BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2206
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841697|ref|NP_336734.1| hypothetical protein MT2262 [Mycoba... 470 6e-131
gi|289762368|ref|ZP_06521746.1| conserved hypothetical protein [... 459 1e-127
gi|289750800|ref|ZP_06510178.1| conserved membrane protein [Myco... 395 3e-108
gi|342859917|ref|ZP_08716570.1| hypothetical protein MCOL_13598 ... 331 5e-89
gi|118463892|ref|YP_881489.1| hypothetical protein MAV_2285 [Myc... 328 5e-88
gi|41408044|ref|NP_960880.1| hypothetical protein MAP1946 [Mycob... 326 2e-87
gi|297634795|ref|ZP_06952575.1| transmembrane protein [Mycobacte... 324 8e-87
gi|254823309|ref|ZP_05228310.1| hypothetical protein MintA_25499... 320 8e-86
gi|296166078|ref|ZP_06848524.1| integral membrane protein [Mycob... 317 8e-85
gi|118618848|ref|YP_907180.1| transmembrane protein [Mycobacteri... 316 2e-84
gi|183983241|ref|YP_001851532.1| transmembrane protein [Mycobact... 313 1e-83
gi|2342604|emb|CAB11372.1| hypothetical protein MLCB22.07 [Mycob... 299 3e-79
gi|27735282|sp|Q9CCF6.2|Y869_MYCLE RecName: Full=Uncharacterized... 298 6e-79
gi|333990337|ref|YP_004522951.1| transmembrane protein [Mycobact... 283 2e-74
gi|108800269|ref|YP_640466.1| hypothetical protein Mmcs_3303 [My... 277 9e-73
gi|120404541|ref|YP_954370.1| hypothetical protein Mvan_3570 [My... 276 1e-72
gi|240168266|ref|ZP_04746925.1| transmembrane protein [Mycobacte... 275 5e-72
gi|315443876|ref|YP_004076755.1| hypothetical protein Mspyr1_227... 273 1e-71
gi|145223530|ref|YP_001134208.1| hypothetical protein Mflv_2943 ... 271 5e-71
gi|297731786|ref|ZP_06960904.1| transmembrane protein [Mycobacte... 263 1e-68
gi|118473726|ref|YP_888550.1| integral membrane protein [Mycobac... 256 2e-66
gi|339295120|gb|AEJ47231.1| hypothetical protein CCDC5079_2041 [... 248 5e-64
gi|169629042|ref|YP_001702691.1| hypothetical protein MAB_1955c ... 241 8e-62
gi|317506574|ref|ZP_07964367.1| transmembrane protein [Segnilipa... 203 2e-50
gi|15827393|ref|NP_301656.1| hypothetical protein ML0869 [Mycoba... 202 3e-50
gi|296393473|ref|YP_003658357.1| hypothetical protein Srot_1053 ... 201 1e-49
gi|343924157|ref|ZP_08763720.1| hypothetical protein GOALK_002_0... 196 3e-48
gi|262202958|ref|YP_003274166.1| hypothetical protein Gbro_3066 ... 191 5e-47
gi|226307094|ref|YP_002767054.1| hypothetical protein RER_36070 ... 190 1e-46
gi|229490436|ref|ZP_04384277.1| integral membrane protein [Rhodo... 190 2e-46
gi|226360284|ref|YP_002778062.1| hypothetical protein ROP_08700 ... 183 2e-44
gi|111018155|ref|YP_701127.1| hypothetical protein RHA1_ro01142 ... 180 1e-43
gi|54023672|ref|YP_117914.1| hypothetical protein nfa17040 [Noca... 180 2e-43
gi|312140197|ref|YP_004007533.1| integral membrane protein [Rhod... 174 8e-42
gi|334563267|ref|ZP_08516258.1| hypothetical protein CbovD2_0173... 166 4e-39
gi|333918941|ref|YP_004492522.1| hypothetical protein AS9A_1270 ... 157 2e-36
gi|172040922|ref|YP_001800636.1| hypothetical protein cur_1242 [... 156 2e-36
gi|326382506|ref|ZP_08204197.1| hypothetical protein SCNU_06190 ... 156 3e-36
gi|258653423|ref|YP_003202579.1| hypothetical protein Namu_3259 ... 149 3e-34
gi|213966510|ref|ZP_03394679.1| integral membrane protein [Coryn... 149 5e-34
gi|227504658|ref|ZP_03934707.1| hypothetical membrane protein [C... 147 1e-33
gi|300780798|ref|ZP_07090652.1| integral membrane protein [Coryn... 146 2e-33
gi|336325305|ref|YP_004605271.1| hypothetical protein CRES_0751 ... 145 4e-33
gi|134098236|ref|YP_001103897.1| hypothetical protein SACE_1653 ... 145 5e-33
gi|227488496|ref|ZP_03918812.1| integral membrane protein [Coryn... 142 3e-32
gi|68535787|ref|YP_250492.1| hypothetical protein jk0712 [Coryne... 142 3e-32
gi|340794093|ref|YP_004759556.1| hypothetical protein CVAR_1127 ... 142 4e-32
gi|300784101|ref|YP_003764392.1| hypothetical protein AMED_2187 ... 140 1e-31
gi|302525341|ref|ZP_07277683.1| conserved hypothetical protein [... 137 9e-31
gi|256375501|ref|YP_003099161.1| hypothetical protein Amir_1363 ... 137 1e-30
>gi|15841697|ref|NP_336734.1| hypothetical protein MT2262 [Mycobacterium tuberculosis CDC1551]
gi|31793385|ref|NP_855878.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|57116956|ref|NP_216722.2| transmembrane protein [Mycobacterium tuberculosis H37Rv]
71 more sequence titles
Length=236
Score = 470 bits (1210), Expect = 6e-131, Method: Compositional matrix adjust.
Identities = 235/236 (99%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR
Sbjct 1 MKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY
Sbjct 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT
Sbjct 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG
Sbjct 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
>gi|289762368|ref|ZP_06521746.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709874|gb|EFD73890.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=235
Score = 459 bits (1181), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 232/236 (99%), Positives = 232/236 (99%), Gaps = 4/236 (1%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR
Sbjct 4 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 63
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
RHTKKGPVAPAPMTAAQARARRKSLAGPK ERRAEKAANRARMTERRERMMAGEEAY
Sbjct 64 RHTKKGPVAPAPMTAAQARARRKSLAGPK----ERRAEKAANRARMTERRERMMAGEEAY 119
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT
Sbjct 120 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 179
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG
Sbjct 180 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 235
>gi|289750800|ref|ZP_06510178.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289691387|gb|EFD58816.1| conserved membrane protein [Mycobacterium tuberculosis T92]
Length=227
Score = 395 bits (1015), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 203/211 (97%), Positives = 204/211 (97%), Gaps = 2/211 (0%)
Query 26 GCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSL 85
G PD+ G DTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSL
Sbjct 19 GLIPDA--RPGRDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSL 76
Query 86 AGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLG 145
AGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLG
Sbjct 77 AGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLG 136
Query 146 LFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESR 205
LFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESR
Sbjct 137 LFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESR 196
Query 206 WRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
WRLGLYAAGRASQIRRLRAPRPQVERGGDVG
Sbjct 197 WRLGLYAAGRASQIRRLRAPRPQVERGGDVG 227
>gi|342859917|ref|ZP_08716570.1| hypothetical protein MCOL_13598 [Mycobacterium colombiense CECT
3035]
gi|342133049|gb|EGT86269.1| hypothetical protein MCOL_13598 [Mycobacterium colombiense CECT
3035]
Length=230
Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 164/236 (70%), Positives = 197/236 (84%), Gaps = 6/236 (2%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG +K Q D +A G + + D +R +Q TGPKGRPTPKRN++R
Sbjct 1 MKLLGRKK---DQDTDLDENAAIAGGS---AVAGASGDATREAQRTGPKGRPTPKRNEAR 54
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R+ +KGPVAPAPMTA++ARARRK+LAGPKLSREERRA+KAANRARM+ RRE+MMAGEE Y
Sbjct 55 RNVRKGPVAPAPMTASEARARRKTLAGPKLSREERRADKAANRARMSNRREKMMAGEEGY 114
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRD+GP+RRYVRDVVDSRRNLLGLFMPS L L+FVMF VPQ+Q ++SPAML+L+A+M+
Sbjct 115 LLPRDQGPIRRYVRDVVDSRRNLLGLFMPSTLFLMFVMFGVPQLQLWVSPAMLVLMAVMS 174
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
+D +ILGRKV +LVD KFPSNTESRW+LGLYAAGRASQ+RRLRAPRPQV+ G VG
Sbjct 175 VDGLILGRKVSKLVDAKFPSNTESRWKLGLYAAGRASQMRRLRAPRPQVKHGASVG 230
>gi|118463892|ref|YP_881489.1| hypothetical protein MAV_2285 [Mycobacterium avium 104]
gi|254774957|ref|ZP_05216473.1| hypothetical protein MaviaA2_09834 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165179|gb|ABK66076.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=230
Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/235 (69%), Positives = 194/235 (83%), Gaps = 6/235 (2%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG +K + + +G D + SR + TGPKGRPTPKR+++R
Sbjct 1 MKLLGRKKDQDEDLDEQTAASGGSDVA------GAADAASREPRRTGPKGRPTPKRSEAR 54
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R+ +KGPVAPAPMTA++ARARRK+LAGPKLSREERRA+KAANRARM+ERRERMMAGEE Y
Sbjct 55 RNARKGPVAPAPMTASEARARRKTLAGPKLSREERRADKAANRARMSERRERMMAGEEGY 114
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRD+GPVRRYVRD+VDSRRNLLGLFMPS L L+F+MF VPQ+Q Y+SPAML+L+A+M+
Sbjct 115 LLPRDQGPVRRYVRDIVDSRRNLLGLFMPSTLFLMFIMFGVPQLQLYISPAMLVLMAVMS 174
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
ID +ILGRKV R+VD KFP+NTESRW+LGLYAAGRASQ+RRLRAPRPQV+ G V
Sbjct 175 IDGLILGRKVSRMVDAKFPNNTESRWKLGLYAAGRASQMRRLRAPRPQVKHGSSV 229
>gi|41408044|ref|NP_960880.1| hypothetical protein MAP1946 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396399|gb|AAS04263.1| hypothetical protein MAP_1946 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461930|gb|EGO40783.1| Protein of unknown function (DUF3043) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=230
Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/235 (69%), Positives = 193/235 (83%), Gaps = 6/235 (2%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG +K + + +G D + SR + TGPKGRPTPKR+++R
Sbjct 1 MKLLGRKKDQDEDLDEQTAASGGSDVA------GAADAASREPRRTGPKGRPTPKRSEAR 54
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R+ +KGPVAPAPMTA++ARARRK+LAGPKLSREERRA+KAANRARM+ERRERMMAGEE Y
Sbjct 55 RNARKGPVAPAPMTASEARARRKTLAGPKLSREERRADKAANRARMSERRERMMAGEEGY 114
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRD+GPVRRYVRD+VDSRRNLLGLFMPS L L+F+MF VPQ+Q Y+SPAML+L+A+M+
Sbjct 115 LLPRDQGPVRRYVRDIVDSRRNLLGLFMPSTLFLMFIMFGVPQLQLYISPAMLVLMAVMS 174
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
ID +ILGRKV R+VD KFP+NTES W+LGLYAAGRASQ+RRLRAPRPQV+ G V
Sbjct 175 IDGLILGRKVSRMVDAKFPNNTESHWKLGLYAAGRASQMRRLRAPRPQVKHGSSV 229
>gi|297634795|ref|ZP_06952575.1| transmembrane protein [Mycobacterium tuberculosis KZN 4207]
gi|313659120|ref|ZP_07816000.1| hypothetical protein MtubKV_11893 [Mycobacterium tuberculosis
KZN V2475]
gi|339298741|gb|AEJ50851.1| hypothetical protein CCDC5180_2014 [Mycobacterium tuberculosis
CCDC5180]
Length=164
Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/164 (100%), Positives = 164/164 (100%), Gaps = 0/164 (0%)
Query 73 MTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRY 132
MTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRY
Sbjct 1 MTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRY 60
Query 133 VRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGR 192
VRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGR
Sbjct 61 VRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGR 120
Query 193 LVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
LVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG
Sbjct 121 LVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 164
>gi|254823309|ref|ZP_05228310.1| hypothetical protein MintA_25499 [Mycobacterium intracellulare
ATCC 13950]
Length=227
Score = 320 bits (821), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 156/206 (76%), Positives = 180/206 (88%), Gaps = 4/206 (1%)
Query 34 TSGSDTSRGSQT----TGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPK 89
++ SD + G TGPKGRPTPKRN++RR+ KKGPVAPAPMT+A+ARARRKSLAGPK
Sbjct 21 SAASDVAGGPDAAPRRTGPKGRPTPKRNEARRNAKKGPVAPAPMTSAEARARRKSLAGPK 80
Query 90 LSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMP 149
LSREERRAEK ANRARM+ERR RMMAGEE YLLPRD+GP+RRYVRDVVDSRRNLLGLFMP
Sbjct 81 LSREERRAEKTANRARMSERRNRMMAGEEGYLLPRDQGPIRRYVRDVVDSRRNLLGLFMP 140
Query 150 SALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLG 209
S L L+FVMF VPQ+Q ++SPAML L+A+M++D +ILGRKV +LVD KFP NTESRW+LG
Sbjct 141 STLFLMFVMFGVPQLQLWISPAMLALMAVMSVDGLILGRKVSKLVDAKFPDNTESRWKLG 200
Query 210 LYAAGRASQIRRLRAPRPQVERGGDV 235
LYAAGRASQ+RRLRAPRPQV+ G V
Sbjct 201 LYAAGRASQMRRLRAPRPQVKHGASV 226
>gi|296166078|ref|ZP_06848524.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898573|gb|EFG78133.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=227
Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/197 (78%), Positives = 176/197 (90%), Gaps = 0/197 (0%)
Query 40 SRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEK 99
S GS+ T PKGRPTPKRN++RR +KGPVAPAPMTAA+ARARRKSLAGPKLSREER+A++
Sbjct 31 SGGSRGTSPKGRPTPKRNEARRTARKGPVAPAPMTAAEARARRKSLAGPKLSREERKADR 90
Query 100 AANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMF 159
ANRARMT RRERMMAG+EAYLLPRD+GP+RRYVRDVVDSRRNLLGLFMP+ L L+F MF
Sbjct 91 VANRARMTNRRERMMAGDEAYLLPRDQGPIRRYVRDVVDSRRNLLGLFMPATLFLMFAMF 150
Query 160 AVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQI 219
PQ+Q Y+SPAML+L+A+M D ++LGRKV +LVD KFP NTESRW+LGLYAA RASQ+
Sbjct 151 TTPQLQLYVSPAMLVLMAVMMADGLLLGRKVSKLVDAKFPDNTESRWKLGLYAASRASQM 210
Query 220 RRLRAPRPQVERGGDVG 236
RRLR PRPQV+RGGDVG
Sbjct 211 RRLRTPRPQVKRGGDVG 227
>gi|118618848|ref|YP_907180.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118570958|gb|ABL05709.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=234
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/235 (75%), Positives = 197/235 (84%), Gaps = 2/235 (0%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG +K H + AD S + D +SG TS S TSRG +TTGPKGRPTPKRN +
Sbjct 1 MKLLGRKKDH-DEGADISAASDHADESAANSGDTSSSATSRGPKTTGPKGRPTPKRNDAT 59
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R +KKGPV PAPMT+A+ARARRK LA PKLSREER+AEKAA RARM ERRERMMAG+EAY
Sbjct 60 R-SKKGPVVPAPMTSAEARARRKKLARPKLSREERKAEKAAGRARMAERRERMMAGDEAY 118
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRD+GPVRRYVRDVVD+RRNLLGLFMPSAL LLF MFAVPQ+Q Y+SPAML+L+ALMT
Sbjct 119 LLPRDQGPVRRYVRDVVDARRNLLGLFMPSALALLFAMFAVPQLQLYMSPAMLVLMALMT 178
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
ID IIL RKV LVD KFP+NTE RW+LGLYAAGRASQ+RR+RAPRP+VERG V
Sbjct 179 IDGIILARKVSNLVDVKFPNNTEGRWKLGLYAAGRASQMRRMRAPRPKVERGASV 233
>gi|183983241|ref|YP_001851532.1| transmembrane protein [Mycobacterium marinum M]
gi|183176567|gb|ACC41677.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=234
Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/235 (74%), Positives = 197/235 (84%), Gaps = 2/235 (0%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG +K H + AD S + D +SG TS + TSRG +TTGPKGRPTPKRN +
Sbjct 1 MKLLGRKKDH-DEGADISAASDHADESAANSGDTSSAATSRGPKTTGPKGRPTPKRNDAT 59
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R +KKGPV PAPMT+A+ARARRK LA PKLSREER+AEKAA RARM ERRERMMAG+EAY
Sbjct 60 R-SKKGPVVPAPMTSAEARARRKKLARPKLSREERKAEKAAGRARMAERRERMMAGDEAY 118
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRD+GPVRRYVRDVVD+RRNLLGLFMPSAL LLF MFAVPQ+Q Y+SPAML+L+ALMT
Sbjct 119 LLPRDQGPVRRYVRDVVDARRNLLGLFMPSALALLFAMFAVPQLQLYMSPAMLVLMALMT 178
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
ID IIL RKV LVD KFP+NTE RW+LGLYAAGRASQ+RR+RAPRP+VERG +
Sbjct 179 IDGIILARKVSNLVDVKFPNNTEGRWKLGLYAAGRASQMRRMRAPRPKVERGASL 233
>gi|2342604|emb|CAB11372.1| hypothetical protein MLCB22.07 [Mycobacterium leprae]
Length=247
Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/237 (68%), Positives = 190/237 (81%), Gaps = 9/237 (3%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQS- 59
VKLLG +KS+G Q + S D + PD+ SRGS TT PKGRPT KR+ +
Sbjct 19 VKLLGRKKSYG-QDIETSDDNVGSEASLPDT-------LSRGSSTTAPKGRPTRKRDDAD 70
Query 60 RRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEA 119
RRHTKKGP+ PAPMTA++ARARRKSLA PK R ERRA++AA++A++T+RRERMMAGEEA
Sbjct 71 RRHTKKGPITPAPMTASEARARRKSLAPPKCHRAERRAKRAASKAQITDRRERMMAGEEA 130
Query 120 YLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALM 179
YL PRD+GPVRRY+RD+VD+RRN LGLF PSAL LLF+ F VPQ+Q Y+SPAML+LL++M
Sbjct 131 YLPPRDQGPVRRYIRDLVDARRNALGLFTPSALVLLFITFGVPQLQLYMSPAMLVLLSVM 190
Query 180 TIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
ID IILGRK+ +LVD KFPSNTES WRLGLYAAGRASQ+RRLR PRPQVE G VG
Sbjct 191 GIDGIILGRKISKLVDVKFPSNTESHWRLGLYAAGRASQMRRLRVPRPQVEHGSSVG 247
>gi|27735282|sp|Q9CCF6.2|Y869_MYCLE RecName: Full=Uncharacterized protein ML0869
Length=229
Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/237 (68%), Positives = 190/237 (81%), Gaps = 9/237 (3%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQS- 59
+KLLG +KS+G Q + S D + PD+ SRGS TT PKGRPT KR+ +
Sbjct 1 MKLLGRKKSYG-QDIETSDDNVGSEASLPDT-------LSRGSSTTAPKGRPTRKRDDAD 52
Query 60 RRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEA 119
RRHTKKGP+ PAPMTA++ARARRKSLA PK R ERRA++AA++A++T+RRERMMAGEEA
Sbjct 53 RRHTKKGPITPAPMTASEARARRKSLAPPKCHRAERRAKRAASKAQITDRRERMMAGEEA 112
Query 120 YLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALM 179
YL PRD+GPVRRY+RD+VD+RRN LGLF PSAL LLF+ F VPQ+Q Y+SPAML+LL++M
Sbjct 113 YLPPRDQGPVRRYIRDLVDARRNALGLFTPSALVLLFITFGVPQLQLYMSPAMLVLLSVM 172
Query 180 TIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
ID IILGRK+ +LVD KFPSNTES WRLGLYAAGRASQ+RRLR PRPQVE G VG
Sbjct 173 GIDGIILGRKISKLVDVKFPSNTESHWRLGLYAAGRASQMRRLRVPRPQVEHGSSVG 229
>gi|333990337|ref|YP_004522951.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333486305|gb|AEF35697.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=228
Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/222 (66%), Positives = 175/222 (79%), Gaps = 5/222 (2%)
Query 13 QRADASPDAGSKD--GCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAP 70
+R D + AGS D G D T +R S T PKGRPTPKR+ R ++GPVAP
Sbjct 6 RRKDEAGSAGSADSAGGAVDLDSTESEAAAR-SGLTAPKGRPTPKRDA--RARRRGPVAP 62
Query 71 APMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVR 130
APMTAA+ARARRKSLAGPKLS+EERR KA R RM +RRERM+AG+E+ LL RDRGPVR
Sbjct 63 APMTAAEARARRKSLAGPKLSKEERRVAKAQRRERMAQRRERMLAGDESALLERDRGPVR 122
Query 131 RYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKV 190
RYVRD+VD+R NLLGLFMP AL L+FVM AVPQVQ+Y+SPAM++L+ LM +D ++L RKV
Sbjct 123 RYVRDIVDARYNLLGLFMPVALGLMFVMIAVPQVQYYISPAMMLLMILMAVDGVLLARKV 182
Query 191 GRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERG 232
GRLVDTK+P NTE+RW+LG+YAA RAS +RR+RAPRPQV RG
Sbjct 183 GRLVDTKYPDNTEARWKLGIYAASRASTLRRMRAPRPQVRRG 224
>gi|108800269|ref|YP_640466.1| hypothetical protein Mmcs_3303 [Mycobacterium sp. MCS]
gi|119869397|ref|YP_939349.1| hypothetical protein Mkms_3365 [Mycobacterium sp. KMS]
gi|126435892|ref|YP_001071583.1| hypothetical protein Mjls_3314 [Mycobacterium sp. JLS]
gi|108770688|gb|ABG09410.1| hypothetical protein Mmcs_3303 [Mycobacterium sp. MCS]
gi|119695486|gb|ABL92559.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126235692|gb|ABN99092.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=225
Score = 277 bits (708), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 149/238 (63%), Positives = 180/238 (76%), Gaps = 15/238 (6%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG RK+ Q DA+ A + + SG DT + T PKGRPTPKR+ ++
Sbjct 1 MKLLG-RKNEDDQPEDAAVTASA-------ASPESGPDTR--ERRTAPKGRPTPKRDAAK 50
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R +GPVAPAP+TAA+AR RRK L GPKLS+EER+AEK RA M ERRE+MMAG++ Y
Sbjct 51 R---RGPVAPAPLTAAEARRRRKELRGPKLSKEERKAEKLERRASMAERREKMMAGDDGY 107
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVP--QVQFYLSPAMLILLAL 178
LLPRD+GPVRR+VRDVVDSRRN+LGLFMP+AL L+FVM AVP +VQ LSPAML+L+ +
Sbjct 108 LLPRDKGPVRRFVRDVVDSRRNVLGLFMPAALALIFVMLAVPSIEVQRLLSPAMLVLVLI 167
Query 179 MTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
M ID ++GRKV RLVD KFP NTES W+LG YAA RASQ+RR+RAPRPQVERG V
Sbjct 168 MIIDGFVVGRKVNRLVDEKFPGNTESGWKLGFYAASRASQLRRMRAPRPQVERGAKVA 225
>gi|120404541|ref|YP_954370.1| hypothetical protein Mvan_3570 [Mycobacterium vanbaalenii PYR-1]
gi|119957359|gb|ABM14364.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=250
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/238 (61%), Positives = 175/238 (74%), Gaps = 14/238 (5%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
VKLLG + + D+ P A RT TT PKG+PTPKR+++
Sbjct 25 VKLLGRKNDDAGEPEDSVPAADDSADAAAAGERT----------TTPPKGKPTPKRSEAT 74
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R ++GPVAPAP+T+A+AR RRK + GPKLSREER+AE+ RA M+ERRE+MMAGE+AY
Sbjct 75 R--RRGPVAPAPLTSAEARKRRKEMRGPKLSREERKAERMVRRAEMSERREKMMAGEDAY 132
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVP--QVQFYLSPAMLILLAL 178
LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSAL L+FVM A P +VQ +LSPAML+L+ +
Sbjct 133 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALFLIFVMLAAPSVKVQAFLSPAMLVLVLI 192
Query 179 MTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
M +D LGRKV R+ D KFP NTE+ W+LG YAA RASQ+RR+RAPRPQVERG V
Sbjct 193 MVVDGFFLGRKVNRMADQKFPGNTETGWKLGFYAASRASQLRRMRAPRPQVERGTPVA 250
>gi|240168266|ref|ZP_04746925.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=165
Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/165 (82%), Positives = 154/165 (94%), Gaps = 1/165 (0%)
Query 73 MTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRY 132
MTAA+ARARRKSL+GPKLSR ERRAE+ A+RARM+ERRERMMAGEEAYLLPRD+GP+RRY
Sbjct 1 MTAAEARARRKSLSGPKLSRAERRAERTASRARMSERRERMMAGEEAYLLPRDQGPIRRY 60
Query 133 VRDVVDSRR-NLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVG 191
VRDVVD+RR +LLGLFMPSAL LLFVMFAVPQ+Q Y+SPAML+L+ALMT+D I+LGRKV
Sbjct 61 VRDVVDARRFSLLGLFMPSALALLFVMFAVPQLQLYMSPAMLVLMALMTVDGIMLGRKVS 120
Query 192 RLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
R VD KFP+NTESRW+LGLYAAGRASQ+RR+RAPRPQVERG +G
Sbjct 121 RRVDAKFPNNTESRWKLGLYAAGRASQMRRMRAPRPQVERGASIG 165
>gi|315443876|ref|YP_004076755.1| hypothetical protein Mspyr1_22750 [Mycobacterium sp. Spyr1]
gi|315262179|gb|ADT98920.1| hypothetical protein Mspyr1_22750 [Mycobacterium sp. Spyr1]
Length=225
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/238 (61%), Positives = 177/238 (75%), Gaps = 15/238 (6%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG R R PD+ D+G + R + T PKG+PTPKR+++
Sbjct 1 MKLLGRRNDDA--RDPDEPDST-------DAGTEIAAPVERTA--TAPKGKPTPKRSEAA 49
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R ++GPVAPAPMT+A+AR RRK L GPKLSREER+AE+A RA M ERRERMMAGE+AY
Sbjct 50 R--RRGPVAPAPMTSAEARKRRKELRGPKLSREERKAERAERRAEMGERRERMMAGEDAY 107
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVP--QVQFYLSPAMLILLAL 178
LLPRDRGPVRRYVRD+VD+RRNLLGLFMP+AL ++F+M AVP +VQ +SPAML+L+ +
Sbjct 108 LLPRDRGPVRRYVRDIVDARRNLLGLFMPAALGMIFIMLAVPSVEVQALISPAMLVLVLI 167
Query 179 MTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
M +D LGRKV R+ D KFP NTE+ W+LG YAA RASQ+RR+RAPRPQVERG V
Sbjct 168 MVVDGFFLGRKVNRMADAKFPDNTETGWKLGFYAASRASQLRRMRAPRPQVERGTPVA 225
>gi|145223530|ref|YP_001134208.1| hypothetical protein Mflv_2943 [Mycobacterium gilvum PYR-GCK]
gi|145216016|gb|ABP45420.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=223
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 138/218 (64%), Positives = 173/218 (80%), Gaps = 7/218 (3%)
Query 23 SKDGCRPDSGRTSGSDTSRGSQ--TTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARA 80
++D PDS +G++ + + T PKG+PTPKR+++ R ++GPVAPAPMT+A+AR
Sbjct 9 ARDPDEPDST-DAGTEIAAPVERTATAPKGKPTPKRSEAAR--RRGPVAPAPMTSAEARK 65
Query 81 RRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSR 140
RRK L GPKLSREER+AE+A RA M ERRERMMAGE+AYLLPRDRGPVRRYVRD+VD+R
Sbjct 66 RRKELRGPKLSREERKAERAERRAEMGERRERMMAGEDAYLLPRDRGPVRRYVRDIVDAR 125
Query 141 RNLLGLFMPSALTLLFVMFAVP--QVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKF 198
RNLLGLFMP+AL ++F+M AVP +VQ +SPAML+L+ +M +D LGRKV R+ D KF
Sbjct 126 RNLLGLFMPAALGMIFIMLAVPSVEVQALISPAMLVLVLIMVVDGFFLGRKVNRMADAKF 185
Query 199 PSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
P NTE+ W+LG YAA RASQ+RR+RAPRPQVERG V
Sbjct 186 PDNTETGWKLGFYAASRASQLRRMRAPRPQVERGTPVA 223
>gi|297731786|ref|ZP_06960904.1| transmembrane protein [Mycobacterium tuberculosis KZN R506]
Length=131
Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%)
Query 106 MTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQ 165
MTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQ
Sbjct 1 MTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQ 60
Query 166 FYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAP 225
FYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAP
Sbjct 61 FYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAP 120
Query 226 RPQVERGGDVG 236
RPQVERGGDVG
Sbjct 121 RPQVERGGDVG 131
>gi|118473726|ref|YP_888550.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118175013|gb|ABK75909.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=228
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/238 (59%), Positives = 173/238 (73%), Gaps = 12/238 (5%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+KLLG RK++ + AS A D + + D R TT PKGRPTPKR+++
Sbjct 1 MKLLG-RKNNDDDKNVASDAA---DSAVDEQNGPAAEDRPR---TTPPKGRPTPKRSEAA 53
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
+ ++GPVAPAP+TAA+ARARRK + L++EER+AEK RA M ERRERMMAGEEAY
Sbjct 54 K--RRGPVAPAPLTAAEARARRKEMRK-TLTKEERKAEKITRRAEMAERRERMMAGEEAY 110
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQF--YLSPAMLILLAL 178
LLPRDRGPVRRYVRD+VDSRRN+LGLFMP+AL ++F M A+P VQ LS AML L+A+
Sbjct 111 LLPRDRGPVRRYVRDIVDSRRNILGLFMPAALAMIFFMLALPNVQAQQVLSYAMLALVAV 170
Query 179 MTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDVG 236
M +D LGRKV R+VD KFP NTE W+LG YA+ RASQ+RR+RAPRP VERG +
Sbjct 171 MVLDGFYLGRKVNRMVDAKFPDNTEGGWKLGFYASSRASQLRRMRAPRPMVERGAKIA 228
>gi|339295120|gb|AEJ47231.1| hypothetical protein CCDC5079_2041 [Mycobacterium tuberculosis
CCDC5079]
Length=124
Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%)
Query 113 MMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAM 172
MMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAM
Sbjct 1 MMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAM 60
Query 173 LILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERG 232
LILLALMTIDAIILGRKVGRLVDT+FPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERG
Sbjct 61 LILLALMTIDAIILGRKVGRLVDTEFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERG 120
Query 233 GDVG 236
GDVG
Sbjct 121 GDVG 124
>gi|169629042|ref|YP_001702691.1| hypothetical protein MAB_1955c [Mycobacterium abscessus ATCC
19977]
gi|169241009|emb|CAM62037.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=224
Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/237 (56%), Positives = 170/237 (72%), Gaps = 15/237 (6%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
+ LLG +KS A D + P SG TS +D S +Q KGRPTPKR+ +
Sbjct 1 MNLLGRKKS-------APSDDAAATSALP-SGETSVTDASGPAQAG--KGRPTPKRDAGK 50
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAY 120
R +GPVAPAP+T+A+AR RRK+L GPKLSR ER+ E A RARM + RE+MMAG+EAY
Sbjct 51 R---RGPVAPAPLTSAEARQRRKALRGPKLSRAERKVENAERRARMADNREKMMAGDEAY 107
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVP--QVQFYLSPAMLILLAL 178
LLPRD+GPVR + RD+VDSRRN+LGLFMP AL L+F MFAVP QVQ +++PAML+L+ +
Sbjct 108 LLPRDKGPVRAFARDIVDSRRNVLGLFMPLALFLIFTMFAVPSVQVQMWMTPAMLVLMIV 167
Query 179 MTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
M +D I +GR V + V +FP++ E ++LG YAA RASQ+R++RAPRP+V RG V
Sbjct 168 MIVDGIFVGRLVNKRVYERFPTSDEGGFKLGWYAASRASQLRKMRAPRPRVNRGEPV 224
>gi|317506574|ref|ZP_07964367.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974]
gi|316255136|gb|EFV14413.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974]
Length=170
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/160 (62%), Positives = 125/160 (79%), Gaps = 0/160 (0%)
Query 70 PAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPV 129
P P+T A+ARARRK+LAGPKL+REERRA+ AA R R + R RMMAGEEAYLLPRD+GPV
Sbjct 3 PTPLTGAEARARRKALAGPKLTREERRAQSAARRERQADSRARMMAGEEAYLLPRDKGPV 62
Query 130 RRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRK 189
R YVRDVVDSRR+L G FMP A T++ V F P++Q Y++PAML+LL M ++ + LGRK
Sbjct 63 RAYVRDVVDSRRSLSGAFMPIAFTMIAVSFGSPELQAYVAPAMLVLLFAMVVEGLWLGRK 122
Query 190 VGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQV 229
V LV +FP NTE +R+G YA R++Q+RR+R P+PQV
Sbjct 123 VSHLVAARFPDNTEPGYRIGWYAFTRSAQMRRMRVPKPQV 162
>gi|15827393|ref|NP_301656.1| hypothetical protein ML0869 [Mycobacterium leprae TN]
gi|221229870|ref|YP_002503286.1| hypothetical protein MLBr_00869 [Mycobacterium leprae Br4923]
gi|25333738|pir||G87017 conserved hypothetical protein ML0869 [imported] - Mycobacterium
leprae
gi|13092943|emb|CAC31250.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932977|emb|CAR70964.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=124
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/124 (77%), Positives = 108/124 (88%), Gaps = 0/124 (0%)
Query 113 MMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAM 172
MMAGEEAYL PRD+GPVRRY+RD+VD+RRN LGLF PSAL LLF+ F VPQ+Q Y+SPAM
Sbjct 1 MMAGEEAYLPPRDQGPVRRYIRDLVDARRNALGLFTPSALVLLFITFGVPQLQLYMSPAM 60
Query 173 LILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERG 232
L+LL++M ID IILGRK+ +LVD KFPSNTES WRLGLYAAGRASQ+RRLR PRPQVE G
Sbjct 61 LVLLSVMGIDGIILGRKISKLVDVKFPSNTESHWRLGLYAAGRASQMRRLRVPRPQVEHG 120
Query 233 GDVG 236
VG
Sbjct 121 SSVG 124
>gi|296393473|ref|YP_003658357.1| hypothetical protein Srot_1053 [Segniliparus rotundus DSM 44985]
gi|296180620|gb|ADG97526.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=226
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/211 (51%), Positives = 143/211 (68%), Gaps = 10/211 (4%)
Query 25 DGCRPDSGRTSGSDTSRGSQTTGP------KGRPTPKRNQSRRHTKKGPVAPAPMTAAQA 78
D RP++G + ++ QT P KGRPTPKR ++ ++GPV PAP+T A+A
Sbjct 12 DEDRPEAGL---PEPNQSEQTIAPPGKTPGKGRPTPKRKEAA-GGRRGPVPPAPLTGAEA 67
Query 79 RARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVD 138
RARRK+LAGPKLSR ER+A+ A R + ++ RERMMAG+EAYLL RD+GPVR YVRDVVD
Sbjct 68 RARRKALAGPKLSRAERKAQSAQRREKQSQARERMMAGDEAYLLARDKGPVRAYVRDVVD 127
Query 139 SRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKF 198
SRR+L G FMP A ++ PQ Q +PAML+LL M ++ + LGRKV +V KF
Sbjct 128 SRRSLAGAFMPIAFVMIGASLLAPQYQVLATPAMLVLLVAMVVEGVWLGRKVNNMVLAKF 187
Query 199 PSNTESRWRLGLYAAGRASQIRRLRAPRPQV 229
P E+ + L YA R++Q+RR+R P+P+V
Sbjct 188 PDTAETGFGLAWYAFTRSTQMRRMRVPKPRV 218
>gi|343924157|ref|ZP_08763720.1| hypothetical protein GOALK_002_01110 [Gordonia alkanivorans NBRC
16433]
gi|343765962|dbj|GAA10646.1| hypothetical protein GOALK_002_01110 [Gordonia alkanivorans NBRC
16433]
Length=227
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/206 (49%), Positives = 141/206 (69%), Gaps = 3/206 (1%)
Query 30 DSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPK 89
D T S ++GS+TT KGRPTPKR ++ + ++GPVAP P T ++ARAR+K L
Sbjct 25 DDAATEDSAPAKGSKTTPGKGRPTPKRREAEK--RRGPVAPPPTTRSEARARKKELKN-T 81
Query 90 LSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMP 149
LS++E++ A RA+ E+RERMM G+EAYL+PRD+GPVRRY RD+VD+RRN GLFMP
Sbjct 82 LSKDEKKQLAAERRAKRLEQRERMMEGDEAYLMPRDKGPVRRYTRDIVDARRNFAGLFMP 141
Query 150 SALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLG 209
A+ L+ +MF VPQ + ++ + LM +D ILGR V R V ++P + + ++LG
Sbjct 142 FAILLIVLMFMVPQAAALTNLILVAFVVLMAVDGFILGRLVNRRVAERYPDSQDGGFKLG 201
Query 210 LYAAGRASQIRRLRAPRPQVERGGDV 235
YA RA Q+R++RAP+P V RG +V
Sbjct 202 WYAFTRAMQLRKMRAPKPSVSRGDEV 227
>gi|262202958|ref|YP_003274166.1| hypothetical protein Gbro_3066 [Gordonia bronchialis DSM 43247]
gi|262086305|gb|ACY22273.1| hypothetical protein Gbro_3066 [Gordonia bronchialis DSM 43247]
Length=228
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/221 (49%), Positives = 146/221 (67%), Gaps = 15/221 (6%)
Query 23 SKDGCRPDSGRTSGSDTSRGSQTTGP----KGRPTPKR--NQSRRHTKKGPVAPAPMTAA 76
S D + T+G+D S GS G KG+PTPKR Q+RR +GPVAP P T A
Sbjct 15 SDDATTGEVVDTTGADDSAGSVKGGSYTPGKGKPTPKRREQQARR---RGPVAPPPTTRA 71
Query 77 QARARRKSLAGP--KLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVR 134
+ARARRK L K+ R++R AE+ R E+RERMMAG+E YL+PRD+GPVR++ R
Sbjct 72 EARARRKELKATETKVDRKQRNAERREQR---LEQRERMMAGDERYLMPRDKGPVRKFTR 128
Query 135 DVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLV 194
D+VDSRRN GLFMP A+ L+ VMF +P + + +P +L+ + M IDA+ILGR V R V
Sbjct 129 DIVDSRRNFAGLFMPFAIVLIVVMF-IPNLAYLSTPVLLVFVIFMAIDAVILGRLVNRKV 187
Query 195 DTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
+FP +++ ++LG YA RA Q+R++RAP PQV G +V
Sbjct 188 RERFPDSSDGGFKLGWYAFTRAMQMRKMRAPSPQVSPGDEV 228
>gi|226307094|ref|YP_002767054.1| hypothetical protein RER_36070 [Rhodococcus erythropolis PR4]
gi|226186211|dbj|BAH34315.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=218
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/181 (55%), Positives = 131/181 (73%), Gaps = 4/181 (2%)
Query 49 KGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTE 108
KGRPTPKR + ++GPVAPAP+TA +ARARRK+ G S+E+R+AE A RA +
Sbjct 36 KGRPTPKRRDAE-AKRRGPVAPAPLTAKEARARRKATRG---SKEDRKAEAAERRASSAD 91
Query 109 RRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYL 168
RR RM+AGE+ YLLPRD+GPVR YVRD +D+RRNL+GLFMP AL L+ MF P +Q +
Sbjct 92 RRARMLAGEDKYLLPRDKGPVRAYVRDFIDARRNLVGLFMPLALILIMTMFVTPALQQIV 151
Query 169 SPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQ 228
+ AML+++ M + I LGR + V +FP +T+ ++LG YA RASQIR+LRAP+P+
Sbjct 152 TLAMLVMMLFMVGEGIWLGRMINNRVAERFPDSTDGGFKLGWYAFVRASQIRKLRAPKPR 211
Query 229 V 229
V
Sbjct 212 V 212
>gi|229490436|ref|ZP_04384277.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229322726|gb|EEN88506.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length=216
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/181 (55%), Positives = 131/181 (73%), Gaps = 4/181 (2%)
Query 49 KGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTE 108
KGRPTPKR + ++GPVAPAP+TA +ARARRK+ G S+E+R+AE A RA +
Sbjct 34 KGRPTPKRRDAE-AKRRGPVAPAPLTAKEARARRKATRG---SKEDRKAEAAERRASSAD 89
Query 109 RRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYL 168
RR RM+AGE+ YLLPRD+GPVR YVRD +D+RRNL+GLFMP AL L+ MF P +Q +
Sbjct 90 RRARMLAGEDKYLLPRDKGPVRAYVRDFIDARRNLVGLFMPLALILIMTMFVTPALQQIV 149
Query 169 SPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQ 228
+ AML+++ M + I LGR + V +FP +T+ ++LG YA RASQIR+LRAP+P+
Sbjct 150 TLAMLVMMLFMVGEGIWLGRMINNRVAERFPDSTDGGFKLGWYAFVRASQIRKLRAPKPR 209
Query 229 V 229
V
Sbjct 210 V 210
>gi|226360284|ref|YP_002778062.1| hypothetical protein ROP_08700 [Rhodococcus opacus B4]
gi|226238769|dbj|BAH49117.1| hypothetical protein [Rhodococcus opacus B4]
Length=218
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/215 (50%), Positives = 146/215 (68%), Gaps = 6/215 (2%)
Query 20 DAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQAR 79
D+ + D + +S + + ++ TG KGRPTPKR + ++GPVAPAP+TA +AR
Sbjct 8 DSDNSDKRDVEVAESSTAPEAESAEQTG-KGRPTPKRRDAE-SKRRGPVAPAPLTAKEAR 65
Query 80 ARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDS 139
AR+K+ G S+EER+ A RA ERR RM+AGE+ YLLPRD+GPVR YVRD+VD+
Sbjct 66 ARKKATRG---SKEERKVAAAERRATAAERRARMLAGEDKYLLPRDKGPVRAYVRDIVDA 122
Query 140 RRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFP 199
RRNL+GLFMP AL L+ MF P +Q ++ AMLI++ M I+ + LGRK+ V +FP
Sbjct 123 RRNLVGLFMPLALVLIMAMFVSPALQAIVTLAMLIMMMFMAIEGVWLGRKINNQVRERFP 182
Query 200 SNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGD 234
+ ++LG YA RASQIR+LRAP+P+V R GD
Sbjct 183 DTPDGGFKLGWYAFVRASQIRKLRAPKPRV-RPGD 216
>gi|111018155|ref|YP_701127.1| hypothetical protein RHA1_ro01142 [Rhodococcus jostii RHA1]
gi|110817685|gb|ABG92969.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=245
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 141/216 (66%), Gaps = 14/216 (6%)
Query 28 RPDSGRTSGSDTSRGSQTTGP---------KGRPTPKRNQSRRHTKKGPVAPAPMTAAQA 78
R DS + D +T P KGRPTPKR + ++GPVAPAP+TA +A
Sbjct 33 RGDSDNSDKRDVEVAESSTAPEAESAEQAGKGRPTPKRRDAEAR-RRGPVAPAPLTAKEA 91
Query 79 RARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVD 138
RAR+K+ G S+EER+ A RA ERR RM+AGE+ YLLPRD+GPVR YVRD+VD
Sbjct 92 RARKKATRG---SKEERKVAAAERRATAAERRARMLAGEDKYLLPRDKGPVRAYVRDIVD 148
Query 139 SRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKF 198
+RRNL+GLFMP AL L+ MF P +Q ++ AMLI++ M I+ + LGRK+ V +F
Sbjct 149 ARRNLVGLFMPLALVLIMAMFVSPALQAIVTLAMLIMMMFMAIEGVWLGRKINNQVRERF 208
Query 199 PSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGD 234
P + ++LG YA RASQIR+LRAP+P+V R GD
Sbjct 209 PDTPDGGFKLGWYAFVRASQIRKLRAPKPRV-RPGD 243
>gi|54023672|ref|YP_117914.1| hypothetical protein nfa17040 [Nocardia farcinica IFM 10152]
gi|54015180|dbj|BAD56550.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=231
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/222 (49%), Positives = 145/222 (66%), Gaps = 18/222 (8%)
Query 28 RPDSGRTSGSDTSRGSQTTGP--------------KGRPTPKRNQSRRHTKKGPVAPAPM 73
R +G T + S T GP KGRPTPKR +++ ++GPVAPAP+
Sbjct 14 RGQAGTTDATAESTADATGGPAVTTTKTSPTTTPGKGRPTPKRREAQ-GKRRGPVAPAPL 72
Query 74 TAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYV 133
TA +ARARRK+ G +REER+A A R ERR RM+AGE+ YLLPRD+GPVR +V
Sbjct 73 TAKEARARRKATRG---TREERKAAAAERRLAAQERRARMLAGEDKYLLPRDQGPVRAFV 129
Query 134 RDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRL 193
RD+VD+RRNL+GLFMP AL L+ MFA P +Q ++ ML+++ M I+ ++LGR V
Sbjct 130 RDIVDARRNLVGLFMPMALVLILSMFAAPGLQTIVTLVMLVMMLFMAIEGVLLGRLVNNR 189
Query 194 VDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
V KFP T++ ++LG YA RASQIR++RAP+P+V G V
Sbjct 190 VLEKFPDTTDTGFKLGWYAFVRASQIRKMRAPKPRVGPGDPV 231
>gi|312140197|ref|YP_004007533.1| integral membrane protein [Rhodococcus equi 103S]
gi|325676921|ref|ZP_08156593.1| transmembrane protein [Rhodococcus equi ATCC 33707]
gi|311889536|emb|CBH48853.1| putative integral membrane protein [Rhodococcus equi 103S]
gi|325552221|gb|EGD21911.1| transmembrane protein [Rhodococcus equi ATCC 33707]
Length=226
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/200 (51%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
Query 36 GSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREER 95
G+ + G+ T G KGRPTPKR ++ K+GPVAPAP+T+ +ARARRK+ G K R+
Sbjct 32 GTADAAGASTPG-KGRPTPKRREAE-AKKRGPVAPAPLTSKEARARRKANRGNKEERKAA 89
Query 96 RAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLL 155
AE+ A A RR RM+AGEE YLLPRD+GPVR Y RD+VDSRRNL+GLFMP AL L+
Sbjct 90 AAERRAESA---NRRARMLAGEEKYLLPRDKGPVRAYTRDLVDSRRNLVGLFMPLALVLI 146
Query 156 FVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGR 215
MF P +Q Y++ AML+++ M + LGR + V ++P + + ++LG YA R
Sbjct 147 MAMFLSPVIQNYVTLAMLVMMLFMAGEGYFLGRMINNKVRERYPDSVDGGFKLGWYAFVR 206
Query 216 ASQIRRLRAPRPQVERGGDV 235
ASQIR++RAP P+V+ G V
Sbjct 207 ASQIRKMRAPAPRVKPGDAV 226
>gi|334563267|ref|ZP_08516258.1| hypothetical protein CbovD2_01735 [Corynebacterium bovis DSM
20582]
Length=255
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/233 (44%), Positives = 136/233 (59%), Gaps = 13/233 (5%)
Query 9 SHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRH--TKKG 66
+ GH A A P + D PD T + + T KGRPTPKRN+ R +K
Sbjct 19 ADGHDAATAVPVSAQADTGGPDPDETDAAALPKSR--TPKKGRPTPKRNEVERRAGVRKS 76
Query 67 PVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERR----ERMMAGEEAYLL 122
P AP+T A+AR RRK A +SREE +A K +R + R ERMMAG+E YL+
Sbjct 77 PY-DAPLTPAEARKRRKE-AKASMSREEYKAMKRRDREKAAAARRTANERMMAGDERYLM 134
Query 123 PRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA---VPQVQFYLSPAMLILLALM 179
PRDRG VR++VRD VDS R L+ FMP AL +L +MF VP V +S +++L+ +M
Sbjct 135 PRDRGEVRKFVRDWVDSHRYLMNFFMPVALVVLVIMFVGLKVPAVSQTVSIVLMVLVIVM 194
Query 180 TIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERG 232
++ ++LGR+V R +FP TE+ LG YA RA+ IRR+R P PQV G
Sbjct 195 AVEGLLLGRRVNREARDRFPGTTETGVGLGFYAFSRATMIRRMRTPAPQVAVG 247
>gi|333918941|ref|YP_004492522.1| hypothetical protein AS9A_1270 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481162|gb|AEF39722.1| hypothetical protein AS9A_1270 [Amycolicicoccus subflavus DQS3-9A1]
Length=241
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/235 (48%), Positives = 151/235 (65%), Gaps = 15/235 (6%)
Query 9 SHGHQRADASPDAGSKDGCRPDSGRTSGS---DTSRGSQTTGPKGRPTPKRNQSRRHTKK 65
S A SPDA + SG+T G+ T R T G KGRPTPKRN++ R ++
Sbjct 14 SESEGDAQHSPDASGES-----SGQTRGNAAEQTERRGYTPG-KGRPTPKRNEATRGSR- 66
Query 66 GPVAPAPMTAAQARARRKSLAG-----PKLSREERRAEKAANRARMTERRERMMAGEEAY 120
GP+ PAPMT A+ARAR+K+L PK+S+ E++ A RAR +ERR RMM+GEE Y
Sbjct 67 GPITPAPMTRAEARARKKALKAAKKNQPKMSKAEKKRAAAETRARASERRARMMSGEEDY 126
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQVQFYLSPAMLILLALMT 180
LLPRDRGPVRR R+ VD+RRNL GLFMP AL +L +F P++Q ++ ML+ L M
Sbjct 127 LLPRDRGPVRRLARNFVDARRNLAGLFMPLALLVLLTLFMPPELQGVITLGMLVFLIFMI 186
Query 181 IDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
I+ I+LGR + + ++P + ++ + +G YA RA+Q+R+LR PRPQV G V
Sbjct 187 IEGIMLGRMISNRIRERYPDSDDTGFSIGWYAFVRATQVRKLRVPRPQVRPGDAV 241
>gi|172040922|ref|YP_001800636.1| hypothetical protein cur_1242 [Corynebacterium urealyticum DSM
7109]
gi|171852226|emb|CAQ05202.1| hypothetical protein cu1242 [Corynebacterium urealyticum DSM
7109]
Length=236
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/199 (49%), Positives = 120/199 (61%), Gaps = 11/199 (5%)
Query 46 TGPKGRPTPKRNQSRRH--TKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANR 103
T PKGRPTPKRN+ R ++GP P T A+AR RRK L +S+EE + KA R
Sbjct 39 TPPKGRPTPKRNEQERQAGVRRGPYQ-GPETPAEARKRRKELKA-SMSKEEYKELKAKER 96
Query 104 ARMTER----RERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMF 159
ERMMAG+E YL+ RD+GP RR+VRD VDS R L FMP AL ++ +M
Sbjct 97 QEREAERRHINERMMAGDERYLMDRDKGPERRFVRDWVDSHRYLGNFFMPIALVVVVIMV 156
Query 160 A---VPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRA 216
P + S M +L LM I+ IILGRKV RLV K+P T ++ LG+YA GRA
Sbjct 157 IGLRNPMLANTASLVMFGILILMVIEGIILGRKVNRLVREKYPDTTLGKFGLGMYAFGRA 216
Query 217 SQIRRLRAPRPQVERGGDV 235
+ IR++R P PQVE G DV
Sbjct 217 TMIRKMRNPAPQVEIGEDV 235
>gi|326382506|ref|ZP_08204197.1| hypothetical protein SCNU_06190 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198625|gb|EGD55808.1| hypothetical protein SCNU_06190 [Gordonia neofelifaecis NRRL
B-59395]
Length=221
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/194 (47%), Positives = 130/194 (68%), Gaps = 5/194 (2%)
Query 42 GSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAA 101
GS T G KGRPTPKR ++ R ++GPVAP P T A+ARAR+KSL +++EER+ +
Sbjct 33 GSTTPG-KGRPTPKRREAER--RRGPVAPPPTTRAEARARKKSLRS-SMTKEERKEVSSE 88
Query 102 NRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAV 161
R E+RE+MMAG+E Y++ RD+GPVR+ RD+VDSRRN GLF+P A+ LL V+ V
Sbjct 89 RRRVRLEQREKMMAGDEKYMMARDQGPVRKMARDIVDSRRNFAGLFLPFAVFLLVVLM-V 147
Query 162 PQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRR 221
P + + +L + L+ D++ LGR V + V ++P T++ ++LG Y RA Q+R
Sbjct 148 PNLAVIGNLVLLAFVLLVVFDSLYLGRMVNKRVQERYPDTTDTGFKLGWYCFTRAMQLRM 207
Query 222 LRAPRPQVERGGDV 235
+RAPRPQV+ G V
Sbjct 208 MRAPRPQVKPGDKV 221
>gi|258653423|ref|YP_003202579.1| hypothetical protein Namu_3259 [Nakamurella multipartita DSM
44233]
gi|258556648|gb|ACV79590.1| hypothetical protein Namu_3259 [Nakamurella multipartita DSM
44233]
Length=214
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/196 (48%), Positives = 119/196 (61%), Gaps = 17/196 (8%)
Query 47 GPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARM 106
G KGRPTPKR ++ T+ GPVAP P T +A R K +S++ERRA NR
Sbjct 28 GKKGRPTPKRREAEGRTR-GPVAPPPKTQREAMKRSKEQRS-SMSKDERRAAARTNR--- 82
Query 107 TERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAVPQ--V 164
ERMMAG+E YLLPRDRG VR YVRD+VD+RRN+ G+ +P A+ L FV+ VP +
Sbjct 83 ----ERMMAGDERYLLPRDRGKVRAYVRDLVDARRNVAGILLPIAV-LSFVILLVPVQLI 137
Query 165 QFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTES-----RWRLGLYAAGRASQI 219
Q Y +L+ +A ID+II GR++ + V KFP S + LG YA RA I
Sbjct 138 QAYGPLVLLVAIAAAVIDSIIFGRQISKKVAAKFPQGDSSGQSTKGYSLGFYAFNRACLI 197
Query 220 RRLRAPRPQVERGGDV 235
RR RAPRP+VE G +
Sbjct 198 RRWRAPRPRVETGQQI 213
>gi|213966510|ref|ZP_03394679.1| integral membrane protein [Corynebacterium amycolatum SK46]
gi|213950847|gb|EEB62260.1| integral membrane protein [Corynebacterium amycolatum SK46]
Length=254
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/238 (43%), Positives = 138/238 (58%), Gaps = 29/238 (12%)
Query 16 DASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPK---------GRPTPKRNQSRRH--TK 64
D + DA + G + DT+ GSQ G K GRPTPKRN+ R +
Sbjct 27 DVATDATASSGVK---------DTASGSQQPGKKHSGAFTPKKGRPTPKRNEVERERGIR 77
Query 65 KGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERR----ERMMAGEEAY 120
+GPV AP+TA +AR RRK L +S+EE +A KA RA E+R ERM AG+ Y
Sbjct 78 RGPVE-APLTAKEARQRRKELKA-SMSKEELKAAKARERAERREQRRIADERMAAGDPRY 135
Query 121 LLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMF---AVPQVQFYLSPAMLILLA 177
+LPRD+G R++VRD VDSRR L +F+P AL LL +M ++P++ S ++L+
Sbjct 136 MLPRDQGAERKFVRDWVDSRRFLANVFLPFALILLLIMMIGTSLPKLANIASLIAMVLII 195
Query 178 LMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
+ I+ I +GR+ +L +FP TE W LG YA RASQ RRLR PRPQV G ++
Sbjct 196 ALIIEGIYIGRRAIKLTRERFPKTTEGAWGLGFYAYSRASQPRRLRTPRPQVNIGDEI 253
>gi|227504658|ref|ZP_03934707.1| hypothetical membrane protein [Corynebacterium striatum ATCC
6940]
gi|227198745|gb|EEI78793.1| hypothetical membrane protein [Corynebacterium striatum ATCC
6940]
Length=256
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/244 (41%), Positives = 129/244 (53%), Gaps = 15/244 (6%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSR 60
VKL + + Q DA+ A D G + T PKGRPTPKR+Q
Sbjct 19 VKLPWQKDENASQ--DAAVPASQADTSAAQHGAGEEHSETHRKGYTPPKGRPTPKRDQQE 76
Query 61 --RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTER----RERMM 114
R K+ P A M+ AQ RRK L +S+EE +A K R E +ERM
Sbjct 77 IARGVKRDPNA---MSDAQRYQRRKELKA-SMSKEEWKAYKRKEREESREANRVAQERMA 132
Query 115 AGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMF---AVPQVQFYLSPA 171
+G+E YLLPRD+G VRRYVRD VDSR+ + MP+A+ LL VM P ++S
Sbjct 133 SGDERYLLPRDKGEVRRYVRDWVDSRKFINEWVMPAAIVLLVVMLLGNYNPNFANWVSII 192
Query 172 MLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVER 231
++ +A+ I+ I L RK V KFP TE+ + LG YA RA+Q R+ R P+P+VER
Sbjct 193 SMVFIAIFAIEGIWLARKCNNSVRLKFPGTTEAGFGLGFYAYSRATQPRKWRTPKPRVER 252
Query 232 GGDV 235
G V
Sbjct 253 GATV 256
>gi|300780798|ref|ZP_07090652.1| integral membrane protein [Corynebacterium genitalium ATCC 33030]
gi|300532505|gb|EFK53566.1| integral membrane protein [Corynebacterium genitalium ATCC 33030]
Length=249
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/198 (44%), Positives = 119/198 (61%), Gaps = 11/198 (5%)
Query 46 TGPKGRPTPKRNQSRRHTKKGPV-APAPMTAAQARARRKSLAGPKLSREE----RRAEKA 100
T PKGRPTPKR+ + K+G + P M+ QA +RK L +S+EE ++ E+A
Sbjct 55 TPPKGRPTPKRHD--QEVKRGVIRDPNAMSTPQAAQKRKELKK-SMSKEEWKDYKKQERA 111
Query 101 ANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA 160
RA+ E + +M AGEEAYL+ RD+G VR+YVRD VDSRR + MP+A +L +M
Sbjct 112 QRRAQNKELQAKMDAGEEAYLMDRDKGKVRKYVRDWVDSRRFISNYIMPAAFVMLLIMLI 171
Query 161 ---VPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRAS 217
VPQ+ LS +I +A + +A I+GRK + V KFP ++ + LG+YA RAS
Sbjct 172 GQFVPQMAAVLSTLSMIFIATVLAEAFIIGRKANKAVKEKFPEENDTGFGLGMYAFSRAS 231
Query 218 QIRRLRAPRPQVERGGDV 235
Q R R P+PQV G V
Sbjct 232 QPRNWRTPKPQVALGSKV 249
>gi|336325305|ref|YP_004605271.1| hypothetical protein CRES_0751 [Corynebacterium resistens DSM
45100]
gi|336101287|gb|AEI09107.1| hypothetical protein CRES_0751 [Corynebacterium resistens DSM
45100]
Length=275
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/242 (38%), Positives = 132/242 (55%), Gaps = 9/242 (3%)
Query 2 KLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRNQ-SR 60
K+ + G R + P A S++ + + T KGRPTPKRN+ R
Sbjct 35 KIADEAEQQGTARPLSEPTAASEEKTTTPASEQGDPKPAENKAFTPKKGRPTPKRNEVER 94
Query 61 RHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMT-ERR---ERMMAG 116
+ AP T A+AR R+K L +S++E +A K R + ERR ERMMAG
Sbjct 95 EQGVRREAYEAPTTPAEARKRKKELKA-SMSKQEYKAMKQRERDQAARERRRVNERMMAG 153
Query 117 EEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA---VPQVQFYLSPAML 173
+E YL+ RD+GP R++VRD VD+ R L+ LF+P L ++ +M PQV S M+
Sbjct 154 DEKYLMDRDKGPERKFVRDWVDAHRYLMNLFLPMTLIVIVLMIIGVKNPQVANLASIIMM 213
Query 174 ILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGG 233
++ +M + + L RK+ R+V +FP T+ ++ LG+YA RA+ IRRLR P PQ + G
Sbjct 214 VIFLIMIGEGVWLSRKLNRMVRERFPETTQGKFGLGMYAFTRATMIRRLRTPAPQKQLGD 273
Query 234 DV 235
V
Sbjct 274 KV 275
>gi|134098236|ref|YP_001103897.1| hypothetical protein SACE_1653 [Saccharopolyspora erythraea NRRL
2338]
gi|291004343|ref|ZP_06562316.1| hypothetical protein SeryN2_07477 [Saccharopolyspora erythraea
NRRL 2338]
gi|133910859|emb|CAM00972.1| hypothetical protein SACE_1653 [Saccharopolyspora erythraea NRRL
2338]
Length=211
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/192 (49%), Positives = 121/192 (64%), Gaps = 24/192 (12%)
Query 42 GSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAA 101
G++T G KGRPTPKR ++ ++GPV P P T +A R + S+EERR KAA
Sbjct 29 GARTPG-KGRPTPKRREAE-GKRRGPVPPPPKTQREAMKRARG------SKEERR--KAA 78
Query 102 NRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFAV 161
ERR+RMM G++ YL+PRDRGPVR YVRD+VD+RR+L+GLFMP L+ V+FA
Sbjct 79 -----AERRKRMMEGDDRYLMPRDRGPVRAYVRDIVDTRRHLMGLFMP----LVLVVFAT 129
Query 162 PQVQF-----YLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRA 216
VQ Y + A L+LL M + +LGR+V R V KFP + + LG YA RA
Sbjct 130 TLVQNLVVQQYATLACLVLLLTMAFEGTVLGRQVNRRVRAKFPDAKDRPFSLGWYAFTRA 189
Query 217 SQIRRLRAPRPQ 228
QIR+LR PRP+
Sbjct 190 MQIRKLRMPRPR 201
>gi|227488496|ref|ZP_03918812.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227543101|ref|ZP_03973150.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227091390|gb|EEI26702.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181089|gb|EEI62061.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51866]
Length=253
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/250 (39%), Positives = 128/250 (52%), Gaps = 19/250 (7%)
Query 1 VKLLGHRKSHGHQRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPK------GRPTP 54
+ LL ++K++ + D DA + P T +G Q PK G TP
Sbjct 7 LNLLRNKKTNTEAQTDLPADADKQKDSAPSD--TPAKPKKKGKQAPNPKAFTPKKGHATP 64
Query 55 KRNQSRRH--TKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANR----ARMTE 108
KR R GPV AP + ++ R RRK + +++EE +A K R AR E
Sbjct 65 KRKDVERERGINTGPVD-APASYSEMRRRRKEMKA-SMTKEEYKAYKQKERDQRNARNKE 122
Query 109 RRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSALTLLFVMFA---VPQVQ 165
+++M AGEE YLL RDRGP RR++RD VDSR L MP L LL MF P +
Sbjct 123 IQDKMDAGEEQYLLERDRGPERRFLRDWVDSRHMLSSWLMPVMLVLLVFMFIGLRQPMIS 182
Query 166 FYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAP 225
S +I++ + I+ I GRK R V FP++T W LG YA RASQ RRLR P
Sbjct 183 NTASIVGMIIMLIFLIEGIYQGRKATRAVREHFPNSTLKGWTLGFYAWTRASQPRRLRTP 242
Query 226 RPQVERGGDV 235
+PQVE G ++
Sbjct 243 KPQVEAGTNI 252
>gi|68535787|ref|YP_250492.1| hypothetical protein jk0712 [Corynebacterium jeikeium K411]
gi|260578125|ref|ZP_05846046.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|68263386|emb|CAI36874.1| hypothetical protein jk0712 [Corynebacterium jeikeium K411]
gi|258603764|gb|EEW17020.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length=242
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/231 (40%), Positives = 131/231 (57%), Gaps = 16/231 (6%)
Query 13 QRADASPDAGSKDGCRPDSGRTSGSDTSRGSQTTGPKGRPTPKRN-QSRRHTKKGPVAPA 71
Q ADAS + S D G T TS+ T KG+ TPKRN Q R+H + A
Sbjct 20 QDADASTEVESD----ADGGVTK-EKTSKA--FTPKKGKATPKRNEQERKHGVRRSAYTA 72
Query 72 PMTAAQARARRKSLAGPKLSREERRA----EKAANRARMTERRERMMAGEEAYLLPRDRG 127
P T +AR +RK L +S+EE +A +K ERMMAG+E YL+ RD+G
Sbjct 73 PATPGEARKQRKELKA-SMSKEEYKAMKQRQKDEANRARRRANERMMAGDEEYLMDRDKG 131
Query 128 PVRRYVRDVVDSRRNLLGLFMPSALTLLFVMF---AVPQVQFYLSPAMLILLALMTIDAI 184
P +R+VRD +DSRR ++ F+P AL ++ +M + P + S M+I+ +M + +
Sbjct 132 PEKRFVRDWIDSRRYMMNFFLPLALLVIVIMIFGMSNPSIANLASLVMMIVFLIMIAEGL 191
Query 185 ILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIRRLRAPRPQVERGGDV 235
LGR++ R V+ +FP+N S++ LGLYA RA+ IRRLR P PQ + G V
Sbjct 192 WLGRRINREVNERFPNNPHSKFSLGLYAFFRATMIRRLRTPAPQKQIGDSV 242
>gi|340794093|ref|YP_004759556.1| hypothetical protein CVAR_1127 [Corynebacterium variabile DSM
44702]
gi|340534003|gb|AEK36483.1| hypothetical protein CVAR_1127 [Corynebacterium variabile DSM
44702]
Length=418
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/208 (43%), Positives = 122/208 (59%), Gaps = 11/208 (5%)
Query 37 SDTSRGSQTTGPKGRPTPKRNQSRRH--TKKGPVAPAPMTAAQARARRK----SLAGPKL 90
D S T KGRPTPKRN+ R T++ AP+T +AR R+K S+ +
Sbjct 213 EDASLPKGQTPKKGRPTPKRNEVERQAGTRRAHYD-APLTPKEARERKKAEKDSMTKEEF 271
Query 91 SREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPS 150
++RR + A AR + ERMMAG+ YLLPRD+G + +VR+ VDSRR ++ +F+P
Sbjct 272 KEKKRREREEAASAR-KKANERMMAGDPNYLLPRDQGKEKLFVRNYVDSRRYMMNMFLPI 330
Query 151 ALTLLFVMF---AVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWR 207
AL ++ VM + PQ+ +S ML ++ L+ I+ LGRKV +LVD +FP RW
Sbjct 331 ALIVVLVMIIGMSAPQIANLVSLIMLFVIVLLVIEGFFLGRKVNKLVDERFPERAFGRWT 390
Query 208 LGLYAAGRASQIRRLRAPRPQVERGGDV 235
LG YA RA+ IRR+R P PQV G V
Sbjct 391 LGFYAFTRATMIRRMRTPAPQVNIGDTV 418
>gi|300784101|ref|YP_003764392.1| hypothetical protein AMED_2187 [Amycolatopsis mediterranei U32]
gi|299793615|gb|ADJ43990.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340525513|gb|AEK40718.1| hypothetical protein RAM_11140 [Amycolatopsis mediterranei S699]
Length=215
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/195 (47%), Positives = 118/195 (61%), Gaps = 8/195 (4%)
Query 42 GSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAA 101
G T KG+ TPKR ++ ++GPVAP P T +A R K L R+ K
Sbjct 26 GKAYTPGKGKATPKRREAE-AKRRGPVAPPPTTMREAMKRNKEL------RKANPQTKED 78
Query 102 NRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSA-LTLLFVMFA 160
RA RRE MM G++ LLPRDRGPV+ YVRD+VDSRRNLLGLFMP A L L ++
Sbjct 79 RRAAAKARREAMMRGDDKALLPRDRGPVKAYVRDLVDSRRNLLGLFMPLAILVFLALLVP 138
Query 161 VPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWRLGLYAAGRASQIR 220
+PQVQ Y++ +L +M I+ + GRK+ +LV KFP S LG YA RASQIR
Sbjct 139 LPQVQSYITLLCTAMLLVMAIEGFVNGRKIAKLVREKFPKEAVSGRSLGWYAFVRASQIR 198
Query 221 RLRAPRPQVERGGDV 235
RLR P+P+++ G +
Sbjct 199 RLRMPKPRLKPGDPI 213
>gi|302525341|ref|ZP_07277683.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434236|gb|EFL06052.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=219
Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/204 (44%), Positives = 125/204 (62%), Gaps = 10/204 (4%)
Query 34 TSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSRE 93
T S + + T G KG+ TPKR ++ K+GPVAP P + +A R K L R+
Sbjct 22 TVESPVASKAYTPG-KGKATPKRREAEGR-KRGPVAPPPTSMREAMKRNKEL------RK 73
Query 94 ERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFMPSA-L 152
K R +RRERMM+G++ YL PRD+GPV+ YVRD+VDSRRNLLGLFMP A L
Sbjct 74 ANPVSKEERREAARQRRERMMSGDDKYLPPRDKGPVKAYVRDLVDSRRNLLGLFMPLAIL 133
Query 153 TLLFVMFAVPQVQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRWR-LGLY 211
L ++ P VQ Y++ + +L +M I+ + GRK+ +LV +FP + +R +G Y
Sbjct 134 VFLALLVPAPAVQQYITLVCMAMLLVMAIEGFVNGRKISKLVRERFPKEPATAYRGVGWY 193
Query 212 AAGRASQIRRLRAPRPQVERGGDV 235
A RASQIR+LR P+P+++ G +
Sbjct 194 AFVRASQIRKLRVPKPRLKPGDPI 217
>gi|256375501|ref|YP_003099161.1| hypothetical protein Amir_1363 [Actinosynnema mirum DSM 43827]
gi|255919804|gb|ACU35315.1| hypothetical protein Amir_1363 [Actinosynnema mirum DSM 43827]
Length=212
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/209 (45%), Positives = 121/209 (58%), Gaps = 26/209 (12%)
Query 29 PDSGRTSGSDTSRGSQTTGPKGRPTPKRNQSRRHTKKGPVAPAPMTAAQARARRKSLAGP 88
P+ GRT G KGRPTPKR ++ ++GPVAP P T +A R +
Sbjct 27 PEPGRTPG------------KGRPTPKRREAETK-RRGPVAPPPKTQREALKRMR----- 68
Query 89 KLSREERRAEKAANRARMTERRERMMAGEEAYLLPRDRGPVRRYVRDVVDSRRNLLGLFM 148
+ + K RA RRERMMAG++ YLLPRDRGPV+ Y+RDV+DSRRNL+GLFM
Sbjct 69 -----QSKTSKEERRAAAALRRERMMAGDDKYLLPRDRGPVKAYIRDVIDSRRNLMGLFM 123
Query 149 PSALTLLFVMFAVPQ--VQFYLSPAMLILLALMTIDAIILGRKVGRLVDTKFPSNTESRW 206
P A+ L+FV VP VQ Y + A +L M ++ +ILG V R V KFP
Sbjct 124 PLAI-LVFVALLVPSLVVQQYATLATSFMLLAMIVEGVILGVTVTRRVRAKFPKEKIGGL 182
Query 207 RLGLYAAGRASQIRRLRAPRPQVERGGDV 235
+G Y+ RASQ+R+LR P+P+V G +
Sbjct 183 SVGWYSFIRASQLRKLRVPKPRVGPGTKI 211
Lambda K H
0.319 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 319551017258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40