query 405 TDGYLVANGDFVEPVGPAFWERTT 428
DGYLVANGDFVEPVGPAFWER +
Sbjct 368 KDGYLVANGDFVEPVGPAFWERKS 391
>gi|343924167|ref|ZP_08763730.1| menaquinol-cytochrome c reductase iron-sulfur protein [Gordonia
alkanivorans NBRC 16433]
gi|343765972|dbj|GAA10656.1| menaquinol-cytochrome c reductase iron-sulfur protein [Gordonia
alkanivorans NBRC 16433]
Length=385
Score = 454 bits (1169), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 227/385 (59%), Positives = 272/385 (71%), Gaps = 13/385 (3%)
Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108
P L MS +EL+ LG LDGV I ++ R+P GTK EKRAER VA+W + G+ L
Sbjct 9 PSRDELEQMSTEELVKLGTNLDGVEIIHRAERYPEPGTKVEKRAERQVAIWFTIAGISAL 68
Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168
A L IFLF WEF D + + Y+ TPL G TFGLS+L+I I +L K+FIP EIS+
Sbjct 69 ACLGIFLFNHWEFALPDDPNYWWYTFNTPLLGATFGLSVLAIGIAMILITKKFIPSEISV 128
Query 169 QERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIK 228
Q+RHDG S EID+KT+V L D ST+ RRK++ S G G+GAF L LVAF GG IK
Sbjct 129 QDRHDGGSAEIDKKTIVGLLQDTGTTSTLGRRKMLIGSAGFGLGAFALTGLVAFLGGFIK 188
Query 229 NPWKPVVPTAEGKKAVLWTSGWTPRYQ-----GETIYLARATGTEDGPPFIKMRPEDMDA 283
NPW AE + + LW SGW+P Y ETIYL R TG + RPED+DA
Sbjct 189 NPW------AERENSPLWHSGWSPIYNSKADPNETIYLRRDTGNPYQVALV--RPEDLDA 240
Query 284 GGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNF 343
GGMETVFPWR S+G G T S H L E +RNPVMLIR++P D R +KR+GQESFN+
Sbjct 241 GGMETVFPWRRSNGFGETEHSRHALMESLHEVRNPVMLIRLRPEDAARAIKRQGQESFNY 300
Query 344 GEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITI 403
G++FAFTKVCSHLGCP+SLYEQ+S RILCPCHQSQFDAL +AKPIFGPAARALAQLPIT+
Sbjct 301 GDYFAFTKVCSHLGCPASLYEQRSNRILCPCHQSQFDALEYAKPIFGPAARALAQLPITV 360
Query 404 DTDGYLVANGDFVEPVGPAFWERTT 428
+ +GYLVA GDF+EPVGPAFWER +
Sbjct 361 NNEGYLVAAGDFIEPVGPAFWERKS 385
>gi|54023696|ref|YP_117938.1| putative cytochrome c component [Nocardia farcinica IFM 10152]
gi|54015204|dbj|BAD56574.1| putative cytochrome c component [Nocardia farcinica IFM 10152]
Length=394
Score = 451 bits (1161), Expect = 8e-125, Method: Compositional matrix adjust.
Identities = 222/409 (55%), Positives = 290/409 (71%), Gaps = 18/409 (4%)
Query 21 EEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPR 80
E+ER + P +G + K P +P E L AM+ EL+ LG DGV + Y+ R
Sbjct 3 EQERDV---SRPDEGPELSKKPVNPPVDPTEDELDAMTRDELVELGTARDGVEVVYRGER 59
Query 81 WPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYG 140
+PV GT+AEKRAER V W + G+ AL+ +FLFWPWEFK + + YSL TPL G
Sbjct 60 FPVPGTRAEKRAERQVTFWFAVSGLAAAALIGVFLFWPWEFKGKNEDGHAAYSLFTPLVG 119
Query 141 LTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRR 200
LTFG+++L I I VL +K+FIP EISIQERHDG S E++R+T+ A L DA + ST+ RR
Sbjct 120 LTFGIAVLVIGIAVVLIRKKFIPAEISIQERHDGPSPEVERRTLAAELQDALDTSTLGRR 179
Query 201 KLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIY 260
K+I + G G+G G+G L+ F GG++KNPW A+ +K+ LW SGWTP ++GET+Y
Sbjct 180 KMITRTAGAGVGVLGIGALLVFVGGMVKNPW------AKREKSPLWVSGWTPDFEGETVY 233
Query 261 LARATGTEDGPPFIKMRPEDMDAGGMETVFPWRES-DGDGTTVESHHKLQEIAMGIRNPV 319
L R TG + + +RPED+DAG METVFPW+E GD SH LQ + GIRN V
Sbjct 234 LRRDTGRPED--IVLVRPEDLDAGAMETVFPWKEKWRGD-----SHATLQSL-RGIRNAV 285
Query 320 MLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQF 379
MLIR++ D + +KRKGQESFNFG++FA++K+C+HLGCP+SLYEQQ+ RILCPCHQSQF
Sbjct 286 MLIRLRTEDAEKAIKRKGQESFNFGDYFAYSKICTHLGCPTSLYEQQTNRILCPCHQSQF 345
Query 380 DALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
A + KPIFGPAARAL QLPIT++++G+LVANGDF+EP+GPAFWER +
Sbjct 346 SATEWGKPIFGPAARALPQLPITVNSEGFLVANGDFIEPLGPAFWERRS 394
>gi|296393479|ref|YP_003658363.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296180626|gb|ADG97532.1| Rieske (2Fe-2S) iron-sulfur domain protein [Segniliparus rotundus
DSM 44985]
Length=384
Score = 449 bits (1156), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 224/384 (59%), Positives = 282/384 (74%), Gaps = 11/384 (2%)
Query 48 EPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFG 107
+P L+ MS EL+ LG DGVR+ +++ RW V GT+AEKRAER VA WL+LGG+
Sbjct 9 DPTPEELSTMSRDELVTLGLAQDGVRLIHRQERWAVPGTRAEKRAERLVAFWLILGGLAA 68
Query 108 LALLLIFLFWPWEFKAADGESDF-IYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEI 166
+ALL +FLF WE+ A GES + Y+ TPL GLT G+SIL+I + A++Y KRFIPEEI
Sbjct 69 IALLAVFLFGHWEY-AGPGESGYWAYTWETPLIGLTMGVSILAIGVAAIVYTKRFIPEEI 127
Query 167 SIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGL 226
++Q+RHDG S+ +D+ T A L D+ E ST+ RR +I + FG V F GG
Sbjct 128 AVQDRHDGGSKPLDKLTFGALLNDSLETSTLPRRTMIKRALIFSASVFGAAAGVFFIGGA 187
Query 227 IKNPWKPVVPTAEGKKAVLWTSGWTPRY--QGETIYLARATGTEDGPPFIKMRPEDMDAG 284
I+NPW A+G + LW +GWTPR + ETIYL R T +D ++PED+ +G
Sbjct 188 IRNPW------AKGNDSDLWHTGWTPRKGEEHETIYLRRYT-PQDIYSVELVKPEDLASG 240
Query 285 GMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFG 344
GMETVFPWRESDG G T ES +L E GIRNPVMLIR++P D RVVKRKGQE+FNFG
Sbjct 241 GMETVFPWRESDGKGETEESRERLFESFHGIRNPVMLIRLRPEDAARVVKRKGQENFNFG 300
Query 345 EFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITID 404
E++A+TKVCSH+GCP+SLYEQQ+ RILCPCHQSQFDALH+AKPIFGPAARALAQLPIT++
Sbjct 301 EYYAYTKVCSHVGCPTSLYEQQTNRILCPCHQSQFDALHYAKPIFGPAARALAQLPITVN 360
Query 405 TDGYLVANGDFVEPVGPAFWERTT 428
+GYL+ANGD++EPVGPAFWER +
Sbjct 361 EEGYLIANGDYIEPVGPAFWERKS 384
>gi|111018145|ref|YP_701117.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus
jostii RHA1]
gi|110817675|gb|ABG92959.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
[Rhodococcus jostii RHA1]
Length=380
Score = 447 bits (1150), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 222/389 (58%), Positives = 279/389 (72%), Gaps = 16/389 (4%)
Query 39 GAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAV 98
G A P++ +A L +S EL+ LG LD V +A++ RW V GTKAEKRAERSVA
Sbjct 5 GQPGGATPKKYTDAELENLSRDELVELGTNLDHVDVAFRRNRWAVPGTKAEKRAERSVAF 64
Query 99 WLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQ 158
W L G+ +A + I+LFWPWE+ A E YSL TPL GLT GL+IL + +GAV +
Sbjct 65 WFALSGISAIAFIAIYLFWPWEYAGAGEEHYSAYSLYTPLIGLTMGLAILGLGVGAVQFT 124
Query 159 KRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGT 218
K+FIPEE+SIQ+RHDG S E+DRKT+VA L D+F+ ST+ RRKL+ + G GA G+ +
Sbjct 125 KKFIPEEVSIQDRHDGGSSEVDRKTIVAELGDSFDTSTLGRRKLLKRTLIFGGGALGIMS 184
Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRP 278
++ GGLIKNPW A+ + LW SGWTPRY+GETIYL R TG + + +RP
Sbjct 185 VMPL-GGLIKNPW------AKRDDSPLWVSGWTPRYEGETIYLRRDTGRPED--VVLVRP 235
Query 279 EDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
ED+DAG METVFP+RESD GD H L E GIRN MLIR++ D RV KRKG
Sbjct 236 EDLDAGAMETVFPFRESDRGD------HDALLEALRGIRNATMLIRLRTEDTARVTKRKG 289
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFN+G++FAF+K+C+HLGCP+SLYEQQ+ RILCPCHQSQFDAL + KPIFGPAARAL
Sbjct 290 QESFNYGDYFAFSKICTHLGCPTSLYEQQTNRILCPCHQSQFDALTYGKPIFGPAARALP 349
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWER 426
QLPIT++ +G+LV GD++E +GPAFWER
Sbjct 350 QLPITVNEEGFLVTTGDYIEALGPAFWER 378
>gi|226307084|ref|YP_002767044.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus
erythropolis PR4]
gi|226186201|dbj|BAH34305.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus
erythropolis PR4]
Length=380
Score = 447 bits (1150), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 224/389 (58%), Positives = 277/389 (72%), Gaps = 16/389 (4%)
Query 39 GAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAV 98
G P++ + L AMS +L+ LG LDGV + Y+ RW V+GT+AEKRAER+VA
Sbjct 5 GQHGGDTPKKYTDEELDAMSRDDLVKLGTNLDGVDVVYRRDRWSVKGTRAEKRAERNVAF 64
Query 99 WLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQ 158
W L GV +A + I+LFWPWE+ A E+ YSL TPL GLT GL+IL + IGAV +
Sbjct 65 WFGLAGVSAIAFIAIYLFWPWEYAGAGDENYGKYSLYTPLIGLTMGLAILGVGIGAVQFT 124
Query 159 KRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGT 218
K+FIPEE+SIQ+RHDG S E+DR+T+VA L D + ST+ RRK I S G GA G+
Sbjct 125 KKFIPEEVSIQDRHDGGSTEVDRRTIVAELGDTLDTSTLPRRKAIKRSLMFGGGALGV-M 183
Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRP 278
+V GGLIKNPW A+G + LW SGWTP Y GETIYL R TG + + +RP
Sbjct 184 MVMPLGGLIKNPW------AKGDDSPLWVSGWTPNYPGETIYLRRDTGRPE--DIVLVRP 235
Query 279 EDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
ED+DAG METVFP+RESD GD H L GIRN VMLIR++ D RV KRKG
Sbjct 236 EDLDAGSMETVFPFRESDRGD------EHALLAALRGIRNSVMLIRLRTEDTARVTKRKG 289
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFN+G++FA++K+C+HLGCP+SLYEQQS RILCPCHQSQFDAL + KPIFGPAARAL
Sbjct 290 QESFNYGDYFAYSKICTHLGCPTSLYEQQSNRILCPCHQSQFDALTYGKPIFGPAARALP 349
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWER 426
QLPIT++ +G+LVA+GDF+E +GPAFWER
Sbjct 350 QLPITVNEEGFLVADGDFIEALGPAFWER 378
>gi|312140188|ref|YP_004007524.1| ubiquinol-cytochrome c reductase peta [Rhodococcus equi 103S]
gi|325676930|ref|ZP_08156602.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus
equi ATCC 33707]
gi|311889527|emb|CBH48844.1| ubiquinol-cytochrome c reductase PetA [Rhodococcus equi 103S]
gi|325552230|gb|EGD21920.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus
equi ATCC 33707]
Length=378
Score = 444 bits (1143), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 216/382 (57%), Positives = 281/382 (74%), Gaps = 14/382 (3%)
Query 45 VPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGG 104
P++ + L MS +L+ LG LDGV +A+++ RW V+GTKAEKRAERSVA W +L G
Sbjct 9 TPKKYTDDELDRMSRDDLVKLGTNLDGVDVAFRKDRWAVKGTKAEKRAERSVAFWFILAG 68
Query 105 VFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPE 164
V +A + IFLFWPWE+ ++ Y+L TPL GLT GL+IL + +GAV + K+F+PE
Sbjct 69 VSAIAFIAIFLFWPWEYAGPGEDTYSAYNLYTPLIGLTMGLAILGVGVGAVKFTKKFVPE 128
Query 165 EISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAG 224
E+SIQ+RHDG S E+D++T+VA L D + STI RRK+I S G GA G+ +++ G
Sbjct 129 EVSIQDRHDGGSAEVDKRTLVAQLGDTLDSSTIGRRKMIKRSLIFGGGAIGVMSVMPL-G 187
Query 225 GLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAG 284
G+IKNPW A+G + LW SGWTPRY+GETIYL R TG + +RPED+DAG
Sbjct 188 GMIKNPW------AKGDDSPLWVSGWTPRYEGETIYLRRDTGRPH--DIVLVRPEDLDAG 239
Query 285 GMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFG 344
METVFP+RES+ G E L+ GIRN VMLIR++ D +V+KRKGQESFN+G
Sbjct 240 AMETVFPFRESE-RGNDEELFKALR----GIRNSVMLIRLRTEDTQKVIKRKGQESFNYG 294
Query 345 EFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITID 404
++FA++K+C+HLGCP+SLYEQQ+ RILCPCHQSQFDAL + KP+FGPAARAL QLPIT++
Sbjct 295 DYFAYSKICTHLGCPTSLYEQQTNRILCPCHQSQFDALQYGKPLFGPAARALPQLPITVN 354
Query 405 TDGYLVANGDFVEPVGPAFWER 426
+GYLVANGDF+E +GPAFWER
Sbjct 355 EEGYLVANGDFIEALGPAFWER 376
>gi|226360274|ref|YP_002778052.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus
opacus B4]
gi|226238759|dbj|BAH49107.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus
opacus B4]
Length=380
Score = 444 bits (1142), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 221/389 (57%), Positives = 278/389 (72%), Gaps = 16/389 (4%)
Query 39 GAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAV 98
G A P++ +A L +S EL+ LG LD V +A++ RW V GTKAEKRAERSVA
Sbjct 5 GQPGGATPKKYTDAELENLSRDELVELGTNLDHVDVAFRRNRWAVPGTKAEKRAERSVAF 64
Query 99 WLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQ 158
W L G+ +A + I+LFWPWE+ A E YSL TPL GLT GL+IL + +GAV +
Sbjct 65 WFALSGISAIAFIAIYLFWPWEYAGAGEEHYSAYSLYTPLIGLTMGLAILGLGVGAVQFT 124
Query 159 KRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGT 218
K+FIPEE+SIQ+RHDG S E+DRKT+VA L D+F+ ST+ RRKL+ + G GA G+ +
Sbjct 125 KKFIPEEVSIQDRHDGGSSEVDRKTIVAELGDSFDTSTLGRRKLLKRTLIFGGGALGIMS 184
Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRP 278
++ GGLIKNPW A+ + LW SGWTPRY+GETIYL R TG + + +RP
Sbjct 185 VMPL-GGLIKNPW------AKRDDSPLWVSGWTPRYEGETIYLRRDTGRPED--VVLVRP 235
Query 279 EDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337
ED+DAG METVFP+RESD GD H L E GIRN MLIR++ D V KRKG
Sbjct 236 EDLDAGAMETVFPFRESDRGD------HDALLEGLRGIRNATMLIRLRTEDAANVTKRKG 289
Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397
QESFN+G++FAF+K+C+HLGCP+SLYEQQ+ RILCPCHQSQFDAL + KPIFGPAARAL
Sbjct 290 QESFNYGDYFAFSKICTHLGCPTSLYEQQTNRILCPCHQSQFDALTYGKPIFGPAARALP 349
Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWER 426
QLPIT++ +G+LV GD++E +GPAFWER
Sbjct 350 QLPITVNEEGFLVTTGDYIEALGPAFWER 378
>gi|296140390|ref|YP_003647633.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Tsukamurella
paurometabola DSM 20162]
gi|296028524|gb|ADG79294.1| Rieske (2Fe-2S) iron-sulfur domain protein [Tsukamurella paurometabola
DSM 20162]
Length=399
Score = 443 bits (1139), Expect = 3e-122, Method: Compositional matrix adjust.
Identities = 220/392 (57%), Positives = 277/392 (71%), Gaps = 22/392 (5%)
Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108
P + L +S+ EL+ LG LDGV + Y+EPRWP GT+AEKRAER+VA+W L GVF L
Sbjct 16 PSDDELDNLSHDELVKLGTNLDGVELVYREPRWPESGTRAEKRAERTVALWFFLAGVFAL 75
Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168
A L FLFWPWE+K D + + Y+L TP G+T GLS+LS+ IGAVL+ K+FIPEEI++
Sbjct 76 AFLGTFLFWPWEYKGVDDDGYWWYTLYTPALGVTAGLSLLSVFIGAVLFTKKFIPEEIAV 135
Query 169 QERHD-GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLI 227
Q+RHD G S ++D+ T A DA + ST+ RRK+I S G G+G GL F GGLI
Sbjct 136 QQRHDAGGSAKVDKLTTGALFKDALDTSTLPRRKMILASAGFGVGVLGLAAAAGFLGGLI 195
Query 228 KNPWKPVVPTAEGKKAVLWTSGWTPRYQG-----------ETIYLARATGTEDGPPFIKM 276
KNPW A+ + + LW +GW+P + ET++L G P +K+
Sbjct 196 KNPW------AKREASPLWHTGWSPYWDSYKNDFSNELNTETVFLRNDVGD---PYKVKL 246
Query 277 -RPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKR 335
RPEDMDAGGM TVFPWR SDG G T ES KL GIRNPVMLIR++P D R +KR
Sbjct 247 VRPEDMDAGGMMTVFPWRVSDGFGETEESRKKLLHGLKGIRNPVMLIRLRPDDGVRAIKR 306
Query 336 KGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARA 395
+GQESFN+G+++A+TKVCSH GCP+SLYEQQ+ RILCPCHQSQF+AL + KP+FGPAARA
Sbjct 307 QGQESFNYGDYWAYTKVCSHFGCPTSLYEQQTNRILCPCHQSQFNALEYGKPVFGPAARA 366
Query 396 LAQLPITIDTDGYLVANGDFVEPVGPAFWERT 427
LAQLPI+++ GY+VANGDF+E VGPAFWE T
Sbjct 367 LAQLPISVNEQGYMVANGDFIEQVGPAFWEAT 398
>gi|262202949|ref|YP_003274157.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262086296|gb|ACY22264.1| Rieske (2Fe-2S) iron-sulphur domain protein [Gordonia bronchialis
DSM 43247]
Length=382
Score = 443 bits (1139), Expect = 3e-122, Method: Compositional matrix adjust.
Identities = 221/383 (58%), Positives = 276/383 (73%), Gaps = 12/383 (3%)
Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108
P + L MSN EL+ LG LDGV I ++ R+P G+K EKRAER VA+W + G+ +
Sbjct 9 PTQDELEQMSNDELVKLGTNLDGVEIIHRSERYPEPGSKVEKRAERQVAIWFTVSGISAI 68
Query 109 ALLLIFLFWPWEFKAADGESDFI-YSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEIS 167
A +IF++ WEF A G +D+ Y+L TPL G+TFGLS+LSI I VL K+F+P EI+
Sbjct 69 ACFIIFIWNHWEF-ALPGSADYWRYTLNTPLLGITFGLSVLSIGIALVLITKKFLPAEIA 127
Query 168 IQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLI 227
+Q+RHDG S E+D+KT+VA L D+ ST+ RRK++ S G+GAF L+AF GGLI
Sbjct 128 VQDRHDGGSSELDKKTIVAELVDSGTTSTLGRRKMLIGSAVFGLGAFAFTGLIAFVGGLI 187
Query 228 KNPWKPVVPTAEGKKAVLWTSGWT--PRYQGETIYLARATGTEDGPPFIKMRPEDMDAGG 285
KNPW AEG + LW SGW+ P ET+YL R TG D +RPED+DAG
Sbjct 188 KNPW------AEGDNSPLWHSGWSTLPGQPKETVYLRRDTG--DPWRVALVRPEDLDAGA 239
Query 286 METVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGE 345
METVFPWR SDG G S HKL E +RNPVMLIR++P D VKR+GQESFN+G+
Sbjct 240 METVFPWRVSDGYGADEHSRHKLLEGLRQVRNPVMLIRLRPEDAKNAVKRRGQESFNYGD 299
Query 346 FFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 405
+FA+TKVCSHLGCP+SLYEQ++ RILCPCHQSQFDAL +AKP+FGPAARALAQLPIT++
Sbjct 300 YFAYTKVCSHLGCPTSLYEQRTNRILCPCHQSQFDALQYAKPVFGPAARALAQLPITVNN 359
Query 406 DGYLVANGDFVEPVGPAFWERTT 428
+GYLVA GDF+EPVGPAFWER +
Sbjct 360 EGYLVAAGDFIEPVGPAFWERRS 382
>gi|229490440|ref|ZP_04384281.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus
erythropolis SK121]
gi|229322730|gb|EEN88510.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus
erythropolis SK121]
Length=358
Score = 442 bits (1136), Expect = 6e-122, Method: Compositional matrix adjust.
Identities = 221/371 (60%), Positives = 270/371 (73%), Gaps = 16/371 (4%)
Query 57 MSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLF 116
MS +L+ LG LDGV + Y+ RW V+GT+AEKRAER+VA W L GV +A + I+LF
Sbjct 1 MSRDDLVKLGTNLDGVDVVYRRDRWSVKGTRAEKRAERNVAFWFGLAGVSAIAFIAIYLF 60
Query 117 WPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGAS 176
WPWE+ A E+ YSL TPL GLT GL+IL + IGAV + K+FIPEE+SIQ+RHDG S
Sbjct 61 WPWEYAGAGDENYGKYSLYTPLIGLTMGLAILGVGIGAVQFTKKFIPEEVSIQDRHDGGS 120
Query 177 REIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVP 236
E+DR+T+VA L D E ST+ RRK I S G GA G+ +V GGLIKNPW
Sbjct 121 TEVDRRTIVAELGDTLETSTLPRRKAIKRSLMFGGGALGV-MMVMPLGGLIKNPW----- 174
Query 237 TAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESD 296
A+G + LW SGWTP Y GETIYL R TG + + +RPED+DAG METVFP+RESD
Sbjct 175 -AKGDDSPLWVSGWTPNYPGETIYLRRDTGRPED--IVLVRPEDLDAGSMETVFPFRESD 231
Query 297 -GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSH 355
GD H L GIRN VMLIR++ D RV KRKGQESFN+G++FA++K+C+H
Sbjct 232 RGD------EHALLAALRGIRNSVMLIRLRTEDTARVTKRKGQESFNYGDYFAYSKICTH 285
Query 356 LGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDF 415
LGCP+SLYEQQS RILCPCHQSQFDAL + KPIFGPAARAL QLPIT++ +G+LVA+GDF
Sbjct 286 LGCPTSLYEQQSNRILCPCHQSQFDALTYGKPIFGPAARALPQLPITVNEEGFLVADGDF 345
Query 416 VEPVGPAFWER 426
+E +GPAFWER
Sbjct 346 IEALGPAFWER 356
>gi|317506582|ref|ZP_07964374.1| Rieske domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316255091|gb|EFV14369.1| Rieske domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length=383
Score = 440 bits (1131), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 223/386 (58%), Positives = 278/386 (73%), Gaps = 11/386 (2%)
Query 46 PREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGV 105
P +P L+ MS EL+ LG DGVR+ ++ RW V GTKAEKRAER VA WL LGG
Sbjct 6 PTDPTPEELSRMSRDELVTLGLAKDGVRLIHRTERWAVPGTKAEKRAERLVAFWLFLGGF 65
Query 106 FGLALLLIFLFWPWEFKAADGESDFI-YSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPE 164
LALL +FLF WE+ A GE + Y+ TPL G+T G+SIL++ IGA++Y KRFIPE
Sbjct 66 AALALLGVFLFGHWEY-AGPGERGYTAYTWETPLIGITMGVSILALGIGAIVYTKRFIPE 124
Query 165 EISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAG 224
EI++Q+RHDG S+ +D+ T A L D+ E ST+ RR +I + FG + F G
Sbjct 125 EIAVQDRHDGGSKPVDKLTFGAILNDSLETSTLPRRTMIKRALLFSGSVFGAAAGIFFLG 184
Query 225 GLIKNPWKPVVPTAEGKKAVLWTSGWTPRY--QGETIYLARATGTEDGPPFIKMRPEDMD 282
G I+NPW A+G + LW +GWTPR +G+ IYL R T +D ++PED+
Sbjct 185 GAIRNPW------AKGNDSDLWHTGWTPRKGEEGKPIYLRRYT-PQDIYSVEIVKPEDLA 237
Query 283 AGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFN 342
+GGMETVFPWRESDG G T ES +L E GIRNPVMLIR++ D RVVKRKGQE+FN
Sbjct 238 SGGMETVFPWRESDGKGETEESRERLFESFHGIRNPVMLIRLRQEDAQRVVKRKGQENFN 297
Query 343 FGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPIT 402
+GE++A+TKVCSH+GCP+SLYEQQ+ RILCPCHQSQFDALH+ KPIFGPAARALAQLPIT
Sbjct 298 YGEYYAYTKVCSHVGCPTSLYEQQTNRILCPCHQSQFDALHYGKPIFGPAARALAQLPIT 357
Query 403 IDTDGYLVANGDFVEPVGPAFWERTT 428
++ +GYLVANGDF+EPVGPAFWER +
Sbjct 358 VNEEGYLVANGDFIEPVGPAFWERRS 383
>gi|326382514|ref|ZP_08204205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326198633|gb|EGD55816.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length=383
Score = 439 bits (1129), Expect = 4e-121, Method: Compositional matrix adjust.
Identities = 217/383 (57%), Positives = 275/383 (72%), Gaps = 11/383 (2%)
Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108
P + LAAMS E + LG LDGV I ++ R+P GTKAEKRAE +VA+W +L G+F +
Sbjct 9 PSDDQLAAMSRDEKVRLGTNLDGVEIIHRAERFPEPGTKAEKRAEFAVAIWFVLAGLFAI 68
Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168
A +F++ WEF+ D + Y+L TPL G++FGLSILS G V KRFIP EI++
Sbjct 69 AGFALFIWNEWEFRMPDESGYWAYTLYTPLLGVSFGLSILSFGFGVVQLTKRFIPAEIAV 128
Query 169 QERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIK 228
Q+RHDG S E+D++TVVA L D + ST+ RRK+I S G+GA + VA GG IK
Sbjct 129 QDRHDGGSTEVDKQTVVAELDDTLQTSTLPRRKMIIGSAVFGLGALSVAGGVAAIGGFIK 188
Query 229 NPWKPVVPTAEGKKAVLWTSGWTPRY---QGETIYLARATGTEDGPPFIKMRPEDMDAGG 285
NPW A+G A LW SGW+P Y +GET++L R TG + RPED+DAG
Sbjct 189 NPW------AKGDDAPLWHSGWSPIYNETKGETVFLRRDTGNPYQVALV--RPEDLDAGA 240
Query 286 METVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGE 345
METVFPWR SDG G T ES HKL E +RNPVMLIR++P+D V+KRKGQESFN+G+
Sbjct 241 METVFPWRVSDGYGETEESRHKLLEGLREVRNPVMLIRLRPADGKHVIKRKGQESFNYGD 300
Query 346 FFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 405
++A+TKVCSHLGCP+SLYEQQ+ RILCPCHQSQF+AL + K +FGPAARALAQLP++++
Sbjct 301 YYAYTKVCSHLGCPTSLYEQQTNRILCPCHQSQFNALEYGKAVFGPAARALAQLPLSVNN 360
Query 406 DGYLVANGDFVEPVGPAFWERTT 428
GY+VANGDF+EPVGPAFWER +
Sbjct 361 QGYMVANGDFIEPVGPAFWERKS 383
>gi|333918950|ref|YP_004492531.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481171|gb|AEF39731.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Amycolicicoccus
subflavus DQS3-9A1]
Length=382
Score = 433 bits (1114), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 210/383 (55%), Positives = 265/383 (70%), Gaps = 19/383 (4%)
Query 47 REPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVF 106
+ P LA MS EL LG LD V + Y+ RWP++G+KAEKRAER +A W L G+
Sbjct 8 QNPTPEELANMSQDELAKLGANLDDVDVIYRRNRWPIKGSKAEKRAERQIAFWFALAGLS 67
Query 107 GLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEI 166
GLA + IF+FWPWE++ E +YSLTTPLYGLTFGLSILSI I VL K+ IPEEI
Sbjct 68 GLAFVAIFVFWPWEYRTVGEEGYALYSLTTPLYGLTFGLSILSIGIAVVLIAKKMIPEEI 127
Query 167 SIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGL 226
++Q+RHDG S E+D++T VA L DA++ STI RR +I S G+GAF + V GG+
Sbjct 128 AVQQRHDGPSEEVDQRTTVALLRDAYDTSTIGRRGMIKWSAAFGIGAFAVAAPVGLVGGM 187
Query 227 IKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGM 286
+KNPW A+ + LW S WTP Y GETIYL R TG I RPED+DAGGM
Sbjct 188 VKNPW------ADRDDSALWRSLWTPDYPGETIYLRRDTGRITDVALI--RPEDIDAGGM 239
Query 287 ETVFPWRES---DGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNF 343
ETVFP++ES D D H+ + VMLI ++ D R V+R+GQE+FN+
Sbjct 240 ETVFPFKESWRGDHDALLKSFRHEY--------SAVMLIHLRAEDANRAVRREGQETFNY 291
Query 344 GEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITI 403
G FFA++K+C+HL CP+SLYEQQ+ RILCPCHQSQFD + +AKP+FGPA RAL QLPIT+
Sbjct 292 GNFFAYSKICTHLACPTSLYEQQTQRILCPCHQSQFDVMQYAKPVFGPATRALPQLPITV 351
Query 404 DTDGYLVANGDFVEPVGPAFWER 426
+ +GY+VANGDF+EP+GPAFWER
Sbjct 352 NEEGYMVANGDFIEPLGPAFWER 374
>gi|29365474|dbj|BAC66447.1| Fe-S protein of cytochrome c reductase complex [Rhodococcus rhodochrous]
Length=373
Score = 414 bits (1065), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 218/374 (59%), Positives = 280/374 (75%), Gaps = 16/374 (4%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L MS +L+ALG LDGV +A+++ RWPV GT+AEKRAER+VA W L GV LA + +
Sbjct 13 LDQMSRDDLVALGTNLDGVDVAFRKDRWPVGGTRAEKRAERNVAFWFGLAGVSALAFIAV 72
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
F+FWPWE++ ++ +Y+L TPL GLT GL+IL + +GAV + K+FIPEE+SIQ+RHD
Sbjct 73 FIFWPWEYQGPGEDNYALYNLYTPLLGLTLGLAILGVGVGAVQFTKKFIPEEVSIQDRHD 132
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+DR+T+VA L+D+ + ST+ RRKLI + G GA GLG ++ GGLIKNPW
Sbjct 133 GVSSEVDRRTIVAELSDSLDTSTLPRRKLIKRTALFGGGALGLGLIMPL-GGLIKNPW-- 189
Query 234 VVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWR 293
AEG + LW SGWTPRY GETIYL R TG + + +RPED+DAGGMETVFP+R
Sbjct 190 ----AEGDDSPLWVSGWTPRYPGETIYLRRDTGRVND--IVLVRPEDLDAGGMETVFPFR 243
Query 294 ESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKV 352
ESD GD H L GIRN VMLIR++ D +V+KRKGQESFN+G++FA++K+
Sbjct 244 ESDRGD------EHALLGGLRGIRNAVMLIRLRTEDTAKVIKRKGQESFNYGDYFAYSKI 297
Query 353 CSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVAN 412
C+HLGCP+SLY QQ+ RILCPCHQSQF+AL + KP+FGPAARAL QLPIT++ +G+LVA
Sbjct 298 CTHLGCPTSLYGQQTNRILCPCHQSQFNALEYGKPLFGPAARALPQLPITVNEEGFLVAG 357
Query 413 GDFVEPVGPAFWER 426
GDF+E +GPAFWER
Sbjct 358 GDFIEALGPAFWER 371
>gi|237785312|ref|YP_002906017.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758224|gb|ACR17474.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Corynebacterium
kroppenstedtii DSM 44385]
Length=411
Score = 408 bits (1049), Expect = 8e-112, Method: Compositional matrix adjust.
Identities = 202/402 (51%), Positives = 270/402 (68%), Gaps = 31/402 (7%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
LAAMSN EL LG +LD V +AY++ R+P++ EKRA RSV +W LLG VF +A + +
Sbjct 14 LAAMSNDELARLGTELDDVTVAYRKQRFPMDNDPEEKRAARSVGLWFLLGAVFAIAFIAV 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
+LFWPW++K + ++YSL TPL+G GL+IL + IGAV + K+FIPEEIS+Q RHD
Sbjct 74 YLFWPWKYKGLGEDGLWLYSLYTPLFGACMGLAILCLGIGAVKFTKKFIPEEISVQRRHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+D+KT+VA L D++E ST+ RRK++ G G A GL L+ GG+IKNPWKP
Sbjct 134 GPSDEVDQKTLVALLNDSWETSTLGRRKVLKGIMGTGAVAAGLA-LIFPIGGMIKNPWKP 192
Query 234 VVPTAEGK-KAVLWTSGWTPRYQGETIYLARATG------------------TEDGPPFI 274
+ + LWT+GWTP +G+ +YL R TG T +
Sbjct 193 KAKGMDVQGDGTLWTTGWTPTEKGKKVYLGRDTGVTAEKHEGGYEATGETYETRGVTRLV 252
Query 275 KMRPEDMDAGGMETVFPWRES--------DGDGTTVESHHKLQEIAMGIRNPVMLIRIKP 326
++RPED++AG METVFP E D + E+H E G RN VMLIR++
Sbjct 253 RLRPEDLNAGAMETVFPLLEDVVNDHDKYDKNADVYEAH---MESIHGSRNSVMLIRLRH 309
Query 327 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK 386
SD R ++RKGQE F+FG+++A++K+C+H+GCP+SLYEQQ+ RILCPCHQSQFDALH+ K
Sbjct 310 SDAKRAIQRKGQEDFHFGDYYAYSKICTHIGCPTSLYEQQTNRILCPCHQSQFDALHYGK 369
Query 387 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
P+FGPAAR L QLPI +D +G+L A G+FVE VGPAFWER +
Sbjct 370 PVFGPAARPLPQLPIAVDDEGFLYAKGNFVESVGPAFWERRS 411
>gi|38234200|ref|NP_939967.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
diphtheriae NCTC 13129]
gi|62900986|sp|Q6NGA2.1|QCRA_CORDI RecName: Full=Probable menaquinol-cytochrome c reductase iron-sulfur
subunit; AltName: Full=Cytochrome bc1 complex Rieske
iron-sulfur protein; AltName: Full=Rieske iron-sulfur protein
gi|38200462|emb|CAE50150.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
diphtheriae]
Length=406
Score = 402 bits (1034), Expect = 5e-110, Method: Compositional matrix adjust.
Identities = 203/393 (52%), Positives = 268/393 (69%), Gaps = 22/393 (5%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L AMSN+EL LG +LDGV +AY++ R+PVEG A KRA R+V +W +G V LA L +
Sbjct 14 LDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWFGIGIVSALAFLAV 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
+LF PWE+K + +IY+ TPL GLT GL+ILS+ IG + Y K+ IP EIS+Q RHD
Sbjct 74 YLFMPWEYKGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKKIIPSEISVQRRHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S EIDR+T+ A L D++E ST+ RRK++ G+G GL T++A GG++KNPWK
Sbjct 134 GPSEEIDRRTITALLNDSWETSTLGRRKVLKSMLGIGGVLAGL-TIIAPLGGMVKNPWKK 192
Query 234 VVPTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMRP 278
+G LWTSGWT +G +YL R TG T+ I+MRP
Sbjct 193 GELGIQGD-GTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYSTQGVSRLIRMRP 251
Query 279 EDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRVV 333
ED+ A METVFP E DG ++ + E M G RN VMLIR++ SD +V+
Sbjct 252 EDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLIRLRNSDANKVI 311
Query 334 KRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAA 393
+R+GQE F++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPAA
Sbjct 312 EREGQEDFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPAA 371
Query 394 RALAQLPITIDTDGYLVANGDFVEPVGPAFWER 426
RAL QLPIT+D +GYLVA G+F+EPVGPAFWER
Sbjct 372 RALPQLPITVDEEGYLVAAGNFIEPVGPAFWER 404
>gi|213965204|ref|ZP_03393401.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
amycolatum SK46]
gi|213952056|gb|EEB63441.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
amycolatum SK46]
Length=403
Score = 402 bits (1033), Expect = 6e-110, Method: Compositional matrix adjust.
Identities = 198/392 (51%), Positives = 267/392 (69%), Gaps = 19/392 (4%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L+ MSN +L LG +LD V IAY++ R+P+ AEKRA R VA+WL L + GLA + I
Sbjct 14 LSKMSNADLARLGAELDDVTIAYRKERFPIANDPAEKRAARGVAIWLALSVILGLAFIAI 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
+LF+PW +K E ++Y++ TPL G+T G I+++ +GAV + KRFIPEEIS+Q RHD
Sbjct 74 YLFYPWHYKGHGEEGLWLYTMYTPLLGITLGGCIVTLGVGAVKFTKRFIPEEISVQRRHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+D+KT+VA L D+++ ST+ RR I G G G+G ++ GG+IKNPWKP
Sbjct 134 GPSEEVDQKTIVALLNDSWQTSTLGRRSAIKGLLGTGAVLAGIGMILPI-GGMIKNPWKP 192
Query 234 VVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT--EDGPP---------FIKMRPEDMD 282
LWT+GWT +GE +YL R TG E+G ++MRPED+
Sbjct 193 RHDVDVTGDGTLWTTGWTLVEKGERVYLGRDTGAIAEEGEHGYTTKGVSRLVRMRPEDLS 252
Query 283 AGGMETVFPW---RESDGDGTTVES---HHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRK 336
AG METVFP +DGD + ++ H + I G RN VMLIR++ D + V R+
Sbjct 253 AGAMETVFPLPAADVNDGDKYSKDADVYEHHMHSI-HGSRNSVMLIRLRAQDAEKAVLRQ 311
Query 337 GQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARAL 396
GQE F++G++FAF+K+C+H+GCP+SLYEQQ+ RILCPCHQSQFDALH+ KP+FGPAARAL
Sbjct 312 GQEDFHYGDYFAFSKICTHIGCPTSLYEQQTNRILCPCHQSQFDALHYGKPVFGPAARAL 371
Query 397 AQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
QLPI++D +GY+ A G+FVEPVGPAFWER +
Sbjct 372 PQLPISVDEEGYMYAKGNFVEPVGPAFWERQS 403
>gi|255325370|ref|ZP_05366476.1| menaquinol-cytochrome c reductase iron-sulfur subunit [Corynebacterium
tuberculostearicum SK141]
gi|311741501|ref|ZP_07715325.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255297935|gb|EET77246.1| menaquinol-cytochrome c reductase iron-sulfur subunit [Corynebacterium
tuberculostearicum SK141]
gi|311303671|gb|EFQ79750.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium
pseudogenitalium ATCC 33035]
Length=406
Score = 400 bits (1029), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 204/407 (51%), Positives = 273/407 (68%), Gaps = 23/407 (5%)
Query 43 TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLL 102
+ V + A L MSN EL ALG +LD V +A+++ R+PVEG AEKRA R+VA+WL L
Sbjct 2 SNVKKNYTNAELDKMSNDELAALGTELDDVTVAFRKERFPVEGDPAEKRAGRNVAIWLFL 61
Query 103 GGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFI 162
+ GL L ++LFWPW++K E ++L TPL G+T L+I + I V Y K+ +
Sbjct 62 SVIGGLGFLGVYLFWPWQYKQLGEEGHIWHTLYTPLLGITAALAICGLGIAIVQYVKKIL 121
Query 163 PEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGTLVA 221
PEEIS+Q RHDG S E+DR+T+ A L D+++ ST+ RRK + GL G G+ FGL T++A
Sbjct 122 PEEISVQRRHDGPSEEVDRRTLTALLNDSWKTSTLGRRKTVQGLLGGAGV-LFGL-TVIA 179
Query 222 FAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT-------EDGPPF- 273
GG IKNPWK LWTSGWT +G +YLAR TGT E G +
Sbjct 180 PLGGAIKNPWKVRHNMNYAGDGTLWTSGWTMHNEGVKLYLARDTGTIAEKHSGETGEHYS 239
Query 274 -------IKMRPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVML 321
+++RPED+ AGGMETVFP E D DG ++ + E M G RN VML
Sbjct 240 TKGVTRLVRVRPEDLAAGGMETVFPLAEEDVNDGDKYDAERDVYEHHMHSIHGNRNAVML 299
Query 322 IRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDA 381
IR++ +D + ++R+GQE F+ G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDA
Sbjct 300 IRLRHNDAQKAIEREGQEDFHHGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDA 359
Query 382 LHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
LH+ KP+FGPAARAL QLPIT+D +GYLVA G+F+EPVGPAFWER +
Sbjct 360 LHYGKPVFGPAARALPQLPITVDDEGYLVAQGNFIEPVGPAFWERKS 406
>gi|227503252|ref|ZP_03933301.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium
accolens ATCC 49725]
gi|227075755|gb|EEI13718.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium
accolens ATCC 49725]
Length=406
Score = 399 bits (1026), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 205/407 (51%), Positives = 275/407 (68%), Gaps = 23/407 (5%)
Query 43 TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLL 102
+ V + +A L MSN EL ALG +LD V +A+++ R+PVEG AEKRA R+VA+WL L
Sbjct 2 SNVKKNYTDAELDKMSNDELAALGTELDDVTVAFRKERFPVEGDPAEKRAGRNVAIWLAL 61
Query 103 GGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFI 162
+ GLA L ++LFWPW++K + ++L TPL G+T LSI + V Y K+ +
Sbjct 62 SVIGGLAFLGVYLFWPWQYKQLGEDGLVWHTLYTPLLGITAALSIFGLGFAIVQYVKKIL 121
Query 163 PEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGTLVA 221
PEEIS+Q RHDG S E+DR+T+ A L D+++ ST+ RRK I GL G G+ FGL T++A
Sbjct 122 PEEISVQRRHDGPSEEVDRRTLTALLNDSWKTSTLGRRKTIQGLLGGAGV-LFGL-TVIA 179
Query 222 FAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT-------EDGPPF- 273
GG I+NPWK LWTSGWT +G +YLAR TGT E G +
Sbjct 180 PLGGAIRNPWKVRHELNYAGDGTLWTSGWTMHEKGVKLYLARDTGTIAEKHSGESGEHYT 239
Query 274 -------IKMRPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVML 321
+++RPED+ AGGMETVFP E D DG ++ + E M G RN VML
Sbjct 240 TEGVTRLVRVRPEDLAAGGMETVFPLAEEDVNDGDQYDAKRDVYEHHMHSIHGNRNAVML 299
Query 322 IRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDA 381
IR++ SD + ++R+GQE+F+ G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDA
Sbjct 300 IRLRHSDAQKAIEREGQENFHHGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDA 359
Query 382 LHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
LH+ KP+FGPAARAL QLPIT+D +GYLVA G+F+EPVGPAFWER +
Sbjct 360 LHYGKPVFGPAARALPQLPITVDDEGYLVAEGNFIEPVGPAFWERKS 406
>gi|306836519|ref|ZP_07469490.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium
accolens ATCC 49726]
gi|304567609|gb|EFM43203.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium
accolens ATCC 49726]
Length=417
Score = 399 bits (1025), Expect = 5e-109, Method: Compositional matrix adjust.
Identities = 206/410 (51%), Positives = 275/410 (68%), Gaps = 23/410 (5%)
Query 40 AKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVW 99
A + V + +A L MSN EL ALG +LD V +A+++ R+PVEG AEKRA R+VA+W
Sbjct 10 ALMSNVKKNYTDAELDKMSNDELAALGTELDDVTVAFRKERFPVEGDPAEKRAGRNVAIW 69
Query 100 LLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQK 159
L L + GLA L ++LFWPW++K + ++L TPL G+T LSI + V Y K
Sbjct 70 LALSVIGGLAFLGVYLFWPWQYKQLGEDGLVWHTLYTPLLGITAALSIFGLGFAIVQYVK 129
Query 160 RFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGT 218
+ +PEEIS+Q RHDG S E+DR+T+ A L D+++ ST+ RRK I GL G G+ FGL T
Sbjct 130 KILPEEISVQRRHDGPSEEVDRRTLTALLNDSWKTSTLGRRKTIQGLLGGAGV-LFGL-T 187
Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT-------EDGP 271
++A GG I+NPWK LWTSGWT +G +YLAR TGT E G
Sbjct 188 VIAPLGGAIRNPWKVRHEVNYAGDGTLWTSGWTMHEKGVKLYLARDTGTIAEKHSGESGE 247
Query 272 PF--------IKMRPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNP 318
+ +++RPED+ AGGMETVFP E D DG ++ + E M G RN
Sbjct 248 HYTTEGVTRLVRVRPEDLAAGGMETVFPLAEEDVNDGDQYDAKRDVYEHHMHSIHGNRNA 307
Query 319 VMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQ 378
VMLIR++ SD + ++R+GQE F+ G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQ
Sbjct 308 VMLIRLRHSDAQKAIEREGQEDFHHGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQ 367
Query 379 FDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
FDALH+ KP+FGPAARAL QLPIT+D +GYLVA G+F+EPVGPAFWER +
Sbjct 368 FDALHYGKPVFGPAARALPQLPITVDDEGYLVAEGNFIEPVGPAFWERKS 417
>gi|319950680|ref|ZP_08024581.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Dietzia
cinnamea P4]
gi|319435663|gb|EFV90882.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Dietzia
cinnamea P4]
Length=396
Score = 399 bits (1024), Expect = 7e-109, Method: Compositional matrix adjust.
Identities = 207/403 (52%), Positives = 270/403 (67%), Gaps = 25/403 (6%)
Query 43 TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEG--TKAEKRAERSVAVWL 100
+ P+ P A L MS EL+ LG +LD V + ++E RWP EG T+AEKRA R+V W
Sbjct 2 SETPKNPSPADLDRMSEAELVRLGTELDEVDVRHRENRWP-EGVTTRAEKRAARTVTTWF 60
Query 101 LLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKR 160
L +F LA +++LFWPWE++ + ++Y TPL G T GLSIL + GAV + K+
Sbjct 61 ALSALFALAFAVVYLFWPWEYRGEGEDGFWLYMAYTPLLGGTIGLSILFLGFGAVQFTKK 120
Query 161 FIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLV 220
F+PEEIS+Q RHDG S E+DR+T+VA L D+++ STI RRK++G G G+G GL ++
Sbjct 121 FVPEEISVQTRHDGVSDEVDRRTIVAELNDSWKTSTIGRRKVMGGFLGAGVGLIGLSAIL 180
Query 221 AFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG-------ETIYLARATGT--EDGP 271
GG+IKNPWK T G L T+GWT + E +YL R TG DG
Sbjct 181 PL-GGMIKNPWKRGEMTLSGD-GTLHTTGWTLASENRPDGLPPEKVYLGRDTGKVYPDGH 238
Query 272 P------FIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIK 325
P ++R +D+ AGG+E+VFP ES G E H + G RN VMLIR +
Sbjct 239 PPAGEGRLERIRVDDLAAGGLESVFPLPES-ALGNFEEHMHSIH----GSRNSVMLIRFR 293
Query 326 PSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFA 385
P D RV KRKGQE+FN+G+ +A++K+C+HLGCP+SLYEQQ++R LCPCHQSQFDAL +A
Sbjct 294 PEDAARVTKRKGQENFNYGDLYAYSKICTHLGCPTSLYEQQTHRFLCPCHQSQFDALEYA 353
Query 386 KPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
KP+FGPAARAL QLPI +D++GYLVANGDFVEPVGPAFWER +
Sbjct 354 KPVFGPAARALPQLPIAVDSEGYLVANGDFVEPVGPAFWERRS 396
>gi|256375513|ref|YP_003099173.1| Rieske (2Fe-2S) domain-containing protein [Actinosynnema mirum
DSM 43827]
gi|255919816|gb|ACU35327.1| Rieske (2Fe-2S) domain protein [Actinosynnema mirum DSM 43827]
Length=374
Score = 397 bits (1020), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 194/380 (52%), Positives = 254/380 (67%), Gaps = 15/380 (3%)
Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108
PDEA L+ MS EL+ LG ++DGV + + E RWPV+GT+AEKRAER VA+W + + G+
Sbjct 10 PDEAQLSKMSRDELVKLGTEMDGVELVHYEERWPVKGTRAEKRAERLVALWFAIAALAGV 69
Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168
L FLFWPW+++A E+ ++Y L TP+ G T LS+L++ +GA+LY K+FIPEE+++
Sbjct 70 GFLAAFLFWPWKYEAPHTENHWLYQLYTPVIGATLALSVLALGVGALLYTKKFIPEELAV 129
Query 169 QERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIK 228
Q+RHDG S +D T+VA L D ST+ RR LI + G+G G FGLG L GG++K
Sbjct 130 QQRHDGGSSPVDSATLVAELGDVGARSTLGRRSLIKRTAGLGAGVFGLGVLAVPLGGMVK 189
Query 229 NPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMET 288
NP K LW +GW GE +YL R TG + RPED+DAGG ET
Sbjct 190 NP-----HADSETKDSLWHTGWKSE-NGEKVYLRRHTGNFHDVELV--RPEDLDAGGFET 241
Query 289 VFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFA 348
VFP+RES+ H+L + NPVMLIR++P V KR GQE FN+G+ +A
Sbjct 242 VFPFRESERG-----HEHELVQALKRADNPVMLIRLRPGQA--VTKRAGQEDFNYGDLYA 294
Query 349 FTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGY 408
++K+C+HLGCP+SLYEQQ+ +LCPCHQSQFD H+ KP FGPA RAL QLPIT+D DGY
Sbjct 295 YSKICTHLGCPTSLYEQQTGLLLCPCHQSQFDVFHYGKPRFGPATRALPQLPITVDEDGY 354
Query 409 LVANGDFVEPVGPAFWERTT 428
L+A DF E VGPAFWER +
Sbjct 355 LIARSDFTEAVGPAFWERKS 374
>gi|227488503|ref|ZP_03918819.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543109|ref|ZP_03973158.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091397|gb|EEI26709.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181097|gb|EEI62069.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
glucuronolyticum ATCC 51866]
Length=403
Score = 396 bits (1018), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 204/398 (52%), Positives = 268/398 (68%), Gaps = 31/398 (7%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L MS ++L LG ++DGV IAY++ R+P+ AEKRA R+V WL+LG + LA L I
Sbjct 14 LKNMSQEDLARLGTEMDGVTIAYRKERFPITNDPAEKRASRTVGFWLVLGIICALAFLAI 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
+LFWPWE+K E + Y+ TPL G+T GLSI+S+AI LY KRFIPEEI++QERHD
Sbjct 74 YLFWPWEYKGLGQEGMWWYTFYTPLLGVTMGLSIISLAIATALYIKRFIPEEIAVQERHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+D++T+ A L D++E S++ RRK++ FG G G+ +++A GG+IKNPWKP
Sbjct 134 GPSDEVDQRTLTALLNDSWETSSLGRRKVLKGLFGTGAVLAGI-SIIAPLGGMIKNPWKP 192
Query 234 VVPTAEGKKAVLWTSGW----TPRYQGETIYLARATG------------TEDGPPFIKMR 277
+G LWTSGW TP + E IYL R TG T +++R
Sbjct 193 GKLGIQGD-GTLWTSGWSLLDTP--EVEKIYLGRDTGIAAEKDEHGNYHTNGLARLVRVR 249
Query 278 PEDMDAGGMETVFPW------RESDGDGTTVESH-HKLQEIAMGIRNPVMLIRIKPSDLG 330
PED+ AGGMETVFP R D E H H + G RN VMLIR++ D
Sbjct 250 PEDLAAGGMETVFPLLPEAVIRHGDKTKDVYEEHMHSIH----GPRNAVMLIRLRSEDAN 305
Query 331 RVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFG 390
RVV+R+GQE ++FG+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FG
Sbjct 306 RVVEREGQEDYHFGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFG 365
Query 391 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
PAARAL QLPIT+D +GYLVA +F EPVGPAFWER +
Sbjct 366 PAARALPQLPITVDEEGYLVATRNFSEPVGPAFWERES 403
>gi|340794100|ref|YP_004759563.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
variabile DSM 44702]
gi|340534010|gb|AEK36490.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium
variabile DSM 44702]
Length=386
Score = 395 bits (1016), Expect = 5e-108, Method: Compositional matrix adjust.
Identities = 193/388 (50%), Positives = 264/388 (69%), Gaps = 18/388 (4%)
Query 57 MSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLF 116
MS++EL LG +LDGV +AY++ R+PVE AEKRA + VW L V G+A + ++LF
Sbjct 1 MSDEELARLGTELDGVTVAYRKERFPVENDPAEKRAAFGINVWFALSVVLGIAFVAVYLF 60
Query 117 WPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGAS 176
WPW++K + + ++Y+L TPL G T GLSI+ + +GAV + K+F+PEEIS+Q RHDG S
Sbjct 61 WPWQYKHLEEDGLWMYTLYTPLLGATAGLSIICLGVGAVQFSKKFVPEEISVQTRHDGPS 120
Query 177 REIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVP 236
E+DRKT+ A L DA++ ST+ RRK++ G G GL ++ GG+IKNPWKP
Sbjct 121 EEVDRKTITALLNDAWKTSTLGRRKVMMGLAGTGAALMGLAVVLPL-GGIIKNPWKPKAM 179
Query 237 TAEGKKAVLWTSGWTPRYQGETIYLARATG-----------TEDGPPFIKMRPEDMDAGG 285
+G LWT+GWT +GE +YL R T T+ +++RPED+DAG
Sbjct 180 GIQGD-GTLWTTGWTLVDEGEKVYLGRDTAAIAEEHNGHYTTQGVNRLVRVRPEDLDAGA 238
Query 286 METVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRVVKRKGQES 340
METVFP E DG +S+ + E M G RN VMLIR++ D + V+R GQE
Sbjct 239 METVFPLSEEMVNDGEKYDSNKDVYEEHMHSVHGPRNAVMLIRLRHEDAVKAVQRDGQED 298
Query 341 FNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLP 400
F++G+++A++K+C+H+GCP+SLYEQQ+ RILCPCHQSQFDALH+ KP+FGPAARAL +L
Sbjct 299 FHYGDYYAYSKICTHIGCPTSLYEQQTNRILCPCHQSQFDALHWGKPVFGPAARALPELS 358
Query 401 ITIDTDGYLVANGDFVEPVGPAFWERTT 428
I +D DGYL A +F+EPVGPAFWER +
Sbjct 359 INVDADGYLYAEHNFIEPVGPAFWERKS 386
>gi|344044860|gb|EGV40535.1| hypothetical protein CgS9114_08126 [Corynebacterium glutamicum
S9114]
Length=408
Score = 394 bits (1013), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 200/396 (51%), Positives = 264/396 (67%), Gaps = 22/396 (5%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L AMSN++L LG +LD V IAY++ R+P+ AEKRA R+V WL+LG + GL L
Sbjct 14 LNAMSNEDLARLGTELDDVTIAYRKERFPIPNDPAEKRAARAVTFWLVLGIIGGLGFLAT 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
++FWPWE+KA E Y+L TP+ G+T GL ILS+ VLY K+FIPEEI++Q RHD
Sbjct 74 YIFWPWEYKAHGDEGLLAYTLYTPMLGITSGLCILSLGFAVVLYVKKFIPEEIAVQRRHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+DR+T+VA L D+++ ST+ RRKLI G G GL T++A GG+IKNPWKP
Sbjct 134 GPSEEVDRRTIVALLNDSWQTSTLGRRKLIMGLAGGGAVLAGL-TIIAPMGGMIKNPWKP 192
Query 234 VV-PTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMR 277
P LWTSGWT +YL R T T ++MR
Sbjct 193 KEGPMDVQGDGTLWTSGWTLVENDVKVYLGRDTAAIAESHTDATGEHWSTTGVSRLVRMR 252
Query 278 PEDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRV 332
PED+ A METVFP E DG + + E M G RN VMLIR++ +D +V
Sbjct 253 PEDLAAASMETVFPLPAEMVNDGAEYDPAKDVYEHQMHSVHGPRNAVMLIRLRTADAEKV 312
Query 333 VKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPA 392
++R+GQESF++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPA
Sbjct 313 IEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPA 372
Query 393 ARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
ARAL QLPIT+D +GYL+A G+F+EP+GPAFWER +
Sbjct 373 ARALPQLPITVDEEGYLIAAGNFIEPLGPAFWERKS 408
>gi|145296152|ref|YP_001138973.1| hypothetical protein cgR_2072 [Corynebacterium glutamicum R]
gi|140846072|dbj|BAF55071.1| hypothetical protein [Corynebacterium glutamicum R]
Length=408
Score = 394 bits (1013), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 201/396 (51%), Positives = 263/396 (67%), Gaps = 22/396 (5%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L AMSN++L LG +LD V IAY++ R+P+ AEKRA R+V WL LG + GL L
Sbjct 14 LNAMSNEDLARLGTELDDVTIAYRKERFPIPNDPAEKRAARAVTFWLALGIIGGLGFLAT 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
++FWPWE+KA E Y+L TP+ G+T GL ILS+ VLY K+FIPEEI++Q RHD
Sbjct 74 YIFWPWEYKAHGDEGLLAYTLYTPMLGITSGLCILSLGFAVVLYVKKFIPEEIAVQRRHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+DR+T+VA L D+++ ST+ RRKLI G G GL T++A GG+IKNPWKP
Sbjct 134 GPSEEVDRRTIVALLNDSWQTSTLGRRKLIMGLAGGGAVLAGL-TIIAPMGGMIKNPWKP 192
Query 234 VV-PTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMR 277
P LWTSGWT +YL R T T ++MR
Sbjct 193 KEGPMDVQGDGTLWTSGWTLVENDVKVYLGRDTAAIAESHTDATGEHWSTTGVSRLVRMR 252
Query 278 PEDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRV 332
PED+ A METVFP E DG + + E M G RN VMLIR++ +D +V
Sbjct 253 PEDLAAASMETVFPLPAEMVNDGAEYDPAKDVYEHQMHSVHGPRNAVMLIRLRTADAEKV 312
Query 333 VKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPA 392
++R+GQESF++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPA
Sbjct 313 IEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPA 372
Query 393 ARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
ARAL QLPIT+D +GYL+A G+F+EPVGPAFWER +
Sbjct 373 ARALPQLPITVDEEGYLIAAGNFIEPVGPAFWERKS 408
>gi|225021889|ref|ZP_03711081.1| hypothetical protein CORMATOL_01921 [Corynebacterium matruchotii
ATCC 33806]
gi|305681459|ref|ZP_07404266.1| Rieske (2Fe-2S) domain protein [Corynebacterium matruchotii ATCC
14266]
gi|224945346|gb|EEG26555.1| hypothetical protein CORMATOL_01921 [Corynebacterium matruchotii
ATCC 33806]
gi|305659664|gb|EFM49164.1| Rieske (2Fe-2S) domain protein [Corynebacterium matruchotii ATCC
14266]
Length=405
Score = 394 bits (1011), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 203/397 (52%), Positives = 270/397 (69%), Gaps = 26/397 (6%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L MSN EL LG +LD V +AY++ R+P++ AEKRA R+VA+WL +G + +A L +
Sbjct 13 LNGMSNGELARLGTELDDVTVAYRKERFPIDNDPAEKRASRAVALWLGIGVLSAIAFLGV 72
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
++ WPW++K E +Y+ TPL G+T GL+ILS+ VLY K IPEEI++Q RHD
Sbjct 73 YIAWPWQYKGLGDEGVTLYTFYTPLLGITAGLAILSLGFAVVLYVKTIIPEEIAVQRRHD 132
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGTLVAF-AGGLIKNPW 231
G S E+DR+T+VA L D++E ST+ RRK++ GL +GM A +G ++A GG+IKNPW
Sbjct 133 GPSSEVDRRTIVALLNDSWETSTLGRRKVLQGL---LGMSAVLVGLVIAAPLGGMIKNPW 189
Query 232 KPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG-------TEDGPPF--------IKM 276
K +G LWTSGWT +G +YL R TG T+ G + ++M
Sbjct 190 KAGKLGIQGD-GTLWTSGWTLTEKGVKLYLGRDTGALAVKHETDAGEHYSTQGVTRLVRM 248
Query 277 RPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGR 331
RPED+ A METVFP E D DG + + E M G RN VMLIR++ SD +
Sbjct 249 RPEDLAAAAMETVFPLPEEDVNDGDLYDPTRDVYETHMHSIHGPRNAVMLIRLRSSDAAK 308
Query 332 VVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGP 391
VV+R GQE F+FG+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGP
Sbjct 309 VVERVGQEDFHFGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGP 368
Query 392 AARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
AARAL QLPIT+D DGYLVA G+FVEPVGPAFWER +
Sbjct 369 AARALPQLPITVDEDGYLVAAGNFVEPVGPAFWERKS 405
>gi|19553392|ref|NP_601394.1| Rieske Fe-S protein [Corynebacterium glutamicum ATCC 13032]
gi|62391030|ref|YP_226432.1| Rieske iron-sulfur protein [Corynebacterium glutamicum ATCC 13032]
gi|62900998|sp|Q79VE8.1|QCRA_CORGL RecName: Full=Menaquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Cytochrome bc1 complex Rieske iron-sulfur
protein; AltName: Full=Rieske iron-sulfur protein
gi|13274110|emb|CAC33827.1| rieske iron-sulfur protein [Corynebacterium glutamicum]
gi|21324960|dbj|BAB99583.1| Rieske Fe-S protein [Corynebacterium glutamicum ATCC 13032]
gi|41326369|emb|CAF20531.1| RIESKE IRON-SULFUR PROTEIN [Corynebacterium glutamicum ATCC 13032]
Length=408
Score = 393 bits (1010), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 199/396 (51%), Positives = 263/396 (67%), Gaps = 22/396 (5%)
Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113
L AMSN++L LG +LD V IAY++ R+P+ AEKRA R+V WL+LG + GL L
Sbjct 14 LNAMSNEDLARLGTELDDVTIAYRKERFPIANDPAEKRAARAVTFWLVLGIIGGLGFLAT 73
Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173
++FWPWE+KA E Y+L TP+ G+T GL ILS+ VLY K+FIPEEI++Q RHD
Sbjct 74 YIFWPWEYKAHGDEGLLAYTLYTPMLGITSGLCILSLGFAVVLYVKKFIPEEIAVQRRHD 133
Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233
G S E+DR+T+VA L D+++ ST+ RRKLI G G GL T++A GG+IKNPW P
Sbjct 134 GPSEEVDRRTIVALLNDSWQTSTLGRRKLIMGLAGGGAVLAGL-TIIAPMGGMIKNPWNP 192
Query 234 VV-PTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMR 277
P LWTSGWT +YL R T T ++MR
Sbjct 193 KEGPMDVQGDGTLWTSGWTLVENDVKVYLGRDTAAIAESHTDATGEHWSTTGVSRLVRMR 252
Query 278 PEDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRV 332
PED+ A METVFP E DG + + E M G RN VMLIR++ +D +V
Sbjct 253 PEDLAAASMETVFPLPAEMVNDGAEYDPAKDVYEHQMHSVHGPRNAVMLIRLRTADAEKV 312
Query 333 VKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPA 392
++R+GQESF++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPA
Sbjct 313 IEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPA 372
Query 393 ARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428
ARAL QLPIT+D +GYL+A G+F+EP+GPAFWER +
Sbjct 373 ARALPQLPITVDEEGYLIAAGNFIEPLGPAFWERKS 408
Lambda K H
0.320 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 877435408584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40