BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2196 Length=549 Score E Sequences producing significant alignments: (Bits) Value gi|308376941|ref|ZP_07668391.1| ubiquinol-cytochrome C reductase... 1108 0.0 gi|15609333|ref|NP_216712.1| ubiquinol-cytochrome C reductase Qc... 1107 0.0 gi|298525688|ref|ZP_07013097.1| ubiquinol-cytochrome C reductase... 1105 0.0 gi|339295110|gb|AEJ47221.1| ubiquinol-cytochrome C reductase qcr... 1102 0.0 gi|308375808|ref|ZP_07445174.2| ubiquinol-cytochrome C reductase... 1097 0.0 gi|289758316|ref|ZP_06517694.1| ubiquinol-cytochrome C reductase... 1096 0.0 gi|240168255|ref|ZP_04746914.1| putative ubiquinol-cytochrome c ... 1019 0.0 gi|15827402|ref|NP_301665.1| cytochrome B [Mycobacterium leprae ... 1013 0.0 gi|41408033|ref|NP_960869.1| QcrB [Mycobacterium avium subsp. pa... 989 0.0 gi|336461919|gb|EGO40772.1| cytochrome b subunit of the bc compl... 986 0.0 gi|254822832|ref|ZP_05227833.1| cytochrome b6 [Mycobacterium int... 976 0.0 gi|342859906|ref|ZP_08716559.1| cytochrome b6 [Mycobacterium col... 972 0.0 gi|118618838|ref|YP_907170.1| ubiquinol-cytochrome C reductase Q... 972 0.0 gi|289574882|ref|ZP_06455109.1| ubiquinol-cytochrome C reductase... 966 0.0 gi|296166064|ref|ZP_06848511.1| ubiquinol-cytochrome C reductase... 945 0.0 gi|333990347|ref|YP_004522961.1| ubiquinol-cytochrome C reductas... 922 0.0 gi|118471438|ref|YP_888540.1| ubiquinol-cytochrome C reductase c... 895 0.0 gi|145223540|ref|YP_001134218.1| cytochrome b/b6 domain-containi... 894 0.0 gi|120404531|ref|YP_954360.1| cytochrome b/b6 domain-containing ... 875 0.0 gi|169629053|ref|YP_001702702.1| ubiquinol-cytochrome c reductas... 863 0.0 gi|108800260|ref|YP_640457.1| cytochrome b/b6-like protein [Myco... 852 0.0 gi|126435883|ref|YP_001071574.1| cytochrome b/b6 domain-containi... 852 0.0 gi|54023697|ref|YP_117939.1| putative cytochrome b component [No... 834 0.0 gi|312140189|ref|YP_004007525.1| ubiquinol-cytochrome c reductas... 828 0.0 gi|325676929|ref|ZP_08156601.1| ubiquinol-cytochrome c reductase... 827 0.0 gi|111018146|ref|YP_701118.1| ubiquinol-cytochrome c reductase c... 822 0.0 gi|226360275|ref|YP_002778053.1| menaquinol-cytochrome c reducta... 821 0.0 gi|343924166|ref|ZP_08763729.1| menaquinol-cytochrome c reductas... 813 0.0 gi|226307085|ref|YP_002767045.1| menaquinol-cytochrome c reducta... 812 0.0 gi|229490465|ref|ZP_04384306.1| ubiquinol-cytochrome c reductase... 811 0.0 gi|296164248|ref|ZP_06846839.1| ubiquinol-cytochrome c reductase... 806 0.0 gi|326382513|ref|ZP_08204204.1| cytochrome b/b6 domain-containin... 805 0.0 gi|296140391|ref|YP_003647634.1| cytochrome b/b6 domain-containi... 803 0.0 gi|262202950|ref|YP_003274158.1| cytochrome b/b6 domain-containi... 801 0.0 gi|289443703|ref|ZP_06433447.1| LOW QUALITY PROTEIN: ubiquinol-c... 790 0.0 gi|29365475|dbj|BAC66448.1| cytochrome b of cytochrome c reducta... 790 0.0 gi|169629553|ref|YP_001703202.1| ubiquinol-cytochrome c reductas... 786 0.0 gi|317506581|ref|ZP_07964373.1| cytochrome [Segniliparus rugosus... 768 0.0 gi|333918949|ref|YP_004492530.1| Ubiquinol-cytochrome c reductas... 768 0.0 gi|296393478|ref|YP_003658362.1| cytochrome b/b6 domain-containi... 767 0.0 gi|262203490|ref|YP_003274698.1| cytochrome b/b6 domain-containi... 759 0.0 gi|300784115|ref|YP_003764406.1| ubiquinol-cytochrome C reductas... 729 0.0 gi|302525356|ref|ZP_07277698.1| cytochrome b [Streptomyces sp. A... 729 0.0 gi|257055121|ref|YP_003132953.1| cytochrome b subunit of the bc ... 728 0.0 gi|134098270|ref|YP_001103931.1| cytochrome b, membrane protein ... 723 0.0 gi|324998036|ref|ZP_08119148.1| ubiquinol-cytochrome C reductase... 723 0.0 gi|225021890|ref|ZP_03711082.1| hypothetical protein CORMATOL_01... 721 0.0 gi|227833520|ref|YP_002835227.1| ubiquinol-cytochrome c reductas... 719 0.0 gi|227504666|ref|ZP_03934715.1| ubiquinol-cytochrome C reductase... 718 0.0 gi|10336543|dbj|BAB13773.1| cytochrome b subunit [Corynebacteriu... 717 0.0 >gi|308376941|ref|ZP_07668391.1| ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis SUMu008] gi|308349317|gb|EFP38168.1| ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis SUMu008] Length=555 Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/549 (100%), Positives = 549/549 (100%), Gaps = 0/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI Sbjct 7 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 66 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM Sbjct 67 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 126 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL Sbjct 127 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 186 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 187 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 246 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 247 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 306 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT Sbjct 307 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 366 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 367 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 426 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI Sbjct 427 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 486 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS Sbjct 487 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 546 Query 541 IMGSPDGEH 549 IMGSPDGEH Sbjct 547 IMGSPDGEH 555 >gi|15609333|ref|NP_216712.1| ubiquinol-cytochrome C reductase QcrB (cytochrome B subunit) [Mycobacterium tuberculosis H37Rv] gi|15841687|ref|NP_336724.1| cytochrome b, putative [Mycobacterium tuberculosis CDC1551] gi|31793375|ref|NP_855868.1| ubiquinol-cytochrome C reductase QcrB (cytochrome B subunit) [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=549 Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/549 (100%), Positives = 549/549 (100%), Gaps = 0/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI Sbjct 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM Sbjct 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL Sbjct 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT Sbjct 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI Sbjct 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS Sbjct 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 Query 541 IMGSPDGEH 549 IMGSPDGEH Sbjct 541 IMGSPDGEH 549 >gi|298525688|ref|ZP_07013097.1| ubiquinol-cytochrome C reductase qcrB (cytochrome B subunit) [Mycobacterium tuberculosis 94_M4241A] gi|298495482|gb|EFI30776.1| ubiquinol-cytochrome C reductase qcrB (cytochrome B subunit) [Mycobacterium tuberculosis 94_M4241A] Length=549 Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/549 (99%), Positives = 548/549 (99%), Gaps = 0/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSP NIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI Sbjct 1 MSPKLSPSNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM Sbjct 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL Sbjct 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT Sbjct 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI Sbjct 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS Sbjct 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 Query 541 IMGSPDGEH 549 IMGSPDGEH Sbjct 541 IMGSPDGEH 549 >gi|339295110|gb|AEJ47221.1| ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis CCDC5079] Length=549 Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/549 (99%), Positives = 547/549 (99%), Gaps = 0/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI Sbjct 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM Sbjct 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFF GAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL Sbjct 121 FAAAIMVHLARIFFAGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTW HWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 181 SSITLGMPVIGTWPHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT Sbjct 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI Sbjct 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS Sbjct 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 Query 541 IMGSPDGEH 549 IMGSPDGEH Sbjct 541 IMGSPDGEH 549 >gi|308375808|ref|ZP_07445174.2| ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis SUMu007] gi|308345006|gb|EFP33857.1| ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis SUMu007] Length=545 Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/545 (99%), Positives = 545/545 (100%), Gaps = 0/545 (0%) Query 5 LSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVY 64 +SPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVY Sbjct 1 MSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVY 60 Query 65 LTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAA 124 LTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAA Sbjct 61 LTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAA 120 Query 125 IMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSIT 184 IMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSIT Sbjct 121 IMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSIT 180 Query 185 LGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFP 244 LGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFP Sbjct 181 LGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFP 240 Query 245 GPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGS 304 GPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGS Sbjct 241 GPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGS 300 Query 305 QPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA 364 QPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA Sbjct 301 QPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA 360 Query 365 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP 424 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP Sbjct 361 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP 420 Query 425 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY 484 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY Sbjct 421 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY 480 Query 485 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGS 544 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGS Sbjct 481 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGS 540 Query 545 PDGEH 549 PDGEH Sbjct 541 PDGEH 545 >gi|289758316|ref|ZP_06517694.1| ubiquinol-cytochrome C reductase qcrB [Mycobacterium tuberculosis T85] gi|289713880|gb|EFD77892.1| ubiquinol-cytochrome C reductase qcrB [Mycobacterium tuberculosis T85] Length=549 Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/549 (99%), Positives = 546/549 (99%), Gaps = 0/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI Sbjct 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM Sbjct 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL Sbjct 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT Sbjct 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVP+ AIGA+ IAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 361 GDYAHHNLLQRPRDVPLPPAIGAITIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI Sbjct 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS Sbjct 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 Query 541 IMGSPDGEH 549 IMGSPDGEH Sbjct 541 IMGSPDGEH 549 >gi|240168255|ref|ZP_04746914.1| putative ubiquinol-cytochrome c reductase [Mycobacterium kansasii ATCC 12478] Length=552 Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/549 (93%), Positives = 531/549 (97%), Gaps = 0/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSP L PP IG+VLARQAED+DTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSF+VLLI Sbjct 1 MSPNLRPPKIGDVLARQAEDVDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFIVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM +VTYNGVYQPLRGVEMSRAY++ALDISFEVRGGLFVRQIHHWAALM Sbjct 61 TGVYLTLFFDPSMTEVTYNGVYQPLRGVEMSRAYETALDISFEVRGGLFVRQIHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEGYFGYSLPDDLLSG+GLRAAL Sbjct 121 FAAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNV+GVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 241 TQFPGPGRTEHNVIGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPA VWVA+IMGL+FVLL YPFLEKRFT Sbjct 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAAVWVALIMGLIFVLLIVYPFLEKRFT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRD PVRTA+GAMAIAFYMVLTLAAMNDIIA KFHISLNATTWIGRIGM Sbjct 361 GDYAHHNLLQRPRDAPVRTAVGAMAIAFYMVLTLAAMNDIIAFKFHISLNATTWIGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 V+LPPFVYF++YRW IGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVD+HGHP+ Sbjct 421 VVLPPFVYFLSYRWSIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDDHGHPL 480 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PL+YQGA +PKRMNKLGSAG+PGSGSFL AD +EDAALREAGHAAEQRAL ALRE+QDS Sbjct 481 PLEYQGAAVPKRMNKLGSAGAPGSGSFLSADPGSEDAALREAGHAAEQRALTALREYQDS 540 Query 541 IMGSPDGEH 549 I GSP+ EH Sbjct 541 IAGSPNDEH 549 >gi|15827402|ref|NP_301665.1| cytochrome B [Mycobacterium leprae TN] gi|221229879|ref|YP_002503295.1| putative cytochrome B [Mycobacterium leprae Br4923] gi|13432226|sp|P15878.3|QCRB_MYCLE RecName: Full=Ubiquinol-cytochrome c reductase cytochrome b subunit gi|13092952|emb|CAC31260.1| putative cytochrome B [Mycobacterium leprae] gi|219932986|emb|CAR70974.1| putative cytochrome B [Mycobacterium leprae Br4923] Length=551 Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/548 (93%), Positives = 525/548 (96%), Gaps = 1/548 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPK S P+IG+VLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSF+VLL+ Sbjct 1 MSPK-SVPDIGDVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFIVLLL 59 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM DVTYNGVYQPLRGVEMSRAYQS LDISFEVRGGLFVRQIHHWAALM Sbjct 60 TGVYLTLFFDPSMTDVTYNGVYQPLRGVEMSRAYQSTLDISFEVRGGLFVRQIHHWAALM 119 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 F AAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYS+PDDLLSG+GLRAAL Sbjct 120 FTAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSMPDDLLSGIGLRAAL 179 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLG+PVIGTWLHWALFGGDFPGTILIPRLYALHILL+PG+ILALIGLHLALVWFQKH Sbjct 180 SSITLGIPVIGTWLHWALFGGDFPGTILIPRLYALHILLIPGVILALIGLHLALVWFQKH 239 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTE+NVVGVRVMPVFAFKSGAFFAAIVGVLGLMGG LQINPIWNLGPYKPSQV Sbjct 240 TQFPGPGRTEYNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGFLQINPIWNLGPYKPSQV 299 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWP WEFYFWHHTIPAPVWVAVIM LVFVLL YPFLEKRFT Sbjct 300 SAGSQPDFYMMWTEGLARIWPAWEFYFWHHTIPAPVWVAVIMALVFVLLITYPFLEKRFT 359 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVPVRT+IGAMAI FYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 360 GDYAHHNLLQRPRDVPVRTSIGAMAITFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 419 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILP VYFITYRWCIGLQRSDR+VLEHG+ETGIIKRLPHGAYIELHQPLGPVD+HGHPI Sbjct 420 VILPLLVYFITYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPLGPVDDHGHPI 479 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PL+YQG +PKRMNKLGSAGSP SGSFLFAD +EDAALREA H AEQRAL ALREHQDS Sbjct 480 PLEYQGTAVPKRMNKLGSAGSPSSGSFLFADPVSEDAALREATHVAEQRALTALREHQDS 539 Query 541 IMGSPDGE 548 I SP+GE Sbjct 540 IASSPNGE 547 >gi|41408033|ref|NP_960869.1| QcrB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465099|ref|YP_881500.1| cytochrome b6 [Mycobacterium avium 104] gi|254774969|ref|ZP_05216485.1| cytochrome b6 [Mycobacterium avium subsp. avium ATCC 25291] gi|41396388|gb|AAS04252.1| QcrB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166386|gb|ABK67283.1| cytochrome b6 [Mycobacterium avium 104] Length=566 Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/558 (89%), Positives = 525/558 (95%), Gaps = 10/558 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPP IG+VLARQ EDIDTRYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+ Sbjct 1 MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM +VTYNGVYQPLRGVEMS+A+ SALDISFEVRGGLFVRQ+HHWAAL+ Sbjct 61 TGVYLTLFFDPSMAEVTYNGVYQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALI 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 F+AAIMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEGYFGYSLPDDLLSG+GLRAAL Sbjct 121 FSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFP----------GTILIPRLYALHILLLPGIILALIGL 230 SSITLGMPVIGTWLHWALFGGDFP +IPR+YALHILLLPGIILALIGL Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGL 240 Query 231 HLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIW 290 HLA+VWFQKHTQFPGPGRTEHNVVGVRVMPVFA KSGAFFAAIVGVLGLMGGLLQINPIW Sbjct 241 HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIW 300 Query 291 NLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLP 350 NLGPYKPS VSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPA VWVA+IMG VFVLL Sbjct 301 NLGPYKPSHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLI 360 Query 351 AYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLN 410 YPFLEKRF+GDYAHHNLLQRPRDVPVRT+IGAMAIAFYMVLTL+AMNDIIALKF ISLN Sbjct 361 IYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYMVLTLSAMNDIIALKFDISLN 420 Query 411 ATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPL 470 ATTWIGRIGMVI+PP VYF+TYRWCIGLQRSDR+VLEHG+ETGIIKRLPHGAYIELHQPL Sbjct 421 ATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL 480 Query 471 GPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRA 530 GPVDEHGHP+PL+YQGAPLPK+MNKLGSAGSPG GSFL+AD +EDAALREA HA+EQRA Sbjct 481 GPVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRA 540 Query 531 LAALREHQDSIMGSPDGE 548 L ALREHQDSI+GS +G Sbjct 541 LTALREHQDSIVGSTNGS 558 >gi|336461919|gb|EGO40772.1| cytochrome b subunit of the bc complex [Mycobacterium avium subsp. paratuberculosis S397] Length=566 Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/558 (89%), Positives = 524/558 (94%), Gaps = 10/558 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPP IG+VLARQ EDIDTRYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+ Sbjct 1 MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM +VTYNGVYQPLRGVEMS+A+ SALDISFEVRGGLFVRQ+HHWAAL+ Sbjct 61 TGVYLTLFFDPSMAEVTYNGVYQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALI 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 F+AAIMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEGYFGYSLPDDLLSG+GLRAAL Sbjct 121 FSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFP----------GTILIPRLYALHILLLPGIILALIGL 230 SSITLGMPVIGTWLHWALFGGDFP +IPR+YALHILLLPGIILALIGL Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGL 240 Query 231 HLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIW 290 HLA+VWFQKHTQFPGPGRTEHNVVGVRVMPVFA KSGAFFAAIVGVLGLMGGLLQINPIW Sbjct 241 HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIW 300 Query 291 NLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLP 350 NLGPYKPS VSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPA VWVA+IMG VFVLL Sbjct 301 NLGPYKPSHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLI 360 Query 351 AYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLN 410 YPFLEKRF+GDYAHHNLLQRP DVPVRT+IGAMAIAFYMVLTL+AMNDIIALKF ISLN Sbjct 361 IYPFLEKRFSGDYAHHNLLQRPIDVPVRTSIGAMAIAFYMVLTLSAMNDIIALKFDISLN 420 Query 411 ATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPL 470 ATTWIGRIGMVI+PP VYF+TYRWCIGLQRSDR+VLEHG+ETGIIKRLPHGAYIELHQPL Sbjct 421 ATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL 480 Query 471 GPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRA 530 GPVDEHGHP+PL+YQGAPLPK+MNKLGSAGSPG GSFL+AD +EDAALREA HA+EQRA Sbjct 481 GPVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRA 540 Query 531 LAALREHQDSIMGSPDGE 548 L ALREHQDSI+GS +G Sbjct 541 LTALREHQDSIVGSTNGS 558 >gi|254822832|ref|ZP_05227833.1| cytochrome b6 [Mycobacterium intracellulare ATCC 13950] Length=567 Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/558 (87%), Positives = 521/558 (94%), Gaps = 10/558 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPP IG+VLARQ EDIDTRYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+ Sbjct 1 MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM +VTYNG YQPLRGV+MS+A+ S LDISFEVRGGLFVRQ+HHWAAL+ Sbjct 61 TGVYLTLFFDPSMGEVTYNGAYQPLRGVDMSKAFASTLDISFEVRGGLFVRQVHHWAALI 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 F+A+IMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEGYFGYSLPDDLLSG+GLRAAL Sbjct 121 FSASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFP----------GTILIPRLYALHILLLPGIILALIGL 230 SSITLGMPVIGTWLHWALFGGDFP +IPR+YALHILLLPGIILALIGL Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPCGGVGNECATAGYIIPRMYALHILLLPGIILALIGL 240 Query 231 HLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIW 290 HLA+VWFQKHTQFPGPGRTEHNVVGVRVMPVFA KSGAFFAAIVGVLGL+GGLLQINPIW Sbjct 241 HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLLGGLLQINPIW 300 Query 291 NLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLP 350 NLGPYKPS VSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPA VWVA+IMG VF+LL Sbjct 301 NLGPYKPSHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGGVFILLI 360 Query 351 AYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLN 410 YPFLEKRF+GDYAHHNLLQRPRDVPVRT+IGAMAIAFYMVLTL+AMNDIIA KF ISLN Sbjct 361 IYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYMVLTLSAMNDIIAFKFDISLN 420 Query 411 ATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPL 470 ATTWIGRIGMVI+PP VYF+TYRWCIGLQRSDR+VLEHG+ETGIIKRLPHGAYIELHQPL Sbjct 421 ATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL 480 Query 471 GPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRA 530 GPVD+HGHP+PL+YQGA LPK+MNKLGSAG+PGSGSF+FAD A+EDAALREA H +EQRA Sbjct 481 GPVDDHGHPLPLEYQGAALPKKMNKLGSAGTPGSGSFMFADPASEDAALREAAHRSEQRA 540 Query 531 LAALREHQDSIMGSPDGE 548 L ALREHQDS+ GS +G Sbjct 541 LTALREHQDSLNGSTNGS 558 >gi|342859906|ref|ZP_08716559.1| cytochrome b6 [Mycobacterium colombiense CECT 3035] gi|342133038|gb|EGT86258.1| cytochrome b6 [Mycobacterium colombiense CECT 3035] Length=566 Score = 972 bits (2514), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/558 (87%), Positives = 518/558 (93%), Gaps = 10/558 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPP IG+VLARQ EDIDTRYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+ Sbjct 1 MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM ++TYNG YQPLRGV+MS+A+ S LDISFEVRGGLFVRQ+HHWAAL+ Sbjct 61 TGVYLTLFFDPSMAEITYNGAYQPLRGVDMSKAFASTLDISFEVRGGLFVRQVHHWAALI 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 F+A+IMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEGYFGYSLPDDLLSG+GLRAAL Sbjct 121 FSASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFP----------GTILIPRLYALHILLLPGIILALIGL 230 SSITLGMPVIGTWLHWALFGGDFP +IPR+Y+LHILLLPGIILALIGL Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPCGGVGNECATAGYIIPRMYSLHILLLPGIILALIGL 240 Query 231 HLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIW 290 HLA+VWFQKHTQFPGPGRTEHNVVGVRVMPVFA KSGAFFAAIVGVLGL+GGLLQINPIW Sbjct 241 HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLLGGLLQINPIW 300 Query 291 NLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLP 350 NLGPYKPS VSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPA VWVA+IMG VF LL Sbjct 301 NLGPYKPSHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGGVFGLLI 360 Query 351 AYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLN 410 YPFLEKRF+GDYAHHNLLQRPRDVPVRT+IGAMAIAFYM+LTL AMNDIIA KF ISLN Sbjct 361 VYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYMLLTLCAMNDIIAFKFDISLN 420 Query 411 ATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPL 470 ATTWIGRIGMVI+PP VYFITYRWCIGLQRSDR+VLEHG+ETGIIKRLPHGAY+ELHQPL Sbjct 421 ATTWIGRIGMVIVPPVVYFITYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYVELHQPL 480 Query 471 GPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRA 530 GPVD+HGHP+PL+YQGAPLPK+MNKLGSAGSPG GSFLFAD A+EDAALREA H +EQRA Sbjct 481 GPVDDHGHPLPLEYQGAPLPKKMNKLGSAGSPGRGSFLFADPASEDAALREAAHGSEQRA 540 Query 531 LAALREHQDSIMGSPDGE 548 L ALREHQD + GS +G Sbjct 541 LTALREHQDGLNGSTNGS 558 >gi|118618838|ref|YP_907170.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium ulcerans Agy99] gi|183983231|ref|YP_001851522.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium marinum M] gi|118570948|gb|ABL05699.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium ulcerans Agy99] gi|183176557|gb|ACC41667.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium marinum M] Length=561 Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/558 (89%), Positives = 526/558 (95%), Gaps = 10/558 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPP IG+VLARQAEDIDTRYHP+AALRRQ NKVFPTHWSFLLGE+ALYSF+VLLI Sbjct 1 MSPKLSPPKIGDVLARQAEDIDTRYHPAAALRRQFNKVFPTHWSFLLGEVALYSFIVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM+DVTYNGVYQPLRGVEMS+AY SALDISFEVRGGLFVRQ+HHWAALM Sbjct 61 TGVYLTLFFDPSMMDVTYNGVYQPLRGVEMSKAYASALDISFEVRGGLFVRQVHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRE NW+IGSLLLILAMFEGYFGYSLPDDLLSG+GLRAAL Sbjct 121 FAAAIMVHLARIFFTGAFRRPREANWIIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFP----------GTILIPRLYALHILLLPGIILALIGL 230 SSITLGMPVIGTWLHWALFGGDFP +IPR+Y+LHILLLPGIILALIG+ Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPCGGVGDDCTAAGYIIPRMYSLHILLLPGIILALIGM 240 Query 231 HLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIW 290 H+ALVWFQKHTQFPGPGRTEHNVVGVRVMPVFA KSGAFFAAI GVLGLMGGLLQINPIW Sbjct 241 HMALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAITGVLGLMGGLLQINPIW 300 Query 291 NLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLP 350 NLGPYKP+ VSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVA+IMGL+F+LL Sbjct 301 NLGPYKPAHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVALIMGLIFMLLI 360 Query 351 AYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLN 410 YPFLEKRFTGDYAHHNLLQRPRD PVRTA+GAMAI+FYM+LTLAAMNDIIALKFHISLN Sbjct 361 VYPFLEKRFTGDYAHHNLLQRPRDAPVRTAVGAMAISFYMLLTLAAMNDIIALKFHISLN 420 Query 411 ATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPL 470 ATTWIGRIGMVILPPFVYFI+YRW IGLQRSDR+VLEHG+ETGIIKRLPHGAYIELHQPL Sbjct 421 ATTWIGRIGMVILPPFVYFISYRWSIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL 480 Query 471 GPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRA 530 GPVDEHGHP+PL YQGAPLPKRMNKLGSAGSPGSGSFL AD A+EDAALREAGHAAE RA Sbjct 481 GPVDEHGHPLPLDYQGAPLPKRMNKLGSAGSPGSGSFLTADPASEDAALREAGHAAEHRA 540 Query 531 LAALREHQDSIMGSPDGE 548 L ALRE+QDS+ + +GE Sbjct 541 LTALREYQDSLNETSNGE 558 >gi|289574882|ref|ZP_06455109.1| ubiquinol-cytochrome C reductase qcrB [Mycobacterium tuberculosis K85] gi|289539313|gb|EFD43891.1| ubiquinol-cytochrome C reductase qcrB [Mycobacterium tuberculosis K85] Length=485 Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/480 (99%), Positives = 480/480 (100%), Gaps = 0/480 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI Sbjct 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM Sbjct 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL Sbjct 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH Sbjct 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV Sbjct 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT Sbjct 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM Sbjct 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHP+ Sbjct 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPL 480 >gi|296166064|ref|ZP_06848511.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898585|gb|EFG78144.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium parascrofulaceum ATCC BAA-614] Length=569 Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/551 (88%), Positives = 515/551 (94%), Gaps = 12/551 (2%) Query 10 IGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFF 69 IGEVLARQ EDIDTRYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+TGVYLTLFF Sbjct 13 IGEVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLLTGVYLTLFF 72 Query 70 DPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHL 129 DPSM ++TYNG YQPLRGV+MS+A+ S LDISFEVRGGLFVRQ+HHWAAL+FAAAIMVHL Sbjct 73 DPSMAEITYNGAYQPLRGVDMSKAFASTLDISFEVRGGLFVRQVHHWAALIFAAAIMVHL 132 Query 130 ARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPV 189 ARIFFTGAFRRPRE NWVIGSLLLILAMFEGYFGYSLPDDLLSG+GLRAALSSITLGMPV Sbjct 133 ARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAALSSITLGMPV 192 Query 190 IGTWLHWALFGGDFP-----------GTILIPRLYALHILLLPGIILALIGLHLALVWFQ 238 IGTWLHWALFGGDFP GTI IPR+YALHILLLPGIILALIGLHLA+VWFQ Sbjct 193 IGTWLHWALFGGDFPCGGVGNECATVGTI-IPRMYALHILLLPGIILALIGLHLAMVWFQ 251 Query 239 KHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPS 298 KHTQFPGPGRTEHNVVGVRVMP+FA KSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPS Sbjct 252 KHTQFPGPGRTEHNVVGVRVMPIFAVKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPS 311 Query 299 QVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKR 358 VSAGSQPDFYMMWTEGLARIWPPWEFYFWHHT+PAPVWVA++MGL+FVLL YPFLEKR Sbjct 312 HVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTVPAPVWVALLMGLIFVLLIIYPFLEKR 371 Query 359 FTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRI 418 F+GDYAHHNLLQRPRD PVRTAIGAMAIAFYMVLTL+AMNDIIALKF ISLNATTWIGRI Sbjct 372 FSGDYAHHNLLQRPRDAPVRTAIGAMAIAFYMVLTLSAMNDIIALKFQISLNATTWIGRI 431 Query 419 GMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGH 478 GMV+LPP VYF YRWCI LQRSDR VL HG+ETGIIKRLPHGAYIELHQPLGPVD+HGH Sbjct 432 GMVVLPPIVYFAAYRWCIALQRSDREVLAHGIETGIIKRLPHGAYIELHQPLGPVDDHGH 491 Query 479 PIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQ 538 PIPL+YQG LPKRMNKLGSAGSPGSGSFLFAD A+EDAALREA H++EQRAL ALREHQ Sbjct 492 PIPLEYQGTALPKRMNKLGSAGSPGSGSFLFADPASEDAALREAAHSSEQRALTALREHQ 551 Query 539 DSIMGSPDGEH 549 +SI+GS +G++ Sbjct 552 ESIVGSSNGKN 562 >gi|333990347|ref|YP_004522961.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium sp. JDM601] gi|333486315|gb|AEF35707.1| ubiquinol-cytochrome C reductase QcrB [Mycobacterium sp. JDM601] Length=542 Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/542 (85%), Positives = 500/542 (93%), Gaps = 3/542 (0%) Query 8 PNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTL 67 P IG++LARQA+DIDTRYHP+AALRRQ NKVFPTHWSFLLGEIALYSF++LL++GVYLTL Sbjct 3 PAIGDLLARQADDIDTRYHPAAALRRQFNKVFPTHWSFLLGEIALYSFIILLLSGVYLTL 62 Query 68 FFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMV 127 FFDPSM +V Y+GVYQPL GV+MSRAY++AL+ISFEVRGGLFVRQ+HHWAALMFAA+IMV Sbjct 63 FFDPSMAEVIYHGVYQPLNGVQMSRAYETALNISFEVRGGLFVRQLHHWAALMFAASIMV 122 Query 128 HLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGM 187 HLARIFFTGAFRRPRE NWV+GSLLLILAMFEGYFGYSLPDDLLSG+G+RAALSSITLGM Sbjct 123 HLARIFFTGAFRRPREANWVVGSLLLILAMFEGYFGYSLPDDLLSGIGIRAALSSITLGM 182 Query 188 PVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPG 247 PVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIG+H+ALVWFQKHTQFPGPG Sbjct 183 PVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGVHMALVWFQKHTQFPGPG 242 Query 248 RTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPD 307 RTE NVVGVRV+PVFA KSGAFFA I G+LGLMGGLLQIN IWNLGPY+PSQVSAGSQPD Sbjct 243 RTESNVVGVRVLPVFAIKSGAFFAIITGILGLMGGLLQINAIWNLGPYRPSQVSAGSQPD 302 Query 308 FYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHN 367 FYMMWTEG+AR+WP WEFY + HT+P V VA+IMG VF+LL YPFLEKRFTGDYAHHN Sbjct 303 FYMMWTEGMARLWPAWEFYPFGHTVPGSVGVALIMGAVFILLIIYPFLEKRFTGDYAHHN 362 Query 368 LLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFV 427 LLQRPRD PVRT IGAMAI+FYMVLTLAAMNDIIA KFHISLNATTWIGRIGMVILPP + Sbjct 363 LLQRPRDAPVRTGIGAMAISFYMVLTLAAMNDIIAWKFHISLNATTWIGRIGMVILPPIM 422 Query 428 YFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGA 487 +F TYRWC+GLQRSDR VLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPL+Y GA Sbjct 423 FFATYRWCLGLQRSDRDVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLEYAGA 482 Query 488 PLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGSPDG 547 PLPKRMNKLGS G+PG GSFL AD A+EDAAL EA HA+E+RAL AL E QD G +G Sbjct 483 PLPKRMNKLGSGGAPGRGSFLTADPASEDAALNEAAHASERRALTALAERQD---GDGNG 539 Query 548 EH 549 + Sbjct 540 QQ 541 >gi|118471438|ref|YP_888540.1| ubiquinol-cytochrome C reductase cytochrome b subunit [Mycobacterium smegmatis str. MC2 155] gi|118172725|gb|ABK73621.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium smegmatis str. MC2 155] Length=546 Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/544 (83%), Positives = 489/544 (90%), Gaps = 2/544 (0%) Query 8 PNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTL 67 P+ ++ A Q + ID+RYHPSAA+RRQLNKVFPTHWSFLLGEIALYSF++LL+TGV+LTL Sbjct 3 PDFAKLAAAQGDAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLLTGVWLTL 62 Query 68 FFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMV 127 FFDPSM VTY+GVYQPLRGV+MSRAY++ALDISFEVRGGLFVRQ+HHWAALMFAA+IMV Sbjct 63 FFDPSMAHVTYDGVYQPLRGVQMSRAYETALDISFEVRGGLFVRQVHHWAALMFAASIMV 122 Query 128 HLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGM 187 HLARIFFTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG G+RAALS IT+G+ Sbjct 123 HLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGIRAALSGITMGI 182 Query 188 PVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPG 247 PVIGTW+HWALFGGDFPG ILIPRLYALHILL+PGIILALIG HLALVWFQKHTQFPGPG Sbjct 183 PVIGTWMHWALFGGDFPGEILIPRLYALHILLIPGIILALIGAHLALVWFQKHTQFPGPG 242 Query 248 RTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPD 307 RTE NVVGVRVMPVFA KSGAFFA I GVLGLMGGLL INPIWNLGPYKPSQVSAGSQPD Sbjct 243 RTETNVVGVRVMPVFAVKSGAFFAMITGVLGLMGGLLTINPIWNLGPYKPSQVSAGSQPD 302 Query 308 FYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHN 367 FYMMWT+GL R+WP WEFY + HTIP VWVAV MGLVF LL AYPF+EK+ TGD AHHN Sbjct 303 FYMMWTDGLIRLWPAWEFYPFGHTIPQGVWVAVGMGLVFALLIAYPFIEKKVTGDDAHHN 362 Query 368 LLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFV 427 LLQRPRDVPVRTAIG+MAIA Y++LT A MNDIIALKFHISLNATTWIGRIGMV+LP V Sbjct 363 LLQRPRDVPVRTAIGSMAIALYLLLTFACMNDIIALKFHISLNATTWIGRIGMVVLPAIV 422 Query 428 YFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGA 487 YF+ YRW I LQRSDR VLEHGVETGIIKRLPHGAY+ELHQPLGPVDEHGHPIPL+Y GA Sbjct 423 YFVAYRWAISLQRSDREVLEHGVETGIIKRLPHGAYVELHQPLGPVDEHGHPIPLEYAGA 482 Query 488 PLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGS--P 545 PLPKRMNKLGS G+PG+GSFLF D A E AL EA HA+E ++L AL+EHQD I G+ Sbjct 483 PLPKRMNKLGSGGAPGTGSFLFPDPAVEHEALTEAAHASEHKSLTALKEHQDRIHGNGET 542 Query 546 DGEH 549 +G H Sbjct 543 NGHH 546 >gi|145223540|ref|YP_001134218.1| cytochrome b/b6 domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315443886|ref|YP_004076765.1| cytochrome b subunit of the bc complex [Mycobacterium sp. Spyr1] gi|145216026|gb|ABP45430.1| menaquinol-cytochrome c reductase cytochrome b subunit precursor [Mycobacterium gilvum PYR-GCK] gi|315262189|gb|ADT98930.1| cytochrome b subunit of the bc complex [Mycobacterium sp. Spyr1] Length=557 Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/550 (81%), Positives = 493/550 (90%), Gaps = 6/550 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSP+L + V A+Q + ID+RYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+ Sbjct 1 MSPRL---DAATVAAKQGDAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL 57 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGVYLTLFFDPSM VTY+GVYQPLRGV MSRAY++ LDISFEVRGGLFVRQ+HHWAAL+ Sbjct 58 TGVYLTLFFDPSMAHVTYDGVYQPLRGVGMSRAYETTLDISFEVRGGLFVRQVHHWAALL 117 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAA+IMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG G+RAAL Sbjct 118 FAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGIRAAL 177 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 S IT+G+PV+GTW+HWALFGGDFPG ILIPRLYALHILL+PGIILALIG+HLALVWFQKH Sbjct 178 SGITMGIPVVGTWMHWALFGGDFPGEILIPRLYALHILLIPGIILALIGVHLALVWFQKH 237 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTE NVVGVRVMPVFA KSGAFFA VG+LGLMGGLLQINP+WN+GPY PSQV Sbjct 238 TQFPGPGRTETNVVGVRVMPVFAVKSGAFFAVTVGILGLMGGLLQINPVWNIGPYNPSQV 297 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWT+GL R+WP WEFY + HTIP VWVA+ MGL+F+LL AYPF+EK+ T Sbjct 298 SAGSQPDFYMMWTDGLIRLWPAWEFYPFGHTIPQGVWVALAMGLIFMLLGAYPFIEKKLT 357 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GD AHHNLLQRPRD P RTA+GA AIAFY+VLT A MNDIIALKFHISLNATTWIGR+GM Sbjct 358 GDNAHHNLLQRPRDAPTRTAVGAAAIAFYIVLTFACMNDIIALKFHISLNATTWIGRVGM 417 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 V+LP VYF+TYRW + LQRSDR+VLEHGVETGIIKRLPHGAY+ELHQPLGPVD+HGHP+ Sbjct 418 VLLPAIVYFVTYRWAVALQRSDRAVLEHGVETGIIKRLPHGAYVELHQPLGPVDDHGHPL 477 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQD- 539 PL+YQGA LPKRMNKLGSAG+PGSGSFL AD +E A+ EA HAAE RAL ALREHQ+ Sbjct 478 PLEYQGAALPKRMNKLGSAGAPGSGSFLKADPLSEHEAIAEATHAAEHRALTALREHQER 537 Query 540 --SIMGSPDG 547 + GS DG Sbjct 538 SSAPNGSSDG 547 >gi|120404531|ref|YP_954360.1| cytochrome b/b6 domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957349|gb|ABM14354.1| menaquinol-cytochrome c reductase cytochrome b subunit precursor [Mycobacterium vanbaalenii PYR-1] Length=549 Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/552 (81%), Positives = 491/552 (89%), Gaps = 6/552 (1%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MSP+ P E+ ARQ ID+RYHPSAA+RRQLNKVFPTHWSFLLGEIA+YSF+VLL+ Sbjct 1 MSPR---PTAAEIAARQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL 57 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 TGV+LTLFFDPSM VTY+GVYQPLRGV MSRAY++ LDISFEVRGGLFVRQ+HHWAAL+ Sbjct 58 TGVWLTLFFDPSMAHVTYDGVYQPLRGVGMSRAYETTLDISFEVRGGLFVRQVHHWAALL 117 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAA+IMVHLARIFFTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG G+RAAL Sbjct 118 FAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGIRAAL 177 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 S IT+G+P++GTW+HWALFGGDFPG ILIPRLYALHILL+PGIILALIG+HLALVWFQKH Sbjct 178 SGITMGIPIVGTWMHWALFGGDFPGDILIPRLYALHILLIPGIILALIGVHLALVWFQKH 237 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTE NVVGVRVMPVFA KSGAFFA VGVLGLMGGLLQINP+W +GPYKPSQV Sbjct 238 TQFPGPGRTETNVVGVRVMPVFAVKSGAFFAMTVGVLGLMGGLLQINPVWTIGPYKPSQV 297 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYMMWT+GL R+WP WEFY + HTIP VWVAV MGL+F LL AYPF+EK+ + Sbjct 298 SAGSQPDFYMMWTDGLIRLWPAWEFYPFGHTIPQGVWVAVGMGLIFTLLAAYPFIEKKLS 357 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 GD AHHNLLQRPRD P RTA+GA AIAFY+VLT A MNDIIALKFHISLNATTWIGR+GM Sbjct 358 GDDAHHNLLQRPRDAPTRTAVGAAAIAFYIVLTFACMNDIIALKFHISLNATTWIGRVGM 417 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 V+LP VYF+ YRW +GLQRSDR+VLEHGVETGIIKRLPHGAY+ELHQPLGPVDEHGHPI Sbjct 418 VVLPAIVYFVAYRWAVGLQRSDRAVLEHGVETGIIKRLPHGAYVELHQPLGPVDEHGHPI 477 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PL+YQGA LPKRMNKLGSAG+PGSGSFL D +E AL EA HAAE+RAL ALREHQ+ Sbjct 478 PLEYQGAALPKRMNKLGSAGAPGSGSFLKGDPLSEHEALDEAAHAAERRALTALREHQER 537 Query 541 IM---GSPDGEH 549 GS +G H Sbjct 538 TSASNGSSNGHH 549 >gi|169629053|ref|YP_001702702.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium abscessus ATCC 19977] gi|169241020|emb|CAM62048.1| Probable ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium abscessus] Length=546 Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/525 (79%), Positives = 466/525 (89%), Gaps = 0/525 (0%) Query 15 ARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMV 74 A+QAE +D+RYH +A ++RQ+NKVFPTHWSF+LGEIALYSF+VLL++GVYLTLFFDPSM Sbjct 12 AKQAEAMDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIVLLLSGVYLTLFFDPSMS 71 Query 75 DVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFF 134 +VTYNG+YQPLRGV+MS+AY++ L+ISFEVRGGLFVRQIHHWAALMFAA+IMVH+ARIFF Sbjct 72 EVTYNGIYQPLRGVQMSKAYETTLNISFEVRGGLFVRQIHHWAALMFAASIMVHMARIFF 131 Query 135 TGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWL 194 TGAFRRPRE NWVIG+LL ILAMFEG+FGYSLPDDLLSG G+RAALS IT+G+P+IGTW+ Sbjct 132 TGAFRRPREANWVIGALLFILAMFEGFFGYSLPDDLLSGTGIRAALSGITMGLPLIGTWM 191 Query 195 HWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVV 254 HWALFGGDFPG ILIPRLYA+HILL+P IILALIG+HLALVW+QKHTQFPGPG TE NVV Sbjct 192 HWALFGGDFPGNILIPRLYAMHILLIPAIILALIGIHLALVWYQKHTQFPGPGATEKNVV 251 Query 255 GVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTE 314 GVR++PVFA K G+FFA +L LM GLLQINPIW LGPYKPSQ+SAGSQPDFYMMWT+ Sbjct 252 GVRILPVFALKGGSFFAFTTAILALMSGLLQINPIWVLGPYKPSQISAGSQPDFYMMWTD 311 Query 315 GLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRD 374 GL RI P WE Y + HTIP VWVAV MGLVF LL AYPFLEK+ TGD AHHNLLQRPRD Sbjct 312 GLLRIIPAWEIYPFGHTIPQAVWVAVGMGLVFGLLIAYPFLEKKLTGDDAHHNLLQRPRD 371 Query 375 VPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYRW 434 PVRTAIG+ AI+ YM+ TL MNDIIALKFHISLNATTWIGRIGMVILP VY+I YRW Sbjct 372 APVRTAIGSAAISLYMLFTLMCMNDIIALKFHISLNATTWIGRIGMVILPAVVYYIAYRW 431 Query 435 CIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMN 494 IGLQRSDR+VLEHG+ETGIIKRLPHG YIE+HQPL VDEHGH IPL+YQGAP+P+RMN Sbjct 432 AIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQRMN 491 Query 495 KLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQD 539 KLGSAG+PG+GSFLFAD A E AL EA H A ++L AL+E+QD Sbjct 492 KLGSAGAPGTGSFLFADPADEQHALAEAEHEAHHKSLLALKEYQD 536 >gi|108800260|ref|YP_640457.1| cytochrome b/b6-like protein [Mycobacterium sp. MCS] gi|119869388|ref|YP_939340.1| cytochrome b/b6 domain-containing protein [Mycobacterium sp. KMS] gi|108770679|gb|ABG09401.1| menaquinol-cytochrome c reductase cytochrome b subunit precursor [Mycobacterium sp. MCS] gi|119695477|gb|ABL92550.1| menaquinol-cytochrome c reductase cytochrome b subunit precursor [Mycobacterium sp. KMS] Length=558 Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/546 (82%), Positives = 484/546 (89%), Gaps = 10/546 (1%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 LA Q ID+RYHPSAA+RRQLNKVFPTHWSFLLGEIALYSF++LLITGV+LTLFFDPSM Sbjct 13 LAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLITGVWLTLFFDPSM 72 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 +V Y+GVYQPLRGVEMS+AY+SALDISFEVRGGLFVRQIHHWAAL+FAA+IMVHLARIF Sbjct 73 SEVVYDGVYQPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLFAASIMVHLARIF 132 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG GLRAALS IT+G+PV+GTW Sbjct 133 FTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALSGITMGIPVVGTW 192 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 +HWALFGGDFPGTI+IPRLYALHILL+PGI+LALI HLALVWFQKHTQFPGPGRTE NV Sbjct 193 MHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHTQFPGPGRTEKNV 252 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVRVMPVFA KSGAFFA VG+LGLMGGLLQINPIW LGPYKPSQVSAGSQPDFYMMWT Sbjct 253 VGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVSAGSQPDFYMMWT 312 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +GL R+WP WEFY ++TIP PVW+AV+MGL+ LL YPFLEKR TGD AHHNLLQRPR Sbjct 313 DGLIRLWPAWEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTGDDAHHNLLQRPR 372 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 D PVRTAIGAMAIAFY++LT A MNDIIALKFHISLNATTWIGRIGMV+LP VY++TYR Sbjct 373 DAPVRTAIGAMAIAFYILLTFACMNDIIALKFHISLNATTWIGRIGMVVLPVIVYYVTYR 432 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 W + LQRSDR VLEHG+ETGIIKRLPHGAYIELHQPLGPVD HGHPIPL+YQGAPLPKRM Sbjct 433 WAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIPLEYQGAPLPKRM 492 Query 494 NKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSI----------MG 543 NKLGS G+PGSGSFL AD E AL EA HA+ +RAL ALRE Q + G Sbjct 493 NKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTNGSNGAANGDGDG 552 Query 544 SPDGEH 549 SP+G H Sbjct 553 SPNGHH 558 >gi|126435883|ref|YP_001071574.1| cytochrome b/b6 domain-containing protein [Mycobacterium sp. JLS] gi|126235683|gb|ABN99083.1| menaquinol-cytochrome c reductase cytochrome b subunit precursor [Mycobacterium sp. JLS] Length=558 Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/546 (82%), Positives = 484/546 (89%), Gaps = 10/546 (1%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 LA Q ID+RYHPSAA+RRQLNKVFPTHWSFLLGEIALYSF++LLITGV+LTLFFDPSM Sbjct 13 LAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLITGVWLTLFFDPSM 72 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 +V Y+GVYQPLRGVEMS+AY+SALDISFEVRGGLFVRQIHHWAAL+FAA+IMVHLARIF Sbjct 73 SEVVYDGVYQPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLFAASIMVHLARIF 132 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG GLRAALS IT+G+PV+GTW Sbjct 133 FTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALSGITMGIPVVGTW 192 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 +HWALFGGDFPGTI+IPRLYALHILL+PGI+LALI HLALVWFQKHTQFPGPGRTE NV Sbjct 193 MHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHTQFPGPGRTEKNV 252 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVRVMPVFA KSGAFFA VG+LGLMGGLLQINPIW LGPYKPSQVSAGSQPDFYMMWT Sbjct 253 VGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVSAGSQPDFYMMWT 312 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +GL R+WP WEFY ++TIP PVW+AV+MGL+ LL YPFLEKR TGD AHHNLLQRPR Sbjct 313 DGLIRLWPAWEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTGDDAHHNLLQRPR 372 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 D PVRTAIGAMAI+FY++LT A MNDIIALKFHISLNATTWIGRIGMV+LP VY++TYR Sbjct 373 DAPVRTAIGAMAISFYILLTFACMNDIIALKFHISLNATTWIGRIGMVVLPVIVYYVTYR 432 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 W + LQRSDR VLEHG+ETGIIKRLPHGAYIELHQPLGPVD HGHPIPL+YQGAPLPKRM Sbjct 433 WAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIPLEYQGAPLPKRM 492 Query 494 NKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSI----------MG 543 NKLGS G+PGSGSFL AD E AL EA HA+ +RAL ALRE Q + G Sbjct 493 NKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTNGSNGAANGDGDG 552 Query 544 SPDGEH 549 SP+G H Sbjct 553 SPNGHH 558 >gi|54023697|ref|YP_117939.1| putative cytochrome b component [Nocardia farcinica IFM 10152] gi|54015205|dbj|BAD56575.1| putative cytochrome b component [Nocardia farcinica IFM 10152] Length=543 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/527 (75%), Positives = 456/527 (87%), Gaps = 0/527 (0%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 +A QA ++D RY +A ++R +NKVFPTHWSFLLGEIALYSF++LL++GVYLTL+FDPSM Sbjct 5 VAAQANEMDERYRAAAFVKRSINKVFPTHWSFLLGEIALYSFIILLLSGVYLTLYFDPSM 64 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 V Y+G YQPLRGV MSRAY++AL ISFEVRGGLFVRQ+HHWAAL+FAA+I+VHL RIF Sbjct 65 AHVVYDGAYQPLRGVGMSRAYETALQISFEVRGGLFVRQVHHWAALLFAASIIVHLFRIF 124 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFR+PRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG GLRAA S IT+G+PVIGTW Sbjct 125 FTGAFRKPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAAFSGITIGIPVIGTW 184 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 +HW +FGGDFPG I+IPRLY H+LL PGI+LALI H+ALVW+QKHTQFPGPGRTE+NV Sbjct 185 IHWLIFGGDFPGEIIIPRLYIAHVLLFPGIMLALIAAHIALVWYQKHTQFPGPGRTENNV 244 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VG R++PVFA GAFFA +G++GLMGGL QINPIWNLGPY PSQVSAGSQPDFYMMWT Sbjct 245 VGARIVPVFAADQGAFFAFTLGIVGLMGGLFQINPIWNLGPYNPSQVSAGSQPDFYMMWT 304 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +G+AR+ PPWE Y +TIPA WVA++MGLVF +L AYP++EKR TGD HHNLLQRPR Sbjct 305 DGMARLMPPWELYLGRYTIPAVFWVALVMGLVFTVLIAYPWIEKRLTGDDVHHNLLQRPR 364 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 D PVRTAIGAMAIAFY+VLTL+ +NDIIALKF ISLNATTWIGRIGM++ PP YF TYR Sbjct 365 DAPVRTAIGAMAIAFYVVLTLSCVNDIIALKFDISLNATTWIGRIGMLVAPPLAYFFTYR 424 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 +CIGLQRSDR VLEHG+ETG+IKRLPHG YIE+HQPLGPVD+HGHPIPL+YQGAP+PK+M Sbjct 425 FCIGLQRSDRQVLEHGIETGVIKRLPHGEYIEVHQPLGPVDDHGHPIPLEYQGAPVPKKM 484 Query 494 NKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 NKLGSAG PG+GSFLF D E E HAAEQ+ L AL + Q+ Sbjct 485 NKLGSAGKPGTGSFLFPDPPQESERNFELEHAAEQKQLEALAKAQEK 531 >gi|312140189|ref|YP_004007525.1| ubiquinol-cytochrome c reductase petb [Rhodococcus equi 103S] gi|311889528|emb|CBH48845.1| ubiquinol-cytochrome c reductase PetB [Rhodococcus equi 103S] Length=550 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/529 (77%), Positives = 460/529 (87%), Gaps = 1/529 (0%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 +A QAE +D+RYH +A ++RQ+NKVFPTHWSF+LGEIALYSF++LLI+GVYLTLFFDPS+ Sbjct 9 VAAQAEGVDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIILLISGVYLTLFFDPSL 68 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 +VTYNG Y+PLRGVEMSRAY + LDISFEVRGGLFVRQIHHWAALMFAA+I+VHL RIF Sbjct 69 AEVTYNGAYEPLRGVEMSRAYATTLDISFEVRGGLFVRQIHHWAALMFAASIIVHLLRIF 128 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG GLRAALS ITL +PV GTW Sbjct 129 FTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALSGITLSVPVAGTW 188 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 LHW +FGGDFPGT++IPRLY H+LLLPGIILALI HLALVW+QKHTQFPGPGRTE NV Sbjct 189 LHWLIFGGDFPGTLIIPRLYVAHVLLLPGIILALIAAHLALVWYQKHTQFPGPGRTEKNV 248 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVR++PVFA K GAFFA GVL LMGGLLQINPIWN+GPY PSQVSAGSQPDFYMMWT Sbjct 249 VGVRILPVFALKGGAFFAFTFGVLALMGGLLQINPIWNIGPYNPSQVSAGSQPDFYMMWT 308 Query 314 EGLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRP 372 +GLAR+WP WE Y F +T+PA VAVIMGLVF LL AYP++EK+FT D AHHNLLQRP Sbjct 309 DGLARLWPAWELYLFDRYTVPAVFAVAVIMGLVFALLIAYPWIEKKFTKDDAHHNLLQRP 368 Query 373 RDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITY 432 RDVPVRT IGAMAIAFY+VLT++ +NDIIA ISLNA TWIGRIGMVILPP Y++TY Sbjct 369 RDVPVRTGIGAMAIAFYLVLTISCINDIIAYHLDISLNAMTWIGRIGMVILPPVAYYVTY 428 Query 433 RWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKR 492 R+C+GLQRSDR+VLEHG+ETGIIKRLPHG Y+E+HQPLGPVD+HGHPIPL+YQGA +PK+ Sbjct 429 RFCLGLQRSDRAVLEHGIETGIIKRLPHGEYVEIHQPLGPVDDHGHPIPLEYQGAAIPKK 488 Query 493 MNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSI 541 MNKLGSAG PGSGS++ D + AL A H AE L L E+QD I Sbjct 489 MNKLGSAGKPGSGSWVTPDPVEQSQALEAADHKAEHEQLKMLTEYQDRI 537 >gi|325676929|ref|ZP_08156601.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus equi ATCC 33707] gi|325552229|gb|EGD21919.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus equi ATCC 33707] Length=550 Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/529 (77%), Positives = 460/529 (87%), Gaps = 1/529 (0%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 +A QAE +D+RYH +A ++RQ+NKVFPTHWSF+LGEIALYSF++LLI+GVYLTLFFDPS+ Sbjct 9 VAAQAEGVDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIILLISGVYLTLFFDPSL 68 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 +VTYNG Y+PLRGVEMSRAY + LDISFEVRGGLFVRQIHHWAALMFAA+I+VHL RIF Sbjct 69 AEVTYNGAYEPLRGVEMSRAYATTLDISFEVRGGLFVRQIHHWAALMFAASIIVHLLRIF 128 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG GLRAALS ITL +PV GTW Sbjct 129 FTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALSGITLSVPVAGTW 188 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 LHW +FGGDFPGT++IPRLY H+LLLPGIILALI HLALVW+QKHTQFPGPGRTE NV Sbjct 189 LHWLIFGGDFPGTLIIPRLYVAHVLLLPGIILALIAAHLALVWYQKHTQFPGPGRTEKNV 248 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVR++PVFA K GAFFA GVL LMGGLLQINPIWN+GPY PSQVSAGSQPDFYMMWT Sbjct 249 VGVRILPVFALKGGAFFAFTFGVLALMGGLLQINPIWNIGPYNPSQVSAGSQPDFYMMWT 308 Query 314 EGLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRP 372 +GLAR+WP WE Y F +T+PA VAVIMGLVF LL AYP++EK+FT D AHHNLLQRP Sbjct 309 DGLARLWPAWELYLFDRYTVPAVFAVAVIMGLVFALLIAYPWIEKKFTKDDAHHNLLQRP 368 Query 373 RDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITY 432 RDVPVRT IGAMAIAFY+VLT++ +NDIIA ISLNA TWIGRIGMVILPP Y++TY Sbjct 369 RDVPVRTGIGAMAIAFYLVLTISCINDIIAYHLDISLNAMTWIGRIGMVILPPVAYYVTY 428 Query 433 RWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKR 492 R+C+GLQRSDR+VLEHG+ETGIIKRLPHG Y+E+HQPLGPVD+HGHP+PL+YQGA +PK+ Sbjct 429 RFCLGLQRSDRAVLEHGIETGIIKRLPHGEYVEIHQPLGPVDDHGHPLPLEYQGAAIPKK 488 Query 493 MNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSI 541 MNKLGSAG PGSGS++ D + AL A H AE L L E+QD I Sbjct 489 MNKLGSAGKPGSGSWVTPDPVEQSQALEAADHKAEHEQLKMLTEYQDRI 537 >gi|111018146|ref|YP_701118.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus jostii RHA1] gi|110817676|gb|ABG92960.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus jostii RHA1] Length=560 Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/535 (74%), Positives = 451/535 (85%), Gaps = 1/535 (0%) Query 6 SPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYL 65 P + + QAE +D+RYH +A +RRQ+NKVFPTHWSFLLGEIALYSFV+LLI+GVYL Sbjct 5 KPSKLSAMATGQAEAMDSRYHLAAGMRRQINKVFPTHWSFLLGEIALYSFVILLISGVYL 64 Query 66 TLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAI 125 TLFFDPSM V YNG Y+PLRGV MSRAY++ L+ISFEVRGGLFVRQIHHWAALMFAA+I Sbjct 65 TLFFDPSMAHVVYNGAYEPLRGVTMSRAYETTLNISFEVRGGLFVRQIHHWAALMFAASI 124 Query 126 MVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITL 185 +VHL RIFFTGAFRRPRE NWVIG LLLILAMFEG+FGY++PDDLLSG GLRAA S ITL Sbjct 125 VVHLMRIFFTGAFRRPREANWVIGCLLLILAMFEGFFGYTIPDDLLSGTGLRAAFSGITL 184 Query 186 GMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPG 245 +P+ GTW+HW +FGGDFPG ++IPRLY H+LL PGIILALI HLALVW+QKHTQFPG Sbjct 185 SIPIAGTWMHWLIFGGDFPGDLIIPRLYVAHVLLFPGIILALIAGHLALVWYQKHTQFPG 244 Query 246 PGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQ 305 PGRTE+NVVGVR++PVFA KSGAFFA GVL +MGG+LQINP+W +GPY PSQVSAGSQ Sbjct 245 PGRTENNVVGVRILPVFAVKSGAFFAITFGVLAVMGGVLQINPVWTIGPYNPSQVSAGSQ 304 Query 306 PDFYMMWTEGLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA 364 PD YMMWT+GLAR+WP W+ Y F +TIP+ VA+IMGLVF +L AYP++EKR T D A Sbjct 305 PDIYMMWTDGLARLWPAWDIYLFDRYTIPSVFAVALIMGLVFTVLIAYPWIEKRLTKDDA 364 Query 365 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP 424 HHNLLQRPRDVPVRTAIGAMAIAFY VLT++ +NDIIA ISLNA TWIGRIGMV+LP Sbjct 365 HHNLLQRPRDVPVRTAIGAMAIAFYAVLTISCINDIIAYHLSISLNAMTWIGRIGMVLLP 424 Query 425 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY 484 P +F+ YR+C+GLQRSDR VLEHG+ETGIIKR+P+G YIE+HQPLGPVD+HGHPIPL+Y Sbjct 425 PIAFFVAYRFCLGLQRSDREVLEHGIETGIIKRMPNGQYIEIHQPLGPVDDHGHPIPLEY 484 Query 485 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQD 539 QGA +PK+MNKLGSAG PGSGS + AD E AL A H E L LRE+QD Sbjct 485 QGATVPKKMNKLGSAGKPGSGSLVTADPVEESLALEHALHHGEHEQLTMLREYQD 539 >gi|226360275|ref|YP_002778053.1| menaquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus opacus B4] gi|226238760|dbj|BAH49108.1| menaquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus opacus B4] Length=560 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/535 (74%), Positives = 451/535 (85%), Gaps = 1/535 (0%) Query 6 SPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYL 65 P + + A QAE +D+RYH +A +RRQ+NKVFPTHWSFLLGEIALYSFV+LLI+GVYL Sbjct 5 KPSKLSAMAAGQAEAMDSRYHLAAGMRRQINKVFPTHWSFLLGEIALYSFVILLISGVYL 64 Query 66 TLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAI 125 TLFFDPSM V YNG Y+PLRGV MSRAY++ L+ISFEVRGGLFVRQIHHWAALMFAA+I Sbjct 65 TLFFDPSMAHVVYNGAYEPLRGVTMSRAYETTLNISFEVRGGLFVRQIHHWAALMFAASI 124 Query 126 MVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITL 185 +VHL RIFFTGAFRRPRE NWVIG LLLILAMFEG+FGY++PDDLLSG GLRAA S ITL Sbjct 125 VVHLLRIFFTGAFRRPREANWVIGCLLLILAMFEGFFGYTIPDDLLSGTGLRAAFSGITL 184 Query 186 GMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPG 245 +P+ GTW+HW +FGGDFPG ++IPRLY H+LL PGIILALI HLALVW+QKHTQFPG Sbjct 185 SIPIAGTWMHWLIFGGDFPGDLIIPRLYVAHVLLFPGIILALIAGHLALVWYQKHTQFPG 244 Query 246 PGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQ 305 PGRTE NVVGVR++PVFA KSGAFFA GVL +MGG+LQINP+W +GPY P+QVSAGSQ Sbjct 245 PGRTETNVVGVRILPVFAVKSGAFFAITFGVLAVMGGVLQINPVWTIGPYNPAQVSAGSQ 304 Query 306 PDFYMMWTEGLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA 364 PD YMMWT+GLAR+WP W+ Y F +TIP+ VA+IMGLVF +L AYP++EKR T D A Sbjct 305 PDIYMMWTDGLARLWPAWDIYLFDRYTIPSVFAVALIMGLVFTVLIAYPWIEKRLTKDDA 364 Query 365 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP 424 HHNLLQRPRDVPVRTAIGAMAIAFY VLT++ +NDIIA ISLNA TWIGRIGMV+LP Sbjct 365 HHNLLQRPRDVPVRTAIGAMAIAFYAVLTISCINDIIAYHLSISLNAMTWIGRIGMVLLP 424 Query 425 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY 484 P +F+ YR+C+GLQRSDR VLEHG+ETGIIKR+P+G YIE+HQPLGPVD+HGHPIPL+Y Sbjct 425 PIAFFVAYRFCLGLQRSDREVLEHGIETGIIKRMPNGQYIEIHQPLGPVDDHGHPIPLEY 484 Query 485 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQD 539 QGA +PK+MNKLGSAG PGSGS + AD E AL A H E L LRE+QD Sbjct 485 QGATVPKKMNKLGSAGKPGSGSLVTADPVEESLALEHALHHGEHEQLTMLREYQD 539 >gi|343924166|ref|ZP_08763729.1| menaquinol-cytochrome c reductase cytochrome b subunit [Gordonia alkanivorans NBRC 16433] gi|343765971|dbj|GAA10655.1| menaquinol-cytochrome c reductase cytochrome b subunit [Gordonia alkanivorans NBRC 16433] Length=540 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/530 (73%), Positives = 446/530 (85%), Gaps = 0/530 (0%) Query 9 NIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLF 68 I + L QAE++D+RYH +A +RRQ+NKVFPTHWSF+LGEIALYSF++LLI+GVYL+LF Sbjct 2 TIADRLGTQAEEVDSRYHLAAGMRRQINKVFPTHWSFMLGEIALYSFIILLISGVYLSLF 61 Query 69 FDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVH 128 FDPSM V Y+G YQPL GV M++AY++ LD+SFEVRGGLFVRQIHHWAAL+FAA+I++H Sbjct 62 FDPSMTQVVYDGAYQPLNGVMMTKAYETTLDLSFEVRGGLFVRQIHHWAALLFAASIIIH 121 Query 129 LARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMP 188 +ARIFFTGAFRRPRE NW+IG LLLILAMFEG+FGYSLPDDLLSG G+RAA+S I LG+P Sbjct 122 MARIFFTGAFRRPREANWIIGCLLLILAMFEGFFGYSLPDDLLSGTGVRAAMSGIVLGIP 181 Query 189 VIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGR 248 V+GTW+HWALFGGDFPG I+IPRLY LHILL PGIILALIG HLALVW+QKHTQFPGPGR Sbjct 182 VVGTWIHWALFGGDFPGDIIIPRLYVLHILLFPGIILALIGAHLALVWYQKHTQFPGPGR 241 Query 249 TEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDF 308 TE NVVGVR+MPVFA K+GA FA + GVL +M G+ QINP+WN+GPY P+QVSAGSQPD Sbjct 242 TEKNVVGVRIMPVFAAKAGAMFAFVTGVLAIMAGIFQINPVWNIGPYNPAQVSAGSQPDI 301 Query 309 YMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNL 368 YM WT+GL R++P WE Y ++T+ WV +IM ++F L+ AYP++EKR TGD AHHNL Sbjct 302 YMQWTDGLIRLFPAWELYLGNYTVVMSNWVVLIMTIMFGLMFAYPWIEKRLTGDDAHHNL 361 Query 369 LQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVY 428 LQRPRD PVRTAIGAMA +FY++LTLA MNDIIA KFHISLNATTWIGRIG++ILPP VY Sbjct 362 LQRPRDTPVRTAIGAMAFSFYILLTLACMNDIIAFKFHISLNATTWIGRIGLIILPPLVY 421 Query 429 FITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAP 488 FI YRW I LQRSDR VL HG+ETGIIKRLP G YIELHQPLGPVD HGHPIPL Y+GA Sbjct 422 FIAYRWAISLQRSDREVLAHGIETGIIKRLPQGEYIELHQPLGPVDSHGHPIPLPYEGAA 481 Query 489 LPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQ 538 LPKRMNKLGSAG+PG+GS L AD E E H E ALR+ Q Sbjct 482 LPKRMNKLGSAGAPGTGSILTADPPEEQLRHVEVEHELEAAERKALRDLQ 531 >gi|226307085|ref|YP_002767045.1| menaquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus erythropolis PR4] gi|226186202|dbj|BAH34306.1| menaquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus erythropolis PR4] Length=555 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/544 (73%), Positives = 455/544 (84%), Gaps = 1/544 (0%) Query 6 SPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYL 65 P I A QAE +D+RYH +A +RRQ+NKVFPTHWSF+LGEIALYSFV+LLI+GV+L Sbjct 7 KPSKISAAAAGQAEAMDSRYHLAAGMRRQINKVFPTHWSFMLGEIALYSFVILLISGVFL 66 Query 66 TLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAI 125 TLFFDPSM V Y G YQPLRGV MSRAY++ L+ISFEVRGGLFVRQIHHWAALMFAA+I Sbjct 67 TLFFDPSMAHVVYQGAYQPLRGVTMSRAYETTLNISFEVRGGLFVRQIHHWAALMFAASI 126 Query 126 MVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITL 185 +VHLARIFFTGAFRRPRE NWVIG LLLILAMFEG+FGY++PDDLLSG GLRAA IT+ Sbjct 127 IVHLARIFFTGAFRRPREANWVIGCLLLILAMFEGFFGYTIPDDLLSGTGLRAAFGGITM 186 Query 186 GMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPG 245 +P++GTW+HW +F GDFPG ++IPRLY H+LL PGIILALI HLALVW+QKHTQFPG Sbjct 187 SIPIVGTWMHWLIFDGDFPGDLIIPRLYVAHVLLFPGIILALIAGHLALVWYQKHTQFPG 246 Query 246 PGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQ 305 PGRTE NVVGVR++PVFA K GAFFA GVL L+GGL QINP+WN+GPY PSQVSAGSQ Sbjct 247 PGRTEQNVVGVRILPVFAMKGGAFFAMTFGVLALLGGLFQINPVWNIGPYNPSQVSAGSQ 306 Query 306 PDFYMMWTEGLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA 364 PD YMMWT+GLAR+WP WE Y F +TIPA VA+IMGLVF LL AYP++EKR TGD A Sbjct 307 PDIYMMWTDGLARLWPAWEIYLFGRYTIPAVFAVALIMGLVFALLIAYPWIEKRLTGDDA 366 Query 365 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP 424 HHN+LQRPRDVPVRTAIGAM+IAFY+VLT++ +NDIIA HISLNA TWIGRIGMVILP Sbjct 367 HHNILQRPRDVPVRTAIGAMSIAFYLVLTISCINDIIAYHLHISLNAMTWIGRIGMVILP 426 Query 425 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY 484 P YF+TYR+CIGLQRSDR+VLEHG+ETGIIKR+P+G YIE+HQPLGPVDEHGHPIPL+Y Sbjct 427 PIAYFVTYRFCIGLQRSDRAVLEHGIETGIIKRMPNGQYIEIHQPLGPVDEHGHPIPLEY 486 Query 485 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGS 544 QGA +PK+MNKLG AG PGSGS + AD E AL A H AE L L ++Q+ G Sbjct 487 QGAAVPKKMNKLGLAGKPGSGSLITADPVEESEALEAAHHEAEHEQLQILLDYQNRTNGK 546 Query 545 PDGE 548 DG Sbjct 547 SDGS 550 >gi|229490465|ref|ZP_04384306.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus erythropolis SK121] gi|229322755|gb|EEN88535.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Rhodococcus erythropolis SK121] Length=555 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/544 (73%), Positives = 455/544 (84%), Gaps = 1/544 (0%) Query 6 SPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYL 65 P I A QAE +D+RYH +A +RRQ+NKVFPTHWSF+LGEIALYSFV+LLI+GV+L Sbjct 7 KPSKISAAAAGQAEAMDSRYHLAAGMRRQINKVFPTHWSFMLGEIALYSFVILLISGVFL 66 Query 66 TLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAI 125 TLFFDPSM V Y G YQPLRGV MSRAY++ L+ISFEVRGGLFVRQIHHWAALMFAA+I Sbjct 67 TLFFDPSMAHVVYQGAYQPLRGVTMSRAYETTLNISFEVRGGLFVRQIHHWAALMFAASI 126 Query 126 MVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITL 185 +VHLARIFFTGAFRRPRE NWVIG LLLILAMFEG+FGY++PDDLLSG GLRAA IT+ Sbjct 127 IVHLARIFFTGAFRRPREANWVIGCLLLILAMFEGFFGYTIPDDLLSGTGLRAAFGGITM 186 Query 186 GMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPG 245 +P++GTW+HW +F GDFPG ++IPRLY H+LL PGIILALI HLALVW+QKHTQFPG Sbjct 187 SIPIVGTWMHWLIFDGDFPGDLIIPRLYVAHVLLFPGIILALIAGHLALVWYQKHTQFPG 246 Query 246 PGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQ 305 PGRTE NVVGVR++PVFA K GAFFA GVL L+GGL QINP+WN+GPY PSQVSAGSQ Sbjct 247 PGRTEQNVVGVRILPVFAMKGGAFFAMTFGVLALLGGLFQINPVWNIGPYNPSQVSAGSQ 306 Query 306 PDFYMMWTEGLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYA 364 PD YMMWT+GLAR+WP WE Y F +TIPA VA+IMGLVF LL AYP++EKR TGD A Sbjct 307 PDIYMMWTDGLARLWPAWEIYLFNRYTIPAVFAVALIMGLVFALLIAYPWIEKRLTGDDA 366 Query 365 HHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILP 424 HHN+LQRPRDVPVRTAIGAM+IAFY+VLT++ +NDIIA HISLNA TWIGRIGMVILP Sbjct 367 HHNILQRPRDVPVRTAIGAMSIAFYLVLTISCINDIIAYHLHISLNAMTWIGRIGMVILP 426 Query 425 PFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQY 484 P YF+TYR+CIGLQRSDR+VLEHG+ETGIIKR+P+G YIE+HQPLGPVDEHGHPIPL+Y Sbjct 427 PIAYFVTYRFCIGLQRSDRAVLEHGIETGIIKRMPNGQYIEIHQPLGPVDEHGHPIPLEY 486 Query 485 QGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGS 544 QGA +PK+MNKLG AG PGSGS + AD E AL A H AE L L ++Q+ G Sbjct 487 QGAAVPKKMNKLGLAGKPGSGSLITADPVEESEALEAAHHEAEHEQLQILLDYQNRTNGK 546 Query 545 PDGE 548 DG Sbjct 547 SDGS 550 >gi|296164248|ref|ZP_06846839.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900404|gb|EFG79819.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length=500 Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/470 (80%), Positives = 424/470 (91%), Gaps = 0/470 (0%) Query 8 PNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTL 67 P + +++A Q + ID+RYHPSAA+RRQLNKVFPTHWSFLLGE+ALYSF+VL+ITGVYL L Sbjct 16 PTLNDLVADQGDAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEVALYSFIVLVITGVYLAL 75 Query 68 FFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMV 127 FFDPSM +VTY+G+YQPLRGV MS+AYQS L+ISFEVRGGLFVRQ+HHWAALMFAAAIMV Sbjct 76 FFDPSMTEVTYDGIYQPLRGVAMSKAYQSTLEISFEVRGGLFVRQVHHWAALMFAAAIMV 135 Query 128 HLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGM 187 HLAR+FFTGAFRRPRE NWVIG+LLLILAMFEGYFGYSLPDDLLSG GLR ALSSIT+ + Sbjct 136 HLARVFFTGAFRRPREANWVIGALLLILAMFEGYFGYSLPDDLLSGTGLRIALSSITMSV 195 Query 188 PVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPG 247 PVIGTWLHWALFGGDFPG I++ R+YA+HIL+ P I ALIG+HLALVWFQKHTQFPGPG Sbjct 196 PVIGTWLHWALFGGDFPGDIIVSRMYAIHILIFPAIFAALIGVHLALVWFQKHTQFPGPG 255 Query 248 RTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPD 307 RTE+NVVGVRVMPVFA KSGAFFA V +LGLMGGLLQINPIWNLGPY PSQVSAGSQPD Sbjct 256 RTENNVVGVRVMPVFAVKSGAFFAMTVAILGLMGGLLQINPIWNLGPYTPSQVSAGSQPD 315 Query 308 FYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHN 367 FY+MWTEGLAR+WP WE Y W HT+PA WVA++MG++F LL YP +EK+ TGD AHHN Sbjct 316 FYLMWTEGLARLWPAWELYVWGHTVPAAFWVALLMGMLFALLTTYPLIEKKITGDNAHHN 375 Query 368 LLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFV 427 LLQRPRD PVRTAIG MAI+FY+VLT + MNDI+A KF ISLNATTWIGRIGMV+LPP + Sbjct 376 LLQRPRDAPVRTAIGTMAISFYLVLTFSGMNDILAYKFDISLNATTWIGRIGMVVLPPII 435 Query 428 YFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHG 477 Y+ITYRWCIGLQR DR+VL+HG+ETGIIKRLPHGAYIE+HQ LG VDEHG Sbjct 436 YYITYRWCIGLQRGDRAVLQHGIETGIIKRLPHGAYIEIHQTLGDVDEHG 485 >gi|326382513|ref|ZP_08204204.1| cytochrome b/b6 domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326198632|gb|EGD55815.1| cytochrome b/b6 domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=539 Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/531 (71%), Positives = 448/531 (85%), Gaps = 3/531 (0%) Query 9 NIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLF 68 I + LA QAE +D+RYH ++ +RRQ+NKVFPTHWSFLLGEIALYSF++LL++G YLTLF Sbjct 2 TIADRLATQAEGVDSRYHLASGMRRQINKVFPTHWSFLLGEIALYSFIILLLSGTYLTLF 61 Query 69 FDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVH 128 FDPSM V Y+G YQPL GV MS+AY++ L+ISFEVRGGLFVRQIHHWAAL+FAA+I++H Sbjct 62 FDPSMAHVIYDGAYQPLNGVTMSKAYETTLNISFEVRGGLFVRQIHHWAALLFAASIIIH 121 Query 129 LARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMP 188 + RIFFTGAFRRPRE NWVIG LL+LAMFEG+FGYSLPDDLLSG G+RAA+S I LG+P Sbjct 122 MMRIFFTGAFRRPREANWVIGCFLLLLAMFEGFFGYSLPDDLLSGTGVRAAMSGIVLGIP 181 Query 189 VIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGR 248 +IGTW+ WALF GDFPG I+IPRLY LHIL+ P IIL LIG HLALVW+QKHTQFPGPGR Sbjct 182 LIGTWVQWALFSGDFPGDIIIPRLYVLHILIFPAIILGLIGAHLALVWYQKHTQFPGPGR 241 Query 249 TEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDF 308 TE NVVGVR++PVFA K GAFFA I G L L G+ QIN +WN+GPY P+QVSAGSQPD Sbjct 242 TEKNVVGVRILPVFAAKGGAFFAIITGFLALFAGIFQINAVWNIGPYNPAQVSAGSQPDI 301 Query 309 YMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNL 368 YMMWT+G AR+ PPWE Y ++TIPA WV V++G++F LL YP++EK+ TGD AHHNL Sbjct 302 YMMWTDGFARLMPPWELYLGNYTIPAIFWVVVLIGVIFGLLFTYPWIEKKLTGDTAHHNL 361 Query 369 LQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVY 428 LQRPRD PVRTA+GAMA+AFY++LT++ MNDIIALKFHISLNATTW+GRIG++++PP VY Sbjct 362 LQRPRDTPVRTAVGAMALAFYIILTVSCMNDIIALKFHISLNATTWMGRIGLLVIPPLVY 421 Query 429 FITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAP 488 FI YRW + LQRSDR VL HG+ETGII+R P G YIE+HQPLGPVD+HGHPIPL YQGAP Sbjct 422 FIAYRWALSLQRSDREVLAHGIETGIIRREPKGEYIEIHQPLGPVDDHGHPIPLPYQGAP 481 Query 489 LPKRMNKLGSAGSPGSGSFLFADSAAEDA---ALREAGHAAEQRALAALRE 536 LPKRMNKLGSAGSPG+G+ L D+A E A + H AE++A+ AL+E Sbjct 482 LPKRMNKLGSAGSPGTGTVLVPDTAEEQALNERIAHEQHEAEKKAIIALQE 532 >gi|296140391|ref|YP_003647634.1| cytochrome b/b6 domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296028525|gb|ADG79295.1| Cytochrome b/b6 domain protein [Tsukamurella paurometabola DSM 20162] Length=541 Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/532 (70%), Positives = 456/532 (86%), Gaps = 0/532 (0%) Query 9 NIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLF 68 IG+ +A+QAE++D+RYH +A +RRQ+NKVFPTHWSF+LGEIALYSFV+LL++GVYLTLF Sbjct 3 TIGDRVAQQAEEVDSRYHLAAGIRRQINKVFPTHWSFMLGEIALYSFVILLLSGVYLTLF 62 Query 69 FDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVH 128 FDPS+ +V Y+G Y+PL GV MSRA+ + LDISFEVRGGLFVRQ+HHWAALMFAA+I++H Sbjct 63 FDPSLAEVHYSGAYEPLNGVTMSRAFATTLDISFEVRGGLFVRQVHHWAALMFAASIIIH 122 Query 129 LARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMP 188 +ARIFFTGAFRRPRE NW+IG LL LAMFEG+FGYS+PDDLLSG G+RAA+S I +G+P Sbjct 123 MARIFFTGAFRRPREANWLIGCALLALAMFEGFFGYSIPDDLLSGTGVRAAMSGIVIGLP 182 Query 189 VIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGR 248 +IGTW+HW +FGGDFPG I I RLY H+LL PGIILALI HLALVW+QKHTQF GPGR Sbjct 183 IIGTWMHWLIFGGDFPGDIFISRLYVAHVLLFPGIILALIAGHLALVWYQKHTQFAGPGR 242 Query 249 TEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDF 308 TE NVVGVR++PVFA K+GA+FAA G++ +M G+ INP+WNLGPY P++VSAG QPD Sbjct 243 TEENVVGVRILPVFAVKTGAYFAATFGIIAVMAGIFTINPVWNLGPYDPAKVSAGVQPDI 302 Query 309 YMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNL 368 Y+MWT+GLAR+WP WE YFW HT+P +VA+I+G++F L+ AYP++EK+ TGD AHHN+ Sbjct 303 YLMWTDGLARLWPAWELYFWGHTVPGAAFVAIIVGIIFGLMFAYPWIEKKLTGDDAHHNI 362 Query 369 LQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVY 428 LQRPRDVPVRTAIGAMA+AFY+VLTL+ +ND+IALKFHISLNA TWIGRIG+VILPP Y Sbjct 363 LQRPRDVPVRTAIGAMALAFYIVLTLSCVNDVIALKFHISLNAMTWIGRIGLVILPPIAY 422 Query 429 FITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAP 488 ++TYR+CIGLQR+DR+VL+HG+ETGII R P+G +IELHQPLGPVD+HGH +PL Y+GA Sbjct 423 WLTYRFCIGLQRADRAVLKHGIETGIIVRRPNGEFIELHQPLGPVDDHGHAVPLPYEGAV 482 Query 489 LPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 +P + N+LG+AG PG+GSFL AD A E A E H E +AL AL++ QD+ Sbjct 483 VPTKANQLGAAGQPGTGSFLRADPADEQRANAERDHENEVKALEALKKVQDN 534 >gi|262202950|ref|YP_003274158.1| cytochrome b/b6 domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086297|gb|ACY22265.1| Cytochrome b/b6 domain protein [Gordonia bronchialis DSM 43247] Length=539 Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/530 (70%), Positives = 444/530 (84%), Gaps = 0/530 (0%) Query 9 NIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLF 68 I + L QA+++D+RYH +A +RRQ+NKVFP+HWSF+LGE+ALYSF++LLI+GVYLTLF Sbjct 2 TIADRLGTQAQEVDSRYHLAAGMRRQINKVFPSHWSFMLGEVALYSFIILLISGVYLTLF 61 Query 69 FDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVH 128 FDPSM +V Y+G YQPL GV M++AY++ L+ISFEVRGGLFVRQIHHWAAL+FAA+I++H Sbjct 62 FDPSMSEVIYDGAYQPLNGVMMTKAYETTLNISFEVRGGLFVRQIHHWAALLFAASIIIH 121 Query 129 LARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMP 188 + RIFFTGAFRRPRE NW+IG LLILAMFEG+FGYSLPDDLLSG G+RAA+S I LG+P Sbjct 122 MMRIFFTGAFRRPREANWIIGCFLLILAMFEGFFGYSLPDDLLSGTGVRAAMSGIVLGIP 181 Query 189 VIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGR 248 ++GTW+HWALFGGDFPG I+IPR+Y LHILL PGIILALIG HLALVW+QKHTQFPGPGR Sbjct 182 LVGTWIHWALFGGDFPGEIIIPRMYVLHILLFPGIILALIGAHLALVWYQKHTQFPGPGR 241 Query 249 TEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDF 308 TE NVVGVR+MPVFA K GA FA GVL LM G+ QINP+W LGPY P+ VSAGSQPD Sbjct 242 TERNVVGVRIMPVFAAKGGAMFAMTTGVLALMAGVFQINPVWVLGPYNPAHVSAGSQPDI 301 Query 309 YMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNL 368 YMMWT+GLAR+ P WE Y +TIPA WV V++ ++F + AYP++EKR TGD AHHNL Sbjct 302 YMMWTDGLARLMPAWELYLGRYTIPAIFWVVVVITIMFAGMFAYPWIEKRLTGDDAHHNL 361 Query 369 LQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVY 428 LQRPRDVPVRT IGAMA++FY++LTL+ MND+IA KFH+SLNATTW+GRIG++++PP Y Sbjct 362 LQRPRDVPVRTGIGAMALSFYIILTLSCMNDVIAYKFHVSLNATTWMGRIGLIVVPPLAY 421 Query 429 FITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAP 488 F+ YRW + LQRSDR VL HG+ETG+IKRLP G YIE+HQPLGPVD HGHPIPL Y+GA Sbjct 422 FVAYRWALALQRSDRQVLAHGIETGLIKRLPQGEYIEVHQPLGPVDSHGHPIPLPYEGAA 481 Query 489 LPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQ 538 LPKRMNKLGS+G+PG+GS L AD + EA H E L ALRE Q Sbjct 482 LPKRMNKLGSSGAPGTGSILTADPPEQQRRNVEADHENEMAELKALRELQ 531 >gi|289443703|ref|ZP_06433447.1| LOW QUALITY PROTEIN: ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis T46] gi|289416622|gb|EFD13862.1| LOW QUALITY PROTEIN: ubiquinol-cytochrome C reductase qcrB cytochrome B subunit [Mycobacterium tuberculosis T46] Length=537 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%) Query 159 EGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHIL 218 EGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHIL Sbjct 147 EGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHIL 206 Query 219 LLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLG 278 LLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLG Sbjct 207 LLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLG 266 Query 279 LMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWV 338 LMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWV Sbjct 267 LMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWV 326 Query 339 AVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMN 398 AVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMN Sbjct 327 AVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMN 386 Query 399 DIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRL 458 DIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRL Sbjct 387 DIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRL 446 Query 459 PHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAA 518 PHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAA Sbjct 447 PHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAA 506 Query 519 LREAGHAAEQRALAALREHQDSIMGSPDGEH 549 LREAGHAAEQRALAALREHQDSIMGSPDGEH Sbjct 507 LREAGHAAEQRALAALREHQDSIMGSPDGEH 537 >gi|29365475|dbj|BAC66448.1| cytochrome b of cytochrome c reductase complex [Rhodococcus rhodochrous] Length=549 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/536 (74%), Positives = 454/536 (85%), Gaps = 2/536 (0%) Query 15 ARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMV 74 A AE+ID+RYHP+A LRRQ+NKVFPTHWSFLLGEIALYSFV+LLI+GVYLTLFFDPS+ Sbjct 10 AHAAENIDSRYHPAAGLRRQINKVFPTHWSFLLGEIALYSFVILLISGVYLTLFFDPSLA 69 Query 75 DVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFF 134 V Y+G Y LRGV MSRAY++ LDISFEVRGGLFVRQIHHW+ALMFAA+I+VHL R+FF Sbjct 70 HVVYDGAYTTLRGVTMSRAYETTLDISFEVRGGLFVRQIHHWSALMFAASIIVHLLRVFF 129 Query 135 TGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWL 194 TGAFRRPRE NWVIGSLLLILAMFEG+FGYSLPDDLLSG GLRAALS IT+ +PVIGTW+ Sbjct 130 TGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALSGITISIPVIGTWM 189 Query 195 HWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVV 254 HW +FGGDFPG ++IPRLY H+LLLPGIILALI HLALVW+QKHTQFPGPGRTE NVV Sbjct 190 HWLIFGGDFPGMLIIPRLYVAHVLLLPGIILALIAAHLALVWYQKHTQFPGPGRTEQNVV 249 Query 255 GVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTE 314 GVR++PVFA KSGAFFA VL LM GLLQINP+WN+GPY PSQVSAGSQPD YMMWT+ Sbjct 250 GVRILPVFAVKSGAFFAITFAVLALMSGLLQINPVWNIGPYNPSQVSAGSQPDIYMMWTD 309 Query 315 GLARIWPPWEFY-FWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 GLARIWP WE Y F +TIPA W+AVIMGLVF +L AYP++EK+FT D AHHNLLQRPR Sbjct 310 GLARIWPAWEIYLFGRYTIPAVFWIAVIMGLVFAVLIAYPWIEKKFTKDDAHHNLLQRPR 369 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 D PVRTAIGA A+ FY + T+ +NDIIA K ISLNA TWIGRIG+++ PP Y++TYR Sbjct 370 DSPVRTAIGATALTFYAIATIMCINDIIAYKLDISLNAMTWIGRIGILLGPPLAYYLTYR 429 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 +C+GLQRSDR VLEHG+ETGI++RLPHG YIE+HQ LGPVDEHGHPIPL+YQGAP+PKRM Sbjct 430 FCLGLQRSDRQVLEHGIETGIVRRLPHGEYIEIHQSLGPVDEHGHPIPLEYQGAPVPKRM 489 Query 494 NKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGSP-DGE 548 NKLG+ SP +GS+ AD A E AL A H AE A L ++Q+ + G+P DG+ Sbjct 490 NKLGTPASPVAGSWWSADPAEEATALEAAHHEAEVEQRAILTQYQERVHGTPTDGD 545 >gi|169629553|ref|YP_001703202.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium abscessus ATCC 19977] gi|169241520|emb|CAM62548.1| Ubiquinol-cytochrome c reductase cytochrome b subunit [Mycobacterium abscessus] Length=525 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/521 (73%), Positives = 439/521 (85%), Gaps = 1/521 (0%) Query 16 RQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMVD 75 + A +D+RY SA LRRQLNKVFPTHWSFLLGEIA+YSFVVLL++G+YL LFFDPSM + Sbjct 6 KLAGAVDSRYRASAGLRRQLNKVFPTHWSFLLGEIAVYSFVVLLLSGIYLALFFDPSMSE 65 Query 76 VTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFFT 135 + YNGVYQPLRG EMS AY SALD+SFEVRGGLFVRQIHHWAALMFAA+I+VHLAR+FFT Sbjct 66 IAYNGVYQPLRGTEMSTAYASALDLSFEVRGGLFVRQIHHWAALMFAASIVVHLARVFFT 125 Query 136 GAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLH 195 GAFRRPRE NWVIGS+LLILAM EG+ GYSLPDDLLSG GLR + + +P++GTW+H Sbjct 126 GAFRRPREANWVIGSVLLILAMAEGFTGYSLPDDLLSGTGLRVVTQGM-MSLPIVGTWMH 184 Query 196 WALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVG 255 W LFGGDFPG ++PRLY LH+LL+P I++ALI HL LVW+QKHTQFPGP RTE NVVG Sbjct 185 WGLFGGDFPGHSVLPRLYVLHVLLVPAIMIALISAHLVLVWYQKHTQFPGPRRTESNVVG 244 Query 256 VRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEG 315 VR++PVFA KSGA FA +V +L LMGGLLQINP+WNLGPYKPSQV+AGS PD Y+MWT+G Sbjct 245 VRIVPVFALKSGALFAVVVAILALMGGLLQINPVWNLGPYKPSQVAAGSPPDIYLMWTDG 304 Query 316 LARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDV 375 L R+ P WE Y + HT+PA +W + + F+++ A+P+LE+ FTGD A HNLLQRPRD Sbjct 305 LLRLVPNWELYVFGHTVPAVLWGVLGILAAFMVIVAWPWLEQHFTGDDAAHNLLQRPRDA 364 Query 376 PVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWC 435 PVRTAIGA A + Y +LTL+ MNDIIALKFHISLNATTWIGRIGMVILP VY+I YRW Sbjct 365 PVRTAIGAAAFSLYFLLTLSCMNDIIALKFHISLNATTWIGRIGMVILPAVVYYIAYRWA 424 Query 436 IGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNK 495 IGLQRSDR+VLEHG+ETGIIKRLPHG YIE+HQPL VDEHGH IPL+YQGAP+P+RMNK Sbjct 425 IGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQRMNK 484 Query 496 LGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALRE 536 LGSAG+PG+GSFLFAD A E AL EA H A LAALR+ Sbjct 485 LGSAGAPGTGSFLFADPADEQHALAEAEHEAMCAQLAALRQ 525 >gi|317506581|ref|ZP_07964373.1| cytochrome [Segniliparus rugosus ATCC BAA-974] gi|316255090|gb|EFV14368.1| cytochrome [Segniliparus rugosus ATCC BAA-974] Length=561 Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/523 (69%), Positives = 432/523 (83%), Gaps = 0/523 (0%) Query 16 RQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMVD 75 +Q E+ D RYH SA +RRQ+NKVFPTHWSF+LGEIALYSFV+LL++GVYLTLFF PSM + Sbjct 17 KQLEEADKRYHLSAGMRRQINKVFPTHWSFMLGEIALYSFVILLLSGVYLTLFFKPSMAE 76 Query 76 VTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFFT 135 Y+GVYQPL GV M+ A+ S LD+SFEVRGGLF+RQIHHWAAL+F A++ VH+ RIFFT Sbjct 77 TVYHGVYQPLSGVRMTEAFASTLDLSFEVRGGLFMRQIHHWAALLFLASMAVHMMRIFFT 136 Query 136 GAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLH 195 GAFRRPRE NW+IG L ++MFEGYFGY LPDDLLSG G+RAA+S I LG+P+IGTW+H Sbjct 137 GAFRRPREANWLIGCGLFFISMFEGYFGYGLPDDLLSGTGIRAAMSGIVLGLPLIGTWVH 196 Query 196 WALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVG 255 W L+GGDFPG I+IPRLY LH+L+ PGII+ALIG+HLALVW+QKHTQFPGPGRTE+NVVG Sbjct 197 WGLYGGDFPGEIIIPRLYILHVLIFPGIIMALIGVHLALVWYQKHTQFPGPGRTENNVVG 256 Query 256 VRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEG 315 VR+MPVFA K+GAFFA + GVL +M G+ INP+W LGPY P+QVSAGSQPD+Y+ WT+G Sbjct 257 VRIMPVFALKAGAFFALVFGVLAIMSGIFTINPVWTLGPYNPAQVSAGSQPDWYLGWTDG 316 Query 316 LARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDV 375 L RIWP WE Y HTIP + A+ +G+ LL +PFLE++ TGD AHHN+LQRPRD Sbjct 317 LLRIWPAWELYVGGHTIPQAGFAAMFLGVYITLLFVWPFLEQKLTGDKAHHNILQRPRDT 376 Query 376 PVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWC 435 PVRT +GAM +++LT A NDIIALKF ISLNATTW RI +V+ P Y+ TYR+C Sbjct 377 PVRTGVGAMMFTVFVLLTAACGNDIIALKFDISLNATTWFFRIALVVGPIIAYYSTYRFC 436 Query 436 IGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNK 495 +GLQRSDR+VLEHG+ETGI++RLPHG YIE+HQPLGPVD+HGHPIPL+YQGA +PK+MN+ Sbjct 437 LGLQRSDRAVLEHGIETGILRRLPHGEYIEVHQPLGPVDDHGHPIPLEYQGAAVPKKMNQ 496 Query 496 LGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQ 538 LGSAG+PG GSF AD A E+ AL A HA+E AL A+RE Q Sbjct 497 LGSAGAPGKGSFFTADPAEENEALLAAEHASEHHALEAVRELQ 539 >gi|333918949|ref|YP_004492530.1| Ubiquinol-cytochrome c reductase cytochrome b subunit [Amycolicicoccus subflavus DQS3-9A1] gi|333481170|gb|AEF39730.1| Ubiquinol-cytochrome c reductase cytochrome b subunit [Amycolicicoccus subflavus DQS3-9A1] Length=549 Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/549 (71%), Positives = 448/549 (82%), Gaps = 2/549 (0%) Query 1 MSPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLI 60 MS L + E R A D+D RY +A +RRQ+NKVFPTHWSFLLGE+ALYSF++LLI Sbjct 3 MSQALKARSTAEA-NRAAGDMDDRYRMAAGMRRQMNKVFPTHWSFLLGEVALYSFIILLI 61 Query 61 TGVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALM 120 +GVYLTLFFDPSM + Y GVYQP+RGVEMS+AY++ L++SFEVRGGLFVRQ+HHWAAL+ Sbjct 62 SGVYLTLFFDPSMAHIAYEGVYQPMRGVEMSKAYETTLNLSFEVRGGLFVRQLHHWAALL 121 Query 121 FAAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAAL 180 FAA+I++HL RIFFTG FR+PRE NWVIGSL+L+L + EG+ GY+LPDDLLSG GLR Sbjct 122 FAASIIMHLLRIFFTGGFRKPREANWVIGSLILVLTIAEGFLGYTLPDDLLSGTGLRIT- 180 Query 181 SSITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKH 240 S+I L +PV+GTW+HW FGGDFPG ++IPR Y LHILLLPGI+LALI HLALVW+QKH Sbjct 181 SAIMLSLPVVGTWIHWLAFGGDFPGELIIPRAYVLHILLLPGILLALIAAHLALVWYQKH 240 Query 241 TQFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQV 300 TQFPGPGRTE+NVVGVRV+PVF K+G FFA I G+L LMGGLLQINPIWNLGPY PSQ+ Sbjct 241 TQFPGPGRTENNVVGVRVLPVFGVKAGGFFAVIFGILALMGGLLQINPIWNLGPYNPSQI 300 Query 301 SAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFT 360 SAGSQPDFYM +TEG+ARI+P W+ Y ++ IP+ VWVAVI+G+VF LL YPF+E + T Sbjct 301 SAGSQPDFYMFFTEGMARIFPGWDIYLGNYMIPSVVWVAVILGVVFALLFTYPFIEAKLT 360 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 D HHNLLQRPRDVPVRTA+GAMA+AFY+VL L AMNDIIA KFHISLNATTW GRIGM Sbjct 361 KDDVHHNLLQRPRDVPVRTALGAMALAFYLVLFLMAMNDIIAFKFHISLNATTWAGRIGM 420 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 V+LPP Y I YRWC+GLQRSDR VLEHG+ETGII RLPHG YIELHQPLGPVDEHGHPI Sbjct 421 VVLPPLAYIIAYRWCLGLQRSDRKVLEHGIETGIITRLPHGEYIELHQPLGPVDEHGHPI 480 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDS 540 PL YQGA +PKRMN+LGSAG PGSG L AD E AL A H A ALRE Q Sbjct 481 PLPYQGAAVPKRMNQLGSAGKPGSGGLLVADPQDEHEALERAEHQAHVEHARALRELQQR 540 Query 541 IMGSPDGEH 549 + +G+H Sbjct 541 NIDGGNGQH 549 >gi|296393478|ref|YP_003658362.1| cytochrome b/b6 domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180625|gb|ADG97531.1| Cytochrome b/b6 domain protein [Segniliparus rotundus DSM 44985] Length=564 Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/533 (67%), Positives = 434/533 (82%), Gaps = 0/533 (0%) Query 16 RQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMVD 75 +Q E+ D RYH SA +RRQ+NKVFPTHWSF+LGEIALYSFV+L+++GVYLTLFF PSM + Sbjct 17 KQLEEADKRYHLSAGMRRQINKVFPTHWSFMLGEIALYSFVILILSGVYLTLFFKPSMAE 76 Query 76 VTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFFT 135 Y+GVYQPL GV M+ A+ S LD+SFEVRGGLF+RQIHHWAAL+F A++ VH+ RIFFT Sbjct 77 TVYHGVYQPLSGVRMTEAFASTLDLSFEVRGGLFMRQIHHWAALLFLASMAVHMMRIFFT 136 Query 136 GAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLH 195 GAFRRPRE NW IG L ++MFEGYFGY LPDDLLSG G+RAA+S I LG+PVIGTW+H Sbjct 137 GAFRRPREANWFIGCALFFISMFEGYFGYGLPDDLLSGTGIRAAMSGIVLGLPVIGTWVH 196 Query 196 WALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVG 255 W L+GGDFPG I+IPRLY LH+L+ PGIILALIG+HLALVW+QKHTQFPGPGRTE+NVVG Sbjct 197 WGLYGGDFPGNIIIPRLYILHVLVFPGIILALIGVHLALVWYQKHTQFPGPGRTENNVVG 256 Query 256 VRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEG 315 VR++PVFA K+GAFFA + GVL +M G+ QINP+W LGPY P+QVSAGSQPD+Y+ WT+G Sbjct 257 VRILPVFALKAGAFFALVFGVLAIMSGIFQINPVWTLGPYNPAQVSAGSQPDWYLGWTDG 316 Query 316 LARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDV 375 + RI+P WE Y HTIP W A+ +G + +P +E++FTGD AHHN+LQRPRD Sbjct 317 MLRIFPAWETYIGGHTIPQAAWAAISLGAFVTPMVIWPIMERKFTGDDAHHNILQRPRDT 376 Query 376 PVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWC 435 PVRT +GAM +++LT A NDIIALKF ISLNATTW RI +V+ P Y+ TYR+C Sbjct 377 PVRTGVGAMMFTVFVILTAACGNDIIALKFDISLNATTWFFRIALVVGPIIAYYATYRFC 436 Query 436 IGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNK 495 +GLQRSDR+VLEHG+ETGI++RLPHG YIE+HQPLGPVD+HGHP+PL+YQGA +PK+MN+ Sbjct 437 LGLQRSDRAVLEHGIETGILRRLPHGEYIEVHQPLGPVDDHGHPLPLEYQGATVPKKMNQ 496 Query 496 LGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALREHQDSIMGSPDGE 548 LGS+G+PG GSFL D A+E+ AL A H +E RAL A+R+ Q+ +G Sbjct 497 LGSSGAPGKGSFLTPDPASENEALTAAEHESEHRALEAIRKIQEENANGHNGR 549 >gi|262203490|ref|YP_003274698.1| cytochrome b/b6 domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086837|gb|ACY22805.1| Cytochrome b/b6 domain protein [Gordonia bronchialis DSM 43247] Length=537 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/517 (69%), Positives = 427/517 (83%), Gaps = 1/517 (0%) Query 20 DIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSMVDVTYN 79 ++D+ YH + RRQ+NKVFP+HWSF+LGE+ALYSF++LLI+GVYLTLFFDPSM +V Y+ Sbjct 13 ELDSWYHLAPGTRRQINKVFPSHWSFMLGEVALYSFIILLISGVYLTLFFDPSMSEVIYD 72 Query 80 GVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIFFTGAFR 139 G YQPL GV M++AY++ L+ISFEVRGGLFVRQIHHWAAL+FAA+I++H+ RIFFTGAFR Sbjct 73 GAYQPLNGVMMTKAYETTLNISFEVRGGLFVRQIHHWAALLFAASIIIHMMRIFFTGAFR 132 Query 140 RPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTWLHWALF 199 RPRE NW+IG LLILAMFEG+FGYSLPDDLLSG G+RA L++ LG+P++GTW+ WALF Sbjct 133 RPREANWIIGCFLLILAMFEGFFGYSLPDDLLSGTGVRA-LTAGALGLPIVGTWIRWALF 191 Query 200 GGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNVVGVRVM 259 GGDFPG I+IPR+Y LHILL PGIILALIG HLALVW+QKHTQFPGPGRTE NVVGVR+M Sbjct 192 GGDFPGEIIIPRMYVLHILLFPGIILALIGAHLALVWYQKHTQFPGPGRTERNVVGVRIM 251 Query 260 PVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWTEGLARI 319 PVFA K GA FA GVL LM G+ QINP+W LGPY P+ VSAGSQPD YMMWT+GL R+ Sbjct 252 PVFAAKGGAMFAMTTGVLALMAGVFQINPVWVLGPYNPAHVSAGSQPDIYMMWTDGLLRL 311 Query 320 WPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPRDVPVRT 379 P WE Y +T+PA W +++G VF+ + YP++E+R T D AHHNLLQRPRDVPVRT Sbjct 312 MPAWELYLGKYTVPASNWGVLLIGAVFISMMVYPWVERRLTNDRAHHNLLQRPRDVPVRT 371 Query 380 AIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYRWCIGLQ 439 IGAMA++FY++LTL+ MND+IA KFH+SLNATTW+GRIG++++PP YF+ YRW + LQ Sbjct 372 GIGAMALSFYIILTLSCMNDVIAYKFHVSLNATTWMGRIGLIVVPPLAYFVAYRWALALQ 431 Query 440 RSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRMNKLGSA 499 RSDR+VL HG+ETG+IKRLP G YIE+HQPLGPVD HGHPIPL YQGA LPKRMNKLGS+ Sbjct 432 RSDRAVLAHGIETGLIKRLPQGEYIEVHQPLGPVDSHGHPIPLPYQGAALPKRMNKLGSS 491 Query 500 GSPGSGSFLFADSAAEDAALREAGHAAEQRALAALRE 536 G+PG+GS L AD + E + L A+R Sbjct 492 GAPGTGSILTADPPEQQQHNAERARSELDAELEAIRR 528 >gi|300784115|ref|YP_003764406.1| ubiquinol-cytochrome C reductase cytochrome b subunit [Amycolatopsis mediterranei U32] gi|299793629|gb|ADJ44004.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Amycolatopsis mediterranei U32] gi|340525529|gb|AEK40734.1| ubiquinol-cytochrome C reductase cytochrome b subunit [Amycolatopsis mediterranei S699] Length=560 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/543 (65%), Positives = 427/543 (79%), Gaps = 4/543 (0%) Query 2 SPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLIT 61 +P + + L A + D RYH + LR QLNKVFPTHWSFLLGEIALYSF++LL+T Sbjct 6 TPTKGSSPVEKALGDAANNADQRYHLAKGLRHQLNKVFPTHWSFLLGEIALYSFIILLLT 65 Query 62 GVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMF 121 GVYLTLFFDPSM +V Y+G ++ ++G+EMS+A+++ LDISF+VRGGLF+RQ+HHWAAL+F Sbjct 66 GVYLTLFFDPSMQEVVYHGSFKNMQGLEMSQAFRTTLDISFDVRGGLFMRQLHHWAALIF 125 Query 122 AAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALS 181 A++ VH+ RIFFTGAFRRPRE NWVIG LLL+L FEG+FGYSLPDDLLSG G+RA LS Sbjct 126 VASMAVHMLRIFFTGAFRRPREANWVIGGLLLVLGCFEGFFGYSLPDDLLSGTGIRATLS 185 Query 182 SITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHT 241 I L +PV GTW+HWALFGG+FPG +IPRLY LHILLLPGI+LAL+G+HLALVW+QKHT Sbjct 186 GIVLSVPVAGTWIHWALFGGEFPGDQIIPRLYTLHILLLPGIMLALVGVHLALVWYQKHT 245 Query 242 QFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVS 301 QFPG R E NVVGVR+MP FA K GAFF ++GVL LM GL QINP+WN GPY P+QVS Sbjct 246 QFPGVRRKETNVVGVRIMPYFALKGGAFFTLVIGVLALMSGLFQINPVWNFGPYNPAQVS 305 Query 302 AGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWV-AVIMGLVFVLLPAYPFLEKRFT 360 AGSQPD+YM W +G+ RIWP WE Y ++TIPA + AV M ++ LL AYPFLE++ + Sbjct 306 AGSQPDWYMAWADGMLRIWPAWEVYLGNYTIPAVFFPGAVGMPILIGLLLAYPFLERKLS 365 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 D AHHNLLQRPRD PVRTA+GAMA+ F++V+ L+ NDIIA +F ISLNATTW GRIG+ Sbjct 366 KDTAHHNLLQRPRDAPVRTALGAMALGFFLVIELSGFNDIIADQFDISLNATTWAGRIGV 425 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 +++PP Y++TYR C+GLQR+DR VLEHGVETGIIKRLPHG +IE+HQPL VD HGH I Sbjct 426 LLVPPVAYYLTYRLCLGLQRADREVLEHGVETGIIKRLPHGEFIEIHQPLAGVDSHGHAI 485 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREA---GHAAEQRALAALREH 537 PL+YQGA +PK+MNKLGSAG G+F D A E AAL+ A GH+ + Sbjct 486 PLEYQGASVPKKMNKLGSAGHAVPGTFWSPDPAEETAALQRANGNGHSGAENGQHGQHGE 545 Query 538 QDS 540 DS Sbjct 546 FDS 548 >gi|302525356|ref|ZP_07277698.1| cytochrome b [Streptomyces sp. AA4] gi|302434251|gb|EFL06067.1| cytochrome b [Streptomyces sp. AA4] Length=553 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/544 (65%), Positives = 420/544 (78%), Gaps = 4/544 (0%) Query 2 SPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLIT 61 +P + + L A++ D RY + LR Q+NKVFPTHWSFLLGEIALYSF+V+L++ Sbjct 6 TPTKGTSALQKHLGEAADNADQRYKLAKGLRHQMNKVFPTHWSFLLGEIALYSFIVILLS 65 Query 62 GVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMF 121 GVYLTLFFDPSM +VTY+G + ++G++MS+A+++ LDISF+VRGGLFVRQ+HHWAAL+F Sbjct 66 GVYLTLFFDPSMQEVTYHGSFTNMQGMQMSQAFKTTLDISFDVRGGLFVRQLHHWAALIF 125 Query 122 AAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALS 181 A++MVH+ RIFFTGAFR+PRE NWVIG LLLIL MFEG+FGYSLPDDLLSG G+RA LS Sbjct 126 VASMMVHMLRIFFTGAFRKPREANWVIGGLLLILGMFEGFFGYSLPDDLLSGTGIRATLS 185 Query 182 SITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHT 241 I L +PVIGTW+HWALFGG+FPG +IPRLY LHILL+PGI+LALIG HLALVW+QKHT Sbjct 186 GIVLSVPVIGTWIHWALFGGEFPGDQIIPRLYTLHILLVPGIMLALIGAHLALVWYQKHT 245 Query 242 QFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVS 301 QFPG R E NVVGVR+MP FA K GAFF +VGVL LM GL QINP+WN GPY PS VS Sbjct 246 QFPGVRRKETNVVGVRIMPYFALKGGAFFTLVVGVLALMSGLFQINPVWNFGPYNPSMVS 305 Query 302 AGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWVAVI-MGLVFVLLPAYPFLEKRFT 360 AGSQPDFYM W +G+ RIWP WE Y ++TIPA + I M ++F LL YPFLE++ + Sbjct 306 AGSQPDFYMAWADGMLRIWPAWEVYLGNYTIPAVFFPGAIGMPILFALLLTYPFLERKLS 365 Query 361 GDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGM 420 D AHHNLLQRPRD PVRTA+G MA+ F+ V+ L+ NDIIA +F ISLNATTW GRIG+ Sbjct 366 KDTAHHNLLQRPRDAPVRTALGMMALGFFAVIELSGFNDIIADQFDISLNATTWAGRIGV 425 Query 421 VILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPI 480 +I+PP Y+ TYR C+GLQRSDR VLEHGVETGIIKRLPHG +IE+HQPL D HGH I Sbjct 426 LIVPPLAYYFTYRICLGLQRSDREVLEHGVETGIIKRLPHGEFIEIHQPLAGTDSHGHAI 485 Query 481 PLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREA---GHAAEQRALAALREH 537 PL+YQGA +PK+MNKLG+AG GS D A E AL A GH A L E Sbjct 486 PLEYQGAAVPKKMNKLGTAGHAVPGSIWTPDPAEETKALERARGNGHGAGHGKLEGSEET 545 Query 538 QDSI 541 + Sbjct 546 TTEV 549 >gi|257055121|ref|YP_003132953.1| cytochrome b subunit of the bc complex [Saccharomonospora viridis DSM 43017] gi|256584993|gb|ACU96126.1| cytochrome b subunit of the bc complex [Saccharomonospora viridis DSM 43017] Length=555 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/515 (68%), Positives = 428/515 (84%), Gaps = 3/515 (0%) Query 10 IGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFF 69 + + +A A + D RYH + LRRQ+NKVFPTHWSFLLGE+ALYSF+VL+++G+YLTLFF Sbjct 14 LAKRVAEAANNADQRYHLAQGLRRQMNKVFPTHWSFLLGELALYSFIVLILSGIYLTLFF 73 Query 70 DPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHL 129 DPSM +V Y+G Y+ L+GVEMSRA +S L+ISFEVRGGLF+RQ+HHWAAL+F AA+ VH+ Sbjct 74 DPSMAEVVYDGPYKNLQGVEMSRALESTLEISFEVRGGLFIRQMHHWAALIFVAAMFVHM 133 Query 130 ARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPV 189 R+FFTGAFRRPRE NWVIG+LLLIL MFEG+FGYSLPDDLLSG G+RA LS ITL +PV Sbjct 134 FRVFFTGAFRRPREANWVIGALLLILGMFEGFFGYSLPDDLLSGTGIRATLSGITLSVPV 193 Query 190 IGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRT 249 IGTW HWALFGG+FPGT+++PR+YALHIL++PGI+LAL+ HLALVW+QKHTQFPG R Sbjct 194 IGTWAHWALFGGEFPGTVIVPRMYALHILIVPGIMLALVAAHLALVWYQKHTQFPGVRRK 253 Query 250 EHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFY 309 E NVVGVR+MPVFA K G +FA + G + LM GL QIN +W++GPY PSQVSAGSQPD+Y Sbjct 254 ETNVVGVRIMPVFALKGGFWFAVVTGFIALMSGLFQINAVWHIGPYNPSQVSAGSQPDWY 313 Query 310 MMWTEGLARIWPPWEFYFWHHTIPAPVWV--AVIMGLVFVLLPAYPFLEKRFTGDYAHHN 367 + W +G+ R++P WE Y +T+P PV+ A+ MG++F LL AYPF+E++F+ D AHHN Sbjct 314 LAWADGILRVYPAWELYLGDYTVP-PVFFAGAIGMGILFTLLIAYPFIERKFSKDTAHHN 372 Query 368 LLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFV 427 LLQRPRD PVRT++G MA+ F+MVL ++ NDI+A K+ ISLNA TW GRIG++ILPP Sbjct 373 LLQRPRDAPVRTSLGVMALTFFMVLEISGFNDIVAFKYDISLNAMTWAGRIGLLILPPLA 432 Query 428 YFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGA 487 YFITYR C+GLQRSDR VLEHGVETGIIKRLPHG +IE+HQPLGPVDEHGHPIPL+YQGA Sbjct 433 YFITYRICLGLQRSDREVLEHGVETGIIKRLPHGEFIEVHQPLGPVDEHGHPIPLEYQGA 492 Query 488 PLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREA 522 +PK+MN+LGSAG P +G+ L D E AAL A Sbjct 493 HVPKKMNELGSAGKPVAGTMLTPDPPEETAALERA 527 >gi|134098270|ref|YP_001103931.1| cytochrome b, membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|291004309|ref|ZP_06562282.1| cytochrome b, membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133910893|emb|CAM01006.1| cytochrome b, membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=552 Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/525 (66%), Positives = 426/525 (82%), Gaps = 3/525 (0%) Query 2 SPKLSPPNIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLIT 61 +P S + + A A+++D R+ + +RRQLNKVFPTHWSFLLGEIALYSFV+LL+T Sbjct 6 TPTKSESAVYKKAATAADELDQRFRFAKGMRRQLNKVFPTHWSFLLGEIALYSFVLLLLT 65 Query 62 GVYLTLFFDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMF 121 GV+LTLFFDPSM +V Y+GVY+ L+GVEMS+A+ S LDISFEVRGGLF+RQ+HHWAAL+F Sbjct 66 GVWLTLFFDPSMEEVVYDGVYRNLQGVEMSKAFASTLDISFEVRGGLFIRQLHHWAALIF 125 Query 122 AAAIMVHLARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALS 181 A++M H+ARIFFTGAFR+PRE+NW IG+LLLIL MFEG+FGYSLPDDLLSG G+RA LS Sbjct 126 VASMMAHMARIFFTGAFRKPRESNWTIGALLLILGMFEGFFGYSLPDDLLSGTGIRATLS 185 Query 182 SITLGMPVIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHT 241 I L +P++GTWLHWALFGG+FPG +IPRLY LH+LL+PGI+L LI HLALVW+QKHT Sbjct 186 GIVLSIPLLGTWLHWALFGGEFPGMEIIPRLYVLHVLLIPGIMLGLIAAHLALVWYQKHT 245 Query 242 QFPGPGRTEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVS 301 QFPG R E NVVG+R+MP FA K G+ FA + GVL +M GL QINPIWNLGPY SQVS Sbjct 246 QFPGVRRKETNVVGIRIMPTFAVKGGSLFAVVTGVLAIMSGLFQINPIWNLGPYNASQVS 305 Query 302 AGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAPVWV--AVIMGLVFVLLPAYPFLEKRF 359 A SQPD+Y+ W +G+ R+WP WE Y +T+P PV+ A+ MG++F +L AYP +E++ Sbjct 306 AASQPDWYLAWADGILRVWPAWELYLGPYTVP-PVFFAGAIGMGILFTVLIAYPAIERKL 364 Query 360 TGDYAHHNLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIG 419 + D AHHNLLQRPRDVPVRT++G MA++F+MVL ++ ND+IA +F+ISLNA TW GR+G Sbjct 365 SKDDAHHNLLQRPRDVPVRTSLGMMALSFFMVLMISGNNDVIAFQFNISLNAMTWFGRLG 424 Query 420 MVILPPFVYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHP 479 +++LPP Y++TYR C+GLQR+DR VLEHGVETGIIKRLPHG +IE+HQPLGPVDEHGHP Sbjct 425 LLLLPPIAYWVTYRICLGLQRADREVLEHGVETGIIKRLPHGEFIEIHQPLGPVDEHGHP 484 Query 480 IPLQYQGAPLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGH 524 L YQGAP+PK+MNKLG+AG P GS L D E AL A H Sbjct 485 EELPYQGAPVPKKMNKLGAAGHPVPGSLLKPDPQEETEALERALH 529 >gi|324998036|ref|ZP_08119148.1| ubiquinol-cytochrome C reductase cytochrome b subunit [Pseudonocardia sp. P1] Length=571 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/530 (66%), Positives = 426/530 (81%), Gaps = 3/530 (0%) Query 9 NIGEVLARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLF 68 + E A + +D R+HP+A LR+Q NKVFPTHWSF+LGEIALYSF++++++G+YL LF Sbjct 13 GLNEKGAEALDQLDQRFHPAAGLRKQFNKVFPTHWSFMLGEIALYSFIIVILSGIYLALF 72 Query 69 FDPSMVDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVH 128 FDPSM ++ YNG Y PLRGV MSRAY+SAL+ISFEVRGGLF+RQ+HHWAAL+F A++++H Sbjct 73 FDPSMEEIVYNGPYDPLRGVHMSRAYESALEISFEVRGGLFMRQLHHWAALLFVASMIIH 132 Query 129 LARIFFTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMP 188 + R+FFTGAFR+PRE NW IG +L++L F G+ GYSLPDDLLSG+GLR A S ITL +P Sbjct 133 MFRVFFTGAFRKPREANWTIGIVLILLGTFAGFTGYSLPDDLLSGVGLRIA-SGITLTVP 191 Query 189 VIGTWLHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGR 248 ++GTW+HWALFGG+FPGT +IPRLY LH+L+LPGIILALI +HL LVW+QKHTQFPGPGR Sbjct 192 IMGTWVHWALFGGEFPGTEIIPRLYILHVLVLPGIILALIAVHLGLVWYQKHTQFPGPGR 251 Query 249 TEHNVVGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDF 308 TE NVVGVR++P FA K GAFFA + GVL L+ GL QIN IW+LGPY S +SAGSQPDF Sbjct 252 TEKNVVGVRILPQFAAKGGAFFAVVAGVLALIAGLFQINGIWHLGPYDASHISAGSQPDF 311 Query 309 YMMWTEGLARIWPPWEFY-FWHHTIPAP-VWVAVIMGLVFVLLPAYPFLEKRFTGDYAHH 366 YM+W+EG+ RI+PPWEFY F +TIPA + A + ++FV+ YP LE+RFTGD A H Sbjct 312 YMLWSEGMGRIFPPWEFYLFGEYTIPAAFIPTAGFLPVLFVVAGMYPALERRFTGDDALH 371 Query 367 NLLQRPRDVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPF 426 NLLQRPRDVPVRTA+GAMAI+FY+ L + ND I+ FHISLNATTW GR+G++I+PP Sbjct 372 NLLQRPRDVPVRTALGAMAISFYLWLVMCGFNDWISYFFHISLNATTWAGRLGLMIVPPI 431 Query 427 VYFITYRWCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQG 486 VY++TYRWC+GLQ+SDR+VLEHG+ETGIIKRLPHG +IE+HQPL VD HGH I L YQG Sbjct 432 VYWVTYRWCLGLQKSDRAVLEHGIETGIIKRLPHGEFIEVHQPLAGVDSHGHAIELDYQG 491 Query 487 APLPKRMNKLGSAGSPGSGSFLFADSAAEDAALREAGHAAEQRALAALRE 536 +PKRMN+LGSAG P GS + D A E L A H A +R L E Sbjct 492 TSVPKRMNQLGSAGEPVPGSLMKPDPAEESRELAHARHEAHERELTERDE 541 >gi|225021890|ref|ZP_03711082.1| hypothetical protein CORMATOL_01922 [Corynebacterium matruchotii ATCC 33806] gi|224945347|gb|EEG26556.1| hypothetical protein CORMATOL_01922 [Corynebacterium matruchotii ATCC 33806] Length=540 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/525 (64%), Positives = 416/525 (80%), Gaps = 3/525 (0%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 LA +ID+RY +A +RRQ+NKVFPTHWSF+LGEIALYSF++LL+TGVYLTLFFDPS+ Sbjct 5 LAEIGNNIDSRYTAAAGIRRQINKVFPTHWSFMLGEIALYSFLILLLTGVYLTLFFDPSI 64 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 V Y+G Y PL GVEMSRAY++AL++SFEVRGGLF+RQ+HHWAALMF ++ VH+ RIF Sbjct 65 TKVIYDGAYLPLNGVEMSRAYETALNLSFEVRGGLFIRQMHHWAALMFMVSMTVHMLRIF 124 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NW+IG +LL+L M EG+ GYSLPDDLLSG+GLR +S+I +G+P+IGTW Sbjct 125 FTGAFRRPREANWIIGCVLLLLGMAEGFMGYSLPDDLLSGVGLRI-MSAIIVGLPIIGTW 183 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 +HW +FGGDFP +++ R Y H+L++PG+IL LI HLALVW+QKHTQFPGPGR E+NV Sbjct 184 MHWLIFGGDFPSELMLDRFYIAHVLIIPGVILGLIAAHLALVWYQKHTQFPGPGRAENNV 243 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVR++P+F K+ AF GVL LM GL IN IW LGPY P+QVSAGSQPD YM+WT Sbjct 244 VGVRILPLFGIKAAAFGLITAGVLALMAGLTTINAIWLLGPYNPAQVSAGSQPDIYMLWT 303 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +GLAR+ P WE Y H+T+P WVA++ GL+ VLL AYPF+E + TGD AHHNLLQRPR Sbjct 304 DGLARVMPAWELYLGHYTVPGAFWVAMLAGLMVVLLIAYPFIEAKITGDTAHHNLLQRPR 363 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 DVPVRT++G M IAFY ++TL+ ND+ A F +SLNA TW+GRIG+++LPP YF+TYR Sbjct 364 DVPVRTSLGMMGIAFYFLVTLSGGNDLFAYHFGVSLNAMTWVGRIGLIVLPPLAYFVTYR 423 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 CIGLQRSDR VLEHG+ETG+IK +P+GA++E+HQPLG VDEHGHP+PL Y GAP+PK+M Sbjct 424 ICIGLQRSDREVLEHGIETGVIKMMPNGAFVEIHQPLGEVDEHGHPVPLPYAGAPVPKQM 483 Query 494 NKLGSAGSPGSGSFL--FADSAAEDAALREAGHAAEQRALAALRE 536 N+LG +G PG G D A + A + H E L AL E Sbjct 484 NQLGFSGHPGRGVLTPDPEDVARKAAEIEHENHQEEYEMLQALNE 528 >gi|227833520|ref|YP_002835227.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Corynebacterium aurimucosum ATCC 700975] gi|227454536|gb|ACP33289.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Corynebacterium aurimucosum ATCC 700975] Length=540 Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/525 (64%), Positives = 417/525 (80%), Gaps = 3/525 (0%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 LA+ ++D RY + LR QLNKVFPTHWSF+LGE+ALYSF++L++TG+YL LFFDPS+ Sbjct 5 LAQMGNNMDERYSAAGVLRTQLNKVFPTHWSFMLGEMALYSFIILVLTGIYLALFFDPSI 64 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 V Y+G Y PL GVEMSRAY +ALDISFEVRGGLFVRQ+HHWAALMF +++ H+ RIF Sbjct 65 TKVIYDGGYTPLNGVEMSRAYATALDISFEVRGGLFVRQMHHWAALMFMMSMIAHMLRIF 124 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NW+IG L++L M EG+ GYSLPDDLLSG+GLR +S+I LG+P+IGTW Sbjct 125 FTGAFRRPREANWIIGCALILLGMVEGFLGYSLPDDLLSGVGLRI-MSAIILGLPIIGTW 183 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 LHWA+FGGDFP +++ R Y LH+L++PGIIL LI HL +VWFQKHTQFPGPGR E+NV Sbjct 184 LHWAIFGGDFPSDLMLDRFYILHVLVIPGIILGLIAAHLIMVWFQKHTQFPGPGRAENNV 243 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVR+MPVFA K+ + GVL L+ GL+ IN IWNLGPY PSQVSAGSQPD YM+WT Sbjct 244 VGVRIMPVFATKAIGMGMMVAGVLALISGLMTINAIWNLGPYNPSQVSAGSQPDIYMLWT 303 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +G+AR+ P WE Y ++TIP+ WVA++ GL+ VLL AYPF+EK+ TGD AHHNLLQRPR Sbjct 304 DGVARVMPAWELYIGNYTIPSAFWVALLCGLMVVLLFAYPFIEKKLTGDDAHHNLLQRPR 363 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 DVPVR+AIGA AI F++++TL+ ND +A F ISLNA TW+GRIG+++LPP YF+TYR Sbjct 364 DVPVRSAIGAAAIVFFLLVTLSGGNDHVAHFFQISLNAMTWVGRIGLIVLPPIAYFMTYR 423 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 C+GLQRSDR VLEHG+ETG+IK+LP+GA+IE+HQPLGPVD+HGHPIPL+Y GA +PK++ Sbjct 424 ICVGLQRSDREVLEHGIETGVIKQLPNGAFIEVHQPLGPVDDHGHPIPLEYAGAQVPKQL 483 Query 494 NKLGSAGSPGSGSFLFADSA--AEDAALREAGHAAEQRALAALRE 536 N+LG A S G F D A + +R HA E L E Sbjct 484 NQLGLADSETQGIFSTDDPAIVSRVNEIRHENHAEETEMFRQLNE 528 >gi|227504666|ref|ZP_03934715.1| ubiquinol-cytochrome C reductase cytochrome B subunit [Corynebacterium striatum ATCC 6940] gi|227198753|gb|EEI78801.1| ubiquinol-cytochrome C reductase cytochrome B subunit [Corynebacterium striatum ATCC 6940] Length=540 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/511 (66%), Positives = 415/511 (82%), Gaps = 6/511 (1%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 LA+ ++D+RY + LR QLNKVFPTHWSF+LGE+ALYSF++LL+TG+YL LFFDPS+ Sbjct 5 LAKMGNNMDSRYSAAGVLRTQLNKVFPTHWSFMLGEMALYSFIILLLTGIYLALFFDPSI 64 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 V Y+G Y PL GVEMSRAY +ALD+SFEVRGGLFVRQ+HHWAALMF +++ H+ RIF Sbjct 65 TKVIYDGAYTPLNGVEMSRAYATALDLSFEVRGGLFVRQMHHWAALMFMMSMVAHMLRIF 124 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NW+IG L++L M EG+ GYSLPDDLLSG+GLR +S+I LG+P+IGTW Sbjct 125 FTGAFRRPREANWIIGCALILLGMVEGFLGYSLPDDLLSGVGLRI-MSAIILGLPIIGTW 183 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 LHWA+FGGDFP +++ R Y LH+L++PGIIL L+ HL +VWFQKHTQFPGPGR E+NV Sbjct 184 LHWAIFGGDFPSDLMLDRFYILHVLVIPGIILGLVAAHLIMVWFQKHTQFPGPGRAENNV 243 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VGVR+MPVFA K+ + GVL LM GLL IN IW LGPY PSQVSAGSQPD YM+WT Sbjct 244 VGVRIMPVFATKAIGMGMMVAGVLALMSGLLTINAIWLLGPYNPSQVSAGSQPDIYMLWT 303 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +G+AR+ P WE Y ++TIP+ WVA++ G + VLL AYPFLEK+FTGD AHHNLLQRPR Sbjct 304 DGVARVMPAWELYLGNYTIPSAFWVALLCGAMVVLLFAYPFLEKKFTGDDAHHNLLQRPR 363 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 DVPVR+AIGAMAI F++++TL+ ND +A F ISLNA TW+GRIG+++LPP YF+TYR Sbjct 364 DVPVRSAIGAMAITFFLLVTLSGGNDHVAHFFQISLNAMTWVGRIGLIVLPPIAYFMTYR 423 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 C+GLQRSDR VLEHG+ETG+IK+LP+GA+IE+HQPLGPVDEHGHP+PL+Y GA +PK++ Sbjct 424 ICVGLQRSDREVLEHGIETGVIKQLPNGAFIEVHQPLGPVDEHGHPVPLEYAGAQVPKQL 483 Query 494 NKLGSAGSPGSGSFLFADSAAEDAALREAGH 524 N+LG A + G F A +DAAL H Sbjct 484 NQLGFADAETQGIF-----APDDAALMHRVH 509 >gi|10336543|dbj|BAB13773.1| cytochrome b subunit [Corynebacterium glutamicum] Length=539 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/526 (64%), Positives = 420/526 (80%), Gaps = 4/526 (0%) Query 14 LARQAEDIDTRYHPSAALRRQLNKVFPTHWSFLLGEIALYSFVVLLITGVYLTLFFDPSM 73 LA ++D+RY ++ +RRQ+NKVFPTHWSF+LGEIALYSF+VLL+TGVYLTLFFDPS+ Sbjct 3 LATVGNNLDSRYTMASGIRRQINKVFPTHWSFMLGEIALYSFIVLLLTGVYLTLFFDPSI 62 Query 74 VDVTYNGVYQPLRGVEMSRAYQSALDISFEVRGGLFVRQIHHWAALMFAAAIMVHLARIF 133 V Y+G Y PL GVEMSRAY +ALDISFEVRGGLF+RQ+HHWAAL+F +++VH+ RIF Sbjct 63 TKVIYDGGYLPLNGVEMSRAYATALDISFEVRGGLFIRQMHHWAALLFVVSMLVHMLRIF 122 Query 134 FTGAFRRPRETNWVIGSLLLILAMFEGYFGYSLPDDLLSGLGLRAALSSITLGMPVIGTW 193 FTGAFRRPRE NW+IG +L+IL M EG+ GYSLPDDLLSG+GLR +S+I +G+P+IGTW Sbjct 123 FTGAFRRPREANWIIGVVLIILGMAEGFMGYSLPDDLLSGVGLRI-MSAIIVGLPIIGTW 181 Query 194 LHWALFGGDFPGTILIPRLYALHILLLPGIILALIGLHLALVWFQKHTQFPGPGRTEHNV 253 +HW +FGGDFP +++ R Y H+L++P I+L LI HLALVW+QKHTQFPG GRTE+NV Sbjct 182 MHWLIFGGDFPSDLMLDRFYIAHVLIIPAILLGLIAAHLALVWYQKHTQFPGAGRTENNV 241 Query 254 VGVRVMPVFAFKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSQVSAGSQPDFYMMWT 313 VG+R+MP+FA K+ AF + G L L+ G+ IN IWNLGPY PSQVSAGSQPD YM+WT Sbjct 242 VGIRIMPLFAVKAVAFGLIVFGFLALLAGVTTINAIWNLGPYNPSQVSAGSQPDVYMLWT 301 Query 314 EGLARIWPPWEFYFWHHTIPAPVWVAVIMGLVFVLLPAYPFLEKRFTGDYAHHNLLQRPR 373 +G AR+ P WE Y ++TIPA WVAV++G++ VLL YPF+E++FTGD AHHNLLQRPR Sbjct 302 DGAARVMPAWELYLGNYTIPAVFWVAVMLGILVVLLVTYPFIERKFTGDDAHHNLLQRPR 361 Query 374 DVPVRTAIGAMAIAFYMVLTLAAMNDIIALKFHISLNATTWIGRIGMVILPPFVYFITYR 433 DVPVRT++G MA+ FY++LT++ ND+ A++FH+SLNA TWIGRIG+++ P YFITYR Sbjct 362 DVPVRTSLGVMALVFYILLTVSGGNDVYAMQFHVSLNAMTWIGRIGLIVGPAIAYFITYR 421 Query 434 WCIGLQRSDRSVLEHGVETGIIKRLPHGAYIELHQPLGPVDEHGHPIPLQYQGAPLPKRM 493 CIGLQRSDR VLEHG+ETGIIK++P+GA+IE+HQPLGPVD+HGHPIPL Y GA +PK+M Sbjct 422 LCIGLQRSDREVLEHGIETGIIKQMPNGAFIEVHQPLGPVDDHGHPIPLPYAGAAVPKQM 481 Query 494 NKLGSAGSPGSGSFLFADSAAEDAALRE---AGHAAEQRALAALRE 536 N+LG A G F D A +E A H E L AL E Sbjct 482 NQLGYAEVETRGGFFGPDPEDIRAKAKEIEHANHIEEANTLRALNE 527 Lambda K H 0.327 0.143 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1216677624312 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40