BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2209
Length=512
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609346|ref|NP_216725.1| integral membrane protein [Mycobact... 1003 0.0
gi|289758329|ref|ZP_06517707.1| integral membrane protein [Mycob... 1001 0.0
gi|289574895|ref|ZP_06455122.1| conserved membrane protein [Myco... 1001 0.0
gi|340627214|ref|YP_004745666.1| putative integral membrane prot... 1000 0.0
gi|308232067|ref|ZP_07414798.2| conserved membrane protein [Myco... 984 0.0
gi|289754317|ref|ZP_06513695.1| integral membrane protein [Mycob... 889 0.0
gi|183983245|ref|YP_001851536.1| hypothetical protein MMAR_3254 ... 617 2e-174
gi|118618854|ref|YP_907186.1| hypothetical protein MUL_3569 [Myc... 581 9e-164
gi|240168270|ref|ZP_04746929.1| hypothetical protein MkanA1_0309... 449 5e-124
gi|289762371|ref|ZP_06521749.1| conserved integral membrane prot... 202 8e-50
gi|183980536|ref|YP_001848827.1| integral membrane protein [Myco... 159 9e-37
gi|340625284|ref|YP_004743736.1| putative integral membrane prot... 153 6e-35
gi|15839627|ref|NP_334664.1| hypothetical protein MT0260 [Mycoba... 153 7e-35
gi|15607387|ref|NP_214760.1| integral membrane protein [Mycobact... 153 9e-35
gi|289572825|ref|ZP_06453052.1| conserved hypothetical protein [... 152 1e-34
gi|308394875|ref|ZP_07491835.2| conserved membrane protein [Myco... 152 1e-34
gi|31791424|ref|NP_853917.1| integral membrane protein [Mycobact... 151 3e-34
gi|258652575|ref|YP_003201731.1| hypothetical protein Namu_2367 ... 111 3e-22
gi|167968968|ref|ZP_02551245.1| hypothetical protein MtubH3_1341... 88.2 3e-15
gi|313675068|ref|YP_004053064.1| major facilitator superfamily m... 67.8 5e-09
gi|91214549|ref|ZP_01251522.1| Permease of the major facilitator... 50.1 9e-04
gi|226355650|ref|YP_002785390.1| hypothetical protein Deide_0774... 49.7 0.001
gi|254510863|ref|ZP_05122930.1| hypothetical protein RKLH11_1398... 49.7 0.001
gi|260062472|ref|YP_003195552.1| Permease of the major facilitat... 48.5 0.003
gi|88797049|ref|ZP_01112639.1| Permease of the major facilitator... 43.1 0.13
gi|325283733|ref|YP_004256274.1| major facilitator superfamily M... 42.0 0.29
gi|220933679|ref|YP_002512578.1| major facilitator transporter [... 41.6 0.39
gi|121611865|ref|YP_999672.1| major facilitator transporter [Ver... 40.8 0.53
gi|227504119|ref|ZP_03934168.1| permease of the major facilitato... 39.3 1.6
gi|254445519|ref|ZP_05058995.1| hypothetical protein VDG1235_376... 38.9 2.1
gi|110835436|ref|YP_694295.1| hypothetical protein ABO_2575 [Alc... 38.5 3.2
gi|344233483|gb|EGV65355.1| general substrate transporter [Candi... 38.1 3.3
gi|256392853|ref|YP_003114417.1| major facilitator superfamily M... 38.1 3.5
gi|335424027|ref|ZP_08553044.1| major facilitator transporter [S... 37.0 7.6
gi|85705176|ref|ZP_01036276.1| hypothetical protein ROS217_04675... 37.0 8.9
>gi|15609346|ref|NP_216725.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15841700|ref|NP_336737.1| hypothetical protein MT2265 [Mycobacterium tuberculosis CDC1551]
gi|31793388|ref|NP_855881.1| integral membrane protein [Mycobacterium bovis AF2122/97]
43 more sequence titles
Length=512
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF
Sbjct 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA
Sbjct 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
Query 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY
Sbjct 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT
Sbjct 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
Query 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA
Sbjct 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
Query 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI
Sbjct 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
Query 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP
Sbjct 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
Query 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP
Sbjct 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
Query 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
APGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Sbjct 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
>gi|289758329|ref|ZP_06517707.1| integral membrane protein [Mycobacterium tuberculosis T85]
gi|289713893|gb|EFD77905.1| integral membrane protein [Mycobacterium tuberculosis T85]
Length=512
Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/512 (99%), Positives = 512/512 (100%), Gaps = 0/512 (0%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF
Sbjct 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA
Sbjct 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
Query 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY
Sbjct 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT
Sbjct 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
Query 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
YLLFVPISLGTTFFSLRAAQS+GSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA
Sbjct 241 YLLFVPISLGTTFFSLRAAQSSGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
Query 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI
Sbjct 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
Query 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP
Sbjct 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
Query 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP
Sbjct 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
Query 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
APGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Sbjct 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
>gi|289574895|ref|ZP_06455122.1| conserved membrane protein [Mycobacterium tuberculosis K85]
gi|289539326|gb|EFD43904.1| conserved membrane protein [Mycobacterium tuberculosis K85]
Length=512
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/512 (99%), Positives = 511/512 (99%), Gaps = 0/512 (0%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF
Sbjct 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA
Sbjct 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
Query 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY
Sbjct 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT
Sbjct 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
Query 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLF VRGLLLGSA
Sbjct 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFEVRGLLLGSA 300
Query 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI
Sbjct 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
Query 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP
Sbjct 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
Query 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP
Sbjct 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
Query 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
APGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Sbjct 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
>gi|340627214|ref|YP_004745666.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|340005404|emb|CCC44563.1| putative conserved integral membrane protein [Mycobacterium canettii
CIPT 140010059]
Length=512
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/512 (99%), Positives = 510/512 (99%), Gaps = 0/512 (0%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF
Sbjct 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTG
Sbjct 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGT 120
Query 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY
Sbjct 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT
Sbjct 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
Query 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA
Sbjct 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
Query 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI
Sbjct 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
Query 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP
Sbjct 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
Query 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP 480
QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRR ARRP
Sbjct 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRTARRP 480
Query 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
APGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Sbjct 481 APGKPAAALPQPRHPAVGVREGAPLDAGQRIA 512
>gi|308232067|ref|ZP_07414798.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308369656|ref|ZP_07418575.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308370946|ref|ZP_07423307.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
22 more sequence titles
Length=503
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/503 (99%), Positives = 503/503 (100%), Gaps = 0/503 (0%)
Query 10 VSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNS 69
+SAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNS
Sbjct 1 MSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNS 60
Query 70 LSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSS 129
LSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSS
Sbjct 61 LSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSS 120
Query 130 VAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWLGAA 189
VAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWLGAA
Sbjct 121 VAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWLGAA 180
Query 190 GLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISL 249
GLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISL
Sbjct 181 GLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISL 240
Query 250 GTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALL 309
GTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALL
Sbjct 241 GTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALL 300
Query 310 CMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAV 369
CMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAV
Sbjct 301 CMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAV 360
Query 370 EATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQAYR 429
EATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQAYR
Sbjct 361 EATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQAYR 420
Query 430 PATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRPAPGKPAAAL 489
PATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRPAPGKPAAAL
Sbjct 421 PATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRPAPGKPAAAL 480
Query 490 PQPRHPAVGVREGAPLDAGQRIA 512
PQPRHPAVGVREGAPLDAGQRIA
Sbjct 481 PQPRHPAVGVREGAPLDAGQRIA 503
>gi|289754317|ref|ZP_06513695.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289694904|gb|EFD62333.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
Length=482
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/464 (99%), Positives = 458/464 (99%), Gaps = 0/464 (0%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF
Sbjct 16 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 75
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA
Sbjct 76 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 135
Query 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY
Sbjct 136 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 195
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT
Sbjct 196 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 255
Query 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA
Sbjct 256 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 315
Query 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI
Sbjct 316 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 375
Query 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP
Sbjct 376 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 435
Query 421 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRP 464
QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLR + P
Sbjct 436 QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRLYFTDAGP 479
>gi|183983245|ref|YP_001851536.1| hypothetical protein MMAR_3254 [Mycobacterium marinum M]
gi|183176571|gb|ACC41681.1| conserved hypothetical integral membrane protein [Mycobacterium
marinum M]
Length=498
Score = 617 bits (1590), Expect = 2e-174, Method: Compositional matrix adjust.
Identities = 338/506 (67%), Positives = 387/506 (77%), Gaps = 26/506 (5%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
M ASRLV S PR FGRLV QG FY+AG+Q+GSGAVVLPVICAHQGLTW AGLL+PAF
Sbjct 1 MTASRLVG--SNPRTPFGRLVTQGSFYSAGMQMGSGAVVLPVICAHQGLTWVAGLLFPAF 58
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA 120
IGAILGNS+SPLILQR GQ RHLLMAAISA+AA L++ NAAVPWTG VAAVF T A
Sbjct 59 SIGAILGNSVSPLILQRFGQYRHLLMAAISASAATLILANAAVPWTGALVAAVFFVTATA 118
Query 121 GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY 180
GVV GVS VAYTDMIS+ L +RRGELLLTQGA GS+LATGVTLVIVP LAHG+EMARY
Sbjct 119 SGVVAGVSGVAYTDMISNKLSVLRRGELLLTQGAVGSLLATGVTLVIVPRLAHGDEMARY 178
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
HDLLWLGAA ++ +G+AALFVGPMRS S R+PLR+IY GF IAR +PWFRRY TT
Sbjct 179 HDLLWLGAASMIVAGVAALFVGPMRSASSAPTVRLPLRDIYRQGFEIARREPWFRRYATT 238
Query 241 YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA 300
YLLF PISLGTTFFSLRAAQS+GSLHVLVILSSI LV+GS+LWR +NR FGVRG+LLGS+
Sbjct 239 YLLFAPISLGTTFFSLRAAQSSGSLHVLVILSSIALVIGSLLWRAVNRRFGVRGMLLGSS 298
Query 301 LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI 360
L + AAAL+C+VAE CGQW WAYGTAFLLATVAAQTVVAASISWIS+ APE++RATLI
Sbjct 299 LFSIAAALVCIVAELCGQWTQMWAYGTAFLLATVAAQTVVAASISWISMFAPEQHRATLI 358
Query 361 CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP 420
C G+TLAAV +T+LG LG +AQ+HATI PV+V LTLA+IAAVASLRAP G++
Sbjct 359 CFGATLAAVVSTLLGAVLGELAQRHATIGPVLVSLTLAIIAAVASLRAP---GLSQTIEA 415
Query 421 QAATLQ-------------AYRPAT---PNPIHSDERSTPPDHLSVRRGQLRHVWDS-RR 463
Q+ ++ A+R T P + R T D RRG+ + + RR
Sbjct 416 QSQLVEKAPMRRLSRARRGAHRLVTGTAPGLGLALTRHTAAD----RRGRYPSLRRAHRR 471
Query 464 PAPPLNRPSCRRAARRPAPGKPAAAL 489
PAP RP C +A RP PG A L
Sbjct 472 PAPSPIRPGCHASAHRPEPGNLATVL 497
>gi|118618854|ref|YP_907186.1| hypothetical protein MUL_3569 [Mycobacterium ulcerans Agy99]
gi|118570964|gb|ABL05715.1| conserved hypothetical integral membrane protein [Mycobacterium
ulcerans Agy99]
Length=470
Score = 581 bits (1498), Expect = 9e-164, Method: Compositional matrix adjust.
Identities = 318/475 (67%), Positives = 361/475 (76%), Gaps = 22/475 (4%)
Query 31 LQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNSLSPLILQRAGQLRHLLMAAIS 90
+Q+GSGAVVLPVICAHQGLTW AGLL+PAF IGAILGNS+SPLILQR GQ RHLLMAAIS
Sbjct 1 MQMGSGAVVLPVICAHQGLTWVAGLLFPAFSIGAILGNSVSPLILQRFGQYRHLLMAAIS 60
Query 91 ATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGELLL 150
A+AA L++ NAAVPWTG VAAVF T A GVV GVS VAYTDM+S+ L +RRGELLL
Sbjct 61 ASAATLILANAAVPWTGALVAAVFFVTATASGVVAGVSGVAYTDMVSNKLSVLRRGELLL 120
Query 151 TQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWLGAAGLVCSGIAALFVGPMRSVSVT 210
TQGA GS+LATGVTLVIVP LAHG+EMARYHDLLWLGAA ++ +G+AALFVGPMRS S
Sbjct 121 TQGAFGSLLATGVTLVIVPRLAHGDEMARYHDLLWLGAASMIVAGVAALFVGPMRSASSA 180
Query 211 TATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGTTFFSLRAAQSNGSLHVLVI 270
R+PLR+IY GF IAR +PWFRRY TTYLLF PISLGTTFFSLRAAQS+GSLHVLVI
Sbjct 181 PTVRLPLRDIYRQGFEIARREPWFRRYATTYLLFAPISLGTTFFSLRAAQSSGSLHVLVI 240
Query 271 LSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFL 330
LSSI V+GS+LWR +NR FGVRG+LLGS+L + AAAL+C+VAE CGQW WAYGTAFL
Sbjct 241 LSSIAFVIGSLLWRAVNRRFGVRGMLLGSSLFSIAAALVCIVAELCGQWTQMWAYGTAFL 300
Query 331 LATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWP 390
LATVAAQTVVAASISWIS+ APE++RATLIC G+TLAAV +T+LG LG +AQ+HATI P
Sbjct 301 LATVAAQTVVAASISWISMFAPEQHRATLICFGATLAAVVSTLLGAVLGELAQRHATIGP 360
Query 391 VVVVLTLAVIAAVASLRAP------TRIGVTADTSPQAATLQAYRPA-------TPNPIH 437
V+V LTLA+IAAVASLRAP D +P +A R A P
Sbjct 361 VLVSLTLAIIAAVASLRAPGLSQTIEAQSQLVDKAPMRRLSRARRGAHRLVTGTAPGLGL 420
Query 438 SDERSTPPDHLSVRRGQ---LRHVWDSRRPAPPLNRPSCRRAARRPAPGKPAAAL 489
+ R T D RRG+ LR RRPAP RP C +A RP PG A L
Sbjct 421 ALTRHTAAD----RRGRYPSLRRA--HRRPAPSPIRPGCHASAHRPEPGNLATVL 469
>gi|240168270|ref|ZP_04746929.1| hypothetical protein MkanA1_03097 [Mycobacterium kansasii ATCC
12478]
Length=468
Score = 449 bits (1155), Expect = 5e-124, Method: Compositional matrix adjust.
Identities = 269/408 (66%), Positives = 323/408 (80%), Gaps = 2/408 (0%)
Query 2 PASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFC 61
P++R V SA + FGRLV QG FYT G+QL + AVVLP ICAHQG+TWAAG+L+PA+
Sbjct 5 PSTRPVAAASARTSPFGRLVTQGTFYTTGMQLSNSAVVLPFICAHQGITWAAGMLFPAYS 64
Query 62 IGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG 121
IG I+GNS SP ILQRAG++RH+L++A +A AAL++ +A +PWTGV AAVFL TT A
Sbjct 65 IGLIMGNSASPAILQRAGRMRHVLLSATAAAVAALLIWDAVIPWTGVYAAAVFLLTTAAA 124
Query 122 GVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYH 181
GVV V++VAYTDM+SS LPA RRGEL LTQGAAGS LATGV L+I PMLA G+++A Y
Sbjct 125 GVVIAVATVAYTDMVSSKLPARRRGELFLTQGAAGSTLATGVMLLIAPMLASGDQIAHYR 184
Query 182 DLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTY 241
DLLWLGA L+ S +AAL VGPMRS S T R PLREIY GFA+A+ QPWFR+Y TY
Sbjct 185 DLLWLGALALIASSVAALLVGPMRSASTTA--RPPLREIYRQGFAVAQDQPWFRQYAMTY 242
Query 242 LLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSAL 301
LLF PI LGTTF+SLRAA+ GSLHVLV+LSS+GLVVGS WR+I R FGVRG+LLGSAL
Sbjct 243 LLFAPICLGTTFYSLRAAKKMGSLHVLVVLSSVGLVVGSAFWRKIYRRFGVRGMLLGSAL 302
Query 302 LNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLIC 361
+ AAL+C+ AE GQW H WAYGT FLLAT+AAQ V AAS+SWISV A E++RATLI
Sbjct 303 CSTTAALVCIAAELSGQWYHLWAYGTVFLLATLAAQPVSAASVSWISVFAAEQHRATLIG 362
Query 362 VGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAP 409
G+TL A+ T+LG LG IAQKHAT+WPVVVVL L+++AA A++RAP
Sbjct 363 FGATLLAITFTLLGGVLGMIAQKHATVWPVVVVLALSLVAAFAAVRAP 410
>gi|289762371|ref|ZP_06521749.1| conserved integral membrane protein [Mycobacterium tuberculosis
GM 1503]
gi|289709877|gb|EFD73893.1| conserved integral membrane protein [Mycobacterium tuberculosis
GM 1503]
Length=433
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF
Sbjct 1 MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF 60
Query 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVP 104
CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVP
Sbjct 61 CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVP 104
>gi|183980536|ref|YP_001848827.1| integral membrane protein [Mycobacterium marinum M]
gi|183173862|gb|ACC38972.1| conserved integral membrane protein [Mycobacterium marinum M]
Length=416
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 131/399 (33%), Positives = 203/399 (51%), Gaps = 20/399 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++ Q GFY LQLG+ +VLP + A W A L++PAF GA +GN L+P +L
Sbjct 22 VITQSGFYRTALQLGNVPIVLPFVVAELHAELWMAALIFPAFTAGAAIGNMLAPAVLAAV 81
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISS 138
+ R L++ T A V A G ++FL G V+ S VA+ D++++
Sbjct 82 PRRRRLVIIVFGLTVLAAVNAMGATMGDGNEAGSLFLVNVLFIGAVSAFSFVAFADLVAA 141
Query 139 MLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGLVC 193
M R ++LLT+ G+ L T + V + + H + + LLW + +GL+C
Sbjct 142 MPSGTDRAQVLLTEAGVGAAL-TAIVTVALSFVPHEDHLTNNIRLLWTATAAMAISGLIC 200
Query 194 SGIAALFVGPMRSVSVTTATRMP-LREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGTT 252
G+ V P+ + P L ++ +G A R + W+RRY+ LLF + LG++
Sbjct 201 LGLPQRIVPPVH--------KAPGLNKVVHVGLAALRRESWYRRYLAVQLLFGSVVLGSS 252
Query 253 FFSLRAAQSNGSLH----VLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAAL 308
F+S+R A G H VLV+ +GLV G +W +I FG+ GL GSA+L+ AAA+
Sbjct 253 FYSIRVAAIPGDEHDNVVVLVLFVCVGLVGGIRVWNRIRERFGLVGLFAGSAILSIAAAV 312
Query 309 LCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAA 368
+ + + G W + A LA++A Q+V A WI+ A R +LI G + +
Sbjct 313 IAIAFQLAGSWPNLVAISLVIALASIANQSVFTAGQLWIAHNADPTLRISLIAFGRLVIS 372
Query 369 VEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLR 407
L LG +AQ H +WPV++VL L V AA ++ R
Sbjct 373 AGLVGLSSLLGILAQFHDVVWPVMIVLLLNVAAAYSAKR 411
>gi|340625284|ref|YP_004743736.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|340003474|emb|CCC42594.1| putative conserved integral membrane protein [Mycobacterium canettii
CIPT 140010059]
Length=436
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/425 (32%), Positives = 211/425 (50%), Gaps = 24/425 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++AQ GFY+A LQLG+ ++VLP + A W A L++PAF G +GN ++P +
Sbjct 22 IIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAV 81
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG--GVVTGVSSVAYTDMI 136
+ RH L +S A L NA G G A L GVV+ +S VA+ D++
Sbjct 82 PR-RHRLFIIVSCLAV-LAGVNALCATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLV 139
Query 137 SSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGL 191
++M R +LLT+ G+ L V + + + ++R LLW + +
Sbjct 140 AAMPSGTARARILLTEVGVGAALTA-VVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAA 198
Query 192 VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGT 251
+C + P R V A L ++ ++G+ R+ W+RRY+ +LF + LG+
Sbjct 199 ICRAL------PHRIVPRVHAAP-GLHKLVYVGWTAIRTNSWYRRYLLVQVLFGSVVLGS 251
Query 252 TFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAA 307
+F S+R A G + +V+ +GL+ G LW ++ FG+ GL +GSAL++ AAA
Sbjct 252 SFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFVGSALVSIAAA 311
Query 308 LLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLA 367
+L + + G W + A G L ++A Q+V A WI+ A R +LI G +
Sbjct 312 VLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVI 371
Query 368 AVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQA 427
+G+ALG IAQ H +WPV++VL L + AA ++ R V PQ + +
Sbjct 372 NAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVRGLPQVS--RT 429
Query 428 YRPAT 432
RP T
Sbjct 430 SRPKT 434
>gi|15839627|ref|NP_334664.1| hypothetical protein MT0260 [Mycobacterium tuberculosis CDC1551]
gi|254233624|ref|ZP_04926950.1| hypothetical protein TBCG_00245 [Mycobacterium tuberculosis C]
gi|13879745|gb|AAK44478.1| hypothetical protein MT0260 [Mycobacterium tuberculosis CDC1551]
gi|124603417|gb|EAY61692.1| hypothetical protein TBCG_00245 [Mycobacterium tuberculosis C]
Length=449
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 133/425 (32%), Positives = 211/425 (50%), Gaps = 24/425 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++AQ GFY+A LQLG+ ++VLP + A W A L++PAF G +GN ++P +
Sbjct 35 IIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAV 94
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG--GVVTGVSSVAYTDMI 136
+ RH L +S A L NA G G A L GVV+ +S VA+ D++
Sbjct 95 PR-RHRLFIIVSCLAV-LAGVNALCATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLV 152
Query 137 SSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGL 191
++M R +LLT+ G+ L V + + + ++R LLW + +
Sbjct 153 AAMPSGTARARILLTEVGVGAALTA-VVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAA 211
Query 192 VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGT 251
+C + P R V A L ++ ++G+ R+ W+RRY+ +LF + LG+
Sbjct 212 ICRAL------PHRIVPRVHAAP-GLHKLVYVGWTAIRTNGWYRRYLLVQVLFGSVVLGS 264
Query 252 TFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAA 307
+F S+R A G + +V+ +GL+ G LW ++ FG+ GL +GSAL++ AAA
Sbjct 265 SFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFVGSALVSIAAA 324
Query 308 LLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLA 367
+L + + G W + A G L ++A Q+V A WI+ A R +LI G +
Sbjct 325 VLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVI 384
Query 368 AVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQA 427
+G+ALG IAQ H +WPV++VL L + AA ++ R V PQ + +
Sbjct 385 NAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVRGLPQVS--RT 442
Query 428 YRPAT 432
RP T
Sbjct 443 SRPKT 447
>gi|15607387|ref|NP_214760.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|121636159|ref|YP_976382.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148660011|ref|YP_001281534.1| putative integral membrane protein [Mycobacterium tuberculosis
H37Ra]
66 more sequence titles
Length=436
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/425 (32%), Positives = 211/425 (50%), Gaps = 24/425 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++AQ GFY+A LQLG+ ++VLP + A W A L++PAF G +GN ++P +
Sbjct 22 IIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAV 81
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG--GVVTGVSSVAYTDMI 136
+ RH L +S A L NA G G A L GVV+ +S VA+ D++
Sbjct 82 PR-RHRLFIIVSCLAV-LAGVNALCATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLV 139
Query 137 SSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGL 191
++M R +LLT+ G+ L V + + + ++R LLW + +
Sbjct 140 AAMPSGTARARILLTEVGVGAALTA-VVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAA 198
Query 192 VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGT 251
+C + P R V A L ++ ++G+ R+ W+RRY+ +LF + LG+
Sbjct 199 ICRAL------PHRIVPRVHAAP-GLHKLVYVGWTAIRTNGWYRRYLLVQVLFGSVVLGS 251
Query 252 TFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAA 307
+F S+R A G + +V+ +GL+ G LW ++ FG+ GL +GSAL++ AAA
Sbjct 252 SFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFVGSALVSIAAA 311
Query 308 LLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLA 367
+L + + G W + A G L ++A Q+V A WI+ A R +LI G +
Sbjct 312 VLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVI 371
Query 368 AVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQA 427
+G+ALG IAQ H +WPV++VL L + AA ++ R V PQ + +
Sbjct 372 NAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVRGLPQVS--RT 429
Query 428 YRPAT 432
RP T
Sbjct 430 SRPKT 434
>gi|289572825|ref|ZP_06453052.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289537256|gb|EFD41834.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=562
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/425 (32%), Positives = 211/425 (50%), Gaps = 24/425 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++AQ GFY+A LQLG+ ++VLP + A W A L++PAF G +GN ++P +
Sbjct 22 IIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAV 81
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG--GVVTGVSSVAYTDMI 136
+ RH L +S A L NA G G A L GVV+ +S VA+ D++
Sbjct 82 PR-RHRLFIIVSCLAV-LAGVNALCATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLV 139
Query 137 SSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGL 191
++M R +LLT+ G+ L V + + + ++R LLW + +
Sbjct 140 AAMPSGTARARILLTEVGVGAALTA-VVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAA 198
Query 192 VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGT 251
+C + P R V A L ++ ++G+ R+ W+RRY+ +LF + LG+
Sbjct 199 ICRAL------PHRIVPRVHAAP-GLHKLVYVGWTAIRTNGWYRRYLLVQVLFGSVVLGS 251
Query 252 TFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAA 307
+F S+R A G + +V+ +GL+ G LW ++ FG+ GL +GSAL++ AAA
Sbjct 252 SFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFVGSALVSIAAA 311
Query 308 LLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLA 367
+L + + G W + A G L ++A Q+V A WI+ A R +LI G +
Sbjct 312 VLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVI 371
Query 368 AVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQA 427
+G+ALG IAQ H +WPV++VL L + AA ++ R V PQ + +
Sbjct 372 NAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSARRFAPAKSVDVRGLPQVS--RT 429
Query 428 YRPAT 432
RP T
Sbjct 430 SRPKT 434
>gi|308394875|ref|ZP_07491835.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308367592|gb|EFP56443.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323717237|gb|EGB26446.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=423
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/425 (32%), Positives = 211/425 (50%), Gaps = 24/425 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++AQ GFY+A LQLG+ ++VLP + A W A L++PAF G +GN ++P +
Sbjct 9 IIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAV 68
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG--GVVTGVSSVAYTDMI 136
+ RH L +S A L NA G G A L GVV+ +S VA+ D++
Sbjct 69 PR-RHRLFIIVSCLAV-LAGVNALCATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLV 126
Query 137 SSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGL 191
++M R +LLT+ G+ L V + + + ++R LLW + +
Sbjct 127 AAMPSGTARARILLTEVGVGAALTA-VVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAA 185
Query 192 VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGT 251
+C + P R V A L ++ ++G+ R+ W+RRY+ +LF + LG+
Sbjct 186 ICRAL------PHRIVPRVHAAP-GLHKLVYVGWTAIRTNGWYRRYLLVQVLFGSVVLGS 238
Query 252 TFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAA 307
+F S+R A G + +V+ +GL+ G LW ++ FG+ GL +GSAL++ AAA
Sbjct 239 SFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFVGSALVSIAAA 298
Query 308 LLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLA 367
+L + + G W + A G L ++A Q+V A WI+ A R +LI G +
Sbjct 299 VLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVI 358
Query 368 AVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQA 427
+G+ALG IAQ H +WPV++VL L + AA ++ R V PQ + +
Sbjct 359 NAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVRGLPQVS--RT 416
Query 428 YRPAT 432
RP T
Sbjct 417 SRPKT 421
>gi|31791424|ref|NP_853917.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|31617009|emb|CAD93116.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
Length=436
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/425 (32%), Positives = 211/425 (50%), Gaps = 24/425 (5%)
Query 20 LVAQGGFYTAGLQLGSGAVVLPVICAH-QGLTWAAGLLYPAFCIGAILGNSLSPLILQRA 78
++AQ GFY+A LQLG+ ++VLP + A W A L++PAF G +GN ++P +
Sbjct 22 IIAQSGFYSAALQLGNVSIVLPFVVAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAV 81
Query 79 GQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAG--GVVTGVSSVAYTDMI 136
+ RH L +S A L NA G G A L GVV+ +S VA+ D++
Sbjct 82 PR-RHRLFIIVSCLAV-LAGVNALCATIGKGSVAGILLVVNVTLIGVVSVISFVAFADLV 139
Query 137 SSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW-----LGAAGL 191
++M R +LLT+ G+ L V + + + ++R LLW + +
Sbjct 140 AAMPSGTARARILLTEVGVGAALTA-VVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAA 198
Query 192 VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGT 251
+C + P R V A L ++ ++G+ R+ W+RRY+ +LF + LG+
Sbjct 199 ICRAL------PHRIVPRVHAAP-GLHKLVYVGWTAIRTNGWYRRYLLVQVLFGSVVLGS 251
Query 252 TFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAA 307
+F S+R A G + +V+ +GL+ G LW ++ FG+ GL +GSAL++ AAA
Sbjct 252 SFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFVGSALVSIAAA 311
Query 308 LLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLA 367
+L + + G W + A G L ++A Q+V A WI+ A R +LI G +
Sbjct 312 VLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRTSLISFGQLVI 371
Query 368 AVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATLQA 427
+G+ALG IAQ H +WPV++VL L + AA ++ R V PQ + +
Sbjct 372 NAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVRGLPQVS--RT 429
Query 428 YRPAT 432
RP T
Sbjct 430 SRPKT 434
>gi|258652575|ref|YP_003201731.1| hypothetical protein Namu_2367 [Nakamurella multipartita DSM
44233]
gi|258555800|gb|ACV78742.1| hypothetical protein Namu_2367 [Nakamurella multipartita DSM
44233]
Length=449
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/386 (30%), Positives = 182/386 (48%), Gaps = 13/386 (3%)
Query 14 RNLFGRLVAQGGFYTAGLQLGSGAVVLPVIC-AHQGLTWAAGLLYPAFCIGAILGNSLSP 72
RN + L+ Q + QL + AVVLP IC A G A +LYP A+LG +P
Sbjct 47 RN-YRALLGQASAVSLANQLTATAVVLPYICIAVGGSPLIAAMLYPIGTFCALLGTLSAP 105
Query 73 LILQRAGQLRHLLMAAISATAAALVVCNA-AVPWTGVGVAAVFLATTGAGGVVTGVSSVA 131
++ R L + AI AAA+ NA G +A VFL TT G + G+++V+
Sbjct 106 VLTARRSNPFILTVGAI--IAAAVTAGNALGSDLLGSPIAVVFLVTTAVLGFLGGLAAVS 163
Query 132 YTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWLGAAGL 191
D++S+ L + G + + Q A + L VT + H + + + LLW+GA
Sbjct 164 AVDLMSTSLLQAQVGRVSVLQTAISATLVLVVTAAELLFFKHTSALQSHIALLWMGAIAF 223
Query 192 VCSGIAALFVGPMRSVSVTTATRMP-LREIYWMGFAIARSQPWFRRYMTTYLLFVPISLG 250
+ L V P + S R P LR++ +G + R W R ++ F+ ++LG
Sbjct 224 AMAIPFVLLVVPAPNPS---RVRGPTLRQVIPLGVSQVREHRWLRTFLLVQTCFISLTLG 280
Query 251 TTFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAA 306
T FFS AA +G+ LH++V ++ GL+V +W + + VRG+ + + L AA
Sbjct 281 TAFFSAHAAALHGNVVGHLHLIVAFTATGLIVYGFVWARTRSIATVRGMHVLAGGLIVAA 340
Query 307 ALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTL 366
AL + A++ W +G LA VA+Q + A W+ R+ I +
Sbjct 341 ALFAIAADTWDLPYEEWLFGVILALAAVASQVISTAKRVWLLRYVGGENRSLTIGFAQLV 400
Query 367 AAVEATVLGVALGGIAQKHATIWPVV 392
++ +T+ + LG +A +WPV
Sbjct 401 TSLASTLTALVLGVVAHLQGVVWPVY 426
>gi|167968968|ref|ZP_02551245.1| hypothetical protein MtubH3_13417 [Mycobacterium tuberculosis
H37Ra]
Length=197
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/195 (34%), Positives = 102/195 (53%), Gaps = 6/195 (3%)
Query 242 LLFVPISLGTTFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLL 297
+LF + LG++F S+R A G + +V+ +GL+ G LW ++ FG+ GL +
Sbjct 3 VLFGSVVLGSSFHSIRVAAVPGDQPDEVVAVVLFVCVGLLGGIALWNRVRERFGLVGLFV 62
Query 298 GSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRA 357
GSAL++ AAA+L + + G W + A G L ++A Q+V A WI+ A R
Sbjct 63 GSALVSIAAAVLSIAFDLAGAWPNVVAIGLVIALVSIANQSVFTAGQLWIARDAEPGLRT 122
Query 358 TLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTAD 417
+LI G + +G+ALG IAQ H +WPV++VL L + AA ++ R V
Sbjct 123 SLISFGQLVINAGLVGMGLALGLIAQDHDAVWPVMIVLLLNLTAAYSATRFAPAKSVDVR 182
Query 418 TSPQAATLQAYRPAT 432
PQ + + RP T
Sbjct 183 GLPQVS--RTSRPKT 195
>gi|313675068|ref|YP_004053064.1| major facilitator superfamily mfs_1 [Marivirga tractuosa DSM
4126]
gi|312941766|gb|ADR20956.1| major facilitator superfamily MFS_1 [Marivirga tractuosa DSM
4126]
Length=432
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/292 (24%), Positives = 129/292 (45%), Gaps = 14/292 (4%)
Query 123 VVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLA--TGVTLVIVPMLAHGNEMARY 180
V +GV+SVAY D+I +P RG++L + G +L+ GV LV G
Sbjct 144 VASGVASVAYKDVIGKTIPKSTRGQMLSYRSTFGGILSLIAGVVLV---FFIQGQADKSI 200
Query 181 HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT 240
+ ++L A+GL + LF T R P E+ G + + + FR ++ T
Sbjct 201 YGFMFLFASGLWFIA-SILFFMIEEEKGATKGGRTPFEEVK-AGIKLIKEEANFRNFLFT 258
Query 241 YLLFVPISLGTTFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLL 296
L + + L F+ L A + + L L+I++ + V+ S W ++ R L+
Sbjct 259 RALLMAVPLLQPFYVLVAKDIDNTSWSLLGYLIIVNGLANVLSSPFWGKVADQSATR-LM 317
Query 297 LGSALLNAAAALLCMVAESCGQW-VHAWAYGTAFLLATVAAQTVVAASISWISVLAPERY 355
S+ + A+ ++ W + +A+ F + +A + +++ AP+
Sbjct 318 RISSFIAIGGAVFALLFYYASDWNLGFYAFLPVFFINGIAYSGARLSRKTYLVDYAPDDN 377
Query 356 RATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLR 407
+AT + V +T + T++ G IAQ ++ ++L V+A V S R
Sbjct 378 KATYVSVANTFIGL-FTLVAAGFGVIAQLFGLPAQIIFFMSLLVLAIVLSFR 428
>gi|91214549|ref|ZP_01251522.1| Permease of the major facilitator superfamily protein [Psychroflexus
torquis ATCC 700755]
gi|91186976|gb|EAS73346.1| Permease of the major facilitator superfamily protein [Psychroflexus
torquis ATCC 700755]
Length=432
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 72/307 (24%), Positives = 134/307 (44%), Gaps = 28/307 (9%)
Query 106 TGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLA--TGV 163
T V A VFL + + +GV SV++ D+ +P RG++L + G LA G
Sbjct 129 TFVSYAIVFLLLLFS--IASGVGSVSFKDVTGKTVPKGERGQMLSYRSTFGGSLALIAGG 186
Query 164 TLVIVPMLAHGNEMARYHDLLWLGAAGLVCSGIAALFVGPMRSV-----SVTTATRMPLR 218
+LV + D WL C+ + +F + S T R PL
Sbjct 187 SLVF---------FLKGEDSKWLYVGLFACAAVLWIFASILFSAIKEQPGSTEGGRTPLE 237
Query 219 EIYWMGFAIARSQPWFRRYMTTYLLFVPISLGTTFFSLRAAQ-SNGS---LHVLVILSSI 274
EI G ++ + +R ++ T L + I L FF L A S G+ L ++++ S+
Sbjct 238 EIK-TGVSLLKKDSSYRNFIITRALLMAIPLLDPFFILLAKDVSKGNWNYLGYIIVIGSL 296
Query 275 GLVVGSMLWRQINRLFGVRGLLLGSAL--LNAAAALLCMVAESCGQWVHAWAYGTAFLLA 332
+V S +W ++ ++ + + ++L L+ AL+ + ++ + ++ + + +
Sbjct 297 AQIVSSPIWGRLADRSSLQLMRISASLSILSILYALVFVYFDN--ETLNFYYFMPVLFIN 354
Query 333 TVAAQTVVAASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVV 392
VA + ++I APE+ R T + V +TL + T++ + G IA+ +
Sbjct 355 GVAYSGARLSRKTYIIDYAPEKERPTYVSVANTLIGL-FTIVAASFGLIAKHFGLAYQFW 413
Query 393 VVLTLAV 399
L L V
Sbjct 414 FFLLLLV 420
>gi|226355650|ref|YP_002785390.1| hypothetical protein Deide_07740 [Deinococcus deserti VCD115]
gi|226317640|gb|ACO45636.1| Conserved hypothetical protein; putative membrane protein [Deinococcus
deserti VCD115]
Length=423
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/289 (25%), Positives = 123/289 (43%), Gaps = 22/289 (7%)
Query 125 TGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLA-HGNEMARYHDL 183
+GVS + + +++S +P RR T+ G +LA G L++ +L G E + L
Sbjct 137 SGVSGLPFLEVVSKTVPPARRPRFFGTRNLYGGLLAFGAGLLVRWILGPSGLEFPYSYAL 196
Query 184 LWLGAAGLVCSGIAALFVG----PMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMT 239
++ G V G P V R R I P FR ++T
Sbjct 197 IF--GLGTVAFTFGYWVFGRIQEPPDPPLVAQGVRGEFRAI-----PETLRDPHFRAFLT 249
Query 240 TYLLFVPISLGTTFFSLRAAQS----NGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGL 295
LL S+ FF+ A + +L + V+ + + +++W+++ G R +
Sbjct 250 VRLLLAGASMSEPFFAANALRELNFPAATLGIFVMALTGAAPLSNVMWQRVAERNGSRRI 309
Query 296 LLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERY 355
+ +++ A L ++ + + AWAY F+L++VAAQ + + +AP
Sbjct 310 IRYASVFYGLAPLAALLVGALD--LGAWAYLWVFVLSSVAAQGFNLGHTNHLLNIAPPEA 367
Query 356 RATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVA 404
R+ I +TL V A + LGG+ A P V L AV+ A+A
Sbjct 368 RSRYIGTLNTL--VGAALFTPVLGGLVADAAGYTP--VFLMSAVLCALA 412
>gi|254510863|ref|ZP_05122930.1| hypothetical protein RKLH11_1398 [Rhodobacteraceae bacterium
KLH11]
gi|221534574|gb|EEE37562.1| hypothetical protein RKLH11_1398 [Rhodobacteraceae bacterium
KLH11]
Length=433
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (25%), Positives = 83/182 (46%), Gaps = 5/182 (2%)
Query 230 SQPWFRRYMTTYLLFVPISLGTTFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQ 285
Q WFRRY+ L V +SL FF+L AA+++ + L ++I S+ G +V + LW+
Sbjct 241 EQAWFRRYLVMRLPLVVVSLSVPFFALIAAEAHHASAKGLTAMIISSASGYLVSAPLWQV 300
Query 286 INRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASIS 345
+N + R +++ L+ A ++ + + A + +VA + +A
Sbjct 301 VN-MKSHRAVMVTGNLMVAVTGIVLLTFHYLQVDHDVHLHAIALFVVSVATTGISSARKL 359
Query 346 WISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVAS 405
+ +AP+ R L + A L AL +A H +V ++ +++ +A A
Sbjct 360 YFLDVAPKEQRIQGAAAIKALCRLSAVGLSAALAAVAHMHEVASAIVFIVLVSIWSAFAC 419
Query 406 LR 407
R
Sbjct 420 YR 421
>gi|260062472|ref|YP_003195552.1| Permease of the major facilitator superfamily protein [Robiginitalea
biformata HTCC2501]
gi|88784037|gb|EAR15207.1| Permease of the major facilitator superfamily protein [Robiginitalea
biformata HTCC2501]
Length=431
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/186 (28%), Positives = 91/186 (49%), Gaps = 12/186 (6%)
Query 123 VVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHD 182
+ +GV+SVAY D++ +P RRG LL T+ G VL LV+ L + +
Sbjct 143 IASGVASVAYKDVMGKTIPKGRRGRLLATRATGGGVLTLAFGLVLFFFL-RDMQASWTVA 201
Query 183 LLWLGAAGL-VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTY 241
LL +GA+ L V +G+A L++ + T R P +E + G+ + R ++ +
Sbjct 202 LLIVGASLLWVLAGLAFLWID--EAAGATEGGRTPFQE-FRAGWKVLRKDRNLVNFILSR 258
Query 242 LLFVPISLGTTFFSLRAAQSNGS----LHVLVILSSIGLVVGSMLWRQI-NRLFGVRGLL 296
+ I L +F + + + L + VI + + ++ S LW ++ +R RGL+
Sbjct 259 AFLMAIPLAQPYFVVIGREYTDADLSGLGLFVIAAGLAALISSPLWGKLADR--SSRGLM 316
Query 297 LGSALL 302
+G ALL
Sbjct 317 VGMALL 322
>gi|88797049|ref|ZP_01112639.1| Permease of the major facilitator superfamily protein [Reinekea
sp. MED297]
gi|88779918|gb|EAR11103.1| Permease of the major facilitator superfamily protein [Reinekea
sp. MED297]
Length=480
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 97/369 (27%), Positives = 148/369 (41%), Gaps = 34/369 (9%)
Query 13 PRNLFGRLVAQGGFYTA-GLQLGSGAVVLPVICAHQGL-TWAAGLLYPAFCIGAILGNSL 70
P N +AQ F T G L S +VLP + G+ + +GLL P G SL
Sbjct 84 PGNFLKIFLAQ--FLTKIGDALTSSRIVLPWLMNGLGIPAFFSGLLVPIRESG-----SL 136
Query 71 SPLIL----QRAGQLRHLLMAA---ISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGV 123
P + RA +R A + ATA AL+V A+ +GV + + +
Sbjct 137 IPQLFIGGWMRAYAIRKWFFVAGCLLQATAVALMVI-IALTLSGVVAGWALIGSLILFSL 195
Query 124 VTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDL 183
G SVA D++ +P RRG L T +A + +T+V + GN + L
Sbjct 196 ARGFCSVASKDVMGKTIPKTRRGRLNGTSASAAGI----ITMVTGAAMIAGNRLTEIPIL 251
Query 184 -LWLGAAGL-VCSGIAALFVGPMRSVSV--TTATRMPLREIYWMGFAIARSQPWFRRYMT 239
L + AAG+ V + I V R + RM L + ++ R FRR++
Sbjct 252 VLLVVAAGIWVLAAIVYAQVNEYRGATDGGRNGGRMALENL-----SLLRDDAQFRRFVL 306
Query 240 TYLLFVPISLGTTFFSLRAAQSNGS---LHVLVILSSIGLVVGSMLWRQINRLFGVRGLL 296
L + L F L+A QS S L + +++S + V+ W + R L+
Sbjct 307 VRSLMMSSGLAAPFVVLQAQQSEHSWLGLGLFILVSGLASVISGRFWGRFADT-SSRRLM 365
Query 297 LGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYR 356
+ +A+L A A L V W F TV Q V A ++I L R
Sbjct 366 IITAVLTALACALSAVLSVWQTDGQVWFALFIFFALTVIHQGVRLARKTYIVDLVSGNRR 425
Query 357 ATLICVGST 365
+ + +T
Sbjct 426 TDYVSLSNT 434
>gi|325283733|ref|YP_004256274.1| major facilitator superfamily MFS_1 [Deinococcus proteolyticus
MRP]
gi|324315542|gb|ADY26657.1| major facilitator superfamily MFS_1 [Deinococcus proteolyticus
MRP]
Length=414
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 75/299 (26%), Positives = 120/299 (41%), Gaps = 39/299 (13%)
Query 113 VFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLA 172
VFL + +GVS + + +++S +P RR T+ G +LA L + +L
Sbjct 117 VFLLAMLVNALASGVSGLPWLEIVSKTVPPQRRAWFFGTRNLYGGLLAFVSGLAVRWILG 176
Query 173 HGNEMARYHDLLWLGAAGLVCSGIAAL---------------FVGPMRSVSVTTAT---R 214
+ L++L +G A F +RS+ + A R
Sbjct 177 SELGFPYNYALIFLLGTVAFTAGYAVFGRVEEPADQPLPPGDFREELRSIPQSLADPSLR 236
Query 215 MPLREIYWMGFAIARSQPWFRRYMTTYLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSI 274
L + FA A S+P++ Y L F SLGT + AA LS++
Sbjct 237 AFLNVRLLLAFA-AVSEPFYAVYALRELDFPAASLGTFVMATTAAAP---------LSNV 286
Query 275 GLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATV 334
G W+ + G R +L +A A A + ++A G W A AYG F+LA+V
Sbjct 287 G-------WQWVAERKGSRRILRYAASFAALAPVTALLAGHFG-WSPA-AYGLVFVLASV 337
Query 335 AAQTVVAASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVV 393
A Q + + + ++PE R+ I +TL V + LGG+ P+ V
Sbjct 338 ALQGFNLGNTNHLLNISPEGQRSRYIGTLNTLVGV--ALFAPVLGGLVADRYGYQPLFV 394
>gi|220933679|ref|YP_002512578.1| major facilitator transporter [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219994989|gb|ACL71591.1| major facilitator transporter [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length=442
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 62/254 (25%), Positives = 113/254 (45%), Gaps = 24/254 (9%)
Query 126 GVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVI---VPMLAHGNEMARYHD 182
GVSSVA D++ + RRG ++ + LA VTL + V + A + +
Sbjct 154 GVSSVASKDVLGKTIAKTRRGTVM----GYAAALAGFVTLGVGGWVSLRAESADSVGFFT 209
Query 183 LLWLGAAGLVCSGIAALFVGPMRSVSVT----TATRMPLREIYWMGFAIARSQPWFRRYM 238
LL + AAGL+ +F T A LR + M ++ P FR ++
Sbjct 210 LLLI-AAGLMWFAAGGIFAAVKEEPGATEGGGNAVSEALRSLGLM-----KTDPLFRHFV 263
Query 239 TTYLLFVPISLGTTFFSLRAAQ----SNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRG 294
T L + +L F+ + A Q S GSL +++I + + + + +W +++ R
Sbjct 264 ITRALLMSTALAMPFYVILAQQQTGGSLGSLGLMIIATGLAGGLSAPVWGRLSDR-SSRL 322
Query 295 LLLGSALLNAAAALLCM-VAESCGQWVHA-WAYGTAFLLATVAAQTVVAASISWISVLAP 352
+L+ S ++ A LL ++ G W + + + FL+ +A V +++ +A
Sbjct 323 VLVASGVVAGALGLLTFGLSGIEGAWAKSEFLFAALFLVIGIAHSGVRLGRKTYLVDMAT 382
Query 353 ERYRATLICVGSTL 366
+ RA + V +TL
Sbjct 383 QDNRAAYVAVSNTL 396
>gi|121611865|ref|YP_999672.1| major facilitator transporter [Verminephrobacter eiseniae EF01-2]
gi|121556505|gb|ABM60654.1| major facilitator superfamily MFS_1 [Verminephrobacter eiseniae
EF01-2]
Length=440
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 85/343 (25%), Positives = 144/343 (42%), Gaps = 24/343 (6%)
Query 13 PRNLFGRLVAQGGFYTAGLQLGSGAVVLP-VICAHQGLTWAAGLLYPAFCIGAILGNSLS 71
PRN F +A G G +L S +P I G A GL A +G L +
Sbjct 32 PRN-FAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQFLGMTLSSIWG 90
Query 72 PLILQRAGQLRHLLMAA-----ISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTG 126
+++ Q+ ++ A + AL + W +G A VFLA G G G
Sbjct 91 ATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWA-LGAACVFLALFGFFG---G 146
Query 127 VSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWL 186
V V + ++S ++P +RG L + G + A+GV + L N + ++
Sbjct 147 VQGVTFNVLMSKVIPVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFM 206
Query 187 GAAGLVCSGIAAL-FVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFV 245
A L GI+AL FV +S++V + ++ + + + R+ P +RR+ L
Sbjct 207 LAFILTSIGISALAFVREPKSLTVRASPSRFMQRLADVP-GLLRADPHYRRFFFARAL-- 263
Query 246 PISLGTT---FFSLRAAQ----SNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLG 298
+LGT+ F+ L A Q S +L + + ++ ++ W +I G R + +
Sbjct 264 -AALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVFIL 322
Query 299 SALLNAAAALLCMVAESCGQWVHAW-AYGTAFLLATVAAQTVV 340
+ A LL ++ S ++ A+ G F VAAQ V
Sbjct 323 GVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFV 365
>gi|227504119|ref|ZP_03934168.1| permease of the major facilitator family protein [Corynebacterium
striatum ATCC 6940]
gi|227199286|gb|EEI79334.1| permease of the major facilitator family protein [Corynebacterium
striatum ATCC 6940]
Length=407
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 91/353 (26%), Positives = 153/353 (44%), Gaps = 31/353 (8%)
Query 30 GLQLGSGAVVLPVICAHQGL-TWAAGLLYPAFCIGAILGNS-LSPLILQRAGQLRHLLMA 87
G QL SG VLP + A G+ + LL P G++L + LSP + R + + +
Sbjct 24 GDQLVSGKTVLPWLFAQVGVPHFFTALLVPIRESGSMLPQAALSPWVTSRPARKKLWVWG 83
Query 88 AISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGE 147
++ A+VV AA + G + V +A V + S+ D+ + RGE
Sbjct 84 SLIQGCCAVVVAVAAALFHGWLLGVVTIAALAVLSVFRALCSLTGKDVQGRTISKGSRGE 143
Query 148 LLLTQGAAGSVLATG-VTLVIVPMLAHGNEMARYHDLLWLGAAGLVCSGIAALFVGP--M 204
+ G A ATG VTL+I +LA ++ LG A ++ G A+ F+
Sbjct 144 V---TGLAAQ--ATGAVTLLIGLVLAALGQLPP------LGLAAVLGCGAASWFIAAAVF 192
Query 205 RSVS--VTTATRMPLREIYWMG-FAIARSQPWFRRYMTTYLLFVPISLGTTFFSLRAAQS 261
++ V + P + +W + + FRR++ L + +L TTF + Q+
Sbjct 193 HAIDEPVPDNAQDPSKSHWWRDTWGLYTEDADFRRFVNVRALLLVTALSTTFIVTLSHQA 252
Query 262 NGS----LHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCG 317
+ L V+ SS+ +VG +I+ ++ R L A +AAA+L + +C
Sbjct 253 GTTAFSGLGGFVLASSLASLVGG----KISGIWSDRSSRLVMAWASAAASLTLLAVVACA 308
Query 318 Q----WVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTL 366
Q WV AWA F L +A + A ++I +A R + +T+
Sbjct 309 QWAPHWVTAWALPLGFFLVNLAHTAIRVARKTYIVDMAGGDKRTFYVGAANTM 361
>gi|254445519|ref|ZP_05058995.1| hypothetical protein VDG1235_3765 [Verrucomicrobiae bacterium
DG1235]
gi|198259827|gb|EDY84135.1| hypothetical protein VDG1235_3765 [Verrucomicrobiae bacterium
DG1235]
Length=442
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 99/414 (24%), Positives = 158/414 (39%), Gaps = 42/414 (10%)
Query 13 PRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWA----------AGLLYPAFCI 62
PRN F L A A +L S +VLP + + G AG+L P I
Sbjct 41 PRNYFAYLAANVLSKIAD-ELSSARLVLPWLFSAMGAPLGLIGYIVPLREAGVLIPQLAI 99
Query 63 GAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGG 122
A L +R Q ++ +A + + AL+ P G VA T G
Sbjct 100 AAYL---------RRLAQRKYAWLAGAALSGIALLAVGILSPTLGKQVAGY--TTLGLLL 148
Query 123 VVT---GVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMAR 179
V + GV SVA D+I + RRG L+ S + L I A E
Sbjct 149 VYSMGRGVCSVAAKDVIGKTVSKKRRGALMGYSAGISSAAILCIGLGI--SFAQNQEANN 206
Query 180 YHDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMT 239
L + AAG + A F T R + W A+ ++ P FR Y+
Sbjct 207 KLPFLLILAAGALWFASLACFQAIKEEAGSTEGGRSAWDAV-WENLALLKTDPVFRHYLL 265
Query 240 TYLLFVPISLGTTFFSLRAAQSN---GSLHVLVILSSIGLVVGSMLW----RQINRLFGV 292
L + ++L F++L A Q + G L L+I + + W + +RL
Sbjct 266 ARGLLLSVALAPPFYALMAQQRSENAGDLGWLIIAGGLAGTISGPFWGKASDRSSRLTMA 325
Query 293 RGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAP 352
L+ + LL + + + S G +W Y F + +++ V
Sbjct 326 FAALM-AGLLGIGIGVFDLFSTS-GWTSQSWIYAALFFTVNLFYGGARLGRKAYL-VDMT 382
Query 353 ERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASL 406
++ + +G+TL + VLG +LG +A +I P + +L V++ + SL
Sbjct 383 SGDKSGYVAIGNTLTGIALLVLG-SLGFLAD---SIGPSGAIASLGVLSLIGSL 432
>gi|110835436|ref|YP_694295.1| hypothetical protein ABO_2575 [Alcanivorax borkumensis SK2]
gi|110648547|emb|CAL18023.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length=433
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 75/308 (25%), Positives = 122/308 (40%), Gaps = 59/308 (19%)
Query 126 GVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLW 185
G SVA D+ +P RRG L L +TL++ ++ ++ +
Sbjct 149 GFCSVAMKDVQGKCVPKSRRGRLTGLSATLSGALTFALTLLV---FSNDSDPSMLFYTAL 205
Query 186 LGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFV 245
L AG+ A +F+ + LRE W ++ ++ FRR++ T L +
Sbjct 206 LAGAGVAWLAAALVFLRVDEYPGASEGGSNALRE-AWSSLSLLKTDVPFRRFVVTRALLM 264
Query 246 PISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSM-------------LWRQI----NR 288
SL + F L A Q SS+GL++GS +W + +R
Sbjct 265 ASSLASPFLVLLAKQQ----------SSLGLLLGSFVLASSLASAVSATVWGYMADSSSR 314
Query 289 LFGVRGLLLGSALLNAAAALLCMVAESCG------QWVHAWAYGTAFLLATVAAQTVVAA 342
+RG A AAL+CMVA VH W Y AF + +A V
Sbjct 315 TVMIRG--------GALAALVCMVAGGVSVSGVEVDGVH-WLYPVAFFVLAIAHAGVRIG 365
Query 343 SISWISVLAPERYRATLICVGSTLAAVEATVLGVAL---GGIAQKHATI---WPVVVVLT 396
+++ +A R + AV +V+GV L GGI+ A + W ++V+
Sbjct 366 RKTYMVDMAGGTKR-------TDYTAVSNSVIGVLLLVVGGISAAVALLGNDWALLVLGG 418
Query 397 LAVIAAVA 404
+ V+ V+
Sbjct 419 MGVMGVVS 426
>gi|344233483|gb|EGV65355.1| general substrate transporter [Candida tenuis ATCC 10573]
Length=534
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/135 (28%), Positives = 64/135 (48%), Gaps = 18/135 (13%)
Query 237 YMTTYLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLL 296
Y T Y+ +S+GT + ++G + +S+G ++G+++ + G R +L
Sbjct 61 YDTGYISGALVSIGTDLSNKHL--TDGEQEFITGATSLGALLGAVVGGVLANFLGRRMVL 118
Query 297 LGSALLNAAAALLCMVAES-----CGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLA 351
LGS ++ A++ + A++ G++V W G A L+A + IS LA
Sbjct 119 LGSNVIFVVGAIIQLAAKTVWTMIVGRFVLGWGVGIASLIAPLM-----------ISELA 167
Query 352 PERYRATLICVGSTL 366
P RYR LI S L
Sbjct 168 PSRYRGRLIVTNSML 182
>gi|256392853|ref|YP_003114417.1| major facilitator superfamily MFS_1 [Catenulispora acidiphila
DSM 44928]
gi|256359079|gb|ACU72576.1| major facilitator superfamily MFS_1 [Catenulispora acidiphila
DSM 44928]
Length=452
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/168 (31%), Positives = 71/168 (43%), Gaps = 22/168 (13%)
Query 230 SQPWFRRYM-------TTYLLFVPISLGTTFFSLRAAQSNGSLH-------VLVILSSIG 275
+ PW+RR YL G F L A H VL+ + S G
Sbjct 2 TGPWYRRLRELPLALRVLYLAMFVNRAGMFVFPLLAVYLVKGKHLGADQAGVLLSVGSTG 61
Query 276 LVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVA 335
L+VGS+L + +G R L+G+ LLNAA L VA+ G W++ A L A +
Sbjct 62 LLVGSLLAGPLCLRWGCRWTLVGALLLNAAGYLGLAVADG-GPWIY-----PAILFAALV 115
Query 336 AQTVVA-ASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIA 382
V AS + I+ LAP RA + + V G LGG+A
Sbjct 116 GMGVFGPASNTLIADLAPPEQRAYAFTLSYMFNNLGMGV-GPLLGGVA 162
>gi|335424027|ref|ZP_08553044.1| major facilitator transporter [Salinisphaera shabanensis E1L3A]
gi|334890457|gb|EGM28724.1| major facilitator transporter [Salinisphaera shabanensis E1L3A]
Length=444
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 64/251 (26%), Positives = 106/251 (43%), Gaps = 20/251 (7%)
Query 126 GVSSVAYTDMISSMLPAVRRGEL--LLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDL 183
GV SV+Y D+ + RRG L A G +A G+ L + P+ G+ A L
Sbjct 157 GVCSVSYKDVQGKTIAKTRRGTLSGYAASAAGGVAMALGLLLWLTPI---GD--ATLTPL 211
Query 184 LWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLL 243
L L A AA+ +R + T + W + RS+P F R++ L
Sbjct 212 LVLLAIAGAAWLFAAITFSSLREYAGATEGGGNALKTAWQSLGLIRSKPGFARFIGVRGL 271
Query 244 FVPISLGTTFFSLRAAQSNG----SLHVLVILSSIGLVVGSMLW-----RQINRLFGVRG 294
V +L +++ A S G +L +L+ LS + +V + W R ++ + G
Sbjct 272 LVATALAAPYYATLARDSGGEAIANLAILLALSGLASLVSAPFWGKFSDRSSRQVLILTG 331
Query 295 LLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPER 354
++ G L AA + ++ G W A Y F+LA + A + ++++ L
Sbjct 332 IVAGLLNLVVAACAWFDLGDTLGVWPFAAGY---FVLAGLHAGVRLGRK-TYLTDLGNND 387
Query 355 YRATLICVGST 365
RA L V +T
Sbjct 388 DRAQLTAVANT 398
>gi|85705176|ref|ZP_01036276.1| hypothetical protein ROS217_04675 [Roseovarius sp. 217]
gi|85670498|gb|EAQ25359.1| hypothetical protein ROS217_04675 [Roseovarius sp. 217]
Length=416
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/142 (29%), Positives = 63/142 (45%), Gaps = 12/142 (8%)
Query 129 SVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYHDLLWLGA 188
SV+Y D++ + RRG + G AGS+ A GV + V ML + R + +GA
Sbjct 139 SVSYKDILGKTVAQTRRGGV---TGLAGSLSAAGVLVFAVLML---TGVLRSQAAV-IGA 191
Query 189 AGL--VCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTYLLFVP 246
L +C G+AAL + + T T + + Y I R RR++ L V
Sbjct 192 VALAGLCWGLAALVLAGLSEERSTPETVEGIGQRY---LKILREDANLRRFVLVRGLLVS 248
Query 247 ISLGTTFFSLRAAQSNGSLHVL 268
+L + + AQ G+L L
Sbjct 249 AALAPPYMVMLTAQDGGALGTL 270
Lambda K H
0.324 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1113865195328
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40