BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2195 Length=429 Score E Sequences producing significant alignments: (Bits) Value gi|15609332|ref|NP_216711.1| Rieske iron-sulfur protein QcrA [My... 877 0.0 gi|340627200|ref|YP_004745652.1| putative Rieske iron-sulfur pro... 875 0.0 gi|31793374|ref|NP_855867.1| Rieske iron-sulfur protein QcrA [My... 875 0.0 gi|254232348|ref|ZP_04925675.1| rieske iron-sulfur protein qcrA ... 874 0.0 gi|308232065|ref|ZP_07663992.1| Rieske iron-sulfur protein qcrA ... 822 0.0 gi|240168254|ref|ZP_04746913.1| Rieske iron-sulfur protein qcrA ... 720 0.0 gi|289745468|ref|ZP_06504846.1| ubiquinol-cytochrome c reductase... 715 0.0 gi|183983230|ref|YP_001851521.1| Rieske iron-sulfur protein QcrA... 702 0.0 gi|118618837|ref|YP_907169.1| Rieske iron-sulfur protein QcrA [M... 702 0.0 gi|342859905|ref|ZP_08716558.1| ubiquinol-cytochrome C reductase... 675 0.0 gi|108800259|ref|YP_640456.1| Rieske (2Fe-2S) domain-containing ... 656 0.0 gi|120404530|ref|YP_954359.1| Rieske (2Fe-2S) domain-containing ... 652 0.0 gi|118466759|ref|YP_881501.1| ubiquinol-cytochrome C reductase, ... 650 0.0 gi|41408032|ref|NP_960868.1| QcrA [Mycobacterium avium subsp. pa... 648 0.0 gi|336461918|gb|EGO40771.1| Rieske Fe-S protein [Mycobacterium a... 645 0.0 gi|145223541|ref|YP_001134219.1| Rieske (2Fe-2S) domain-containi... 642 0.0 gi|333990348|ref|YP_004522962.1| Rieske iron-sulfur protein QcrA... 639 0.0 gi|15827403|ref|NP_301666.1| Rieske iron-sulphur reductase compo... 633 2e-179 gi|118473759|ref|YP_888539.1| ubiquinol-cytochrome C reductase i... 631 8e-179 gi|254822833|ref|ZP_05227834.1| putative ubiquinol-cytochrome c ... 625 4e-177 gi|296166063|ref|ZP_06848510.1| probable ubiquinol-cytochrome c ... 622 4e-176 gi|169629054|ref|YP_001702703.1| ubiquinol-cytochrome c reductas... 581 8e-164 gi|343924167|ref|ZP_08763730.1| menaquinol-cytochrome c reductas... 454 1e-125 gi|54023696|ref|YP_117938.1| putative cytochrome c component [No... 451 8e-125 gi|296393479|ref|YP_003658363.1| Rieske (2Fe-2S) iron-sulfur dom... 449 4e-124 gi|111018145|ref|YP_701117.1| ubiquinol-cytochrome c reductase i... 447 2e-123 gi|226307084|ref|YP_002767044.1| menaquinol-cytochrome c reducta... 447 2e-123 gi|312140188|ref|YP_004007524.1| ubiquinol-cytochrome c reductas... 444 1e-122 gi|226360274|ref|YP_002778052.1| menaquinol-cytochrome c reducta... 444 1e-122 gi|296140390|ref|YP_003647633.1| Rieske (2Fe-2S) iron-sulfur dom... 443 3e-122 gi|262202949|ref|YP_003274157.1| rieske (2Fe-2S) iron-sulfur dom... 443 3e-122 gi|229490440|ref|ZP_04384281.1| ubiquinol-cytochrome c reductase... 442 6e-122 gi|317506582|ref|ZP_07964374.1| Rieske domain-containing protein... 440 2e-121 gi|326382514|ref|ZP_08204205.1| Rieske (2Fe-2S) iron-sulfur doma... 439 4e-121 gi|333918950|ref|YP_004492531.1| Ubiquinol-cytochrome c reductas... 433 2e-119 gi|29365474|dbj|BAC66447.1| Fe-S protein of cytochrome c reducta... 414 1e-113 gi|237785312|ref|YP_002906017.1| ubiquinol-cytochrome c reductas... 408 8e-112 gi|38234200|ref|NP_939967.1| ubiquinol-cytochrome C reductase ir... 402 5e-110 gi|213965204|ref|ZP_03393401.1| ubiquinol-cytochrome C reductase... 402 6e-110 gi|255325370|ref|ZP_05366476.1| menaquinol-cytochrome c reductas... 400 2e-109 gi|227503252|ref|ZP_03933301.1| ubiquinol-cytochrome C reductase... 399 4e-109 gi|306836519|ref|ZP_07469490.1| ubiquinol-cytochrome C reductase... 399 5e-109 gi|319950680|ref|ZP_08024581.1| ubiquinol-cytochrome c reductase... 399 7e-109 gi|256375513|ref|YP_003099173.1| Rieske (2Fe-2S) domain-containi... 397 2e-108 gi|227488503|ref|ZP_03918819.1| ubiquinol-cytochrome C reductase... 396 3e-108 gi|340794100|ref|YP_004759563.1| ubiquinol-cytochrome C reductas... 395 5e-108 gi|344044860|gb|EGV40535.1| hypothetical protein CgS9114_08126 [... 394 1e-107 gi|145296152|ref|YP_001138973.1| hypothetical protein cgR_2072 [... 394 1e-107 gi|225021889|ref|ZP_03711081.1| hypothetical protein CORMATOL_01... 394 2e-107 gi|19553392|ref|NP_601394.1| Rieske Fe-S protein [Corynebacteriu... 393 3e-107 >gi|15609332|ref|NP_216711.1| Rieske iron-sulfur protein QcrA [Mycobacterium tuberculosis H37Rv] gi|15841686|ref|NP_336723.1| iron-sulfur protein, putative [Mycobacterium tuberculosis CDC1551] gi|148662012|ref|YP_001283535.1| putative iron-sulfur protein [Mycobacterium tuberculosis H37Ra] 45 more sequence titles Length=429 Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ Sbjct 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT Sbjct 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 Query 421 PAFWERTTT 429 PAFWERTTT Sbjct 421 PAFWERTTT 429 >gi|340627200|ref|YP_004745652.1| putative Rieske iron-sulfur protein QcrA [Mycobacterium canettii CIPT 140010059] gi|340005390|emb|CCC44549.1| putative Rieske iron-sulfur protein QcrA [Mycobacterium canettii CIPT 140010059] Length=429 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 428/429 (99%), Gaps = 0/429 (0%) Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 MSRADDDAVGVPP CGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ Sbjct 1 MSRADDDAVGVPPACGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT Sbjct 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 Query 421 PAFWERTTT 429 PAFWERTTT Sbjct 421 PAFWERTTT 429 >gi|31793374|ref|NP_855867.1| Rieske iron-sulfur protein QcrA [Mycobacterium bovis AF2122/97] gi|121638076|ref|YP_978300.1| putative Rieske iron-sulfur protein QcrA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990570|ref|YP_002645257.1| putative Rieske iron-sulfur protein [Mycobacterium bovis BCG str. Tokyo 172] gi|62901006|sp|Q7TYX4.1|QCRA_MYCBO RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit; AltName: Full=Rieske iron-sulfur protein gi|31618966|emb|CAD97071.1| Probable Rieske iron-sulfur protein QcrA [Mycobacterium bovis AF2122/97] gi|121493724|emb|CAL72199.1| Probable Rieske iron-sulfur protein QcrA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773683|dbj|BAH26489.1| putative Rieske iron-sulfur protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602114|emb|CCC64788.1| probable Rieske iron-sulfur protein QcrA [Mycobacterium bovis BCG str. Moreau RDJ] Length=429 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ Sbjct 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPED+DAGGMETVFPWRESDGDGT Sbjct 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDIDAGGMETVFPWRESDGDGT 300 Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 Query 421 PAFWERTTT 429 PAFWERTTT Sbjct 421 PAFWERTTT 429 >gi|254232348|ref|ZP_04925675.1| rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis C] gi|124601407|gb|EAY60417.1| rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis C] Length=429 Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 428/429 (99%), Gaps = 0/429 (0%) Query 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ Sbjct 1 MSRADDDAVGVPPTCGGRSDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQ 60 Query 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE Sbjct 61 ELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWE 120 Query 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID Sbjct 121 FKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREID 180 Query 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG Sbjct 181 RKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEG 240 Query 241 KKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 KKAVLWTSGWTP YQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT Sbjct 241 KKAVLWTSGWTPCYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGT 300 Query 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS Sbjct 301 TVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPS 360 Query 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG Sbjct 361 SLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVG 420 Query 421 PAFWERTTT 429 PAFWERTTT Sbjct 421 PAFWERTTT 429 >gi|308232065|ref|ZP_07663992.1| Rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis SUMu001] gi|308372168|ref|ZP_07667315.1| Rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis SUMu004] gi|308377939|ref|ZP_07668630.1| Rieske iron-sulfur protein qcrA [Mycobacterium tuberculosis SUMu009] 8 more sequence titles Length=403 Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%) Query 27 VPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGT 86 +PGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGT Sbjct 1 MPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGT 60 Query 87 KAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLS 146 KAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLS Sbjct 61 KAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLS 120 Query 147 ILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLS 206 ILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLS Sbjct 121 ILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLS 180 Query 207 FGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG 266 FGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG Sbjct 181 FGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG 240 Query 267 TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKP 326 TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKP Sbjct 241 TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKP 300 Query 327 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK 386 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK Sbjct 301 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK 360 Query 387 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT Sbjct 361 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 403 >gi|240168254|ref|ZP_04746913.1| Rieske iron-sulfur protein qcrA [Mycobacterium kansasii ATCC 12478] Length=413 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/396 (87%), Positives = 368/396 (93%), Gaps = 0/396 (0%) Query 34 DGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAE 93 D D KA A EPDEAALAAMS QELL LGGKLDGV+IAYKEPRWPVEGTKAEKRAE Sbjct 18 DTGSDTDKAPAAAHEPDEAALAAMSQQELLDLGGKLDGVQIAYKEPRWPVEGTKAEKRAE 77 Query 94 RSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIG 153 R VAVWLLLGG FGLALLL+FLFWPW++KA+ F+YSL TPLYGLTFGLSIL+IAIG Sbjct 78 RGVAVWLLLGGAFGLALLLVFLFWPWQYKASGESGSFLYSLATPLYGLTFGLSILAIAIG 137 Query 154 AVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGA 213 AVL+QKRFIPEEI+IQ+RHDGASREIDRKTVVANLTDAFE STIRRRKL+GLS G+G+GA Sbjct 138 AVLFQKRFIPEEITIQDRHDGASREIDRKTVVANLTDAFESSTIRRRKLVGLSLGMGLGA 197 Query 214 FGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPF 273 FGLGTLVAFAGGLIKNPWKPVVPTAEG KA LWTSGWTPRY+GETIYLARATG DGPPF Sbjct 198 FGLGTLVAFAGGLIKNPWKPVVPTAEGMKAELWTSGWTPRYKGETIYLARATGLHDGPPF 257 Query 274 IKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVV 333 IK+RPEDMDAGGMETVFPWRESDGDGTTVESH KLQ IAMGIRNPVMLIRIKPSDLG++V Sbjct 258 IKLRPEDMDAGGMETVFPWRESDGDGTTVESHEKLQAIAMGIRNPVMLIRIKPSDLGKMV 317 Query 334 KRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAA 393 KR+GQESFNFGEFFA+TKVCSHLGCP+SLYEQQ+YRILCPCHQSQFDALHFAKPIFGPAA Sbjct 318 KRQGQESFNFGEFFAYTKVCSHLGCPASLYEQQTYRILCPCHQSQFDALHFAKPIFGPAA 377 Query 394 RALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 RALAQLPITID++GY VANGDFVEPVGPAFWERTT+ Sbjct 378 RALAQLPITIDSNGYFVANGDFVEPVGPAFWERTTS 413 >gi|289745468|ref|ZP_06504846.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium tuberculosis 02_1987] gi|289685996|gb|EFD53484.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium tuberculosis 02_1987] Length=383 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/353 (99%), Positives = 350/353 (99%), Gaps = 0/353 (0%) Query 77 KEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTT 136 K P PVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTT Sbjct 31 KSPAGPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTT 90 Query 137 PLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGST 196 PLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGST Sbjct 91 PLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGST 150 Query 197 IRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG 256 IRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG Sbjct 151 IRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG 210 Query 257 ETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIR 316 ETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIR Sbjct 211 ETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIR 270 Query 317 NPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQ 376 NPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQ Sbjct 271 NPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQ 330 Query 377 SQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 SQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT Sbjct 331 SQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 383 >gi|183983230|ref|YP_001851521.1| Rieske iron-sulfur protein QcrA [Mycobacterium marinum M] gi|183176556|gb|ACC41666.1| Rieske iron-sulfur protein QcrA [Mycobacterium marinum M] Length=394 Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/392 (85%), Positives = 363/392 (93%), Gaps = 0/392 (0%) Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97 DG+ T V REPDEAALA MS QELL LGG +DGVRIA+KEPRWPVEGTKAEKRAER VA Sbjct 3 DGSTETGVSREPDEAALAEMSQQELLELGGSIDGVRIAHKEPRWPVEGTKAEKRAERGVA 62 Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157 +WLLLGG FGLALLL+FLFWPWE+K + + + +YSL TPLYGLTFG+S+L+IAIGAVL+ Sbjct 63 LWLLLGGFFGLALLLVFLFWPWEYKPSGDKGNLLYSLATPLYGLTFGMSVLAIAIGAVLF 122 Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217 QKRFIPEEI+IQ+RHDGASRE+DRKTVVANL DAFE STI RRK++G S GVG+GAFGLG Sbjct 123 QKRFIPEEITIQDRHDGASREVDRKTVVANLADAFEASTIGRRKMVGASLGVGLGAFGLG 182 Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277 TLVAFAGGLIKNPWKPVVPTA+GKKAVLWTSGWTPR+ GETIYLARATG DGPP+ KMR Sbjct 183 TLVAFAGGLIKNPWKPVVPTADGKKAVLWTSGWTPRFHGETIYLARATGLGDGPPYTKMR 242 Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 PED+DAGGMETVFPWRESDGDGTTVESH KLQ I+MG+RNPVMLIRIKP+D+ RVVKR+G Sbjct 243 PEDLDAGGMETVFPWRESDGDGTTVESHEKLQRISMGVRNPVMLIRIKPTDMHRVVKRQG 302 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFNFGE FAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA Sbjct 303 QESFNFGELFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 362 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 QLPITIDT+GYLVANGDF+EPVGPAFWERTT+ Sbjct 363 QLPITIDTEGYLVANGDFIEPVGPAFWERTTS 394 >gi|118618837|ref|YP_907169.1| Rieske iron-sulfur protein QcrA [Mycobacterium ulcerans Agy99] gi|118570947|gb|ABL05698.1| Rieske iron-sulfur protein QcrA [Mycobacterium ulcerans Agy99] Length=394 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/392 (85%), Positives = 363/392 (93%), Gaps = 0/392 (0%) Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97 DG+ T V REPDEAALA MS QELL LGG +DGVRIA+KEPRWPVEGTKAEKRAER VA Sbjct 3 DGSTETGVSREPDEAALAEMSQQELLELGGSIDGVRIAHKEPRWPVEGTKAEKRAERGVA 62 Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157 +WLLLGG FGLALLL+FLFWPWE+K + + + +YSL TPLYGLTFG+S+L+IAIGAVL+ Sbjct 63 LWLLLGGFFGLALLLVFLFWPWEYKPSGDKGNLLYSLATPLYGLTFGMSVLAIAIGAVLF 122 Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217 QKRFIPEEI+IQ+RHDGASRE+DRKTVVANL DAFE STI RRK++G S GVG+GAFGLG Sbjct 123 QKRFIPEEITIQDRHDGASREVDRKTVVANLADAFEASTIGRRKMVGASLGVGLGAFGLG 182 Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277 TLVAFAGGLIKNPWKPVVPTA+GKKAVLWTSGWTPR+ GETIYLARATG DGPP+ KMR Sbjct 183 TLVAFAGGLIKNPWKPVVPTADGKKAVLWTSGWTPRFHGETIYLARATGLGDGPPYAKMR 242 Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 PED+DAGGMETVFPWRESDGDGTTVESH KLQ I+MG+RNPVMLIRIKP+D+ RVVKR+G Sbjct 243 PEDLDAGGMETVFPWRESDGDGTTVESHEKLQRISMGVRNPVMLIRIKPTDMHRVVKRQG 302 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFNFGE FAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA Sbjct 303 QESFNFGELFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 362 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 QLPITIDT+GYLVANGDF+EPVGPAFWERTT+ Sbjct 363 QLPITIDTEGYLVANGDFIEPVGPAFWERTTS 394 >gi|342859905|ref|ZP_08716558.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA [Mycobacterium colombiense CECT 3035] gi|342133037|gb|EGT86257.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA [Mycobacterium colombiense CECT 3035] Length=403 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/411 (79%), Positives = 361/411 (88%), Gaps = 9/411 (2%) Query 19 SDEEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKE 78 SD++ R G NP + REPD+AALAAMS QEL+ALGGKLDGV +KE Sbjct 2 SDQDVRGSDTGGNPHGTGE---------REPDDAALAAMSQQELVALGGKLDGVDTVFKE 52 Query 79 PRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPL 138 PRWP+EGTKAEKRAER VA+WLLLGG FGLALLLIFLFWPWE+K + F+Y LTTPL Sbjct 53 PRWPIEGTKAEKRAERGVALWLLLGGFFGLALLLIFLFWPWEYKPKESAGSFLYDLTTPL 112 Query 139 YGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIR 198 YGLTFG++ILSI IG +LYQKRFIPEEISIQ+RHDGASR++DRKTVVANL DA++GST+ Sbjct 113 YGLTFGMAILSIGIGVILYQKRFIPEEISIQDRHDGASRDVDRKTVVANLADAYQGSTVG 172 Query 199 RRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGET 258 RRKLIGLS G+G+GAFGL TLVAFAGGLIKNPWKPVVPTA+GKKAVLWTSGW+PRY GET Sbjct 173 RRKLIGLSLGMGLGAFGLSTLVAFAGGLIKNPWKPVVPTADGKKAVLWTSGWSPRYHGET 232 Query 259 IYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNP 318 I+LARATG+ PF+KMRPED+DAGGMETVFPWRESDGDGTT ES KL+ I G+RNP Sbjct 233 IFLARATGSASTSPFVKMRPEDLDAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNP 292 Query 319 VMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQ 378 VMLIR++P+D+ RVVKR+GQESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQ Sbjct 293 VMLIRVRPTDMNRVVKRQGQESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQ 352 Query 379 FDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 FDALHFAKPIFGPAARALAQLPITID++GYLVANGDFVEPVGPAFWERTTT Sbjct 353 FDALHFAKPIFGPAARALAQLPITIDSNGYLVANGDFVEPVGPAFWERTTT 403 >gi|108800259|ref|YP_640456.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. MCS] gi|119869387|ref|YP_939339.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. KMS] gi|126435882|ref|YP_001071573.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. JLS] gi|108770678|gb|ABG09400.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor [Mycobacterium sp. MCS] gi|119695476|gb|ABL92549.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor [Mycobacterium sp. KMS] gi|126235682|gb|ABN99082.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor [Mycobacterium sp. JLS] Length=414 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/415 (77%), Positives = 356/415 (86%), Gaps = 6/415 (1%) Query 19 SDEEERRIVPGPNPQDGAKDGAKATA---VPREPDEAALAAMSNQELLALGGKLDGVRIA 75 SDE V N DGA G A VP +P +A LAAMS +EL+ LGG+LDGV Sbjct 2 SDERNEEQVT--NTPDGAPKGTDAPGHGGVPGQPTDAELAAMSREELVELGGRLDGVETV 59 Query 76 YKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLT 135 +KEPRWPV GT+AEKRAERSVA WLL+GGV GLALL++FLFWPWE++ E +F+YSL Sbjct 60 FKEPRWPVPGTRAEKRAERSVATWLLIGGVSGLALLVVFLFWPWEYQPYGSEGEFLYSLA 119 Query 136 TPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGS 195 TPLYGL FGLSIL+I IGAVLYQKRFIPEEISIQ+RHDGAS EI RKT ANLTDA EGS Sbjct 120 TPLYGLLFGLSILAIGIGAVLYQKRFIPEEISIQDRHDGASPEIQRKTAAANLTDALEGS 179 Query 196 TIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQ 255 TI+RRK+IG+S GVG+GAFGLGT VAF GGLIKNPWKPVVPTA+G KAVLWTSGWTPR+ Sbjct 180 TIKRRKMIGVSLGVGLGAFGLGTAVAFIGGLIKNPWKPVVPTADGPKAVLWTSGWTPRFT 239 Query 256 GETIYLARATG-TEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMG 314 GETI+LARATG T GP F KMRPED+DAGGMETV+PWRESDGDGTTVESHHK+ EI MG Sbjct 240 GETIFLARATGNTGHGPTFAKMRPEDLDAGGMETVYPWRESDGDGTTVESHHKMTEIIMG 299 Query 315 IRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPC 374 +RNPVMLIR++P ++ +VVKRKGQESFNFGEFFA+TK+CSHLGCPSSLYEQQ++RILCPC Sbjct 300 VRNPVMLIRLRPEEMTKVVKRKGQESFNFGEFFAYTKICSHLGCPSSLYEQQTHRILCPC 359 Query 375 HQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 HQSQFDALHFAKPIFGPAARALAQLPITID DGYLVANGDF+EPVGPAFWER T+ Sbjct 360 HQSQFDALHFAKPIFGPAARALAQLPITIDQDGYLVANGDFIEPVGPAFWERKTS 414 >gi|120404530|ref|YP_954359.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957348|gb|ABM14353.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor [Mycobacterium vanbaalenii PYR-1] Length=402 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/391 (80%), Positives = 341/391 (88%), Gaps = 0/391 (0%) Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97 D T P +P +A LA MS +ELL LGGKLDGV I YKEPRWPV GTKAEKRAER+VA Sbjct 12 DAPGQTGAPGQPTDAELAKMSQEELLELGGKLDGVEIVYKEPRWPVPGTKAEKRAERTVA 71 Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157 W LL G GLALLLIFLFWPWE+K E +F+YSLTTPLYGLTFGLS+L+I +GAVL+ Sbjct 72 YWFLLAGFSGLALLLIFLFWPWEYKPFGDEGEFLYSLTTPLYGLTFGLSVLAIGVGAVLF 131 Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217 QK+FIPEEISIQERHDG S E+ RKTV ANL DA +GSTI+RRK+IGLS G+G GAFGLG Sbjct 132 QKKFIPEEISIQERHDGRSPELHRKTVAANLGDALDGSTIKRRKMIGLSLGIGFGAFGLG 191 Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277 T VAF GGLIKNPWKPVVPTAEG KAVLWTSGWTPR+ GETIYLARATG P++KMR Sbjct 192 TAVAFIGGLIKNPWKPVVPTAEGPKAVLWTSGWTPRFHGETIYLARATGKPGESPYVKMR 251 Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 PED+DAGGMETV+PWRESDGDGTTVES H L EIAMG+RNPVMLIRIKP+D+ RVVKR+G Sbjct 252 PEDLDAGGMETVYPWRESDGDGTTVESEHHLFEIAMGVRNPVMLIRIKPADMKRVVKRRG 311 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFNFGE FA+TKVCSHLGCPSSLYEQQ+YRILCPCHQSQFDALHFAKPIFGPAARALA Sbjct 312 QESFNFGELFAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALHFAKPIFGPAARALA 371 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 QLPITID DGYLVANGDF+EPVGPAFWER + Sbjct 372 QLPITIDQDGYLVANGDFIEPVGPAFWERKS 402 >gi|118466759|ref|YP_881501.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA [Mycobacterium avium 104] gi|254774970|ref|ZP_05216486.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit QcrA [Mycobacterium avium subsp. avium ATCC 25291] gi|118168046|gb|ABK68943.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit QcrA [Mycobacterium avium 104] Length=401 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/392 (84%), Positives = 351/392 (90%), Gaps = 0/392 (0%) Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97 D K P EPDEAALAAMS QEL+ LGGKLDGV +KEPRWPVEGTKAEKRAER VA Sbjct 10 DTDKGAGAPNEPDEAALAAMSQQELVTLGGKLDGVETVFKEPRWPVEGTKAEKRAERGVA 69 Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157 +WLLLGG FGLALLLIFLFWPWE+K + F+Y L TPLYGLTFG+SILSI IG +LY Sbjct 70 LWLLLGGGFGLALLLIFLFWPWEYKPKEAAGSFLYDLATPLYGLTFGMSILSIGIGTILY 129 Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217 QKRFIPEEISIQERHDGASREIDRKTVVANL DA+ GSTI RRK++GLS GVG+GAFGL Sbjct 130 QKRFIPEEISIQERHDGASREIDRKTVVANLADAYNGSTIGRRKMVGLSLGVGLGAFGLS 189 Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277 TLVAFAGGLIKNPWKPVVPTA GKKAVLWTSGWTPRY GETIYLARATGT G PF+KMR Sbjct 190 TLVAFAGGLIKNPWKPVVPTANGKKAVLWTSGWTPRYPGETIYLARATGTYTGAPFVKMR 249 Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 PED+DAGGMETVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+G Sbjct 250 PEDLDAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMPRVVKRQG 309 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALA Sbjct 310 QESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALA 369 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 QLPITIDT+GYLVANGDFVEPVGPAFWERTTT Sbjct 370 QLPITIDTNGYLVANGDFVEPVGPAFWERTTT 401 >gi|41408032|ref|NP_960868.1| QcrA [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396387|gb|AAS04251.1| QcrA [Mycobacterium avium subsp. paratuberculosis K-10] Length=422 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/392 (83%), Positives = 350/392 (90%), Gaps = 0/392 (0%) Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97 D K P EPDEAALAAMS QEL+ LGGKLDGV +KEPRWPVE TKAEKRAER VA Sbjct 31 DTDKGAGAPNEPDEAALAAMSQQELVTLGGKLDGVETVFKEPRWPVEDTKAEKRAERGVA 90 Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157 +WLLLGG FGLALLLIFLFWPWE+K + F+Y L TPLYGLTFG+SILSI IG +LY Sbjct 91 LWLLLGGGFGLALLLIFLFWPWEYKPKEAAGSFLYDLATPLYGLTFGMSILSIGIGTILY 150 Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217 QKRFIPEEISIQ+RHDGASREIDRKTVVANL DA+ GSTI RRK++GLS GVG+GAFGL Sbjct 151 QKRFIPEEISIQQRHDGASREIDRKTVVANLADAYNGSTIGRRKMVGLSLGVGLGAFGLS 210 Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277 TLVAFAGGLIKNPWKPVVPTA GKKAVLWTSGWTPRY GETIYLARATGT G PF+KMR Sbjct 211 TLVAFAGGLIKNPWKPVVPTANGKKAVLWTSGWTPRYPGETIYLARATGTYTGAPFVKMR 270 Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 PED+DAGGMETVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+G Sbjct 271 PEDLDAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMPRVVKRQG 330 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALA Sbjct 331 QESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALA 390 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 QLPITIDT+GYLVANGDFVEPVGPAFWERTTT Sbjct 391 QLPITIDTNGYLVANGDFVEPVGPAFWERTTT 422 >gi|336461918|gb|EGO40771.1| Rieske Fe-S protein [Mycobacterium avium subsp. paratuberculosis S397] Length=401 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/392 (83%), Positives = 350/392 (90%), Gaps = 0/392 (0%) Query 38 DGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVA 97 D K P EPDEAALAAMS QEL+ LGGKLDGV +KEPRWPVE TKAEKRAER VA Sbjct 10 DTDKGAGAPNEPDEAALAAMSQQELVTLGGKLDGVETVFKEPRWPVEDTKAEKRAERGVA 69 Query 98 VWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLY 157 +WLLLGG FGLALLLIFLFWPWE+K + F+Y L TPLYGLTFG+SILSI IG +LY Sbjct 70 LWLLLGGGFGLALLLIFLFWPWEYKPKEAAGSFLYDLATPLYGLTFGMSILSIGIGTILY 129 Query 158 QKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLG 217 QKRFIPEEISIQ+RHDGASREIDRKTVVANL DA+ GSTI RRK++GLS GVG+GAFGL Sbjct 130 QKRFIPEEISIQQRHDGASREIDRKTVVANLADAYNGSTIGRRKMVGLSLGVGLGAFGLS 189 Query 218 TLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMR 277 TLVAFAGGLIKNPWKPVVPTA GKKAVLWTSGWTPRY GETIYLARATGT G PF+KMR Sbjct 190 TLVAFAGGLIKNPWKPVVPTANGKKAVLWTSGWTPRYPGETIYLARATGTYTGAPFVKMR 249 Query 278 PEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 PED++AGGMETVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+G Sbjct 250 PEDLEAGGMETVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMPRVVKRQG 309 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFNFGEFFA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALA Sbjct 310 QESFNFGEFFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALA 369 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWERTTT 429 QLPITIDT+GYLVANGDFVEPVGPAFWERTTT Sbjct 370 QLPITIDTNGYLVANGDFVEPVGPAFWERTTT 401 >gi|145223541|ref|YP_001134219.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315443887|ref|YP_004076766.1| Rieske Fe-S protein [Mycobacterium sp. Spyr1] gi|145216027|gb|ABP45431.1| menaquinol-cytochrome c reductase iron-sulfur subunit precursor [Mycobacterium gilvum PYR-GCK] gi|315262190|gb|ADT98931.1| Rieske Fe-S protein [Mycobacterium sp. Spyr1] Length=406 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/403 (76%), Positives = 345/403 (86%), Gaps = 3/403 (0%) Query 29 GPNPQDGAKDGAKA---TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEG 85 GP+ ++G + G P +P +A LA MS +ELL LGG+LDGV I +KEPRWP+ G Sbjct 4 GPDDRNGPEKGTDVPGHKGEPGQPTDAELAKMSQEELLELGGRLDGVEIVHKEPRWPIPG 63 Query 86 TKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGL 145 TKAEKRAER+VA W LL G GLALLLIFLFWPWE+K +F+YSLTTPLYGLTFGL Sbjct 64 TKAEKRAERTVAYWFLLAGFSGLALLLIFLFWPWEYKPYGSGGEFLYSLTTPLYGLTFGL 123 Query 146 SILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGL 205 S+L+I +GAVL+QK+FIPEEISIQ+RHDG S E+ RKT+ ANL DA +GSTI+RRK+IGL Sbjct 124 SVLAIGVGAVLFQKKFIPEEISIQDRHDGRSPELHRKTIAANLGDALDGSTIKRRKMIGL 183 Query 206 SFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARAT 265 S G+G GAFGLGT VAF GGLIKNPWKPVVPTAEG KAVLWTSGWTPR++GETI+LARAT Sbjct 184 SLGIGFGAFGLGTAVAFIGGLIKNPWKPVVPTAEGMKAVLWTSGWTPRFEGETIFLARAT 243 Query 266 GTEDGPPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIK 325 G PF+KMRPED+DAGGMETV+PWRESDGDGTTVES H L +I MG+RNPVMLIRIK Sbjct 244 GRPGNSPFVKMRPEDLDAGGMETVYPWRESDGDGTTVESEHHLYDIVMGVRNPVMLIRIK 303 Query 326 PSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFA 385 P D+ RVVKR+GQESFNFGE FA+TKVCSHLGCPSSLYEQQ+YRILCPCHQSQFDALHFA Sbjct 304 PGDMSRVVKRRGQESFNFGELFAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALHFA 363 Query 386 KPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 KPIFGPAARALAQLPITID DGYLVANGDF+EPVGPAFWER + Sbjct 364 KPIFGPAARALAQLPITIDQDGYLVANGDFIEPVGPAFWERKS 406 >gi|333990348|ref|YP_004522962.1| Rieske iron-sulfur protein QcrA [Mycobacterium sp. JDM601] gi|333486316|gb|AEF35708.1| Rieske iron-sulfur protein QcrA [Mycobacterium sp. JDM601] Length=390 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/388 (79%), Positives = 339/388 (88%), Gaps = 3/388 (0%) Query 41 KATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWL 100 K TA+P D A LAAM+ +ELLALGG++DGV +KEPRWPVEGT+AEKRAERSVA W Sbjct 6 KDTAIP---DGAELAAMNTEELLALGGRIDGVETIFKEPRWPVEGTRAEKRAERSVAGWF 62 Query 101 LLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKR 160 L G FGLALLLIF+FWPWE+ + D F YSL TPLYGLTFGLS+L + IGAV++ K+ Sbjct 63 LAAGGFGLALLLIFVFWPWEYASVDSAGGFAYSLATPLYGLTFGLSVLLLGIGAVMFVKK 122 Query 161 FIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLV 220 FIPEEI+IQERHDG+S E+DRKTV A LTDAFEGSTI RRKL+G S G+G GAFGLGTLV Sbjct 123 FIPEEITIQERHDGSSAELDRKTVAAQLTDAFEGSTIGRRKLLGASLGIGFGAFGLGTLV 182 Query 221 AFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPED 280 A AGGLIKNPWKPVV TAEGKKA+LWTSGWTPRY GETIYLARATG PFIKMRPED Sbjct 183 AGAGGLIKNPWKPVVDTAEGKKAMLWTSGWTPRYHGETIYLARATGHSTNSPFIKMRPED 242 Query 281 MDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQES 340 +DAGGMETVFPWRESDGDGTT ES KL EI MG+RNPVMLIRI+P D+ VVKRKGQES Sbjct 243 LDAGGMETVFPWRESDGDGTTEESREKLTEIMMGVRNPVMLIRIRPDDMPNVVKRKGQES 302 Query 341 FNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLP 400 FNFG+FFA+TK+CSHLGCPSSL+EQQ+YRILCPCHQSQFDALHFAKP+FGPAARALAQLP Sbjct 303 FNFGDFFAYTKICSHLGCPSSLFEQQTYRILCPCHQSQFDALHFAKPVFGPAARALAQLP 362 Query 401 ITIDTDGYLVANGDFVEPVGPAFWERTT 428 ITIDT+GYLVANGDFVEPVGPAFWERT+ Sbjct 363 ITIDTNGYLVANGDFVEPVGPAFWERTS 390 >gi|15827403|ref|NP_301666.1| Rieske iron-sulphur reductase component [Mycobacterium leprae TN] gi|221229880|ref|YP_002503296.1| putative Rieske iron-sulphur reductase component [Mycobacterium leprae Br4923] gi|13092953|emb|CAC31261.1| putative Rieske iron-sulphur reductase component [Mycobacterium leprae] gi|219932987|emb|CAR70975.1| putative Rieske iron-sulphur reductase component [Mycobacterium leprae Br4923] Length=394 Score = 633 bits (1633), Expect = 2e-179, Method: Compositional matrix adjust. Identities = 320/398 (81%), Positives = 343/398 (87%), Gaps = 7/398 (1%) Query 31 NPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEK 90 NP+DGA RE DE MS +EL+ALGG+LDGV YKE RWP+EGTKAEK Sbjct 4 NPKDGA-------GASRELDETTQGTMSREELVALGGRLDGVNTVYKEQRWPIEGTKAEK 56 Query 91 RAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSI 150 R ER V WLLLGGV GL LLLIFLFWPWE+K + F+Y++ TPLYGLTFGLSIL+I Sbjct 57 RTERMVTFWLLLGGVLGLTLLLIFLFWPWEYKPKEASGSFLYTIATPLYGLTFGLSILAI 116 Query 151 AIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVG 210 AIGAV +QKRFIPEEISIQERHDGAS EIDRKTVVANLTDA E STIRRRKLIGLS GVG Sbjct 117 AIGAVQFQKRFIPEEISIQERHDGASPEIDRKTVVANLTDALESSTIRRRKLIGLSLGVG 176 Query 211 MGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDG 270 +GAFGL TLV F GG IKNPWKPVVPTA G KA+LWTSGWTPRY GETIYLARATG+ G Sbjct 177 LGAFGLSTLVTFIGGFIKNPWKPVVPTANGMKAMLWTSGWTPRYHGETIYLARATGSHSG 236 Query 271 PPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLG 330 PFI+MRPED+DAGGMETVFPWRESDGDGTT+ESH KL I MGIRNPVMLIRI+PSD+ Sbjct 237 APFIRMRPEDVDAGGMETVFPWRESDGDGTTMESHEKLITIKMGIRNPVMLIRIRPSDMP 296 Query 331 RVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFG 390 RVVKR+GQE+FNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDAL +AKPIFG Sbjct 297 RVVKRRGQENFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALQYAKPIFG 356 Query 391 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT Sbjct 357 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 394 >gi|118473759|ref|YP_888539.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Mycobacterium smegmatis str. MC2 155] gi|118175046|gb|ABK75942.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium smegmatis str. MC2 155] Length=408 Score = 631 bits (1627), Expect = 8e-179, Method: Compositional matrix adjust. Identities = 312/398 (79%), Positives = 347/398 (88%), Gaps = 0/398 (0%) Query 31 NPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEK 90 +P D T VP +P +A LA MS +EL+ LGGK+DGV +KEPRWPV GTKAEK Sbjct 11 SPDIKGTDAPGQTGVPGQPTDAELAEMSREELVKLGGKIDGVETIFKEPRWPVPGTKAEK 70 Query 91 RAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSI 150 R ER VA WL+LGG+ GLALLL+FLFWPWE++ E +F+YSL TPLYGLTFGLSILSI Sbjct 71 RTERLVAYWLMLGGLSGLALLLVFLFWPWEYQPFGSEGEFLYSLATPLYGLTFGLSILSI 130 Query 151 AIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVG 210 IGAVL+QK+FIPEEIS+Q+RHDG S E+ RKTV ANLTDA EGST++RRK+IGLS G+G Sbjct 131 GIGAVLFQKKFIPEEISVQDRHDGRSPEVHRKTVAANLTDALEGSTLKRRKVIGLSLGIG 190 Query 211 MGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDG 270 +GAFG GTLVAF GGLIKNPWKPVVPTAEGKKAVLWTSGWTPR++GETIYLARATG Sbjct 191 LGAFGAGTLVAFIGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRFKGETIYLARATGRPGE 250 Query 271 PPFIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLG 330 PF+KMRPED+DAGGMETVFPWRESDGDGTTVES HKL EIAMG+RNPVMLIRIKP+D+ Sbjct 251 SPFVKMRPEDIDAGGMETVFPWRESDGDGTTVESEHKLTEIAMGVRNPVMLIRIKPADMH 310 Query 331 RVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFG 390 RV+KRKGQESFNFGE FA+TKVCSHLGCPSSLYEQQ+YRILCPCHQSQFDAL FAKPIFG Sbjct 311 RVIKRKGQESFNFGELFAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALEFAKPIFG 370 Query 391 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 PAARALAQLPITID DGYLVANGDFVEPVGPAFWER + Sbjct 371 PAARALAQLPITIDEDGYLVANGDFVEPVGPAFWERKS 408 >gi|254822833|ref|ZP_05227834.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit QcrA [Mycobacterium intracellulare ATCC 13950] Length=414 Score = 625 bits (1612), Expect = 4e-177, Method: Compositional matrix adjust. Identities = 311/384 (81%), Positives = 343/384 (90%), Gaps = 1/384 (0%) Query 47 REPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVF 106 REPD+AALAAMS QEL+ALGGKLDGV +KE RWPVEGTKAEKRAER VA+WLLLGG Sbjct 31 REPDDAALAAMSQQELVALGGKLDGVETVFKENRWPVEGTKAEKRAERGVALWLLLGGGG 90 Query 107 GLALLL-IFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEE 165 LL IFLFWPWE+K + ++YSLTTPLYGLTFG+SILSI IG +LYQKRFIPEE Sbjct 91 FGLALLLIFLFWPWEYKPKEAADSWLYSLTTPLYGLTFGMSILSIGIGTILYQKRFIPEE 150 Query 166 ISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGG 225 ISIQ+RHDGASR++DRKTVVANL DA+ GSTI RRKL+GLS GVG+GAFGL TLVAFAGG Sbjct 151 ISIQDRHDGASRDVDRKTVVANLADAYSGSTIGRRKLVGLSLGVGLGAFGLSTLVAFAGG 210 Query 226 LIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGG 285 LIKNPWKPVV TA GKKAVL+TS WTPRY GETIYLARATG+ G PF+KMRPED+DAGG Sbjct 211 LIKNPWKPVVQTANGKKAVLFTSDWTPRYHGETIYLARATGSFAGSPFVKMRPEDIDAGG 270 Query 286 METVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGE 345 METVFPWRESDGDGTT ES KL+ I G+RNPVMLIRI+P+D+ RVVKR+GQESFNFGE Sbjct 271 METVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRIRPTDMHRVVKRQGQESFNFGE 330 Query 346 FFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 405 FA+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT Sbjct 331 LFAYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 390 Query 406 DGYLVANGDFVEPVGPAFWERTTT 429 +GYLVANGDF+EPVGPAFWERTT+ Sbjct 391 NGYLVANGDFIEPVGPAFWERTTS 414 >gi|296166063|ref|ZP_06848510.1| probable ubiquinol-cytochrome c reductase, iron-sulfur subunit QcrA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898584|gb|EFG78143.1| probable ubiquinol-cytochrome c reductase, iron-sulfur subunit QcrA [Mycobacterium parascrofulaceum ATCC BAA-614] Length=400 Score = 622 bits (1603), Expect = 4e-176, Method: Compositional matrix adjust. Identities = 320/382 (84%), Positives = 348/382 (92%), Gaps = 0/382 (0%) Query 48 EPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFG 107 EPDEAALAAMS QEL+ALGGKLDGV KEPRWPVEGTKAEKRAER VA+WLLLGG FG Sbjct 19 EPDEAALAAMSQQELVALGGKLDGVETIVKEPRWPVEGTKAEKRAERGVALWLLLGGGFG 78 Query 108 LALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEIS 167 LALLLIFLFWPWE+K +Y LTTPLYGLTFG+SILSIA+G +LYQKRFIPEEIS Sbjct 79 LALLLIFLFWPWEYKPKAAPGSLLYDLTTPLYGLTFGMSILSIAVGTILYQKRFIPEEIS 138 Query 168 IQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLI 227 IQERHDGASREIDRKTVVANLTDA +GST+RRRK+IG+S G+G+GAFGL TLVAFAGGLI Sbjct 139 IQERHDGASREIDRKTVVANLTDALDGSTVRRRKVIGMSLGLGLGAFGLSTLVAFAGGLI 198 Query 228 KNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGME 287 KNPWKPVVPTA GKKAVLWTSGWTPRY GETI+LARATG+ PFIKMRPED+DAGGME Sbjct 199 KNPWKPVVPTANGKKAVLWTSGWTPRYAGETIFLARATGSAGASPFIKMRPEDLDAGGME 258 Query 288 TVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFF 347 TVFPWRESDGDGTT ES KL+ I G+RNPVMLIR++PSD+ RVVKR+GQESFNFGE F Sbjct 259 TVFPWRESDGDGTTPESQEKLRAINQGVRNPVMLIRVRPSDMPRVVKRQGQESFNFGELF 318 Query 348 AFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDG 407 A+TKVCSHLGCP+SLYE+QSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT+G Sbjct 319 AYTKVCSHLGCPASLYEEQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTNG 378 Query 408 YLVANGDFVEPVGPAFWERTTT 429 YLVANGDF+EPVGPAFWERTT+ Sbjct 379 YLVANGDFIEPVGPAFWERTTS 400 >gi|169629054|ref|YP_001702703.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mycobacterium abscessus ATCC 19977] gi|169241021|emb|CAM62049.1| Probable ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) [Mycobacterium abscessus] Length=391 Score = 581 bits (1498), Expect = 8e-164, Method: Compositional matrix adjust. Identities = 275/384 (72%), Positives = 318/384 (83%), Gaps = 2/384 (0%) Query 46 PREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGV 105 P P + LAAMS EL+ LG LDGV I Y+EPRWPVEGTKAEKRAER VA+W LGGV Sbjct 9 PEIPSDEQLAAMSRDELVKLGTNLDGVEIVYREPRWPVEGTKAEKRAERLVALWFALGGV 68 Query 106 FGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEE 165 FGLALL +FLFWPWE+K + +Y+L TPLYGLT GLS+LS+ IGAVLY K+FIP+E Sbjct 69 FGLALLGVFLFWPWEYKPFGDPGNALYNLATPLYGLTLGLSVLSLGIGAVLYTKKFIPQE 128 Query 166 ISIQERHDG-ASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAG 224 ISIQ+RHDG S E+DRKT+VA L D + ST+ RRK+I + G G+GA G GT VAF G Sbjct 129 ISIQDRHDGPGSAEVDRKTIVAQLQDTLDTSTLPRRKMIVRALGFGVGAMGAGTAVAFIG 188 Query 225 GLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAG 284 G+IKNPW VVPTA GK+ VL TSGWTPRY GETIYL RA G+ +K+RPED+DAG Sbjct 189 GMIKNPWARVVPTANGKQPVLLTSGWTPRYHGETIYLGRAVGSSSNV-LLKIRPEDIDAG 247 Query 285 GMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFG 344 GMETVFPWRESDGDGTTVESH KL I MGIRNPVMLIR++P+D+ +VVKRKGQE+FN+G Sbjct 248 GMETVFPWRESDGDGTTVESHEKLSHIQMGIRNPVMLIRVRPTDMPKVVKRKGQENFNYG 307 Query 345 EFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITID 404 + FA+TK+CSHLGCP+SL+EQQ+YRILCPCHQSQFDALHFAKPIFGPAARALAQLP+T+D Sbjct 308 DLFAYTKICSHLGCPTSLFEQQTYRILCPCHQSQFDALHFAKPIFGPAARALAQLPLTVD 367 Query 405 TDGYLVANGDFVEPVGPAFWERTT 428 DGYLVANGDFVEPVGPAFWER + Sbjct 368 KDGYLVANGDFVEPVGPAFWERKS 391 >gi|343924167|ref|ZP_08763730.1| menaquinol-cytochrome c reductase iron-sulfur protein [Gordonia alkanivorans NBRC 16433] gi|343765972|dbj|GAA10656.1| menaquinol-cytochrome c reductase iron-sulfur protein [Gordonia alkanivorans NBRC 16433] Length=385 Score = 454 bits (1169), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 227/385 (59%), Positives = 272/385 (71%), Gaps = 13/385 (3%) Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108 P L MS +EL+ LG LDGV I ++ R+P GTK EKRAER VA+W + G+ L Sbjct 9 PSRDELEQMSTEELVKLGTNLDGVEIIHRAERYPEPGTKVEKRAERQVAIWFTIAGISAL 68 Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168 A L IFLF WEF D + + Y+ TPL G TFGLS+L+I I +L K+FIP EIS+ Sbjct 69 ACLGIFLFNHWEFALPDDPNYWWYTFNTPLLGATFGLSVLAIGIAMILITKKFIPSEISV 128 Query 169 QERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIK 228 Q+RHDG S EID+KT+V L D ST+ RRK++ S G G+GAF L LVAF GG IK Sbjct 129 QDRHDGGSAEIDKKTIVGLLQDTGTTSTLGRRKMLIGSAGFGLGAFALTGLVAFLGGFIK 188 Query 229 NPWKPVVPTAEGKKAVLWTSGWTPRYQ-----GETIYLARATGTEDGPPFIKMRPEDMDA 283 NPW AE + + LW SGW+P Y ETIYL R TG + RPED+DA Sbjct 189 NPW------AERENSPLWHSGWSPIYNSKADPNETIYLRRDTGNPYQVALV--RPEDLDA 240 Query 284 GGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNF 343 GGMETVFPWR S+G G T S H L E +RNPVMLIR++P D R +KR+GQESFN+ Sbjct 241 GGMETVFPWRRSNGFGETEHSRHALMESLHEVRNPVMLIRLRPEDAARAIKRQGQESFNY 300 Query 344 GEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITI 403 G++FAFTKVCSHLGCP+SLYEQ+S RILCPCHQSQFDAL +AKPIFGPAARALAQLPIT+ Sbjct 301 GDYFAFTKVCSHLGCPASLYEQRSNRILCPCHQSQFDALEYAKPIFGPAARALAQLPITV 360 Query 404 DTDGYLVANGDFVEPVGPAFWERTT 428 + +GYLVA GDF+EPVGPAFWER + Sbjct 361 NNEGYLVAAGDFIEPVGPAFWERKS 385 >gi|54023696|ref|YP_117938.1| putative cytochrome c component [Nocardia farcinica IFM 10152] gi|54015204|dbj|BAD56574.1| putative cytochrome c component [Nocardia farcinica IFM 10152] Length=394 Score = 451 bits (1161), Expect = 8e-125, Method: Compositional matrix adjust. Identities = 222/409 (55%), Positives = 290/409 (71%), Gaps = 18/409 (4%) Query 21 EEERRIVPGPNPQDGAKDGAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPR 80 E+ER + P +G + K P +P E L AM+ EL+ LG DGV + Y+ R Sbjct 3 EQERDV---SRPDEGPELSKKPVNPPVDPTEDELDAMTRDELVELGTARDGVEVVYRGER 59 Query 81 WPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYG 140 +PV GT+AEKRAER V W + G+ AL+ +FLFWPWEFK + + YSL TPL G Sbjct 60 FPVPGTRAEKRAERQVTFWFAVSGLAAAALIGVFLFWPWEFKGKNEDGHAAYSLFTPLVG 119 Query 141 LTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRR 200 LTFG+++L I I VL +K+FIP EISIQERHDG S E++R+T+ A L DA + ST+ RR Sbjct 120 LTFGIAVLVIGIAVVLIRKKFIPAEISIQERHDGPSPEVERRTLAAELQDALDTSTLGRR 179 Query 201 KLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIY 260 K+I + G G+G G+G L+ F GG++KNPW A+ +K+ LW SGWTP ++GET+Y Sbjct 180 KMITRTAGAGVGVLGIGALLVFVGGMVKNPW------AKREKSPLWVSGWTPDFEGETVY 233 Query 261 LARATGTEDGPPFIKMRPEDMDAGGMETVFPWRES-DGDGTTVESHHKLQEIAMGIRNPV 319 L R TG + + +RPED+DAG METVFPW+E GD SH LQ + GIRN V Sbjct 234 LRRDTGRPED--IVLVRPEDLDAGAMETVFPWKEKWRGD-----SHATLQSL-RGIRNAV 285 Query 320 MLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQF 379 MLIR++ D + +KRKGQESFNFG++FA++K+C+HLGCP+SLYEQQ+ RILCPCHQSQF Sbjct 286 MLIRLRTEDAEKAIKRKGQESFNFGDYFAYSKICTHLGCPTSLYEQQTNRILCPCHQSQF 345 Query 380 DALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 A + KPIFGPAARAL QLPIT++++G+LVANGDF+EP+GPAFWER + Sbjct 346 SATEWGKPIFGPAARALPQLPITVNSEGFLVANGDFIEPLGPAFWERRS 394 >gi|296393479|ref|YP_003658363.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180626|gb|ADG97532.1| Rieske (2Fe-2S) iron-sulfur domain protein [Segniliparus rotundus DSM 44985] Length=384 Score = 449 bits (1156), Expect = 4e-124, Method: Compositional matrix adjust. Identities = 224/384 (59%), Positives = 282/384 (74%), Gaps = 11/384 (2%) Query 48 EPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFG 107 +P L+ MS EL+ LG DGVR+ +++ RW V GT+AEKRAER VA WL+LGG+ Sbjct 9 DPTPEELSTMSRDELVTLGLAQDGVRLIHRQERWAVPGTRAEKRAERLVAFWLILGGLAA 68 Query 108 LALLLIFLFWPWEFKAADGESDF-IYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEI 166 +ALL +FLF WE+ A GES + Y+ TPL GLT G+SIL+I + A++Y KRFIPEEI Sbjct 69 IALLAVFLFGHWEY-AGPGESGYWAYTWETPLIGLTMGVSILAIGVAAIVYTKRFIPEEI 127 Query 167 SIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGL 226 ++Q+RHDG S+ +D+ T A L D+ E ST+ RR +I + FG V F GG Sbjct 128 AVQDRHDGGSKPLDKLTFGALLNDSLETSTLPRRTMIKRALIFSASVFGAAAGVFFIGGA 187 Query 227 IKNPWKPVVPTAEGKKAVLWTSGWTPRY--QGETIYLARATGTEDGPPFIKMRPEDMDAG 284 I+NPW A+G + LW +GWTPR + ETIYL R T +D ++PED+ +G Sbjct 188 IRNPW------AKGNDSDLWHTGWTPRKGEEHETIYLRRYT-PQDIYSVELVKPEDLASG 240 Query 285 GMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFG 344 GMETVFPWRESDG G T ES +L E GIRNPVMLIR++P D RVVKRKGQE+FNFG Sbjct 241 GMETVFPWRESDGKGETEESRERLFESFHGIRNPVMLIRLRPEDAARVVKRKGQENFNFG 300 Query 345 EFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITID 404 E++A+TKVCSH+GCP+SLYEQQ+ RILCPCHQSQFDALH+AKPIFGPAARALAQLPIT++ Sbjct 301 EYYAYTKVCSHVGCPTSLYEQQTNRILCPCHQSQFDALHYAKPIFGPAARALAQLPITVN 360 Query 405 TDGYLVANGDFVEPVGPAFWERTT 428 +GYL+ANGD++EPVGPAFWER + Sbjct 361 EEGYLIANGDYIEPVGPAFWERKS 384 >gi|111018145|ref|YP_701117.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus jostii RHA1] gi|110817675|gb|ABG92959.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus jostii RHA1] Length=380 Score = 447 bits (1150), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 222/389 (58%), Positives = 279/389 (72%), Gaps = 16/389 (4%) Query 39 GAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAV 98 G A P++ +A L +S EL+ LG LD V +A++ RW V GTKAEKRAERSVA Sbjct 5 GQPGGATPKKYTDAELENLSRDELVELGTNLDHVDVAFRRNRWAVPGTKAEKRAERSVAF 64 Query 99 WLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQ 158 W L G+ +A + I+LFWPWE+ A E YSL TPL GLT GL+IL + +GAV + Sbjct 65 WFALSGISAIAFIAIYLFWPWEYAGAGEEHYSAYSLYTPLIGLTMGLAILGLGVGAVQFT 124 Query 159 KRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGT 218 K+FIPEE+SIQ+RHDG S E+DRKT+VA L D+F+ ST+ RRKL+ + G GA G+ + Sbjct 125 KKFIPEEVSIQDRHDGGSSEVDRKTIVAELGDSFDTSTLGRRKLLKRTLIFGGGALGIMS 184 Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRP 278 ++ GGLIKNPW A+ + LW SGWTPRY+GETIYL R TG + + +RP Sbjct 185 VMPL-GGLIKNPW------AKRDDSPLWVSGWTPRYEGETIYLRRDTGRPED--VVLVRP 235 Query 279 EDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 ED+DAG METVFP+RESD GD H L E GIRN MLIR++ D RV KRKG Sbjct 236 EDLDAGAMETVFPFRESDRGD------HDALLEALRGIRNATMLIRLRTEDTARVTKRKG 289 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFN+G++FAF+K+C+HLGCP+SLYEQQ+ RILCPCHQSQFDAL + KPIFGPAARAL Sbjct 290 QESFNYGDYFAFSKICTHLGCPTSLYEQQTNRILCPCHQSQFDALTYGKPIFGPAARALP 349 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWER 426 QLPIT++ +G+LV GD++E +GPAFWER Sbjct 350 QLPITVNEEGFLVTTGDYIEALGPAFWER 378 >gi|226307084|ref|YP_002767044.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus erythropolis PR4] gi|226186201|dbj|BAH34305.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus erythropolis PR4] Length=380 Score = 447 bits (1150), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 224/389 (58%), Positives = 277/389 (72%), Gaps = 16/389 (4%) Query 39 GAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAV 98 G P++ + L AMS +L+ LG LDGV + Y+ RW V+GT+AEKRAER+VA Sbjct 5 GQHGGDTPKKYTDEELDAMSRDDLVKLGTNLDGVDVVYRRDRWSVKGTRAEKRAERNVAF 64 Query 99 WLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQ 158 W L GV +A + I+LFWPWE+ A E+ YSL TPL GLT GL+IL + IGAV + Sbjct 65 WFGLAGVSAIAFIAIYLFWPWEYAGAGDENYGKYSLYTPLIGLTMGLAILGVGIGAVQFT 124 Query 159 KRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGT 218 K+FIPEE+SIQ+RHDG S E+DR+T+VA L D + ST+ RRK I S G GA G+ Sbjct 125 KKFIPEEVSIQDRHDGGSTEVDRRTIVAELGDTLDTSTLPRRKAIKRSLMFGGGALGV-M 183 Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRP 278 +V GGLIKNPW A+G + LW SGWTP Y GETIYL R TG + + +RP Sbjct 184 MVMPLGGLIKNPW------AKGDDSPLWVSGWTPNYPGETIYLRRDTGRPE--DIVLVRP 235 Query 279 EDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 ED+DAG METVFP+RESD GD H L GIRN VMLIR++ D RV KRKG Sbjct 236 EDLDAGSMETVFPFRESDRGD------EHALLAALRGIRNSVMLIRLRTEDTARVTKRKG 289 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFN+G++FA++K+C+HLGCP+SLYEQQS RILCPCHQSQFDAL + KPIFGPAARAL Sbjct 290 QESFNYGDYFAYSKICTHLGCPTSLYEQQSNRILCPCHQSQFDALTYGKPIFGPAARALP 349 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWER 426 QLPIT++ +G+LVA+GDF+E +GPAFWER Sbjct 350 QLPITVNEEGFLVADGDFIEALGPAFWER 378 >gi|312140188|ref|YP_004007524.1| ubiquinol-cytochrome c reductase peta [Rhodococcus equi 103S] gi|325676930|ref|ZP_08156602.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus equi ATCC 33707] gi|311889527|emb|CBH48844.1| ubiquinol-cytochrome c reductase PetA [Rhodococcus equi 103S] gi|325552230|gb|EGD21920.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus equi ATCC 33707] Length=378 Score = 444 bits (1143), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 216/382 (57%), Positives = 281/382 (74%), Gaps = 14/382 (3%) Query 45 VPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGG 104 P++ + L MS +L+ LG LDGV +A+++ RW V+GTKAEKRAERSVA W +L G Sbjct 9 TPKKYTDDELDRMSRDDLVKLGTNLDGVDVAFRKDRWAVKGTKAEKRAERSVAFWFILAG 68 Query 105 VFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPE 164 V +A + IFLFWPWE+ ++ Y+L TPL GLT GL+IL + +GAV + K+F+PE Sbjct 69 VSAIAFIAIFLFWPWEYAGPGEDTYSAYNLYTPLIGLTMGLAILGVGVGAVKFTKKFVPE 128 Query 165 EISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAG 224 E+SIQ+RHDG S E+D++T+VA L D + STI RRK+I S G GA G+ +++ G Sbjct 129 EVSIQDRHDGGSAEVDKRTLVAQLGDTLDSSTIGRRKMIKRSLIFGGGAIGVMSVMPL-G 187 Query 225 GLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAG 284 G+IKNPW A+G + LW SGWTPRY+GETIYL R TG + +RPED+DAG Sbjct 188 GMIKNPW------AKGDDSPLWVSGWTPRYEGETIYLRRDTGRPH--DIVLVRPEDLDAG 239 Query 285 GMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFG 344 METVFP+RES+ G E L+ GIRN VMLIR++ D +V+KRKGQESFN+G Sbjct 240 AMETVFPFRESE-RGNDEELFKALR----GIRNSVMLIRLRTEDTQKVIKRKGQESFNYG 294 Query 345 EFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITID 404 ++FA++K+C+HLGCP+SLYEQQ+ RILCPCHQSQFDAL + KP+FGPAARAL QLPIT++ Sbjct 295 DYFAYSKICTHLGCPTSLYEQQTNRILCPCHQSQFDALQYGKPLFGPAARALPQLPITVN 354 Query 405 TDGYLVANGDFVEPVGPAFWER 426 +GYLVANGDF+E +GPAFWER Sbjct 355 EEGYLVANGDFIEALGPAFWER 376 >gi|226360274|ref|YP_002778052.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus opacus B4] gi|226238759|dbj|BAH49107.1| menaquinol-cytochrome c reductase iron-sulfur protein [Rhodococcus opacus B4] Length=380 Score = 444 bits (1142), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 221/389 (57%), Positives = 278/389 (72%), Gaps = 16/389 (4%) Query 39 GAKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAV 98 G A P++ +A L +S EL+ LG LD V +A++ RW V GTKAEKRAERSVA Sbjct 5 GQPGGATPKKYTDAELENLSRDELVELGTNLDHVDVAFRRNRWAVPGTKAEKRAERSVAF 64 Query 99 WLLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQ 158 W L G+ +A + I+LFWPWE+ A E YSL TPL GLT GL+IL + +GAV + Sbjct 65 WFALSGISAIAFIAIYLFWPWEYAGAGEEHYSAYSLYTPLIGLTMGLAILGLGVGAVQFT 124 Query 159 KRFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGT 218 K+FIPEE+SIQ+RHDG S E+DRKT+VA L D+F+ ST+ RRKL+ + G GA G+ + Sbjct 125 KKFIPEEVSIQDRHDGGSSEVDRKTIVAELGDSFDTSTLGRRKLLKRTLIFGGGALGIMS 184 Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRP 278 ++ GGLIKNPW A+ + LW SGWTPRY+GETIYL R TG + + +RP Sbjct 185 VMPL-GGLIKNPW------AKRDDSPLWVSGWTPRYEGETIYLRRDTGRPED--VVLVRP 235 Query 279 EDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKG 337 ED+DAG METVFP+RESD GD H L E GIRN MLIR++ D V KRKG Sbjct 236 EDLDAGAMETVFPFRESDRGD------HDALLEGLRGIRNATMLIRLRTEDAANVTKRKG 289 Query 338 QESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALA 397 QESFN+G++FAF+K+C+HLGCP+SLYEQQ+ RILCPCHQSQFDAL + KPIFGPAARAL Sbjct 290 QESFNYGDYFAFSKICTHLGCPTSLYEQQTNRILCPCHQSQFDALTYGKPIFGPAARALP 349 Query 398 QLPITIDTDGYLVANGDFVEPVGPAFWER 426 QLPIT++ +G+LV GD++E +GPAFWER Sbjct 350 QLPITVNEEGFLVTTGDYIEALGPAFWER 378 >gi|296140390|ref|YP_003647633.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296028524|gb|ADG79294.1| Rieske (2Fe-2S) iron-sulfur domain protein [Tsukamurella paurometabola DSM 20162] Length=399 Score = 443 bits (1139), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 220/392 (57%), Positives = 277/392 (71%), Gaps = 22/392 (5%) Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108 P + L +S+ EL+ LG LDGV + Y+EPRWP GT+AEKRAER+VA+W L GVF L Sbjct 16 PSDDELDNLSHDELVKLGTNLDGVELVYREPRWPESGTRAEKRAERTVALWFFLAGVFAL 75 Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168 A L FLFWPWE+K D + + Y+L TP G+T GLS+LS+ IGAVL+ K+FIPEEI++ Sbjct 76 AFLGTFLFWPWEYKGVDDDGYWWYTLYTPALGVTAGLSLLSVFIGAVLFTKKFIPEEIAV 135 Query 169 QERHD-GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLI 227 Q+RHD G S ++D+ T A DA + ST+ RRK+I S G G+G GL F GGLI Sbjct 136 QQRHDAGGSAKVDKLTTGALFKDALDTSTLPRRKMILASAGFGVGVLGLAAAAGFLGGLI 195 Query 228 KNPWKPVVPTAEGKKAVLWTSGWTPRYQG-----------ETIYLARATGTEDGPPFIKM 276 KNPW A+ + + LW +GW+P + ET++L G P +K+ Sbjct 196 KNPW------AKREASPLWHTGWSPYWDSYKNDFSNELNTETVFLRNDVGD---PYKVKL 246 Query 277 -RPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKR 335 RPEDMDAGGM TVFPWR SDG G T ES KL GIRNPVMLIR++P D R +KR Sbjct 247 VRPEDMDAGGMMTVFPWRVSDGFGETEESRKKLLHGLKGIRNPVMLIRLRPDDGVRAIKR 306 Query 336 KGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARA 395 +GQESFN+G+++A+TKVCSH GCP+SLYEQQ+ RILCPCHQSQF+AL + KP+FGPAARA Sbjct 307 QGQESFNYGDYWAYTKVCSHFGCPTSLYEQQTNRILCPCHQSQFNALEYGKPVFGPAARA 366 Query 396 LAQLPITIDTDGYLVANGDFVEPVGPAFWERT 427 LAQLPI+++ GY+VANGDF+E VGPAFWE T Sbjct 367 LAQLPISVNEQGYMVANGDFIEQVGPAFWEAT 398 >gi|262202949|ref|YP_003274157.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086296|gb|ACY22264.1| Rieske (2Fe-2S) iron-sulphur domain protein [Gordonia bronchialis DSM 43247] Length=382 Score = 443 bits (1139), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 221/383 (58%), Positives = 276/383 (73%), Gaps = 12/383 (3%) Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108 P + L MSN EL+ LG LDGV I ++ R+P G+K EKRAER VA+W + G+ + Sbjct 9 PTQDELEQMSNDELVKLGTNLDGVEIIHRSERYPEPGSKVEKRAERQVAIWFTVSGISAI 68 Query 109 ALLLIFLFWPWEFKAADGESDFI-YSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEIS 167 A +IF++ WEF A G +D+ Y+L TPL G+TFGLS+LSI I VL K+F+P EI+ Sbjct 69 ACFIIFIWNHWEF-ALPGSADYWRYTLNTPLLGITFGLSVLSIGIALVLITKKFLPAEIA 127 Query 168 IQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLI 227 +Q+RHDG S E+D+KT+VA L D+ ST+ RRK++ S G+GAF L+AF GGLI Sbjct 128 VQDRHDGGSSELDKKTIVAELVDSGTTSTLGRRKMLIGSAVFGLGAFAFTGLIAFVGGLI 187 Query 228 KNPWKPVVPTAEGKKAVLWTSGWT--PRYQGETIYLARATGTEDGPPFIKMRPEDMDAGG 285 KNPW AEG + LW SGW+ P ET+YL R TG D +RPED+DAG Sbjct 188 KNPW------AEGDNSPLWHSGWSTLPGQPKETVYLRRDTG--DPWRVALVRPEDLDAGA 239 Query 286 METVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGE 345 METVFPWR SDG G S HKL E +RNPVMLIR++P D VKR+GQESFN+G+ Sbjct 240 METVFPWRVSDGYGADEHSRHKLLEGLRQVRNPVMLIRLRPEDAKNAVKRRGQESFNYGD 299 Query 346 FFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 405 +FA+TKVCSHLGCP+SLYEQ++ RILCPCHQSQFDAL +AKP+FGPAARALAQLPIT++ Sbjct 300 YFAYTKVCSHLGCPTSLYEQRTNRILCPCHQSQFDALQYAKPVFGPAARALAQLPITVNN 359 Query 406 DGYLVANGDFVEPVGPAFWERTT 428 +GYLVA GDF+EPVGPAFWER + Sbjct 360 EGYLVAAGDFIEPVGPAFWERRS 382 >gi|229490440|ref|ZP_04384281.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus erythropolis SK121] gi|229322730|gb|EEN88510.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodococcus erythropolis SK121] Length=358 Score = 442 bits (1136), Expect = 6e-122, Method: Compositional matrix adjust. Identities = 221/371 (60%), Positives = 270/371 (73%), Gaps = 16/371 (4%) Query 57 MSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLF 116 MS +L+ LG LDGV + Y+ RW V+GT+AEKRAER+VA W L GV +A + I+LF Sbjct 1 MSRDDLVKLGTNLDGVDVVYRRDRWSVKGTRAEKRAERNVAFWFGLAGVSAIAFIAIYLF 60 Query 117 WPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGAS 176 WPWE+ A E+ YSL TPL GLT GL+IL + IGAV + K+FIPEE+SIQ+RHDG S Sbjct 61 WPWEYAGAGDENYGKYSLYTPLIGLTMGLAILGVGIGAVQFTKKFIPEEVSIQDRHDGGS 120 Query 177 REIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVP 236 E+DR+T+VA L D E ST+ RRK I S G GA G+ +V GGLIKNPW Sbjct 121 TEVDRRTIVAELGDTLETSTLPRRKAIKRSLMFGGGALGV-MMVMPLGGLIKNPW----- 174 Query 237 TAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWRESD 296 A+G + LW SGWTP Y GETIYL R TG + + +RPED+DAG METVFP+RESD Sbjct 175 -AKGDDSPLWVSGWTPNYPGETIYLRRDTGRPED--IVLVRPEDLDAGSMETVFPFRESD 231 Query 297 -GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSH 355 GD H L GIRN VMLIR++ D RV KRKGQESFN+G++FA++K+C+H Sbjct 232 RGD------EHALLAALRGIRNSVMLIRLRTEDTARVTKRKGQESFNYGDYFAYSKICTH 285 Query 356 LGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDF 415 LGCP+SLYEQQS RILCPCHQSQFDAL + KPIFGPAARAL QLPIT++ +G+LVA+GDF Sbjct 286 LGCPTSLYEQQSNRILCPCHQSQFDALTYGKPIFGPAARALPQLPITVNEEGFLVADGDF 345 Query 416 VEPVGPAFWER 426 +E +GPAFWER Sbjct 346 IEALGPAFWER 356 >gi|317506582|ref|ZP_07964374.1| Rieske domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316255091|gb|EFV14369.1| Rieske domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length=383 Score = 440 bits (1131), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 223/386 (58%), Positives = 278/386 (73%), Gaps = 11/386 (2%) Query 46 PREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGV 105 P +P L+ MS EL+ LG DGVR+ ++ RW V GTKAEKRAER VA WL LGG Sbjct 6 PTDPTPEELSRMSRDELVTLGLAKDGVRLIHRTERWAVPGTKAEKRAERLVAFWLFLGGF 65 Query 106 FGLALLLIFLFWPWEFKAADGESDFI-YSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPE 164 LALL +FLF WE+ A GE + Y+ TPL G+T G+SIL++ IGA++Y KRFIPE Sbjct 66 AALALLGVFLFGHWEY-AGPGERGYTAYTWETPLIGITMGVSILALGIGAIVYTKRFIPE 124 Query 165 EISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAG 224 EI++Q+RHDG S+ +D+ T A L D+ E ST+ RR +I + FG + F G Sbjct 125 EIAVQDRHDGGSKPVDKLTFGAILNDSLETSTLPRRTMIKRALLFSGSVFGAAAGIFFLG 184 Query 225 GLIKNPWKPVVPTAEGKKAVLWTSGWTPRY--QGETIYLARATGTEDGPPFIKMRPEDMD 282 G I+NPW A+G + LW +GWTPR +G+ IYL R T +D ++PED+ Sbjct 185 GAIRNPW------AKGNDSDLWHTGWTPRKGEEGKPIYLRRYT-PQDIYSVEIVKPEDLA 237 Query 283 AGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFN 342 +GGMETVFPWRESDG G T ES +L E GIRNPVMLIR++ D RVVKRKGQE+FN Sbjct 238 SGGMETVFPWRESDGKGETEESRERLFESFHGIRNPVMLIRLRQEDAQRVVKRKGQENFN 297 Query 343 FGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPIT 402 +GE++A+TKVCSH+GCP+SLYEQQ+ RILCPCHQSQFDALH+ KPIFGPAARALAQLPIT Sbjct 298 YGEYYAYTKVCSHVGCPTSLYEQQTNRILCPCHQSQFDALHYGKPIFGPAARALAQLPIT 357 Query 403 IDTDGYLVANGDFVEPVGPAFWERTT 428 ++ +GYLVANGDF+EPVGPAFWER + Sbjct 358 VNEEGYLVANGDFIEPVGPAFWERRS 383 >gi|326382514|ref|ZP_08204205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326198633|gb|EGD55816.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=383 Score = 439 bits (1129), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 217/383 (57%), Positives = 275/383 (72%), Gaps = 11/383 (2%) Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108 P + LAAMS E + LG LDGV I ++ R+P GTKAEKRAE +VA+W +L G+F + Sbjct 9 PSDDQLAAMSRDEKVRLGTNLDGVEIIHRAERFPEPGTKAEKRAEFAVAIWFVLAGLFAI 68 Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168 A +F++ WEF+ D + Y+L TPL G++FGLSILS G V KRFIP EI++ Sbjct 69 AGFALFIWNEWEFRMPDESGYWAYTLYTPLLGVSFGLSILSFGFGVVQLTKRFIPAEIAV 128 Query 169 QERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIK 228 Q+RHDG S E+D++TVVA L D + ST+ RRK+I S G+GA + VA GG IK Sbjct 129 QDRHDGGSTEVDKQTVVAELDDTLQTSTLPRRKMIIGSAVFGLGALSVAGGVAAIGGFIK 188 Query 229 NPWKPVVPTAEGKKAVLWTSGWTPRY---QGETIYLARATGTEDGPPFIKMRPEDMDAGG 285 NPW A+G A LW SGW+P Y +GET++L R TG + RPED+DAG Sbjct 189 NPW------AKGDDAPLWHSGWSPIYNETKGETVFLRRDTGNPYQVALV--RPEDLDAGA 240 Query 286 METVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGE 345 METVFPWR SDG G T ES HKL E +RNPVMLIR++P+D V+KRKGQESFN+G+ Sbjct 241 METVFPWRVSDGYGETEESRHKLLEGLREVRNPVMLIRLRPADGKHVIKRKGQESFNYGD 300 Query 346 FFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDT 405 ++A+TKVCSHLGCP+SLYEQQ+ RILCPCHQSQF+AL + K +FGPAARALAQLP++++ Sbjct 301 YYAYTKVCSHLGCPTSLYEQQTNRILCPCHQSQFNALEYGKAVFGPAARALAQLPLSVNN 360 Query 406 DGYLVANGDFVEPVGPAFWERTT 428 GY+VANGDF+EPVGPAFWER + Sbjct 361 QGYMVANGDFIEPVGPAFWERKS 383 >gi|333918950|ref|YP_004492531.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Amycolicicoccus subflavus DQS3-9A1] gi|333481171|gb|AEF39731.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Amycolicicoccus subflavus DQS3-9A1] Length=382 Score = 433 bits (1114), Expect = 2e-119, Method: Compositional matrix adjust. Identities = 210/383 (55%), Positives = 265/383 (70%), Gaps = 19/383 (4%) Query 47 REPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVF 106 + P LA MS EL LG LD V + Y+ RWP++G+KAEKRAER +A W L G+ Sbjct 8 QNPTPEELANMSQDELAKLGANLDDVDVIYRRNRWPIKGSKAEKRAERQIAFWFALAGLS 67 Query 107 GLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEI 166 GLA + IF+FWPWE++ E +YSLTTPLYGLTFGLSILSI I VL K+ IPEEI Sbjct 68 GLAFVAIFVFWPWEYRTVGEEGYALYSLTTPLYGLTFGLSILSIGIAVVLIAKKMIPEEI 127 Query 167 SIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGL 226 ++Q+RHDG S E+D++T VA L DA++ STI RR +I S G+GAF + V GG+ Sbjct 128 AVQQRHDGPSEEVDQRTTVALLRDAYDTSTIGRRGMIKWSAAFGIGAFAVAAPVGLVGGM 187 Query 227 IKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGM 286 +KNPW A+ + LW S WTP Y GETIYL R TG I RPED+DAGGM Sbjct 188 VKNPW------ADRDDSALWRSLWTPDYPGETIYLRRDTGRITDVALI--RPEDIDAGGM 239 Query 287 ETVFPWRES---DGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNF 343 ETVFP++ES D D H+ + VMLI ++ D R V+R+GQE+FN+ Sbjct 240 ETVFPFKESWRGDHDALLKSFRHEY--------SAVMLIHLRAEDANRAVRREGQETFNY 291 Query 344 GEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITI 403 G FFA++K+C+HL CP+SLYEQQ+ RILCPCHQSQFD + +AKP+FGPA RAL QLPIT+ Sbjct 292 GNFFAYSKICTHLACPTSLYEQQTQRILCPCHQSQFDVMQYAKPVFGPATRALPQLPITV 351 Query 404 DTDGYLVANGDFVEPVGPAFWER 426 + +GY+VANGDF+EP+GPAFWER Sbjct 352 NEEGYMVANGDFIEPLGPAFWER 374 >gi|29365474|dbj|BAC66447.1| Fe-S protein of cytochrome c reductase complex [Rhodococcus rhodochrous] Length=373 Score = 414 bits (1065), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 218/374 (59%), Positives = 280/374 (75%), Gaps = 16/374 (4%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L MS +L+ALG LDGV +A+++ RWPV GT+AEKRAER+VA W L GV LA + + Sbjct 13 LDQMSRDDLVALGTNLDGVDVAFRKDRWPVGGTRAEKRAERNVAFWFGLAGVSALAFIAV 72 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 F+FWPWE++ ++ +Y+L TPL GLT GL+IL + +GAV + K+FIPEE+SIQ+RHD Sbjct 73 FIFWPWEYQGPGEDNYALYNLYTPLLGLTLGLAILGVGVGAVQFTKKFIPEEVSIQDRHD 132 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+DR+T+VA L+D+ + ST+ RRKLI + G GA GLG ++ GGLIKNPW Sbjct 133 GVSSEVDRRTIVAELSDSLDTSTLPRRKLIKRTALFGGGALGLGLIMPL-GGLIKNPW-- 189 Query 234 VVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMETVFPWR 293 AEG + LW SGWTPRY GETIYL R TG + + +RPED+DAGGMETVFP+R Sbjct 190 ----AEGDDSPLWVSGWTPRYPGETIYLRRDTGRVND--IVLVRPEDLDAGGMETVFPFR 243 Query 294 ESD-GDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKV 352 ESD GD H L GIRN VMLIR++ D +V+KRKGQESFN+G++FA++K+ Sbjct 244 ESDRGD------EHALLGGLRGIRNAVMLIRLRTEDTAKVIKRKGQESFNYGDYFAYSKI 297 Query 353 CSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGYLVAN 412 C+HLGCP+SLY QQ+ RILCPCHQSQF+AL + KP+FGPAARAL QLPIT++ +G+LVA Sbjct 298 CTHLGCPTSLYGQQTNRILCPCHQSQFNALEYGKPLFGPAARALPQLPITVNEEGFLVAG 357 Query 413 GDFVEPVGPAFWER 426 GDF+E +GPAFWER Sbjct 358 GDFIEALGPAFWER 371 >gi|237785312|ref|YP_002906017.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758224|gb|ACR17474.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Corynebacterium kroppenstedtii DSM 44385] Length=411 Score = 408 bits (1049), Expect = 8e-112, Method: Compositional matrix adjust. Identities = 202/402 (51%), Positives = 270/402 (68%), Gaps = 31/402 (7%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 LAAMSN EL LG +LD V +AY++ R+P++ EKRA RSV +W LLG VF +A + + Sbjct 14 LAAMSNDELARLGTELDDVTVAYRKQRFPMDNDPEEKRAARSVGLWFLLGAVFAIAFIAV 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 +LFWPW++K + ++YSL TPL+G GL+IL + IGAV + K+FIPEEIS+Q RHD Sbjct 74 YLFWPWKYKGLGEDGLWLYSLYTPLFGACMGLAILCLGIGAVKFTKKFIPEEISVQRRHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+D+KT+VA L D++E ST+ RRK++ G G A GL L+ GG+IKNPWKP Sbjct 134 GPSDEVDQKTLVALLNDSWETSTLGRRKVLKGIMGTGAVAAGLA-LIFPIGGMIKNPWKP 192 Query 234 VVPTAEGK-KAVLWTSGWTPRYQGETIYLARATG------------------TEDGPPFI 274 + + LWT+GWTP +G+ +YL R TG T + Sbjct 193 KAKGMDVQGDGTLWTTGWTPTEKGKKVYLGRDTGVTAEKHEGGYEATGETYETRGVTRLV 252 Query 275 KMRPEDMDAGGMETVFPWRES--------DGDGTTVESHHKLQEIAMGIRNPVMLIRIKP 326 ++RPED++AG METVFP E D + E+H E G RN VMLIR++ Sbjct 253 RLRPEDLNAGAMETVFPLLEDVVNDHDKYDKNADVYEAH---MESIHGSRNSVMLIRLRH 309 Query 327 SDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAK 386 SD R ++RKGQE F+FG+++A++K+C+H+GCP+SLYEQQ+ RILCPCHQSQFDALH+ K Sbjct 310 SDAKRAIQRKGQEDFHFGDYYAYSKICTHIGCPTSLYEQQTNRILCPCHQSQFDALHYGK 369 Query 387 PIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 P+FGPAAR L QLPI +D +G+L A G+FVE VGPAFWER + Sbjct 370 PVFGPAARPLPQLPIAVDDEGFLYAKGNFVESVGPAFWERRS 411 >gi|38234200|ref|NP_939967.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium diphtheriae NCTC 13129] gi|62900986|sp|Q6NGA2.1|QCRA_CORDI RecName: Full=Probable menaquinol-cytochrome c reductase iron-sulfur subunit; AltName: Full=Cytochrome bc1 complex Rieske iron-sulfur protein; AltName: Full=Rieske iron-sulfur protein gi|38200462|emb|CAE50150.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium diphtheriae] Length=406 Score = 402 bits (1034), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 203/393 (52%), Positives = 268/393 (69%), Gaps = 22/393 (5%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L AMSN+EL LG +LDGV +AY++ R+PVEG A KRA R+V +W +G V LA L + Sbjct 14 LDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWFGIGIVSALAFLAV 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 +LF PWE+K + +IY+ TPL GLT GL+ILS+ IG + Y K+ IP EIS+Q RHD Sbjct 74 YLFMPWEYKGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKKIIPSEISVQRRHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S EIDR+T+ A L D++E ST+ RRK++ G+G GL T++A GG++KNPWK Sbjct 134 GPSEEIDRRTITALLNDSWETSTLGRRKVLKSMLGIGGVLAGL-TIIAPLGGMVKNPWKK 192 Query 234 VVPTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMRP 278 +G LWTSGWT +G +YL R TG T+ I+MRP Sbjct 193 GELGIQGD-GTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYSTQGVSRLIRMRP 251 Query 279 EDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRVV 333 ED+ A METVFP E DG ++ + E M G RN VMLIR++ SD +V+ Sbjct 252 EDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLIRLRNSDANKVI 311 Query 334 KRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAA 393 +R+GQE F++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPAA Sbjct 312 EREGQEDFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPAA 371 Query 394 RALAQLPITIDTDGYLVANGDFVEPVGPAFWER 426 RAL QLPIT+D +GYLVA G+F+EPVGPAFWER Sbjct 372 RALPQLPITVDEEGYLVAAGNFIEPVGPAFWER 404 >gi|213965204|ref|ZP_03393401.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium amycolatum SK46] gi|213952056|gb|EEB63441.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium amycolatum SK46] Length=403 Score = 402 bits (1033), Expect = 6e-110, Method: Compositional matrix adjust. Identities = 198/392 (51%), Positives = 267/392 (69%), Gaps = 19/392 (4%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L+ MSN +L LG +LD V IAY++ R+P+ AEKRA R VA+WL L + GLA + I Sbjct 14 LSKMSNADLARLGAELDDVTIAYRKERFPIANDPAEKRAARGVAIWLALSVILGLAFIAI 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 +LF+PW +K E ++Y++ TPL G+T G I+++ +GAV + KRFIPEEIS+Q RHD Sbjct 74 YLFYPWHYKGHGEEGLWLYTMYTPLLGITLGGCIVTLGVGAVKFTKRFIPEEISVQRRHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+D+KT+VA L D+++ ST+ RR I G G G+G ++ GG+IKNPWKP Sbjct 134 GPSEEVDQKTIVALLNDSWQTSTLGRRSAIKGLLGTGAVLAGIGMILPI-GGMIKNPWKP 192 Query 234 VVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT--EDGPP---------FIKMRPEDMD 282 LWT+GWT +GE +YL R TG E+G ++MRPED+ Sbjct 193 RHDVDVTGDGTLWTTGWTLVEKGERVYLGRDTGAIAEEGEHGYTTKGVSRLVRMRPEDLS 252 Query 283 AGGMETVFPW---RESDGDGTTVES---HHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRK 336 AG METVFP +DGD + ++ H + I G RN VMLIR++ D + V R+ Sbjct 253 AGAMETVFPLPAADVNDGDKYSKDADVYEHHMHSI-HGSRNSVMLIRLRAQDAEKAVLRQ 311 Query 337 GQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARAL 396 GQE F++G++FAF+K+C+H+GCP+SLYEQQ+ RILCPCHQSQFDALH+ KP+FGPAARAL Sbjct 312 GQEDFHYGDYFAFSKICTHIGCPTSLYEQQTNRILCPCHQSQFDALHYGKPVFGPAARAL 371 Query 397 AQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 QLPI++D +GY+ A G+FVEPVGPAFWER + Sbjct 372 PQLPISVDEEGYMYAKGNFVEPVGPAFWERQS 403 >gi|255325370|ref|ZP_05366476.1| menaquinol-cytochrome c reductase iron-sulfur subunit [Corynebacterium tuberculostearicum SK141] gi|311741501|ref|ZP_07715325.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|255297935|gb|EET77246.1| menaquinol-cytochrome c reductase iron-sulfur subunit [Corynebacterium tuberculostearicum SK141] gi|311303671|gb|EFQ79750.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium pseudogenitalium ATCC 33035] Length=406 Score = 400 bits (1029), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 204/407 (51%), Positives = 273/407 (68%), Gaps = 23/407 (5%) Query 43 TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLL 102 + V + A L MSN EL ALG +LD V +A+++ R+PVEG AEKRA R+VA+WL L Sbjct 2 SNVKKNYTNAELDKMSNDELAALGTELDDVTVAFRKERFPVEGDPAEKRAGRNVAIWLFL 61 Query 103 GGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFI 162 + GL L ++LFWPW++K E ++L TPL G+T L+I + I V Y K+ + Sbjct 62 SVIGGLGFLGVYLFWPWQYKQLGEEGHIWHTLYTPLLGITAALAICGLGIAIVQYVKKIL 121 Query 163 PEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGTLVA 221 PEEIS+Q RHDG S E+DR+T+ A L D+++ ST+ RRK + GL G G+ FGL T++A Sbjct 122 PEEISVQRRHDGPSEEVDRRTLTALLNDSWKTSTLGRRKTVQGLLGGAGV-LFGL-TVIA 179 Query 222 FAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT-------EDGPPF- 273 GG IKNPWK LWTSGWT +G +YLAR TGT E G + Sbjct 180 PLGGAIKNPWKVRHNMNYAGDGTLWTSGWTMHNEGVKLYLARDTGTIAEKHSGETGEHYS 239 Query 274 -------IKMRPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVML 321 +++RPED+ AGGMETVFP E D DG ++ + E M G RN VML Sbjct 240 TKGVTRLVRVRPEDLAAGGMETVFPLAEEDVNDGDKYDAERDVYEHHMHSIHGNRNAVML 299 Query 322 IRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDA 381 IR++ +D + ++R+GQE F+ G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDA Sbjct 300 IRLRHNDAQKAIEREGQEDFHHGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDA 359 Query 382 LHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 LH+ KP+FGPAARAL QLPIT+D +GYLVA G+F+EPVGPAFWER + Sbjct 360 LHYGKPVFGPAARALPQLPITVDDEGYLVAQGNFIEPVGPAFWERKS 406 >gi|227503252|ref|ZP_03933301.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium accolens ATCC 49725] gi|227075755|gb|EEI13718.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium accolens ATCC 49725] Length=406 Score = 399 bits (1026), Expect = 4e-109, Method: Compositional matrix adjust. Identities = 205/407 (51%), Positives = 275/407 (68%), Gaps = 23/407 (5%) Query 43 TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLL 102 + V + +A L MSN EL ALG +LD V +A+++ R+PVEG AEKRA R+VA+WL L Sbjct 2 SNVKKNYTDAELDKMSNDELAALGTELDDVTVAFRKERFPVEGDPAEKRAGRNVAIWLAL 61 Query 103 GGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFI 162 + GLA L ++LFWPW++K + ++L TPL G+T LSI + V Y K+ + Sbjct 62 SVIGGLAFLGVYLFWPWQYKQLGEDGLVWHTLYTPLLGITAALSIFGLGFAIVQYVKKIL 121 Query 163 PEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGTLVA 221 PEEIS+Q RHDG S E+DR+T+ A L D+++ ST+ RRK I GL G G+ FGL T++A Sbjct 122 PEEISVQRRHDGPSEEVDRRTLTALLNDSWKTSTLGRRKTIQGLLGGAGV-LFGL-TVIA 179 Query 222 FAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT-------EDGPPF- 273 GG I+NPWK LWTSGWT +G +YLAR TGT E G + Sbjct 180 PLGGAIRNPWKVRHELNYAGDGTLWTSGWTMHEKGVKLYLARDTGTIAEKHSGESGEHYT 239 Query 274 -------IKMRPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVML 321 +++RPED+ AGGMETVFP E D DG ++ + E M G RN VML Sbjct 240 TEGVTRLVRVRPEDLAAGGMETVFPLAEEDVNDGDQYDAKRDVYEHHMHSIHGNRNAVML 299 Query 322 IRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDA 381 IR++ SD + ++R+GQE+F+ G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDA Sbjct 300 IRLRHSDAQKAIEREGQENFHHGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDA 359 Query 382 LHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 LH+ KP+FGPAARAL QLPIT+D +GYLVA G+F+EPVGPAFWER + Sbjct 360 LHYGKPVFGPAARALPQLPITVDDEGYLVAEGNFIEPVGPAFWERKS 406 >gi|306836519|ref|ZP_07469490.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium accolens ATCC 49726] gi|304567609|gb|EFM43203.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Corynebacterium accolens ATCC 49726] Length=417 Score = 399 bits (1025), Expect = 5e-109, Method: Compositional matrix adjust. Identities = 206/410 (51%), Positives = 275/410 (68%), Gaps = 23/410 (5%) Query 40 AKATAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVW 99 A + V + +A L MSN EL ALG +LD V +A+++ R+PVEG AEKRA R+VA+W Sbjct 10 ALMSNVKKNYTDAELDKMSNDELAALGTELDDVTVAFRKERFPVEGDPAEKRAGRNVAIW 69 Query 100 LLLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQK 159 L L + GLA L ++LFWPW++K + ++L TPL G+T LSI + V Y K Sbjct 70 LALSVIGGLAFLGVYLFWPWQYKQLGEDGLVWHTLYTPLLGITAALSIFGLGFAIVQYVK 129 Query 160 RFIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGT 218 + +PEEIS+Q RHDG S E+DR+T+ A L D+++ ST+ RRK I GL G G+ FGL T Sbjct 130 KILPEEISVQRRHDGPSEEVDRRTLTALLNDSWKTSTLGRRKTIQGLLGGAGV-LFGL-T 187 Query 219 LVAFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGT-------EDGP 271 ++A GG I+NPWK LWTSGWT +G +YLAR TGT E G Sbjct 188 VIAPLGGAIRNPWKVRHEVNYAGDGTLWTSGWTMHEKGVKLYLARDTGTIAEKHSGESGE 247 Query 272 PF--------IKMRPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNP 318 + +++RPED+ AGGMETVFP E D DG ++ + E M G RN Sbjct 248 HYTTEGVTRLVRVRPEDLAAGGMETVFPLAEEDVNDGDQYDAKRDVYEHHMHSIHGNRNA 307 Query 319 VMLIRIKPSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQ 378 VMLIR++ SD + ++R+GQE F+ G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQ Sbjct 308 VMLIRLRHSDAQKAIEREGQEDFHHGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQ 367 Query 379 FDALHFAKPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 FDALH+ KP+FGPAARAL QLPIT+D +GYLVA G+F+EPVGPAFWER + Sbjct 368 FDALHYGKPVFGPAARALPQLPITVDDEGYLVAEGNFIEPVGPAFWERKS 417 >gi|319950680|ref|ZP_08024581.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Dietzia cinnamea P4] gi|319435663|gb|EFV90882.1| ubiquinol-cytochrome c reductase iron-sulfur protein [Dietzia cinnamea P4] Length=396 Score = 399 bits (1024), Expect = 7e-109, Method: Compositional matrix adjust. Identities = 207/403 (52%), Positives = 270/403 (67%), Gaps = 25/403 (6%) Query 43 TAVPREPDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEG--TKAEKRAERSVAVWL 100 + P+ P A L MS EL+ LG +LD V + ++E RWP EG T+AEKRA R+V W Sbjct 2 SETPKNPSPADLDRMSEAELVRLGTELDEVDVRHRENRWP-EGVTTRAEKRAARTVTTWF 60 Query 101 LLGGVFGLALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKR 160 L +F LA +++LFWPWE++ + ++Y TPL G T GLSIL + GAV + K+ Sbjct 61 ALSALFALAFAVVYLFWPWEYRGEGEDGFWLYMAYTPLLGGTIGLSILFLGFGAVQFTKK 120 Query 161 FIPEEISIQERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLV 220 F+PEEIS+Q RHDG S E+DR+T+VA L D+++ STI RRK++G G G+G GL ++ Sbjct 121 FVPEEISVQTRHDGVSDEVDRRTIVAELNDSWKTSTIGRRKVMGGFLGAGVGLIGLSAIL 180 Query 221 AFAGGLIKNPWKPVVPTAEGKKAVLWTSGWTPRYQG-------ETIYLARATGT--EDGP 271 GG+IKNPWK T G L T+GWT + E +YL R TG DG Sbjct 181 PL-GGMIKNPWKRGEMTLSGD-GTLHTTGWTLASENRPDGLPPEKVYLGRDTGKVYPDGH 238 Query 272 P------FIKMRPEDMDAGGMETVFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIK 325 P ++R +D+ AGG+E+VFP ES G E H + G RN VMLIR + Sbjct 239 PPAGEGRLERIRVDDLAAGGLESVFPLPES-ALGNFEEHMHSIH----GSRNSVMLIRFR 293 Query 326 PSDLGRVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFA 385 P D RV KRKGQE+FN+G+ +A++K+C+HLGCP+SLYEQQ++R LCPCHQSQFDAL +A Sbjct 294 PEDAARVTKRKGQENFNYGDLYAYSKICTHLGCPTSLYEQQTHRFLCPCHQSQFDALEYA 353 Query 386 KPIFGPAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 KP+FGPAARAL QLPI +D++GYLVANGDFVEPVGPAFWER + Sbjct 354 KPVFGPAARALPQLPIAVDSEGYLVANGDFVEPVGPAFWERRS 396 >gi|256375513|ref|YP_003099173.1| Rieske (2Fe-2S) domain-containing protein [Actinosynnema mirum DSM 43827] gi|255919816|gb|ACU35327.1| Rieske (2Fe-2S) domain protein [Actinosynnema mirum DSM 43827] Length=374 Score = 397 bits (1020), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 194/380 (52%), Positives = 254/380 (67%), Gaps = 15/380 (3%) Query 49 PDEAALAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGL 108 PDEA L+ MS EL+ LG ++DGV + + E RWPV+GT+AEKRAER VA+W + + G+ Sbjct 10 PDEAQLSKMSRDELVKLGTEMDGVELVHYEERWPVKGTRAEKRAERLVALWFAIAALAGV 69 Query 109 ALLLIFLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISI 168 L FLFWPW+++A E+ ++Y L TP+ G T LS+L++ +GA+LY K+FIPEE+++ Sbjct 70 GFLAAFLFWPWKYEAPHTENHWLYQLYTPVIGATLALSVLALGVGALLYTKKFIPEELAV 129 Query 169 QERHDGASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIK 228 Q+RHDG S +D T+VA L D ST+ RR LI + G+G G FGLG L GG++K Sbjct 130 QQRHDGGSSPVDSATLVAELGDVGARSTLGRRSLIKRTAGLGAGVFGLGVLAVPLGGMVK 189 Query 229 NPWKPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATGTEDGPPFIKMRPEDMDAGGMET 288 NP K LW +GW GE +YL R TG + RPED+DAGG ET Sbjct 190 NP-----HADSETKDSLWHTGWKSE-NGEKVYLRRHTGNFHDVELV--RPEDLDAGGFET 241 Query 289 VFPWRESDGDGTTVESHHKLQEIAMGIRNPVMLIRIKPSDLGRVVKRKGQESFNFGEFFA 348 VFP+RES+ H+L + NPVMLIR++P V KR GQE FN+G+ +A Sbjct 242 VFPFRESERG-----HEHELVQALKRADNPVMLIRLRPGQA--VTKRAGQEDFNYGDLYA 294 Query 349 FTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLPITIDTDGY 408 ++K+C+HLGCP+SLYEQQ+ +LCPCHQSQFD H+ KP FGPA RAL QLPIT+D DGY Sbjct 295 YSKICTHLGCPTSLYEQQTGLLLCPCHQSQFDVFHYGKPRFGPATRALPQLPITVDEDGY 354 Query 409 LVANGDFVEPVGPAFWERTT 428 L+A DF E VGPAFWER + Sbjct 355 LIARSDFTEAVGPAFWERKS 374 >gi|227488503|ref|ZP_03918819.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227543109|ref|ZP_03973158.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227091397|gb|EEI26709.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227181097|gb|EEI62069.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium glucuronolyticum ATCC 51866] Length=403 Score = 396 bits (1018), Expect = 3e-108, Method: Compositional matrix adjust. Identities = 204/398 (52%), Positives = 268/398 (68%), Gaps = 31/398 (7%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L MS ++L LG ++DGV IAY++ R+P+ AEKRA R+V WL+LG + LA L I Sbjct 14 LKNMSQEDLARLGTEMDGVTIAYRKERFPITNDPAEKRASRTVGFWLVLGIICALAFLAI 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 +LFWPWE+K E + Y+ TPL G+T GLSI+S+AI LY KRFIPEEI++QERHD Sbjct 74 YLFWPWEYKGLGQEGMWWYTFYTPLLGVTMGLSIISLAIATALYIKRFIPEEIAVQERHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+D++T+ A L D++E S++ RRK++ FG G G+ +++A GG+IKNPWKP Sbjct 134 GPSDEVDQRTLTALLNDSWETSSLGRRKVLKGLFGTGAVLAGI-SIIAPLGGMIKNPWKP 192 Query 234 VVPTAEGKKAVLWTSGW----TPRYQGETIYLARATG------------TEDGPPFIKMR 277 +G LWTSGW TP + E IYL R TG T +++R Sbjct 193 GKLGIQGD-GTLWTSGWSLLDTP--EVEKIYLGRDTGIAAEKDEHGNYHTNGLARLVRVR 249 Query 278 PEDMDAGGMETVFPW------RESDGDGTTVESH-HKLQEIAMGIRNPVMLIRIKPSDLG 330 PED+ AGGMETVFP R D E H H + G RN VMLIR++ D Sbjct 250 PEDLAAGGMETVFPLLPEAVIRHGDKTKDVYEEHMHSIH----GPRNAVMLIRLRSEDAN 305 Query 331 RVVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFG 390 RVV+R+GQE ++FG+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FG Sbjct 306 RVVEREGQEDYHFGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFG 365 Query 391 PAARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 PAARAL QLPIT+D +GYLVA +F EPVGPAFWER + Sbjct 366 PAARALPQLPITVDEEGYLVATRNFSEPVGPAFWERES 403 >gi|340794100|ref|YP_004759563.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium variabile DSM 44702] gi|340534010|gb|AEK36490.1| ubiquinol-cytochrome C reductase iron-sulfur protein [Corynebacterium variabile DSM 44702] Length=386 Score = 395 bits (1016), Expect = 5e-108, Method: Compositional matrix adjust. Identities = 193/388 (50%), Positives = 264/388 (69%), Gaps = 18/388 (4%) Query 57 MSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLIFLF 116 MS++EL LG +LDGV +AY++ R+PVE AEKRA + VW L V G+A + ++LF Sbjct 1 MSDEELARLGTELDGVTVAYRKERFPVENDPAEKRAAFGINVWFALSVVLGIAFVAVYLF 60 Query 117 WPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHDGAS 176 WPW++K + + ++Y+L TPL G T GLSI+ + +GAV + K+F+PEEIS+Q RHDG S Sbjct 61 WPWQYKHLEEDGLWMYTLYTPLLGATAGLSIICLGVGAVQFSKKFVPEEISVQTRHDGPS 120 Query 177 REIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKPVVP 236 E+DRKT+ A L DA++ ST+ RRK++ G G GL ++ GG+IKNPWKP Sbjct 121 EEVDRKTITALLNDAWKTSTLGRRKVMMGLAGTGAALMGLAVVLPL-GGIIKNPWKPKAM 179 Query 237 TAEGKKAVLWTSGWTPRYQGETIYLARATG-----------TEDGPPFIKMRPEDMDAGG 285 +G LWT+GWT +GE +YL R T T+ +++RPED+DAG Sbjct 180 GIQGD-GTLWTTGWTLVDEGEKVYLGRDTAAIAEEHNGHYTTQGVNRLVRVRPEDLDAGA 238 Query 286 METVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRVVKRKGQES 340 METVFP E DG +S+ + E M G RN VMLIR++ D + V+R GQE Sbjct 239 METVFPLSEEMVNDGEKYDSNKDVYEEHMHSVHGPRNAVMLIRLRHEDAVKAVQRDGQED 298 Query 341 FNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPAARALAQLP 400 F++G+++A++K+C+H+GCP+SLYEQQ+ RILCPCHQSQFDALH+ KP+FGPAARAL +L Sbjct 299 FHYGDYYAYSKICTHIGCPTSLYEQQTNRILCPCHQSQFDALHWGKPVFGPAARALPELS 358 Query 401 ITIDTDGYLVANGDFVEPVGPAFWERTT 428 I +D DGYL A +F+EPVGPAFWER + Sbjct 359 INVDADGYLYAEHNFIEPVGPAFWERKS 386 >gi|344044860|gb|EGV40535.1| hypothetical protein CgS9114_08126 [Corynebacterium glutamicum S9114] Length=408 Score = 394 bits (1013), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 200/396 (51%), Positives = 264/396 (67%), Gaps = 22/396 (5%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L AMSN++L LG +LD V IAY++ R+P+ AEKRA R+V WL+LG + GL L Sbjct 14 LNAMSNEDLARLGTELDDVTIAYRKERFPIPNDPAEKRAARAVTFWLVLGIIGGLGFLAT 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 ++FWPWE+KA E Y+L TP+ G+T GL ILS+ VLY K+FIPEEI++Q RHD Sbjct 74 YIFWPWEYKAHGDEGLLAYTLYTPMLGITSGLCILSLGFAVVLYVKKFIPEEIAVQRRHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+DR+T+VA L D+++ ST+ RRKLI G G GL T++A GG+IKNPWKP Sbjct 134 GPSEEVDRRTIVALLNDSWQTSTLGRRKLIMGLAGGGAVLAGL-TIIAPMGGMIKNPWKP 192 Query 234 VV-PTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMR 277 P LWTSGWT +YL R T T ++MR Sbjct 193 KEGPMDVQGDGTLWTSGWTLVENDVKVYLGRDTAAIAESHTDATGEHWSTTGVSRLVRMR 252 Query 278 PEDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRV 332 PED+ A METVFP E DG + + E M G RN VMLIR++ +D +V Sbjct 253 PEDLAAASMETVFPLPAEMVNDGAEYDPAKDVYEHQMHSVHGPRNAVMLIRLRTADAEKV 312 Query 333 VKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPA 392 ++R+GQESF++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPA Sbjct 313 IEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPA 372 Query 393 ARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 ARAL QLPIT+D +GYL+A G+F+EP+GPAFWER + Sbjct 373 ARALPQLPITVDEEGYLIAAGNFIEPLGPAFWERKS 408 >gi|145296152|ref|YP_001138973.1| hypothetical protein cgR_2072 [Corynebacterium glutamicum R] gi|140846072|dbj|BAF55071.1| hypothetical protein [Corynebacterium glutamicum R] Length=408 Score = 394 bits (1013), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 201/396 (51%), Positives = 263/396 (67%), Gaps = 22/396 (5%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L AMSN++L LG +LD V IAY++ R+P+ AEKRA R+V WL LG + GL L Sbjct 14 LNAMSNEDLARLGTELDDVTIAYRKERFPIPNDPAEKRAARAVTFWLALGIIGGLGFLAT 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 ++FWPWE+KA E Y+L TP+ G+T GL ILS+ VLY K+FIPEEI++Q RHD Sbjct 74 YIFWPWEYKAHGDEGLLAYTLYTPMLGITSGLCILSLGFAVVLYVKKFIPEEIAVQRRHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+DR+T+VA L D+++ ST+ RRKLI G G GL T++A GG+IKNPWKP Sbjct 134 GPSEEVDRRTIVALLNDSWQTSTLGRRKLIMGLAGGGAVLAGL-TIIAPMGGMIKNPWKP 192 Query 234 VV-PTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMR 277 P LWTSGWT +YL R T T ++MR Sbjct 193 KEGPMDVQGDGTLWTSGWTLVENDVKVYLGRDTAAIAESHTDATGEHWSTTGVSRLVRMR 252 Query 278 PEDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRV 332 PED+ A METVFP E DG + + E M G RN VMLIR++ +D +V Sbjct 253 PEDLAAASMETVFPLPAEMVNDGAEYDPAKDVYEHQMHSVHGPRNAVMLIRLRTADAEKV 312 Query 333 VKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPA 392 ++R+GQESF++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPA Sbjct 313 IEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPA 372 Query 393 ARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 ARAL QLPIT+D +GYL+A G+F+EPVGPAFWER + Sbjct 373 ARALPQLPITVDEEGYLIAAGNFIEPVGPAFWERKS 408 >gi|225021889|ref|ZP_03711081.1| hypothetical protein CORMATOL_01921 [Corynebacterium matruchotii ATCC 33806] gi|305681459|ref|ZP_07404266.1| Rieske (2Fe-2S) domain protein [Corynebacterium matruchotii ATCC 14266] gi|224945346|gb|EEG26555.1| hypothetical protein CORMATOL_01921 [Corynebacterium matruchotii ATCC 33806] gi|305659664|gb|EFM49164.1| Rieske (2Fe-2S) domain protein [Corynebacterium matruchotii ATCC 14266] Length=405 Score = 394 bits (1011), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 203/397 (52%), Positives = 270/397 (69%), Gaps = 26/397 (6%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L MSN EL LG +LD V +AY++ R+P++ AEKRA R+VA+WL +G + +A L + Sbjct 13 LNGMSNGELARLGTELDDVTVAYRKERFPIDNDPAEKRASRAVALWLGIGVLSAIAFLGV 72 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 ++ WPW++K E +Y+ TPL G+T GL+ILS+ VLY K IPEEI++Q RHD Sbjct 73 YIAWPWQYKGLGDEGVTLYTFYTPLLGITAGLAILSLGFAVVLYVKTIIPEEIAVQRRHD 132 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLI-GLSFGVGMGAFGLGTLVAF-AGGLIKNPW 231 G S E+DR+T+VA L D++E ST+ RRK++ GL +GM A +G ++A GG+IKNPW Sbjct 133 GPSSEVDRRTIVALLNDSWETSTLGRRKVLQGL---LGMSAVLVGLVIAAPLGGMIKNPW 189 Query 232 KPVVPTAEGKKAVLWTSGWTPRYQGETIYLARATG-------TEDGPPF--------IKM 276 K +G LWTSGWT +G +YL R TG T+ G + ++M Sbjct 190 KAGKLGIQGD-GTLWTSGWTLTEKGVKLYLGRDTGALAVKHETDAGEHYSTQGVTRLVRM 248 Query 277 RPEDMDAGGMETVFPWRESD-GDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGR 331 RPED+ A METVFP E D DG + + E M G RN VMLIR++ SD + Sbjct 249 RPEDLAAAAMETVFPLPEEDVNDGDLYDPTRDVYETHMHSIHGPRNAVMLIRLRSSDAAK 308 Query 332 VVKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGP 391 VV+R GQE F+FG+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGP Sbjct 309 VVERVGQEDFHFGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGP 368 Query 392 AARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 AARAL QLPIT+D DGYLVA G+FVEPVGPAFWER + Sbjct 369 AARALPQLPITVDEDGYLVAAGNFVEPVGPAFWERKS 405 >gi|19553392|ref|NP_601394.1| Rieske Fe-S protein [Corynebacterium glutamicum ATCC 13032] gi|62391030|ref|YP_226432.1| Rieske iron-sulfur protein [Corynebacterium glutamicum ATCC 13032] gi|62900998|sp|Q79VE8.1|QCRA_CORGL RecName: Full=Menaquinol-cytochrome c reductase iron-sulfur subunit; AltName: Full=Cytochrome bc1 complex Rieske iron-sulfur protein; AltName: Full=Rieske iron-sulfur protein gi|13274110|emb|CAC33827.1| rieske iron-sulfur protein [Corynebacterium glutamicum] gi|21324960|dbj|BAB99583.1| Rieske Fe-S protein [Corynebacterium glutamicum ATCC 13032] gi|41326369|emb|CAF20531.1| RIESKE IRON-SULFUR PROTEIN [Corynebacterium glutamicum ATCC 13032] Length=408 Score = 393 bits (1010), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 199/396 (51%), Positives = 263/396 (67%), Gaps = 22/396 (5%) Query 54 LAAMSNQELLALGGKLDGVRIAYKEPRWPVEGTKAEKRAERSVAVWLLLGGVFGLALLLI 113 L AMSN++L LG +LD V IAY++ R+P+ AEKRA R+V WL+LG + GL L Sbjct 14 LNAMSNEDLARLGTELDDVTIAYRKERFPIANDPAEKRAARAVTFWLVLGIIGGLGFLAT 73 Query 114 FLFWPWEFKAADGESDFIYSLTTPLYGLTFGLSILSIAIGAVLYQKRFIPEEISIQERHD 173 ++FWPWE+KA E Y+L TP+ G+T GL ILS+ VLY K+FIPEEI++Q RHD Sbjct 74 YIFWPWEYKAHGDEGLLAYTLYTPMLGITSGLCILSLGFAVVLYVKKFIPEEIAVQRRHD 133 Query 174 GASREIDRKTVVANLTDAFEGSTIRRRKLIGLSFGVGMGAFGLGTLVAFAGGLIKNPWKP 233 G S E+DR+T+VA L D+++ ST+ RRKLI G G GL T++A GG+IKNPW P Sbjct 134 GPSEEVDRRTIVALLNDSWQTSTLGRRKLIMGLAGGGAVLAGL-TIIAPMGGMIKNPWNP 192 Query 234 VV-PTAEGKKAVLWTSGWTPRYQGETIYLARATG---------------TEDGPPFIKMR 277 P LWTSGWT +YL R T T ++MR Sbjct 193 KEGPMDVQGDGTLWTSGWTLVENDVKVYLGRDTAAIAESHTDATGEHWSTTGVSRLVRMR 252 Query 278 PEDMDAGGMETVFPW-RESDGDGTTVESHHKLQEIAM----GIRNPVMLIRIKPSDLGRV 332 PED+ A METVFP E DG + + E M G RN VMLIR++ +D +V Sbjct 253 PEDLAAASMETVFPLPAEMVNDGAEYDPAKDVYEHQMHSVHGPRNAVMLIRLRTADAEKV 312 Query 333 VKRKGQESFNFGEFFAFTKVCSHLGCPSSLYEQQSYRILCPCHQSQFDALHFAKPIFGPA 392 ++R+GQESF++G+++A++K+C+H+GCP+SLYE Q+ RILCPCHQSQFDALH+ KP+FGPA Sbjct 313 IEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPA 372 Query 393 ARALAQLPITIDTDGYLVANGDFVEPVGPAFWERTT 428 ARAL QLPIT+D +GYL+A G+F+EP+GPAFWER + Sbjct 373 ARALPQLPITVDEEGYLIAAGNFIEPLGPAFWERKS 408 Lambda K H 0.320 0.138 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 877435408584 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40