BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2219
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609356|ref|NP_216735.1| transmembrane protein [Mycobacteriu... 494 4e-138
gi|253798716|ref|YP_003031717.1| hypothetical protein TBMG_01762... 493 1e-137
gi|31793398|ref|NP_855891.1| transmembrane protein [Mycobacteriu... 492 2e-137
gi|254820909|ref|ZP_05225910.1| integral membrane protein [Mycob... 405 2e-111
gi|296166096|ref|ZP_06848541.1| integral membrane protein [Mycob... 401 4e-110
gi|120404554|ref|YP_954383.1| hypothetical protein Mvan_3583 [My... 397 8e-109
gi|342857224|ref|ZP_08713880.1| hypothetical protein MCOL_00060 ... 397 1e-108
gi|108800283|ref|YP_640480.1| hypothetical protein Mmcs_3317 [My... 394 6e-108
gi|118617034|ref|YP_905366.1| transmembrane protein [Mycobacteri... 393 1e-107
gi|315443864|ref|YP_004076743.1| hypothetical protein Mspyr1_226... 382 3e-104
gi|118463804|ref|YP_881473.1| integral membrane protein [Mycobac... 382 4e-104
gi|145223518|ref|YP_001134196.1| hypothetical protein Mflv_2931 ... 381 5e-104
gi|118470886|ref|YP_888564.1| integral membrane protein [Mycobac... 378 4e-103
gi|15827382|ref|NP_301645.1| hypothetical protein ML0857 [Mycoba... 376 2e-102
gi|41408058|ref|NP_960894.1| hypothetical protein MAP1960 [Mycob... 370 8e-101
gi|333990324|ref|YP_004522938.1| transmembrane protein [Mycobact... 368 4e-100
gi|240168289|ref|ZP_04746948.1| hypothetical protein MkanA1_0319... 363 2e-98
gi|169629028|ref|YP_001702677.1| hypothetical protein MAB_1940c ... 313 2e-83
gi|331698338|ref|YP_004334577.1| hypothetical protein Psed_4572 ... 300 1e-79
gi|343924147|ref|ZP_08763710.1| hypothetical protein GOALK_002_0... 287 8e-76
gi|54023637|ref|YP_117879.1| hypothetical protein nfa16690 [Noca... 286 2e-75
gi|302524540|ref|ZP_07276882.1| transmembrane protein [Streptomy... 284 9e-75
gi|262202970|ref|YP_003274178.1| hypothetical protein Gbro_3078 ... 283 1e-74
gi|324997511|ref|ZP_08118623.1| hypothetical protein PseP1_02041... 283 1e-74
gi|312140209|ref|YP_004007545.1| integral membrane protein [Rhod... 281 5e-74
gi|226307108|ref|YP_002767068.1| hypothetical protein RER_36210 ... 280 1e-73
gi|326382495|ref|ZP_08204186.1| hypothetical protein SCNU_06135 ... 280 1e-73
gi|226360296|ref|YP_002778074.1| hypothetical protein ROP_08820 ... 279 2e-73
gi|111018168|ref|YP_701140.1| hypothetical protein RHA1_ro01155 ... 279 3e-73
gi|257054813|ref|YP_003132645.1| hypothetical protein Svir_07520... 277 1e-72
gi|317507999|ref|ZP_07965690.1| integral membrane protein [Segni... 273 1e-71
gi|296139232|ref|YP_003646475.1| hypothetical protein Tpau_1512 ... 269 2e-70
gi|333918929|ref|YP_004492510.1| integral membrane protein [Amyc... 267 1e-69
gi|134098208|ref|YP_001103869.1| hypothetical protein SACE_1625 ... 265 4e-69
gi|300783158|ref|YP_003763449.1| hypothetical protein AMED_1232 ... 255 5e-66
gi|258652140|ref|YP_003201296.1| hypothetical protein Namu_1918 ... 242 3e-62
gi|296394634|ref|YP_003659518.1| integral membrane protein [Segn... 239 4e-61
gi|256375073|ref|YP_003098733.1| hypothetical protein Amir_0927 ... 238 4e-61
gi|319949777|ref|ZP_08023802.1| hypothetical protein ES5_09887 [... 233 2e-59
gi|237785296|ref|YP_002906001.1| hypothetical protein ckrop_0697... 221 7e-56
gi|340794086|ref|YP_004759549.1| hypothetical protein CVAR_1120 ... 204 9e-51
gi|172040930|ref|YP_001800644.1| hypothetical protein cur_1250 [... 198 5e-49
gi|227488480|ref|ZP_03918796.1| integral membrane protein [Coryn... 198 6e-49
gi|344044879|gb|EGV40554.1| hypothetical protein CgS9114_08221 [... 197 1e-48
gi|19553411|ref|NP_601413.1| hypothetical protein NCgl2129 [Cory... 196 3e-48
gi|284991790|ref|YP_003410344.1| hypothetical protein Gobs_3371 ... 194 1e-47
gi|145296171|ref|YP_001138992.1| hypothetical protein cgR_2090 [... 192 6e-47
gi|300858862|ref|YP_003783845.1| hypothetical protein cpfrc_0144... 191 9e-47
gi|302206569|gb|ADL10911.1| Hypothetical protein CpC231_1441 [Co... 191 9e-47
gi|38234217|ref|NP_939984.1| hypothetical protein DIP1642 [Coryn... 191 9e-47
>gi|15609356|ref|NP_216735.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|15841710|ref|NP_336747.1| hypothetical protein MT2276 [Mycobacterium tuberculosis CDC1551]
gi|148662036|ref|YP_001283559.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
66 more sequence titles
Length=250
Score = 494 bits (1273), Expect = 4e-138, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA
Sbjct 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI
Sbjct 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM
Sbjct 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
Query 241 RSVQRTVRRK 250
RSVQRTVRRK
Sbjct 241 RSVQRTVRRK 250
>gi|253798716|ref|YP_003031717.1| hypothetical protein TBMG_01762 [Mycobacterium tuberculosis KZN
1435]
gi|289553994|ref|ZP_06443204.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|297634808|ref|ZP_06952588.1| hypothetical protein MtubK4_11826 [Mycobacterium tuberculosis
KZN 4207]
gi|297731799|ref|ZP_06960917.1| hypothetical protein MtubKR_11948 [Mycobacterium tuberculosis
KZN R506]
gi|313659133|ref|ZP_07816013.1| hypothetical protein MtubKV_11958 [Mycobacterium tuberculosis
KZN V2475]
gi|253320219|gb|ACT24822.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289438626|gb|EFD21119.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|328458479|gb|AEB03902.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
Length=250
Score = 493 bits (1268), Expect = 1e-137, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 249/250 (99%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA
Sbjct 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVGVWAGGFTMFTMIPLGVLLGALV FVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGVWAGGFTMFTMIPLGVLLGALVTFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI
Sbjct 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM
Sbjct 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
Query 241 RSVQRTVRRK 250
RSVQRTVRRK
Sbjct 241 RSVQRTVRRK 250
>gi|31793398|ref|NP_855891.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121638100|ref|YP_978324.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990594|ref|YP_002645281.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31618990|emb|CAD97095.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121493748|emb|CAL72223.1| Probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224773707|dbj|BAH26513.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602138|emb|CCC64812.1| probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=250
Score = 492 bits (1266), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 249/250 (99%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA
Sbjct 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVGVWAGGFTM TMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGVWAGGFTMLTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI
Sbjct 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM
Sbjct 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
Query 241 RSVQRTVRRK 250
RSVQRTVRRK
Sbjct 241 RSVQRTVRRK 250
>gi|254820909|ref|ZP_05225910.1| integral membrane protein [Mycobacterium intracellulare ATCC
13950]
Length=250
Score = 405 bits (1042), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 216/250 (87%), Positives = 234/250 (94%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK R AAE+KAA+AQA AARKAAAR+RR QLWQAF LQR+EDKRLLPYMIGAF+LIVG
Sbjct 1 MAKSRTAAENKAARAQAQAARKAAARERRTQLWQAFNLQRQEDKRLLPYMIGAFVLIVGV 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVG+WAGG TM T+IPLGV+LGALVAF++FGRRAQ++VYRKAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGLWAGGLTMITLIPLGVVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+LDAVHRVIGRPGVI VGEGSA RV+PLLAQEKKRTARL+GDVPIYDI
Sbjct 121 KWRVTPGVAATGHLDAVHRVIGRPGVILVGEGSATRVRPLLAQEKKRTARLIGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNG+ EVPLAKLERHLTRLPANITVKQMDT+ESRLAALG+RAGA VMPKGPLP KM
Sbjct 181 IVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGTRAGAAVMPKGPLPNAGKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 241 RGVQRTVRRK 250
>gi|296166096|ref|ZP_06848541.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898505|gb|EFG78066.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=250
Score = 401 bits (1031), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 212/250 (85%), Positives = 233/250 (94%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAKPR AAE+KAA+AQA AARKAAA++RRAQLWQAF LQR+EDKRLLPYMIGAF+LIV A
Sbjct 1 MAKPRTAAENKAARAQAQAARKAAAKERRAQLWQAFNLQRREDKRLLPYMIGAFVLIVAA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVGVWAGG TM T+IPLGV+LGAL AF++FGRRAQ+++Y KAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGVWAGGLTMITLIPLGVVLGALAAFIVFGRRAQKSIYSKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+LDAVHRVIGRPGVI VGEGS+ARV+PLLAQEKKRTARL+GDVPIYD
Sbjct 121 KWRVTPGVAATGHLDAVHRVIGRPGVILVGEGSSARVRPLLAQEKKRTARLIGDVPIYDF 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
+VGNGD EVPLAKLERHL RLPANITVKQMDT+ESRLAALG+RAGA V+PKGPLP KM
Sbjct 181 VVGNGDDEVPLAKLERHLNRLPANITVKQMDTLESRLAALGTRAGAAVLPKGPLPNAGKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 241 RGVQRTVRRK 250
>gi|120404554|ref|YP_954383.1| hypothetical protein Mvan_3583 [Mycobacterium vanbaalenii PYR-1]
gi|119957372|gb|ABM14377.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=250
Score = 397 bits (1020), Expect = 8e-109, Method: Compositional matrix adjust.
Identities = 205/250 (82%), Positives = 232/250 (93%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK RN AE+KAAKA+A AARKAA++QRR+QLWQAF +QRKEDKRLLPYMIGAF+LIV A
Sbjct 1 MAKSRNPAETKAAKAEAKAARKAASKQRRSQLWQAFQMQRKEDKRLLPYMIGAFVLIVAA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SV VG++AGGFTMF +IPLG++LGALVAF+IFGRRAQ++VYRKAEGQTGAAAWALDN+RG
Sbjct 61 SVAVGLYAGGFTMFMLIPLGIVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNMRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+ DAVHRVIGRPGVIFV EGS RVKPLLAQEKKRTARLVGDVPIYD+
Sbjct 121 KWRVTPGVAATGHFDAVHRVIGRPGVIFVAEGSPTRVKPLLAQEKKRTARLVGDVPIYDV 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
I+GNG+GEVPLAKLERHLT+LPANITVKQMD++ESRLAALG++ G MPKGPLP AKM
Sbjct 181 IIGNGEGEVPLAKLERHLTKLPANITVKQMDSLESRLAALGTKVGPAAMPKGPLPAQAKM 240
Query 241 RSVQRTVRRK 250
R +QRTVRR+
Sbjct 241 RGIQRTVRRR 250
>gi|342857224|ref|ZP_08713880.1| hypothetical protein MCOL_00060 [Mycobacterium colombiense CECT
3035]
gi|342134557|gb|EGT87723.1| hypothetical protein MCOL_00060 [Mycobacterium colombiense CECT
3035]
Length=250
Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 208/250 (84%), Positives = 232/250 (93%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK R AA++KAA+A+A AARKAAAR+RR QLWQAF +QR+EDKRLLPYMIGAF+LIVG
Sbjct 1 MAKSRTAAQNKAARAEAQAARKAAARERRTQLWQAFNIQRQEDKRLLPYMIGAFVLIVGI 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVG+WAGG TM T+IPLGV+LG LVAF++FGRRAQ++VY KAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGIWAGGLTMITLIPLGVVLGGLVAFIVFGRRAQKSVYSKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+ DAVHRVIGRPGVI VGEG+A+RV+PLLAQEKKRTARL+GDVPIYDI
Sbjct 121 KWRVTPGVAATGHFDAVHRVIGRPGVILVGEGAASRVRPLLAQEKKRTARLIGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
+VGNG+ EV LAKLERHLTRLPANITVKQMDT+ESRLAALGSRAGA VMPKGPLP + KM
Sbjct 181 VVGNGEDEVSLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNSGKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 241 RGVQRTVRRK 250
>gi|108800283|ref|YP_640480.1| hypothetical protein Mmcs_3317 [Mycobacterium sp. MCS]
gi|119869411|ref|YP_939363.1| hypothetical protein Mkms_3379 [Mycobacterium sp. KMS]
gi|126435906|ref|YP_001071597.1| hypothetical protein Mjls_3328 [Mycobacterium sp. JLS]
gi|108770702|gb|ABG09424.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695500|gb|ABL92573.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126235706|gb|ABN99106.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=250
Score = 394 bits (1012), Expect = 6e-108, Method: Compositional matrix adjust.
Identities = 203/250 (82%), Positives = 231/250 (93%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK RN A +KAAKA+A AARKAA++QRR+QLWQAF +QRKEDKRLLPYMIGAF+LIVGA
Sbjct 1 MAKTRNTAATKAAKAEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
+V VGV AGGFTM+T+IPLG++LGALVAF+IFGRRAQ++VYRKAEGQTGAAAWALDNLRG
Sbjct 61 AVAVGVLAGGFTMYTLIPLGIVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+ DAVHRVIGRPGVIFVGEG+ RVKPLLAQEKKRTARL+GD PIYD+
Sbjct 121 KWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGNPGRVKPLLAQEKKRTARLIGDTPIYDV 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNG+GEVPL+KLERHL +LPANITVKQMD++ESRLAALG++ G MPKGP+P AKM
Sbjct 181 IVGNGEGEVPLSKLERHLNKLPANITVKQMDSLESRLAALGTKLGPAAMPKGPMPAQAKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRR+
Sbjct 241 RGVQRTVRRR 250
>gi|118617034|ref|YP_905366.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|183983277|ref|YP_001851568.1| transmembrane protein [Mycobacterium marinum M]
gi|118569144|gb|ABL03895.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
gi|183176603|gb|ACC41713.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=250
Score = 393 bits (1010), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 211/250 (85%), Positives = 231/250 (93%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MA+ RN+AE+KAAKA+A AARKAAAR+RR QLWQAF LQRKEDKRLLPYMIGAF+LIVG
Sbjct 1 MARSRNSAENKAAKAEAKAARKAAARERRTQLWQAFNLQRKEDKRLLPYMIGAFVLIVGI 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SV VGVWAGG TM TMIP G+LLG LVAF+IFGRRAQR VY KAEGQTGAAAWAL+NLRG
Sbjct 61 SVAVGVWAGGLTMITMIPFGLLLGGLVAFIIFGRRAQRAVYSKAEGQTGAAAWALENLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRV+PGVAATG+ DAVHRV+GRPGVI VGEGSAARVKPLLAQEKKRTARLVG+VPIYDI
Sbjct 121 KWRVSPGVAATGHFDAVHRVLGRPGVILVGEGSAARVKPLLAQEKKRTARLVGEVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNGDGE+PLAKLERHLTRLPANITVKQ+D++ESRLAALGSRAGAG +PKGPLP KM
Sbjct 181 IVGNGDGEIPLAKLERHLTRLPANITVKQLDSLESRLAALGSRAGAGALPKGPLPNAGKM 240
Query 241 RSVQRTVRRK 250
R VQR+VRR+
Sbjct 241 RGVQRSVRRR 250
>gi|315443864|ref|YP_004076743.1| hypothetical protein Mspyr1_22630 [Mycobacterium sp. Spyr1]
gi|315262167|gb|ADT98908.1| hypothetical protein Mspyr1_22630 [Mycobacterium sp. Spyr1]
Length=254
Score = 382 bits (980), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 181/224 (81%), Positives = 206/224 (92%), Gaps = 0/224 (0%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
QRR+QLWQAF +QRKEDKRLLPYMIGAF+LIVG SV G++AGGFT + +IPLG++LGAL
Sbjct 31 QRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGLSVVGGIYAGGFTTYMLIPLGIVLGAL 90
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
VAF+IFGRRAQ++VY+KAEGQTGAAAWALDN+RGKWRVTPGVAATG+ DAVHRVIGRPGV
Sbjct 91 VAFIIFGRRAQKSVYKKAEGQTGAAAWALDNMRGKWRVTPGVAATGHFDAVHRVIGRPGV 150
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
IFVGEG+A RVKPLLAQEKKRTARL+GD PIYDII+GNG+GEVPL+KLERHL +LPANIT
Sbjct 151 IFVGEGAANRVKPLLAQEKKRTARLIGDTPIYDIIIGNGEGEVPLSKLERHLNKLPANIT 210
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
VKQ+D +ESRLAALGS+ G MPKGPLP AKMR VQRTVRR+
Sbjct 211 VKQLDALESRLAALGSKIGPAAMPKGPLPAQAKMRGVQRTVRRR 254
>gi|118463804|ref|YP_881473.1| integral membrane protein [Mycobacterium avium 104]
gi|254774940|ref|ZP_05216456.1| hypothetical protein MaviaA2_09749 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165091|gb|ABK65988.1| integral membrane protein [Mycobacterium avium 104]
Length=250
Score = 382 bits (980), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 213/250 (86%), Positives = 232/250 (93%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK R+AA++KAA+AQA AARKAAAR+RRAQLWQAF +QR+EDKRLLPYMIGAFLL+VG
Sbjct 1 MAKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGV 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SV VGVWAGG TM T+IP GV+LGALVAF++FGRRAQ++VYRKAEGQTGAAAWALDNLRG
Sbjct 61 SVAVGVWAGGLTMITLIPFGVVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+ DAVHRVIGRPGVI VGEGS RV+PLLAQEKKRTARL+GDVPIYDI
Sbjct 121 KWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPLLAQEKKRTARLIGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNG+ EVPLAKLERHLTRLPANITVKQMDT+ESRLAALGSRAGA VMPKGPLP KM
Sbjct 181 IVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 241 RGVQRTVRRK 250
>gi|145223518|ref|YP_001134196.1| hypothetical protein Mflv_2931 [Mycobacterium gilvum PYR-GCK]
gi|145216004|gb|ABP45408.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=243
Score = 381 bits (979), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 181/224 (81%), Positives = 206/224 (92%), Gaps = 0/224 (0%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
QRR+QLWQAF +QRKEDKRLLPYMIGAF+LIVG SV G++AGGFT + +IPLG++LGAL
Sbjct 20 QRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGLSVVGGIYAGGFTTYMLIPLGIVLGAL 79
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
VAF+IFGRRAQ++VY+KAEGQTGAAAWALDN+RGKWRVTPGVAATG+ DAVHRVIGRPGV
Sbjct 80 VAFIIFGRRAQKSVYKKAEGQTGAAAWALDNMRGKWRVTPGVAATGHFDAVHRVIGRPGV 139
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
IFVGEG+A RVKPLLAQEKKRTARL+GD PIYDII+GNG+GEVPL+KLERHL +LPANIT
Sbjct 140 IFVGEGAANRVKPLLAQEKKRTARLIGDTPIYDIIIGNGEGEVPLSKLERHLNKLPANIT 199
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
VKQ+D +ESRLAALGS+ G MPKGPLP AKMR VQRTVRR+
Sbjct 200 VKQLDALESRLAALGSKIGPAAMPKGPLPAQAKMRGVQRTVRRR 243
>gi|118470886|ref|YP_888564.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118172173|gb|ABK73069.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=250
Score = 378 bits (971), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 198/250 (80%), Positives = 222/250 (89%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK RN AE+KAAKA A AARK A++QRR+QLWQAF +QRKEDKRL+PYM GAF+LIV
Sbjct 1 MAKTRNTAETKAAKAAAKAARKEASKQRRSQLWQAFQIQRKEDKRLVPYMAGAFVLIVAI 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
+V G+ GGFT FT+IPLGV+LGALVAF+IFGRRAQ++VYRKAEGQTGAAAWALDNLRG
Sbjct 61 AVVAGLLIGGFTKFTLIPLGVVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+ DAVHRVIGRPGVIFVGEG+ RVKPLLAQEKKRTARLVG+ PIYDI
Sbjct 121 KWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGAPNRVKPLLAQEKKRTARLVGETPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNG+GEVPLAKLERHL +LPANITVKQMD +ESRLAALG++ G +PKGPLP AKM
Sbjct 181 IVGNGEGEVPLAKLERHLNKLPANITVKQMDAIESRLAALGTKVGPAAVPKGPLPQAAKM 240
Query 241 RSVQRTVRRK 250
R VQRT RR+
Sbjct 241 RGVQRTARRR 250
>gi|15827382|ref|NP_301645.1| hypothetical protein ML0857 [Mycobacterium leprae TN]
gi|221229859|ref|YP_002503275.1| hypothetical protein MLBr_00857 [Mycobacterium leprae Br4923]
gi|2342615|emb|CAB11386.1| hypothetical protein MLCB22.21 [Mycobacterium leprae]
gi|13092932|emb|CAC31238.1| putative membrane protein [Mycobacterium leprae]
gi|219932966|emb|CAR70952.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=250
Score = 376 bits (965), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 202/250 (81%), Positives = 220/250 (88%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAKPRNAA KAA+A+A AARKAA+RQRR QLWQAFT+QR EDKRL+PYMI AF L+V A
Sbjct 1 MAKPRNAAAHKAARAEAKAARKAASRQRRLQLWQAFTIQRTEDKRLIPYMIAAFSLMVSA 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SV GV GG TM T+I LGV+LGALVAF+IFGRR Q++VY KAEGQTG AAWALDNLRG
Sbjct 61 SVTAGVLVGGLTMITLILLGVVLGALVAFIIFGRRTQQSVYHKAEGQTGGAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRV+PGVAA G+ DAVHRVIGRPGVIFV EGSAARVKPLLAQEKKRTARLVGDVPIYDI
Sbjct 121 KWRVSPGVAANGHFDAVHRVIGRPGVIFVAEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNGDGEV L KLERHL RLPANI+VKQ+D +ESRLAALGSRAGA ++PKGPLP KM
Sbjct 181 IVGNGDGEVALVKLERHLARLPANISVKQVDILESRLAALGSRAGASLIPKGPLPNAGKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 241 RGVQRTVRRK 250
>gi|41408058|ref|NP_960894.1| hypothetical protein MAP1960 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396413|gb|AAS04277.1| hypothetical protein MAP_1960 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461819|gb|EGO40675.1| hypothetical protein MAPs_26550 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=250
Score = 370 bits (951), Expect = 8e-101, Method: Compositional matrix adjust.
Identities = 214/250 (86%), Positives = 233/250 (94%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK R+AA++KAA+AQA AARKAAAR+RRAQLWQAF +QR+EDKRLLPYMIGAFLL+VG
Sbjct 1 MAKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGV 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVGVWAGG TM T+IP GV+LGALVAF++FGRRAQ++VYRKAEGQTGAAAWALDNLRG
Sbjct 61 SVGVGVWAGGLTMITLIPFGVVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVAATG+ DAVHRVIGRPGVI VGEGS RV+PLLAQEKKRTARL+GDVPIYDI
Sbjct 121 KWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPLLAQEKKRTARLIGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGNG+ EVPLAKLERHLTRLPANITVKQMDT+ESRLAALGSRAGA VMPKGPLP KM
Sbjct 181 IVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKM 240
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 241 RGVQRTVRRK 250
>gi|333990324|ref|YP_004522938.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333486292|gb|AEF35684.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=250
Score = 368 bits (945), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 190/250 (76%), Positives = 213/250 (86%), Gaps = 0/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
M +PR AE+KAA+ A A RKAA+++RR QLWQAF LQRKEDKRLLPYMIGAF+L+ G
Sbjct 1 MPRPRTTAENKAAREAAKATRKAASKERRTQLWQAFQLQRKEDKRLLPYMIGAFVLVSGV 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
+ + + G F T IPLG+LLGAL+AFVIFGRRAQRTVYRKAEGQ GAAAWALDN+RG
Sbjct 61 TTALALNGGTFAKVTTIPLGLLLGALLAFVIFGRRAQRTVYRKAEGQAGAAAWALDNMRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVT VAATG LDAVHRVIGRPGVIFV EGSA R+KPLLAQEKKRTARLVGDVPIYD+
Sbjct 121 KWRVTQAVAATGQLDAVHRVIGRPGVIFVAEGSATRLKPLLAQEKKRTARLVGDVPIYDV 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
+VGNGDGEVPLAKLER LT+LPANI+ KQM+++ESRLAALGSR G MPKGPLP AKM
Sbjct 181 MVGNGDGEVPLAKLERFLTKLPANISAKQMESLESRLAALGSRTGTAAMPKGPLPGGAKM 240
Query 241 RSVQRTVRRK 250
R VQR VRR+
Sbjct 241 RGVQRAVRRR 250
>gi|240168289|ref|ZP_04746948.1| hypothetical protein MkanA1_03192 [Mycobacterium kansasii ATCC
12478]
Length=249
Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 215/250 (86%), Positives = 230/250 (92%), Gaps = 1/250 (0%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAKPRNAAE+KAAKA A+AARKAAARQRR QLWQAF +QRKEDKRLLPYMIGAF+LIVG
Sbjct 1 MAKPRNAAENKAAKAAASAARKAAARQRRTQLWQAFNIQRKEDKRLLPYMIGAFVLIVGV 60
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
SVGVGVWAGG TM T+I GV+LGALVAF+IFGRRAQR +YR+AEGQTGAAAW LDNLRG
Sbjct 61 SVGVGVWAGGLTMITLIIFGVVLGALVAFIIFGRRAQRNIYRQAEGQTGAAAWVLDNLRG 120
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
KWRVTPGVA TG+ DAVHRVIGRPGVI VGEGSA RVKPLLAQEKKRTARLVGDVPIYDI
Sbjct 121 KWRVTPGVATTGHFDAVHRVIGRPGVILVGEGSAGRVKPLLAQEKKRTARLVGDVPIYDI 180
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
++GNGDGEVPLAKLERHLT+LPANITVKQMDT+ESRLAALGSRA AG +PKGPLP KM
Sbjct 181 VIGNGDGEVPLAKLERHLTKLPANITVKQMDTLESRLAALGSRA-AGALPKGPLPNAGKM 239
Query 241 RSVQRTVRRK 250
R VQRTVRRK
Sbjct 240 RGVQRTVRRK 249
>gi|169629028|ref|YP_001702677.1| hypothetical protein MAB_1940c [Mycobacterium abscessus ATCC
19977]
gi|169240995|emb|CAM62023.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=249
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/227 (71%), Positives = 187/227 (83%), Gaps = 3/227 (1%)
Query 25 ARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLG 84
++ RRAQ+WQAF +QRKEDKRLLPYMIGA ++IV A G ++GG + F LGV+LG
Sbjct 25 SKARRAQMWQAFQIQRKEDKRLLPYMIGAIVVIVAAFAVAGYFSGGISTFLFPILGVVLG 84
Query 85 ALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRP 144
LVAF+IFGRR Q++V+ KAEGQ GAA WALDN+RG+WRVT VA T LD VHRVIGRP
Sbjct 85 VLVAFIIFGRRVQKSVFTKAEGQKGAAGWALDNMRGRWRVTTAVAGTTQLDVVHRVIGRP 144
Query 145 GVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPAN 204
G+IFV EG+ R+ PLLAQEKKRTARLVGD PIYD+IVGN DG+VPL+KLERHLT+LPAN
Sbjct 145 GIIFVAEGAPGRLGPLLAQEKKRTARLVGDTPIYDVIVGNEDGQVPLSKLERHLTKLPAN 204
Query 205 ITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMR-SVQRTVRRK 250
IT KQMD++ESRLAALGSRA A MPKGPLP AKMR +QRT+RR+
Sbjct 205 ITAKQMDSLESRLAALGSRAAA--MPKGPLPGQAKMRGGMQRTIRRR 249
>gi|331698338|ref|YP_004334577.1| hypothetical protein Psed_4572 [Pseudonocardia dioxanivorans
CB1190]
gi|326953027|gb|AEA26724.1| hypothetical protein Psed_4572 [Pseudonocardia dioxanivorans
CB1190]
Length=244
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/241 (63%), Positives = 187/241 (78%), Gaps = 2/241 (0%)
Query 10 SKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAG 69
KAA++ A R+AA++QRR+Q+++AF +QR+EDK L+P M+GA +L G ++G +
Sbjct 6 DKAARSAAKRERRAASKQRRSQIFEAFKMQRREDKLLIPLMVGAVVL--GGALGFVIGLF 63
Query 70 GFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVA 129
+ +PLG+ +GAL A IFGRR QRTVY KAEGQ GAA WALDNLRG+WRVT V+
Sbjct 64 WHLQWFTLPLGIAVGALGAVSIFGRRVQRTVYGKAEGQPGAAGWALDNLRGQWRVTSSVS 123
Query 130 ATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEV 189
+LDAVHRVIG PGV+ VGEGS RV+PLLAQEKKRTAR+VG+ PIYDI+VGNGD EV
Sbjct 124 GNTHLDAVHRVIGLPGVVLVGEGSPHRVRPLLAQEKKRTARVVGNTPIYDIVVGNGDNEV 183
Query 190 PLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRR 249
PL+KL HL +LP NI KQMD++E+RLAALG+R G MPKGPLP AKMRSVQRTVRR
Sbjct 184 PLSKLHTHLRKLPRNIDRKQMDSLETRLAALGTRTGTAAMPKGPLPQGAKMRSVQRTVRR 243
Query 250 K 250
+
Sbjct 244 R 244
>gi|343924147|ref|ZP_08763710.1| hypothetical protein GOALK_002_01010 [Gordonia alkanivorans NBRC
16433]
gi|343765952|dbj|GAA10636.1| hypothetical protein GOALK_002_01010 [Gordonia alkanivorans NBRC
16433]
Length=247
Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/224 (62%), Positives = 174/224 (78%), Gaps = 2/224 (0%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
+RR QLWQAF +QRKEDKRL+PYM+G +L + +G G + + +IPLG++LG L
Sbjct 25 ERRQQLWQAFQMQRKEDKRLIPYMVGVIVLSIAVFTALGFLLG--SPWLLIPLGLVLGVL 82
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
AF++FGRR Q+ VY KAEGQ GAA WAL N+RG+WRV V+ T +LDAVHRVIG+PGV
Sbjct 83 GAFILFGRRVQKNVYTKAEGQPGAAGWALGNMRGQWRVAQAVSGTSHLDAVHRVIGKPGV 142
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
I VGEGS RVK LL QEKK+ AR+VGD PIY+I+VGN DG+VPL+KLERH+ +LP+NI
Sbjct 143 ILVGEGSPTRVKSLLNQEKKKAARVVGDTPIYEIMVGNDDGQVPLSKLERHINKLPSNID 202
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
K+M+T+E RLAAL S+A MPKGPLP AKM+S+QRT RR+
Sbjct 203 RKRMETLEGRLAALSSKAPGPGMPKGPLPGNAKMKSMQRTARRR 246
>gi|54023637|ref|YP_117879.1| hypothetical protein nfa16690 [Nocardia farcinica IFM 10152]
gi|54015145|dbj|BAD56515.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=247
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/224 (64%), Positives = 175/224 (79%), Gaps = 3/224 (1%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
+RR QLWQAF +QRKEDK LLP MIGA + I + +G + G F ++P+G+LLGAL
Sbjct 27 ERRQQLWQAFQMQRKEDKLLLPLMIGALVGITALFLVIG-FVFGIPWF-LLPIGILLGAL 84
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
VAF+IFGRR QR+VY KAEGQ GAAAW LDNL+GKWRV+ GVAAT LDAVHRVIG PGV
Sbjct 85 VAFIIFGRRVQRSVYAKAEGQAGAAAWVLDNLQGKWRVSNGVAATTQLDAVHRVIGLPGV 144
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
I +GEGS R+K L+AQEKKRTARL+GD PIYD ++GN +G+VPL L+RHLT+LP NI
Sbjct 145 ILIGEGSPQRLKALIAQEKKRTARLIGDTPIYDFVIGNEEGQVPLKNLQRHLTKLPRNID 204
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
K+MD +E RL+AL R G +PKGP+P AKM+ +QRT+RR+
Sbjct 205 TKRMDLIEGRLSALSRRTGPA-LPKGPMPAGAKMKGMQRTIRRR 247
>gi|302524540|ref|ZP_07276882.1| transmembrane protein [Streptomyces sp. AA4]
gi|302433435|gb|EFL05251.1| transmembrane protein [Streptomyces sp. AA4]
Length=242
Score = 284 bits (726), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 139/242 (58%), Positives = 185/242 (77%), Gaps = 4/242 (1%)
Query 9 ESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWA 68
+ K A QA ++AA++ RR QL++AF +QR+ED L+P+M+G+ +++ G +G+
Sbjct 5 QDKEAAKQAKREKRAASKARRGQLFEAFKMQRREDPMLIPWMVGSIVVVAGVLFCIGLIF 64
Query 69 GGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGV 128
G +T++PLGV+LG L+A +IFGRR QRTVY KA+GQ GA AWAL+N+RGKW+VTP V
Sbjct 65 G--IQWTLLPLGVVLGILLAVIIFGRRVQRTVYGKADGQPGAGAWALENMRGKWKVTPTV 122
Query 129 AATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGE 188
AAT LDAVHRV+G PGVI V EG+ RVK LLAQEKKR +RLVGD PIYD+ +G+ D +
Sbjct 123 AATTQLDAVHRVLGHPGVILVAEGAPHRVKGLLAQEKKRVSRLVGDTPIYDVTIGHEDKQ 182
Query 189 VPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVR 248
VPL KL+ HLT+LP N+ Q+D +E++LAALGSR A MPKGP+P AKMR+VQRT+R
Sbjct 183 VPLKKLQSHLTKLPRNLKPAQIDALEAKLAALGSRGAA--MPKGPMPAGAKMRNVQRTIR 240
Query 249 RK 250
R+
Sbjct 241 RR 242
>gi|262202970|ref|YP_003274178.1| hypothetical protein Gbro_3078 [Gordonia bronchialis DSM 43247]
gi|262086317|gb|ACY22285.1| hypothetical protein Gbro_3078 [Gordonia bronchialis DSM 43247]
Length=247
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/224 (65%), Positives = 178/224 (80%), Gaps = 2/224 (0%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
+RR QLWQAF +QRKEDKRLLPYMIG F+++V VG+G G +F +PLG++LG L
Sbjct 25 ERRQQLWQAFQMQRKEDKRLLPYMIGLFVVVVAVFVGLGFAFGSLWLF--LPLGIVLGLL 82
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
AF++FGRR QR+VY KAEGQ GAA WAL N+RG+WRV V+ T +LDAVHRVIG+PGV
Sbjct 83 GAFILFGRRVQRSVYTKAEGQPGAAGWALGNMRGQWRVQQAVSGTSHLDAVHRVIGKPGV 142
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
I V EGS RVK LLAQEKK+ AR+VGD PIY+I+VGN DG+VPL+KLE+H+ +LP NI
Sbjct 143 ILVAEGSPTRVKSLLAQEKKKAARVVGDTPIYEIVVGNDDGQVPLSKLEKHINKLPKNIN 202
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
K+MDT+E RLAALGS+A MPKGP+P AKMRS+QRT RR+
Sbjct 203 AKRMDTLEGRLAALGSKAPGPGMPKGPMPAGAKMRSMQRTARRR 246
>gi|324997511|ref|ZP_08118623.1| hypothetical protein PseP1_02041 [Pseudonocardia sp. P1]
Length=245
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/224 (64%), Positives = 172/224 (77%), Gaps = 4/224 (1%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
QRR Q+WQAF QRKEDK+LLP MIG F+ + VG W G T F +P GVL+GAL
Sbjct 26 QRRQQIWQAFQTQRKEDKKLLPIMIGVFVGAIALLTLVG-WLFGLTWF-FVPFGVLIGAL 83
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
AF IFGRR QR+VY KA+GQ GAA WALDN+RG+WR+T +A T LDAVHRVIGRPG+
Sbjct 84 GAFSIFGRRVQRSVYVKADGQPGAAGWALDNMRGQWRITQSIAGTTQLDAVHRVIGRPGI 143
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
+FV EG+ RVK LLAQEKKRTAR+ G PIYD+IVGN +G+VPL L+R+L +LP NI+
Sbjct 144 VFVAEGAPHRVKNLLAQEKKRTARVAGTTPIYDVIVGNDEGQVPLKGLQRYLMKLPRNIS 203
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
+MD++E+RL ALGSRA A MPKGP+P AKMRSVQR VRR+
Sbjct 204 AAEMDSLENRLNALGSRAAA--MPKGPMPQGAKMRSVQRAVRRR 245
>gi|312140209|ref|YP_004007545.1| integral membrane protein [Rhodococcus equi 103S]
gi|325677045|ref|ZP_08156716.1| integral membrane protein [Rhodococcus equi ATCC 33707]
gi|311889548|emb|CBH48865.1| putative integral membrane protein [Rhodococcus equi 103S]
gi|325552207|gb|EGD21898.1| integral membrane protein [Rhodococcus equi ATCC 33707]
Length=251
Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/224 (63%), Positives = 175/224 (79%), Gaps = 3/224 (1%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGAL 86
+RR QLWQAF +QRKEDK LLP MIGA + VG+ G + ++P+GVL+G L
Sbjct 31 ERRTQLWQAFQMQRKEDKLLLPMMIGALVASALVFFLVGLIFG--IEWFLLPIGVLVGVL 88
Query 87 VAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGV 146
+AF+IFG+R Q+TVY KAEGQ GAAAWAL+N++G WRV V T LDAVHRVIGRPGV
Sbjct 89 LAFIIFGKRVQKTVYGKAEGQAGAAAWALENMQGAWRVKNAVTGTAQLDAVHRVIGRPGV 148
Query 147 IFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANIT 206
I V EGS RVK LLAQEKK+TARLVGD PIYDI+VGN +G+VPL++L ++L +LP NI
Sbjct 149 ILVAEGSPQRVKGLLAQEKKKTARLVGDTPIYDIVVGNDEGQVPLSQLVKYLNKLPRNID 208
Query 207 VKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
K+MD++ESRLAALGSR+GA MPKGPLP A+M+ +QRT+RR+
Sbjct 209 TKRMDSIESRLAALGSRSGAA-MPKGPLPPGARMKGMQRTIRRR 251
>gi|226307108|ref|YP_002767068.1| hypothetical protein RER_36210 [Rhodococcus erythropolis PR4]
gi|229490292|ref|ZP_04384134.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|226186225|dbj|BAH34329.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229322824|gb|EEN88603.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length=251
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/229 (62%), Positives = 178/229 (78%), Gaps = 12/229 (5%)
Query 27 QRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGAS-----VGVGVWAGGFTMFTMIPLGV 81
+RR QLWQAF +QRK+DK LLP MIG +VGA+ VG+ +W G F ++P+G+
Sbjct 30 ERRTQLWQAFQMQRKDDKLLLPLMIGT---LVGAALVFFLVGL-IW--GLQWF-LLPIGI 82
Query 82 LLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVI 141
+LG L AF+IFGRR Q++VY+KAEGQ GAAAWALDN++G WRVT VA T LDAVHRV+
Sbjct 83 VLGLLGAFIIFGRRVQKSVYKKAEGQAGAAAWALDNMQGAWRVTNAVAGTTQLDAVHRVV 142
Query 142 GRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRL 201
GRPGVI V EGS RVK LLAQEKK+TARL+GD PIYDII+GN +G+VPL++L+R+L +L
Sbjct 143 GRPGVILVAEGSPQRVKGLLAQEKKKTARLIGDTPIYDIIIGNDEGQVPLSQLQRYLNKL 202
Query 202 PANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
P NI K+MD +E RLAAL +R G +PKGP+P AKM+ +QRT+RR+
Sbjct 203 PRNIDTKRMDNIEGRLAALSARGGGAALPKGPMPGGAKMKGMQRTIRRR 251
>gi|326382495|ref|ZP_08204186.1| hypothetical protein SCNU_06135 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198614|gb|EGD55797.1| hypothetical protein SCNU_06135 [Gordonia neofelifaecis NRRL
B-59395]
Length=251
Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/244 (59%), Positives = 188/244 (78%), Gaps = 9/244 (3%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK ++ + SK AK A ARKAA+++RR Q+WQAF +QRKEDK L+P M+G IV A
Sbjct 1 MAKAQDKS-SKEAKQAAKVARKAASKERRQQIWQAFQMQRKEDKALIPLMVGT---IVVA 56
Query 61 SVGVGVWAGGFTMFTM---IPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDN 117
++ G+ G F + +PLG++LGAL+AFV+FGRR Q +V++KAEGQ GAA WAL N
Sbjct 57 TLIFGL-LGQFVFHNLWLTLPLGIILGALLAFVLFGRRVQSSVFKKAEGQPGAAGWALSN 115
Query 118 LRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPI 177
+RG+WRV V T +LDAVHRVIG+PGVI VGEGS RVKPLL+QEKK+ AR+VGD PI
Sbjct 116 IRGQWRVQQAVTGTSHLDAVHRVIGKPGVILVGEGSPTRVKPLLSQEKKKAARVVGDTPI 175
Query 178 YDIIVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAG-VMPKGPLPT 236
Y+++VG+G+G+VPL+KLER++ +LP+NI K+MD +E RL+AL ++ GAG MPKGP+P
Sbjct 176 YEVMVGDGEGQVPLSKLERYIRKLPSNIDRKRMDALEGRLSALKAKGGAGAAMPKGPMPQ 235
Query 237 TAKM 240
AKM
Sbjct 236 GAKM 239
>gi|226360296|ref|YP_002778074.1| hypothetical protein ROP_08820 [Rhodococcus opacus B4]
gi|226238781|dbj|BAH49129.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=252
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/228 (65%), Positives = 178/228 (79%), Gaps = 6/228 (2%)
Query 25 ARQRRAQLWQAFTLQRKEDKRLLPYMIGAF--LLIVGASVGVGVWAGGFTMFTMIPLGVL 82
+++RR QLWQAF +QRKEDK LLP M+G L +V VG+ +W G F ++P+G+L
Sbjct 29 SKERRTQLWQAFQMQRKEDKLLLPLMLGTLVGLAVVFFLVGL-IW--GLQWF-LLPIGLL 84
Query 83 LGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIG 142
LG L AF+IFGRR Q+TVY KAEGQ GAAAWALDN++G WRVT VA T LDAVHRVIG
Sbjct 85 LGVLGAFIIFGRRVQKTVYGKAEGQAGAAAWALDNMQGSWRVTSAVAGTTQLDAVHRVIG 144
Query 143 RPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLP 202
RPGVI V EGS RVK LLAQEKK+TARLVGD PIYDI++GN +G+VPL++L++HL +LP
Sbjct 145 RPGVILVAEGSPQRVKSLLAQEKKKTARLVGDTPIYDIVIGNDEGQVPLSQLQKHLNKLP 204
Query 203 ANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
NI K+MD +ESRLAAL SR G +PKGP+P AKMR VQRT+RR+
Sbjct 205 KNIDTKRMDAIESRLAALSSRGGGAALPKGPMPGGAKMRGVQRTIRRR 252
>gi|111018168|ref|YP_701140.1| hypothetical protein RHA1_ro01155 [Rhodococcus jostii RHA1]
gi|110817698|gb|ABG92982.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=252
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/228 (65%), Positives = 178/228 (79%), Gaps = 6/228 (2%)
Query 25 ARQRRAQLWQAFTLQRKEDKRLLPYMIGAF--LLIVGASVGVGVWAGGFTMFTMIPLGVL 82
+++RR QLWQAF +QRKEDK LLP M+G L +V VG+ +W G F ++P+G+L
Sbjct 29 SKERRTQLWQAFQMQRKEDKLLLPLMLGTLIGLAVVFFLVGL-IW--GLQWF-LLPIGLL 84
Query 83 LGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIG 142
LG L AF+IFGRR Q+TVY KAEGQ GAAAWALDN++G WRVT VA T LDAVHRVIG
Sbjct 85 LGVLGAFIIFGRRVQKTVYGKAEGQAGAAAWALDNMQGSWRVTSAVAGTTQLDAVHRVIG 144
Query 143 RPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLP 202
RPGVI V EGS RVK LLAQEKK+TARLVGD PIYDI++GN +G+VPL++L++HL +LP
Sbjct 145 RPGVILVAEGSPQRVKSLLAQEKKKTARLVGDTPIYDIVIGNDEGQVPLSQLQKHLNKLP 204
Query 203 ANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
NI K+MD +ESRLAAL SR G +PKGP+P AKMR VQRT+RR+
Sbjct 205 KNIDTKRMDAIESRLAALSSRGGGAALPKGPMPGGAKMRGVQRTIRRR 252
>gi|257054813|ref|YP_003132645.1| hypothetical protein Svir_07520 [Saccharomonospora viridis DSM
43017]
gi|256584685|gb|ACU95818.1| hypothetical protein Svir_07520 [Saccharomonospora viridis DSM
43017]
Length=242
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/242 (60%), Positives = 190/242 (79%), Gaps = 4/242 (1%)
Query 9 ESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWA 68
+ K A QA ++AA + RRAQ++QAF++QRKEDK L+P+M+G FL++ GA G+G W
Sbjct 5 QDKEAAKQAKQEKRAAKKARRAQIFQAFSMQRKEDKALIPWMLGWFLVVAGAVFGLG-WL 63
Query 69 GGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGV 128
G + ++P+G++LG L A ++FGRR Q+TVY KAEGQ GAAAWALDNLRG+WRVT V
Sbjct 64 MGIQWW-LLPIGIMLGLLAAVIVFGRRVQKTVYTKAEGQPGAAAWALDNLRGRWRVTQTV 122
Query 129 AATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGE 188
AAT LDAVHRV+G PG+I VGEG+ RVK LLAQEKKR ARLVGD PIYD+IVG G+G+
Sbjct 123 AATTQLDAVHRVLGGPGIILVGEGAPHRVKNLLAQEKKRIARLVGDTPIYDVIVGTGEGQ 182
Query 189 VPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVR 248
VPL KL+ +L +LP N+ +++D +E++LAALG+R A MPKGP+P AKMR++QRT+R
Sbjct 183 VPLRKLQGYLMKLPRNLRGREVDALETKLAALGNRGAA--MPKGPIPQGAKMRNLQRTIR 240
Query 249 RK 250
R+
Sbjct 241 RR 242
>gi|317507999|ref|ZP_07965690.1| integral membrane protein [Segniliparus rugosus ATCC BAA-974]
gi|316253694|gb|EFV13073.1| integral membrane protein [Segniliparus rugosus ATCC BAA-974]
Length=247
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/249 (59%), Positives = 184/249 (74%), Gaps = 5/249 (2%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
M KP A+ SK AKA A ARK +++RR QLWQAF LQR+ED+ LLP MIGA +L +
Sbjct 1 MPKP-PASTSKEAKAAARLARKRQSKERRQQLWQAFNLQRREDRWLLPLMIGALVLGIAI 59
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
G+G+ GG FT PLGVL G + AFV+F RR QRT Y AEG+TGAA+W L+ LRG
Sbjct 60 GFGIGLATGGIWFFT--PLGVLGGLIGAFVVFSRRIQRTAYANAEGKTGAASWVLEQLRG 117
Query 121 KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDI 180
WR+TPGVAA G D VHRV+GRPGVI VGEG A R + L++QEK++ A+LVGD PIY++
Sbjct 118 AWRITPGVAANGQFDVVHRVVGRPGVILVGEGVATRTRGLVSQEKRKIAKLVGDTPIYEV 177
Query 181 IVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKM 240
IVGN +G++PL+KL+RH+ RLP NI K+MD +E++ AALG+R +PKGPLP AKM
Sbjct 178 IVGNEEGDIPLSKLQRHILRLPNNIDTKRMDALEAKFAALGARPTP--LPKGPLPQGAKM 235
Query 241 RSVQRTVRR 249
R++QR RR
Sbjct 236 RNLQRATRR 244
>gi|296139232|ref|YP_003646475.1| hypothetical protein Tpau_1512 [Tsukamurella paurometabola DSM
20162]
gi|296027366|gb|ADG78136.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=253
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/226 (58%), Positives = 169/226 (75%), Gaps = 2/226 (0%)
Query 25 ARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLG 84
+++RR Q+WQAF +QRKEDK LLP MIG F + ASV +G + G + MF + LG+L G
Sbjct 26 SKERRKQMWQAFQMQRKEDKALLPIMIGVFFAAIVASVVIGYFFGNWWMFLI--LGILFG 83
Query 85 ALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRP 144
AL AF+ F RR +R+VY K EGQ GAA WAL+N+RG WRV VA T + DAVHRVIG+P
Sbjct 84 ALGAFITFTRRLERSVYAKNEGQVGAAGWALENMRGSWRVNQAVARTTHADAVHRVIGKP 143
Query 145 GVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPAN 204
G+I + EG+ RV+ L+AQEKK+TAR+VG PIY+ +VG +G+VPL KL++ L +LP+N
Sbjct 144 GIILIAEGNEGRVRGLMAQEKKKTARVVGQTPIYEFVVGPDEGQVPLRKLQKQLNKLPSN 203
Query 205 ITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
I K++D +E RLAAL +R G +P+GPLP AKMRSVQRTVRRK
Sbjct 204 INGKKIDELEGRLAALSNRGGGAQLPRGPLPQGAKMRSVQRTVRRK 249
>gi|333918929|ref|YP_004492510.1| integral membrane protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333481150|gb|AEF39710.1| Integral membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=250
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/241 (56%), Positives = 177/241 (74%), Gaps = 2/241 (0%)
Query 10 SKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAG 69
KA + + A R+ +++RR+QLWQAF +QRKEDK L+P M G +L G+G
Sbjct 12 DKAERKELKATRRKRSKERRSQLWQAFKMQRKEDKWLVPIMAGTIVLTTLVMFGLGWLMN 71
Query 70 GFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVA 129
+F +P+G++LG L++ ++FGRR +TVY+KAEGQTGAAAWALD+L+G WRVT VA
Sbjct 72 AQWLF--LPMGLILGVLLSVIVFGRRVTKTVYKKAEGQTGAAAWALDSLKGPWRVTNAVA 129
Query 130 ATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEV 189
T +LDAVHRV+GRPG+I VGEG+ RVK LL QEKKR +RLVGD PIY+IIVGN ++
Sbjct 130 GTTHLDAVHRVLGRPGIILVGEGAPHRVKSLLTQEKKRVSRLVGDTPIYEIIVGNEADQI 189
Query 190 PLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRR 249
PL KL++ + RLP NIT KQMD++E RLAA+ SR MP GP+P KM+SVQRT++R
Sbjct 190 PLPKLQKAMNRLPKNITRKQMDSLEQRLAAIASRTSGPAMPHGPVPGGGKMKSVQRTIKR 249
Query 250 K 250
+
Sbjct 250 R 250
>gi|134098208|ref|YP_001103869.1| hypothetical protein SACE_1625 [Saccharopolyspora erythraea NRRL
2338]
gi|291004371|ref|ZP_06562344.1| hypothetical protein SeryN2_07617 [Saccharopolyspora erythraea
NRRL 2338]
gi|133910831|emb|CAM00944.1| hypothetical protein SACE_1625 [Saccharopolyspora erythraea NRRL
2338]
Length=243
Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/247 (56%), Positives = 177/247 (72%), Gaps = 12/247 (4%)
Query 7 AAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG- 65
A + KAA +A R+ A+R R Q+++AF +QR+EDK LLP MIGAFL G SV V
Sbjct 2 AKQDKAAGKEAAKQRRKASRGRVKQIFEAFKMQRREDKLLLPLMIGAFL---GVSVVVFL 58
Query 66 ---VWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKW 122
+W + +P+G+ LG L A ++FGRR Q VYRKAEGQ GAA WAL+NLRGKW
Sbjct 59 LGLIWG---LQWVFLPVGLALGLLAATIVFGRRVQSNVYRKAEGQPGAAGWALENLRGKW 115
Query 123 RVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIV 182
++ VA T LDAVHRVIG+PG++ VGEG+ +R+KPL+ QEKKR ARLVGD PIY+++V
Sbjct 116 NLSQAVAGTTQLDAVHRVIGKPGIVLVGEGAPSRLKPLIQQEKKRIARLVGDTPIYEVLV 175
Query 183 GNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRS 242
G +G+VPL KL+ H+ +LP NI Q+D +E+RLAAL SR A MPKGP+P AKMR+
Sbjct 176 GTEEGQVPLRKLQTHMMKLPRNINAGQIDALENRLAALASRGNA--MPKGPMPQGAKMRN 233
Query 243 VQRTVRR 249
VQR +RR
Sbjct 234 VQRAMRR 240
>gi|300783158|ref|YP_003763449.1| hypothetical protein AMED_1232 [Amycolatopsis mediterranei U32]
gi|299792672|gb|ADJ43047.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340524537|gb|AEK39742.1| hypothetical protein RAM_06250 [Amycolatopsis mediterranei S699]
Length=242
Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/242 (56%), Positives = 185/242 (77%), Gaps = 4/242 (1%)
Query 9 ESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWA 68
+ K A QA ++AA++ RR QL++AF +QRKED L+P+M GA +++ G G+G +
Sbjct 5 QDKEAAKQAKKEKRAASKARRGQLFEAFKMQRKEDPWLIPWMAGAIVVVAGVLFGIGFFF 64
Query 69 GGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGV 128
+ ++PLG++LGAL+A +IFGRR Q+TVY KA+GQ GAAAWAL+NLRGKW+VTP V
Sbjct 65 --HAQWVLLPLGLVLGALLAMIIFGRRVQKTVYSKADGQPGAAAWALENLRGKWKVTPTV 122
Query 129 AATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGE 188
AAT LDAVHRV+G PGV+ V EG+ RVK LLAQEKKR +RL+GD PIYD+ +G+ DG+
Sbjct 123 AATTQLDAVHRVLGGPGVVLVAEGAPHRVKTLLAQEKKRVSRLIGDTPIYDVTIGHEDGQ 182
Query 189 VPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVR 248
+PL KL+ +L +LP N+ Q+D +E++LAALG+R A +PKGP+P AKMR+VQRT+R
Sbjct 183 LPLKKLQGYLMKLPRNLKPAQVDALEAKLAALGNRGAA--LPKGPMPAGAKMRNVQRTIR 240
Query 249 RK 250
R+
Sbjct 241 RR 242
>gi|258652140|ref|YP_003201296.1| hypothetical protein Namu_1918 [Nakamurella multipartita DSM
44233]
gi|258555365|gb|ACV78307.1| hypothetical protein Namu_1918 [Nakamurella multipartita DSM
44233]
Length=252
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/226 (54%), Positives = 159/226 (71%), Gaps = 4/226 (1%)
Query 26 RQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGA 85
++RR QLWQAF +QRK+DK+LLPYMIGA + +W + ++PLG++LGA
Sbjct 30 KERRTQLWQAFQMQRKQDKKLLPYMIGAVVGTAAVLTLALMWF--LPWWAVLPLGIILGA 87
Query 86 LVAFVIFGRRAQRTVYRKAEGQTGAAAWAL-DNLRGKWRVTPGVAATGNLDAVHRVIGRP 144
+ A +IF RR Q+ VY +AEG GAAAWAL +NLRG WRVTP V+ LDAVHRV+GRP
Sbjct 88 MFAMIIFSRRVQKNVYAQAEGTPGAAAWALQNNLRGTWRVTPAVSGNTYLDAVHRVVGRP 147
Query 145 GVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPAN 204
G+I VGEGS RVKPLLAQEKK+ +R+VGD PIYD IVGN +GE L KL + +LP N
Sbjct 148 GIILVGEGSPHRVKPLLAQEKKKISRIVGDTPIYDFIVGNEEGETTLRKLAPSIMKLPRN 207
Query 205 ITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
I + +++RL+ L ++ G +PKGP+P K R++QR +RR+
Sbjct 208 IPADMVGDLDNRLSVLAAKTQGG-LPKGPMPAGVKQRNMQRAMRRR 252
>gi|296394634|ref|YP_003659518.1| integral membrane protein [Segniliparus rotundus DSM 44985]
gi|296181781|gb|ADG98687.1| integral membrane protein [Segniliparus rotundus DSM 44985]
Length=247
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/225 (59%), Positives = 162/225 (72%), Gaps = 4/225 (1%)
Query 25 ARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLG 84
+++RR QLWQAF +QR+ED+ LLP MIGA +L V VGVG+ GG FT PLG L G
Sbjct 24 SKERRQQLWQAFNVQRREDRWLLPLMIGAVVLGVALGVGVGLLTGGVWYFT--PLGALAG 81
Query 85 ALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRP 144
+ AF +F RR Q T Y AEG+TGAA+W L+ LRG WRVTPGVAA G D VHRVIG+P
Sbjct 82 VVGAFAVFSRRIQSTAYANAEGKTGAASWVLEQLRGAWRVTPGVAANGQFDVVHRVIGKP 141
Query 145 GVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPAN 204
GVI VGEG+ R + LL+QEK++ A+LVGD PIY+I+VGNG+G V LAKL+RH+ RLP N
Sbjct 142 GVILVGEGAPTRAQGLLSQEKRKIAKLVGDTPIYEIVVGNGEGCVALAKLQRHIMRLPNN 201
Query 205 ITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRR 249
I K+MD +E++ AALGSR LP AKMR++QR RR
Sbjct 202 IDTKRMDALEAKFAALGSRPTPLPKGP--LPPGAKMRNLQRATRR 244
>gi|256375073|ref|YP_003098733.1| hypothetical protein Amir_0927 [Actinosynnema mirum DSM 43827]
gi|255919376|gb|ACU34887.1| hypothetical protein Amir_0927 [Actinosynnema mirum DSM 43827]
Length=242
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/227 (57%), Positives = 170/227 (75%), Gaps = 6/227 (2%)
Query 25 ARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG-VWAGGFTMFTMIPLGVLL 83
+R +R Q+++AF +QR+EDK L+P M+ A L A+ +G +W + +P+G+ +
Sbjct 21 SRAKRGQIFEAFKMQRREDKALVPLMLLALLGATAAAFLLGLIWD---MHWVFLPMGIAV 77
Query 84 GALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGR 143
GAL+A VIFGRR QR V+ KA+GQ GAAAWALDNLRGKWRVT VA T + D VHRVIGR
Sbjct 78 GALLAIVIFGRRVQRNVFAKADGQPGAAAWALDNLRGKWRVTQAVAGTTSGDMVHRVIGR 137
Query 144 PGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPA 203
PG++ V EG+ RVK L+AQEKKR AR++G+ PIYD+IVG+ +G+VPL KL+ HL +LP
Sbjct 138 PGIVLVAEGAPHRVKGLIAQEKKRVARVIGETPIYDVIVGHEEGQVPLRKLQGHLMKLPR 197
Query 204 NITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
NI+ Q+DTVE+RL AL SR A MPKGP+P AKMR++QR +RR+
Sbjct 198 NISTAQVDTVENRLTALASRGAA--MPKGPVPQGAKMRNIQRAMRRR 242
>gi|319949777|ref|ZP_08023802.1| hypothetical protein ES5_09887 [Dietzia cinnamea P4]
gi|319436577|gb|EFV91672.1| hypothetical protein ES5_09887 [Dietzia cinnamea P4]
Length=251
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/230 (53%), Positives = 160/230 (70%), Gaps = 7/230 (3%)
Query 26 RQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGA 85
+++R Q+WQA +Q K+DK L P MIGA +L +G GG + M+PLGVL+G
Sbjct 23 KEQRGQMWQALKIQSKQDKLLWPLMIGAVVLSAVVFFLLGTLWGG--EWWMLPLGVLVGL 80
Query 86 LVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPG 145
++A V+F RR Q TVY KAEGQ GAAAWALD LR WRV VAAT + DAVHRV+GR G
Sbjct 81 MLAMVVFSRRVQNTVYGKAEGQPGAAAWALDQLRSGWRVNQAVAATTSFDAVHRVVGRCG 140
Query 146 VIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDG----EVPLAKLERHLTRL 201
++ VGEG R+KPL+ QEKK+ AR+VGD PIY++IVG+ +VPL KL R LTR
Sbjct 141 IVLVGEGQPHRLKPLMTQEKKKVARVVGDTPIYELIVGDDADATPEQVPLRKLNRRLTRY 200
Query 202 PANITVKQMDTVESRLAALGSRAGA-GVMPKGPLPTTAKMRSVQRTVRRK 250
P NI+ ++D +++RL AL ++ G MPKGP+P AK+R++QR+ RR+
Sbjct 201 PMNISRAKVDALDTRLRALSTKTGVQNQMPKGPVPQGAKVRNIQRSARRR 250
>gi|237785296|ref|YP_002906001.1| hypothetical protein ckrop_0697 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758208|gb|ACR17458.1| hypothetical protein ckrop_0697 [Corynebacterium kroppenstedtii
DSM 44385]
Length=256
Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/245 (46%), Positives = 164/245 (67%), Gaps = 9/245 (3%)
Query 1 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA 60
MAK A E K A+ +A++A +Q R+Q+WQAF +QRK+D +L+PYM+ A LL
Sbjct 1 MAKNDRAKEEKKAQ---RSAKRAQRKQTRSQMWQAFNIQRKQDNKLIPYMLLALLLPAVL 57
Query 61 SVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG 120
+G G ++ +I G++LGA +A ++F RR QR+VY +A GQ GAA WALDN+R
Sbjct 58 LFLLGFVWGNKWLWLII--GLILGATLAMLVFSRRLQRSVYDRASGQAGAAGWALDNMRD 115
Query 121 ----KWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVP 176
KW GV ++D VHRV+G PGV+ VGEG R+KP++ +E++R AR+VGD P
Sbjct 116 GVGMKWVTKQGVQVNNHMDLVHRVVGTPGVVLVGEGEKQRIKPMMDKERRRLARIVGDTP 175
Query 177 IYDIIVGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPT 236
IY+++ G G+ EVP+ KL+RHL +LP NI +++D++ SR+ +L + G MPKGP+P
Sbjct 176 IYEVVSGEGEDEVPIKKLQRHLMKLPRNIKKQEVDSLASRIESLDNVRGNMGMPKGPIPN 235
Query 237 TAKMR 241
AK++
Sbjct 236 QAKVQ 240
>gi|340794086|ref|YP_004759549.1| hypothetical protein CVAR_1120 [Corynebacterium variabile DSM
44702]
gi|340533996|gb|AEK36476.1| hypothetical protein CVAR_1120 [Corynebacterium variabile DSM
44702]
Length=257
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/251 (47%), Positives = 163/251 (65%), Gaps = 19/251 (7%)
Query 10 SKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGA----SVGVG 65
K K AA+KA +Q R Q+WQAF LQRK DK+L+P M+ L+ V S+ G
Sbjct 7 EKENKRLEKAAKKARRKQTRGQMWQAFQLQRKRDKKLVPLMLLGLLVPVALLLLLSIVFG 66
Query 66 VWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----K 121
W F ++ +G+L+GA+VA +IF RR Q VY + EGQ GAAAWALDNLR K
Sbjct 67 AW-----WFNLV-IGLLIGAVVAMIIFSRRLQSGVYDQIEGQPGAAAWALDNLRSGVGMK 120
Query 122 WRVTPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDII 181
W GVA+ ++DAVHRV+G PGV+ VGEG+ +R+KPL+ QE++R AR++G+ PIYD+
Sbjct 121 WITESGVASNTHMDAVHRVVGTPGVVLVGEGNRSRLKPLMTQERRRLARILGNTPIYDMY 180
Query 182 VGNGDGEVPLAKLERHLTRLPANITVKQMDTVESRLAA---LGSRAGAGVMPKGPLPTTA 238
+G+G+GEV + K++ L +LP N+ ++D + SR+ + L SR G+ +PKGPLP A
Sbjct 181 IGDGEGEVEVRKIQSALMKLPRNVKKNEVDALNSRIESISRLNSREGS--LPKGPLPRQA 238
Query 239 KMRSVQRTVRR 249
M + R RR
Sbjct 239 NMSGMNRRARR 249
>gi|172040930|ref|YP_001800644.1| hypothetical protein cur_1250 [Corynebacterium urealyticum DSM
7109]
gi|171852234|emb|CAQ05210.1| hypothetical protein cu1250 [Corynebacterium urealyticum DSM
7109]
Length=256
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/218 (48%), Positives = 147/218 (68%), Gaps = 7/218 (3%)
Query 28 RRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGALV 87
+R QLWQAF LQR+ DK+L+P M+ FL+ V + + G+ +I +G+LLG V
Sbjct 25 QRGQLWQAFKLQRQRDKKLIPLMLVGFLVPVVLLLLLST-VFGWWWLNLI-VGILLGIAV 82
Query 88 AFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----KWRVTPGVAATGNLDAVHRVIGR 143
A +F RR Q+ VY + EG+ GAAAW L NLR KW V PG+A NLDAVHRV+G
Sbjct 83 AVWVFTRRLQKGVYEQIEGEAGAAAWTLSNLRDGVGMKWIVEPGIAQNTNLDAVHRVVGT 142
Query 144 PGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPA 203
PG++ VGEG + RVK ++A+E+K+ AR+ G+ PIYD+IVG+G+GEVP+ KL+ HL RLP
Sbjct 143 PGIVLVGEGDSNRVKQMIARERKKIARIAGNAPIYDVIVGDGEGEVPVRKLQNHLMRLPR 202
Query 204 NITVKQMDTVESRLAALGS-RAGAGVMPKGPLPTTAKM 240
N+ ++D + SR+ ++ ++ MPKGPLP +M
Sbjct 203 NVKKNEVDALNSRIDSISRLQSPMANMPKGPLPKGGQM 240
>gi|227488480|ref|ZP_03918796.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227543086|ref|ZP_03973135.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227091558|gb|EEI26870.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181074|gb|EEI62046.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC
51866]
Length=257
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/237 (42%), Positives = 154/237 (65%), Gaps = 11/237 (4%)
Query 11 KAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLL--IVGASVGVGVWA 68
KA + +A A++ +Q R Q+W+AF +QRK+DK+L+P M+ AFL I+G +G+ A
Sbjct 10 KAQEKEAKKAKREQRKQTRKQVWEAFNMQRKQDKKLIPLMLSAFLGLGILGFLIGLAFSA 69
Query 69 GGFTMFTMIPLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----KWRV 124
F + +G++LGA++A IF +R + + Y + Q GAAAW ++NL+ +WR
Sbjct 70 QWFGLI----IGLMLGAMLAMYIFPKRMESSFYERTADQPGAAAWVVENLKDGPGMQWRS 125
Query 125 TPGVAATGNLDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGN 184
VAA ++D VHRV+G PG+I VGEG R+KPL+ Q+KKR R+ +P+Y+ IVG+
Sbjct 126 KTAVAANTHMDVVHRVVGAPGIILVGEGEPHRLKPLMEQQKKRLNRIAKKIPVYEFIVGD 185
Query 185 GDGEVPLAKLERHLTRLPANITVKQMDTVESRLAALGSRAGAGV-MPKGPLPTTAKM 240
G+G+VPL KL+R + +LP N + + +R+ ++ +++G G +PKGPLP AKM
Sbjct 186 GEGQVPLKKLQREIMKLPRNYKKNAVPGMAARVESMDAQSGPGAGLPKGPLPKGAKM 242
>gi|344044879|gb|EGV40554.1| hypothetical protein CgS9114_08221 [Corynebacterium glutamicum
S9114]
Length=260
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/239 (47%), Positives = 153/239 (65%), Gaps = 10/239 (4%)
Query 19 AARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG-VWAGGFTMFTMI 77
AA+KA +Q R+Q+WQ F +QRK+DK L+P ++ A L I +G +W G + M+
Sbjct 18 AAKKAQRKQTRSQMWQVFNMQRKQDKALIPLLLLAILGIPLVLFLIGLIWGG---QWWML 74
Query 78 PLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----KWRVTPGVAATGN 133
P+G+ G + A IF RR +R VY++AEGQ GAA WA++NLR WR VA T
Sbjct 75 PIGIAAGVVAAMFIFTRRVERDVYKRAEGQQGAAGWAVENLRSGVGMTWRTKTAVAVTTQ 134
Query 134 LDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAK 193
+DAVHRVIG GV+ VGEGS R+KP+LAQ+KKR R+ VP+Y+II GNG+G+ P+AK
Sbjct 135 MDAVHRVIGLCGVVLVGEGSPHRLKPMLAQQKKRLNRVAPGVPVYEIITGNGEGQTPIAK 194
Query 194 LERHLTRLPANITVKQMDTVESRLAALGS--RAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
L+R L +LP N + + +R+ A+ + A G +PKGPLP A M + R RR+
Sbjct 195 LQRELVKLPRNYKKNDVAALAARIEAMDNVGNAPGGSLPKGPLPKGASMSGMNRRARRQ 253
>gi|19553411|ref|NP_601413.1| hypothetical protein NCgl2129 [Corynebacterium glutamicum ATCC
13032]
gi|62391049|ref|YP_226451.1| hypothetical protein cg2424 [Corynebacterium glutamicum ATCC
13032]
gi|21324981|dbj|BAB99603.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC
13032]
gi|41326388|emb|CAF20550.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length=260
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/239 (46%), Positives = 153/239 (65%), Gaps = 10/239 (4%)
Query 19 AARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG-VWAGGFTMFTMI 77
AA+KA ++ R+Q+WQ F +QRK+DK L+P ++ A L I +G +W G + M+
Sbjct 18 AAKKAQRKETRSQMWQVFNMQRKQDKALIPLLLLAILGIPLVLFLIGLIWGG---QWWML 74
Query 78 PLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----KWRVTPGVAATGN 133
P+G+ G + A IF RR +R VY++AEGQ GAA WA++NLR WR VA T
Sbjct 75 PIGIAAGVVAAMFIFTRRVERDVYKRAEGQQGAAGWAVENLRSGVGMTWRTKTAVAVTTQ 134
Query 134 LDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAK 193
+DAVHRVIG GV+ VGEGS R+KP+LAQ+KKR R+ VP+Y+II GNG+G+ P+AK
Sbjct 135 MDAVHRVIGLCGVVLVGEGSPHRLKPMLAQQKKRLNRVAPGVPVYEIITGNGEGQTPIAK 194
Query 194 LERHLTRLPANITVKQMDTVESRLAALGS--RAGAGVMPKGPLPTTAKMRSVQRTVRRK 250
L+R L +LP N + + +R+ A+ + A G +PKGPLP A M + R RR+
Sbjct 195 LQRELVKLPRNYKKNDVAALAARIEAMDNVGNAPGGSLPKGPLPKGASMSGMNRRARRQ 253
>gi|284991790|ref|YP_003410344.1| hypothetical protein Gobs_3371 [Geodermatophilus obscurus DSM
43160]
gi|284065035|gb|ADB75973.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=280
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 130/188 (70%), Gaps = 2/188 (1%)
Query 34 QAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFG 93
QA++L RK D +L M+ AF+ + + + G F +P+ +L GAL A ++FG
Sbjct 68 QAYSLTRKNDPKLPWVMLIAFIAVAAVIELIAILFG--APFLFLPIAILFGALAAMIVFG 125
Query 94 RRAQRTVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVGEGS 153
RRAQ + YR+ EGQ GAAAW L+ +RG W+V+ GVA T LDAVHRV GRPG+I VGEG
Sbjct 126 RRAQGSAYRQVEGQPGAAAWVLEGMRGDWQVSSGVAGTTQLDAVHRVTGRPGIILVGEGV 185
Query 154 AARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTRLPANITVKQMDTV 213
+RV+PLLAQEKKR AR+ GD PIYD++VG+ +VPL KL H+ +LP N++ +++ +
Sbjct 186 PSRVRPLLAQEKKRVARIAGDAPIYDVLVGDEASQVPLRKLSAHVMKLPRNLSGGELNAL 245
Query 214 ESRLAALG 221
RL+ALG
Sbjct 246 RKRLSALG 253
>gi|145296171|ref|YP_001138992.1| hypothetical protein cgR_2090 [Corynebacterium glutamicum R]
gi|140846091|dbj|BAF55090.1| hypothetical protein [Corynebacterium glutamicum R]
Length=260
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/229 (47%), Positives = 148/229 (65%), Gaps = 10/229 (4%)
Query 19 AARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG-VWAGGFTMFTMI 77
AA+KA +Q R+Q+WQ F +QRK+DK L+P ++ A L I +G +W G + M+
Sbjct 18 AAKKAQRKQTRSQMWQVFNMQRKQDKALIPLLLLAILGIPLVLFLIGLIWGG---QWWML 74
Query 78 PLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----KWRVTPGVAATGN 133
P+G+ G + A IF RR +R VY++AEGQ GAA WA++NLR WR VA T
Sbjct 75 PIGIAAGVVAAMFIFTRRVERDVYKRAEGQQGAAGWAVENLRSGVGMTWRTKTAVAVTTQ 134
Query 134 LDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAK 193
+DAVHRVIG GV+ VGEGS R+KP+LAQ+KKR R+ VP+Y+II GNG+G+ P+AK
Sbjct 135 MDAVHRVIGLCGVVLVGEGSPHRLKPMLAQQKKRLNRVAPGVPVYEIITGNGEGQTPIAK 194
Query 194 LERHLTRLPANITVKQMDTVESRLAALGS--RAGAGVMPKGPLPTTAKM 240
L+R L +LP N + + +R+ A+ + A G +PKGPLP A M
Sbjct 195 LQRELVKLPRNYKKNDVAALAARIEAMDNVGNAPGGSLPKGPLPKGASM 243
>gi|300858862|ref|YP_003783845.1| hypothetical protein cpfrc_01445 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686316|gb|ADK29238.1| hypothetical protein cpfrc_01445 [Corynebacterium pseudotuberculosis
FRC41]
Length=269
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/236 (44%), Positives = 148/236 (63%), Gaps = 8/236 (3%)
Query 19 AARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG-VWAGGFTMFTMI 77
AA++A RQ +QLWQAF +QRK+DK L+P M+G+ L + +G +W G + M+
Sbjct 31 AAKRAQRRQNWSQLWQAFNIQRKQDKALVPIMVGSILGLGLLFFLIGMLWNG---QWFML 87
Query 78 PLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGK----WRVTPGVAATGN 133
P G+LLG L+A IF RR Q +VY KAEGQ GAA WAL+NLR WR GVA T
Sbjct 88 PTGLLLGVLLAMFIFTRRLQNSVYEKAEGQAGAAGWALENLRSGVGIVWRTKTGVAVTKQ 147
Query 134 LDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAK 193
+D +HRVIG G++ VGEG+ ++PL+ Q+++R +RL VPI+++ VG+G+GEVPL K
Sbjct 148 MDVLHRVIGVCGIVLVGEGNKNHLRPLINQQRQRLSRLAPGVPIHEMFVGSGEGEVPLKK 207
Query 194 LERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRR 249
L+ L +L + + SR+ ++ + +PKGP+P K+ + R RR
Sbjct 208 LQSSLLKLDRQYKKNDVYEIASRIESMDNVQTNVGLPKGPIPKGGKISGMNRRARR 263
>gi|302206569|gb|ADL10911.1| Hypothetical protein CpC231_1441 [Corynebacterium pseudotuberculosis
C231]
gi|302331124|gb|ADL21318.1| Hypothetical protein Cp1002_1442 [Corynebacterium pseudotuberculosis
1002]
gi|308276812|gb|ADO26711.1| Putative membrane protein [Corynebacterium pseudotuberculosis
I19]
gi|341825252|gb|AEK92773.1| Hypothetical protein CpPAT10_1439 [Corynebacterium pseudotuberculosis
PAT10]
Length=256
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/236 (44%), Positives = 148/236 (63%), Gaps = 8/236 (3%)
Query 19 AARKAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVG-VWAGGFTMFTMI 77
AA++A RQ +QLWQAF +QRK+DK L+P M+G+ L + +G +W G + M+
Sbjct 18 AAKRAQRRQNWSQLWQAFNIQRKQDKALVPIMVGSILGLGLLFFLIGMLWNG---QWFML 74
Query 78 PLGVLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRGK----WRVTPGVAATGN 133
P G+LLG L+A IF RR Q +VY KAEGQ GAA WAL+NLR WR GVA T
Sbjct 75 PTGLLLGVLLAMFIFTRRLQNSVYEKAEGQAGAAGWALENLRSGVGIVWRTKTGVAVTKQ 134
Query 134 LDAVHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAK 193
+D +HRVIG G++ VGEG+ ++PL+ Q+++R +RL VPI+++ VG+G+GEVPL K
Sbjct 135 MDVLHRVIGVCGIVLVGEGNKNHLRPLINQQRQRLSRLAPGVPIHEMFVGSGEGEVPLKK 194
Query 194 LERHLTRLPANITVKQMDTVESRLAALGSRAGAGVMPKGPLPTTAKMRSVQRTVRR 249
L+ L +L + + SR+ ++ + +PKGP+P K+ + R RR
Sbjct 195 LQSSLLKLDRQYKKNDVYEIASRIESMDNVQTNVGLPKGPIPKGGKISGMNRRARR 250
>gi|38234217|ref|NP_939984.1| hypothetical protein DIP1642 [Corynebacterium diphtheriae NCTC
13129]
gi|38200479|emb|CAE50171.1| Putative membrane protein [Corynebacterium diphtheriae]
Length=257
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/234 (43%), Positives = 148/234 (64%), Gaps = 9/234 (3%)
Query 22 KAAARQRRAQLWQAFTLQRKEDKRLLPYMIGAFLLIVGASVGVGV-WAGGFTMFTMIPLG 80
+A RQ AQ+WQAF +QRK+DK L+P M+ AFL A +G+ W G + M+ G
Sbjct 21 RAQRRQNWAQIWQAFNIQRKQDKALIPIMLAAFLGTGLAFFLIGLLWNG---QWFMLVTG 77
Query 81 VLLGALVAFVIFGRRAQRTVYRKAEGQTGAAAWALDNLRG----KWRVTPGVAATGNLDA 136
++LGA +A +F RR Q +VY +AEGQ GAA WAL+N+R WR GVA T N+D
Sbjct 78 LILGAALAMFLFSRRLQASVYDRAEGQAGAAGWALENMRSGYGMAWRTKTGVAFTKNMDV 137
Query 137 VHRVIGRPGVIFVGEGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLER 196
+HR IG G++ VGEG+ + ++PL++Q++KR RL VP+++I +G+G+GEV L KL+
Sbjct 138 LHRTIGVCGIVLVGEGNKSHLRPLVSQQRKRLERLAPGVPVHEIYIGSGEGEVSLKKLQS 197
Query 197 HLTRLPANITVKQMDTVESRLAALGS-RAGAGVMPKGPLPTTAKMRSVQRTVRR 249
L +LP + ++ +R+ ++ S AG +PKGP+P KM + R RR
Sbjct 198 TLMKLPRVYKKNDVYSIANRIESMDSINAGGAALPKGPIPKGGKMSGMNRRARR 251
Lambda K H
0.321 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 358945203960
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40