BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2228c Length=364 Score E Sequences producing significant alignments: (Bits) Value gi|15609365|ref|NP_216744.1| bifunctional RNase H/acid phosphata... 724 0.0 gi|289758350|ref|ZP_06517728.1| bifunctional RNase H/acid phosph... 662 0.0 gi|240172442|ref|ZP_04751101.1| bifunctional RNase H/acid phosph... 624 6e-177 gi|308369661|ref|ZP_07418597.2| hypothetical protein TMBG_00777 ... 614 9e-174 gi|289762391|ref|ZP_06521769.1| conserved hypothetical protein [... 610 1e-172 gi|183983294|ref|YP_001851585.1| hypothetical protein MMAR_3304 ... 579 2e-163 gi|118617021|ref|YP_905353.1| bifunctional RNase H/acid phosphat... 578 5e-163 gi|15827864|ref|NP_302127.1| bifunctional RNase H/acid phosphata... 569 3e-160 gi|296166119|ref|ZP_06848564.1| phosphoglycerate mutase [Mycobac... 544 7e-153 gi|342857250|ref|ZP_08713906.1| bifunctional RNase H/acid phosph... 526 2e-147 gi|254774920|ref|ZP_05216436.1| bifunctional RNase H/acid phosph... 526 2e-147 gi|118466196|ref|YP_881419.1| bifunctional RNase H/acid phosphat... 525 7e-147 gi|41408078|ref|NP_960914.1| bifunctional RNase H/acid phosphata... 515 5e-144 gi|118467729|ref|YP_888582.1| bifunctional RNase H/acid phosphat... 512 4e-143 gi|145223479|ref|YP_001134157.1| bifunctional RNase H/acid phosp... 511 1e-142 gi|169628993|ref|YP_001702642.1| bifunctional RNase H/acid phosp... 510 1e-142 gi|108800308|ref|YP_640505.1| bifunctional RNase H/acid phosphat... 507 1e-141 gi|333990306|ref|YP_004522920.1| bifunctional RNase H/acid phosp... 505 5e-141 gi|120404586|ref|YP_954415.1| bifunctional RNase H/acid phosphat... 503 2e-140 gi|111018194|ref|YP_701166.1| bifunctional RNase H/acid phosphat... 464 7e-129 gi|333918915|ref|YP_004492496.1| phosphoglycerate mutase [Amycol... 454 1e-125 gi|226360320|ref|YP_002778098.1| bifunctional RNase H/acid phosp... 452 3e-125 gi|325677016|ref|ZP_08156687.1| phosphoglycerate mutase [Rhodoco... 446 4e-123 gi|312140237|ref|YP_004007573.1| rnase h domain phosphoglycerate... 441 8e-122 gi|226307145|ref|YP_002767105.1| ribonuclease H/acid phosphatase... 433 2e-119 gi|229490280|ref|ZP_04384122.1| phosphoglycerate mutase [Rhodoco... 432 3e-119 gi|54023608|ref|YP_117850.1| bifunctional RNase H/acid phosphata... 421 1e-115 gi|257054785|ref|YP_003132617.1| fructose-2,6-bisphosphatase [Sa... 409 5e-112 gi|25028689|ref|NP_738743.1| bifunctional RNase H/acid phosphata... 400 1e-109 gi|259507750|ref|ZP_05750650.1| phosphoglycerate mutase family p... 400 1e-109 gi|38234249|ref|NP_940016.1| bifunctional RNase H/acid phosphata... 397 1e-108 gi|334697308|gb|AEG82105.1| hypothetical protein CULC809_01573 [... 397 1e-108 gi|256375028|ref|YP_003098688.1| phosphoglycerate mutase [Actino... 397 1e-108 gi|300858913|ref|YP_003783896.1| hypothetical protein cpfrc_0149... 397 2e-108 gi|337291198|ref|YP_004630219.1| hypothetical protein CULC22_015... 396 2e-108 gi|134098170|ref|YP_001103831.1| putative bifunctional protein (... 387 2e-105 gi|300783100|ref|YP_003763391.1| bifunctional RNase H/acid phosp... 385 8e-105 gi|344044315|gb|EGV39993.1| bifunctional RNase H/acid phosphatas... 378 9e-103 gi|19553436|ref|NP_601438.1| bifunctional RNase H/acid phosphata... 377 1e-102 gi|145296194|ref|YP_001139015.1| bifunctional RNase H/acid phosp... 374 1e-101 gi|302524447|ref|ZP_07276789.1| bifunctional RNase H/acid phosph... 374 2e-101 gi|324998690|ref|ZP_08119802.1| bifunctional RNase H/acid phosph... 369 4e-100 gi|334563303|ref|ZP_08516294.1| bifunctional RNase H/acid phosph... 340 2e-91 gi|305681140|ref|ZP_07403947.1| ribonuclease HI [Corynebacterium... 340 3e-91 gi|269125916|ref|YP_003299286.1| phosphoglycerate mutase [Thermo... 339 5e-91 gi|339298765|gb|AEJ50875.1| bifunctional RNase H/acid phosphatas... 338 9e-91 gi|72162352|ref|YP_290009.1| bifunctional RNase H/acid phosphata... 338 1e-90 gi|225021833|ref|ZP_03711025.1| hypothetical protein CORMATOL_01... 336 4e-90 gi|336178893|ref|YP_004584268.1| phosphoglycerate mutase [Franki... 333 3e-89 gi|345014665|ref|YP_004817019.1| phosphoglycerate mutase [Strept... 333 4e-89 >gi|15609365|ref|NP_216744.1| bifunctional RNase H/acid phosphatase [Mycobacterium tuberculosis H37Rv] gi|15841722|ref|NP_336759.1| bifunctional RNase H/acid phosphatase [Mycobacterium tuberculosis CDC1551] gi|31793409|ref|NP_855902.1| bifunctional RNase H/acid phosphatase [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=364 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/364 (99%), Positives = 364/364 (100%), Gaps = 0/364 (0%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT Sbjct 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ Sbjct 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 Query 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV Sbjct 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 Query 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII Sbjct 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 Query 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQ 360 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQ Sbjct 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQ 360 Query 361 TGYL 364 TGYL Sbjct 361 TGYL 364 >gi|289758350|ref|ZP_06517728.1| bifunctional RNase H/acid phosphatase [Mycobacterium tuberculosis T85] gi|289713914|gb|EFD77926.1| bifunctional RNase H/acid phosphatase [Mycobacterium tuberculosis T85] Length=340 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/337 (98%), Positives = 332/337 (99%), Gaps = 0/337 (0%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT Sbjct 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ Sbjct 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 Query 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV Sbjct 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 Query 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII Sbjct 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 Query 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHL 337 VGYEGATVLVVSHVTPIKMLLRLALDAGSGV + Sbjct 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVFFFFFF 337 >gi|240172442|ref|ZP_04751101.1| bifunctional RNase H/acid phosphatase [Mycobacterium kansasii ATCC 12478] Length=374 Score = 624 bits (1610), Expect = 6e-177, Method: Compositional matrix adjust. Identities = 314/374 (84%), Positives = 333/374 (90%), Gaps = 10/374 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPGPAGYGAVVWT D STVLAESKQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVIIEADGGSRGNPGPAGYGAVVWTMDRSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VKLGATEA VLMDSKLVVEQM GRWKVKHPDL++L+ QAQALA FRRI+Y WVPR+RN Sbjct 61 VKLGATEATVLMDSKLVVEQMCGRWKVKHPDLVELHAQAQALARHFRRISYGWVPRSRNA 120 Query 121 YADRLANDAMDAAAQS----------AAADADPAKIVATESPTSPGWTGARGTPTRLLLL 170 YADRLAN+AMDAA ++ A ADP +ATESPT+PGWTG RG TRLLLL Sbjct 121 YADRLANEAMDAAVRTNRRGENTTVPVVAVADPPHKLATESPTAPGWTGRRGAATRLLLL 180 Query 171 RHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTA 230 RHGQTELS QRRYSGRGNP LNEVGWRQ G AA YLA+RGGIAAVVSSPLQRAYDTA TA Sbjct 181 RHGQTELSVQRRYSGRGNPALNEVGWRQAGLAARYLAQRGGIAAVVSSPLQRAYDTATTA 240 Query 231 ARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLR 290 ARAL L+V VDDDLVETDFGAWEG+TFAEAAERDPELHRRWL+DT TPPGGESFDDVL Sbjct 241 ARALGLEVTVDDDLVETDFGAWEGMTFAEAAERDPELHRRWLRDTGATPPGGESFDDVLL 300 Query 291 RVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYAD 350 RVRRGRDRII G+EGATVLVVSHVTPIKMLLRLALDAG+G+LYRLHLDLASLSIAEFYAD Sbjct 301 RVRRGRDRIIAGHEGATVLVVSHVTPIKMLLRLALDAGAGILYRLHLDLASLSIAEFYAD 360 Query 351 GASSVRLVNQTGYL 364 GASSVRLVNQTGYL Sbjct 361 GASSVRLVNQTGYL 374 >gi|308369661|ref|ZP_07418597.2| hypothetical protein TMBG_00777 [Mycobacterium tuberculosis SUMu002] gi|308370951|ref|ZP_07423329.2| hypothetical protein TMCG_00326 [Mycobacterium tuberculosis SUMu003] gi|308376951|ref|ZP_07440637.2| hypothetical protein TMHG_01420 [Mycobacterium tuberculosis SUMu008] 7 more sequence titles Length=308 Score = 614 bits (1583), Expect = 9e-174, Method: Compositional matrix adjust. Identities = 307/308 (99%), Positives = 308/308 (100%), Gaps = 0/308 (0%) Query 57 LDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR 116 +DDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR Sbjct 1 MDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR 60 Query 117 ARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTE 176 ARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTE Sbjct 61 ARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTE 120 Query 177 LSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALAL 236 LSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALAL Sbjct 121 LSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALAL 180 Query 237 DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGR 296 DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGR Sbjct 181 DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGR 240 Query 297 DRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVR 356 DRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVR Sbjct 241 DRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVR 300 Query 357 LVNQTGYL 364 LVNQTGYL Sbjct 301 LVNQTGYL 308 >gi|289762391|ref|ZP_06521769.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709897|gb|EFD73913.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=363 Score = 610 bits (1572), Expect = 1e-172, Method: Compositional matrix adjust. Identities = 351/351 (100%), Positives = 351/351 (100%), Gaps = 0/351 (0%) Query 14 NPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMD 73 NPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMD Sbjct 13 NPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMD 72 Query 74 SKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADRLANDAMDAA 133 SKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADRLANDAMDAA Sbjct 73 SKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADRLANDAMDAA 132 Query 134 AQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNE 193 AQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNE Sbjct 133 AQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNE 192 Query 194 VGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWE 253 VGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWE Sbjct 193 VGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWE 252 Query 254 GLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSH 313 GLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSH Sbjct 253 GLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSH 312 Query 314 VTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL 364 VTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL Sbjct 313 VTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL 363 >gi|183983294|ref|YP_001851585.1| hypothetical protein MMAR_3304 [Mycobacterium marinum M] gi|183176620|gb|ACC41730.1| conserved hypothetical protein [Mycobacterium marinum M] Length=374 Score = 579 bits (1493), Expect = 2e-163, Method: Compositional matrix adjust. Identities = 304/374 (82%), Positives = 326/374 (88%), Gaps = 10/374 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPGPAGYGAVVWTAD STVLAESKQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVIIEADGGSRGNPGPAGYGAVVWTADRSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VKLGATE +VLMDSKLVVEQM GRWKVKHPDL++L+ QA+ LA QFRRI+Y W+PRARN Sbjct 61 VKLGATEVSVLMDSKLVVEQMCGRWKVKHPDLVELHGQARELAGQFRRISYAWIPRARNA 120 Query 121 YADRLANDAMDAAAQS----------AAADADPAKIVATESPTSPGWTGARGTPTRLLLL 170 +ADRLAN+AMDAA ++ AA ADPA ++P +PGWTG R T TRLLLL Sbjct 121 HADRLANEAMDAAVRTNRRGEPGTVAVAAVADPANTAPVQTPAAPGWTGRRDTATRLLLL 180 Query 171 RHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTA 230 RHGQTELS QRRYSGRGNP LNEVGWRQ G AA Y+A RGGIAAVVSSPLQRAYDTA TA Sbjct 181 RHGQTELSVQRRYSGRGNPALNEVGWRQAGLAARYIAHRGGIAAVVSSPLQRAYDTATTA 240 Query 231 ARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLR 290 ARAL LDV VD+DLVETDFG WEG+TFAEAA RDP+LH RWL DTSITPPGGESFD+VLR Sbjct 241 ARALGLDVTVDEDLVETDFGDWEGMTFAEAANRDPDLHHRWLNDTSITPPGGESFDEVLR 300 Query 291 RVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYAD 350 RVRRGRDR+I YEG TVLVVSHVTPIKMLLRLALD GS VLYRLHLDLASLSIAEFYAD Sbjct 301 RVRRGRDRMISRYEGTTVLVVSHVTPIKMLLRLALDVGSEVLYRLHLDLASLSIAEFYAD 360 Query 351 GASSVRLVNQTGYL 364 GASSVRLVNQTGYL Sbjct 361 GASSVRLVNQTGYL 374 >gi|118617021|ref|YP_905353.1| bifunctional RNase H/acid phosphatase [Mycobacterium ulcerans Agy99] gi|118569131|gb|ABL03882.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=374 Score = 578 bits (1489), Expect = 5e-163, Method: Compositional matrix adjust. Identities = 303/374 (82%), Positives = 326/374 (88%), Gaps = 10/374 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPGPAGYGAVVWTAD STVLAESKQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVIIEADGGSRGNPGPAGYGAVVWTADRSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VKLGATE +VLMDSKLVVEQM GRWKVKHPDL++L+ QA+ LA QFRRI+Y W+PRARN Sbjct 61 VKLGATEVSVLMDSKLVVEQMCGRWKVKHPDLVELHGQARELAGQFRRISYAWIPRARNA 120 Query 121 YADRLANDAMDAAAQS----------AAADADPAKIVATESPTSPGWTGARGTPTRLLLL 170 +AD+LAN+AMDAA ++ AA ADPA ++P +PGWTG R T TRLLLL Sbjct 121 HADQLANEAMDAAVRTNRRGEPGTVAVAAVADPANTAPVQTPAAPGWTGRRDTATRLLLL 180 Query 171 RHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTA 230 RHGQTELS QRRYSGRGNP LNEVGWRQ G AA Y+A RGGIAAVVSSPLQRAYDTA TA Sbjct 181 RHGQTELSVQRRYSGRGNPALNEVGWRQAGLAARYIAHRGGIAAVVSSPLQRAYDTATTA 240 Query 231 ARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLR 290 ARAL LDV VD+DLVETDFG WEG+TFAEAA RDP+LH RWL DTSITPPGGESFD+VLR Sbjct 241 ARALGLDVTVDEDLVETDFGDWEGMTFAEAANRDPDLHHRWLNDTSITPPGGESFDEVLR 300 Query 291 RVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYAD 350 RVRRGRDR+I YEG TVLVVSHVTPIKMLLRLALD GS VLYRLHLDLASLSIAEFYAD Sbjct 301 RVRRGRDRMISRYEGTTVLVVSHVTPIKMLLRLALDVGSEVLYRLHLDLASLSIAEFYAD 360 Query 351 GASSVRLVNQTGYL 364 GASSVRLVNQTGYL Sbjct 361 GASSVRLVNQTGYL 374 >gi|15827864|ref|NP_302127.1| bifunctional RNase H/acid phosphatase [Mycobacterium leprae TN] gi|221230341|ref|YP_002503757.1| bifunctional RNase H/acid phosphatase [Mycobacterium leprae Br4923] gi|3150239|emb|CAA19219.1| hypothetical protein MLCB1243.38 [Mycobacterium leprae] gi|13093416|emb|CAC30588.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933448|emb|CAR71732.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=371 Score = 569 bits (1467), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 285/371 (77%), Positives = 309/371 (84%), Gaps = 7/371 (1%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPGPAGYGAVVW AD S VL E+KQAIGRATNNVAEYR LIAGLDDA Sbjct 1 MKVIIEADGGSRGNPGPAGYGAVVWIADRSAVLTETKQAIGRATNNVAEYRALIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VK+GATEA VLMDSKLVVEQMSGRWKVKHPDL++LYV AQ LAS+ ++Y W+PR RN+ Sbjct 61 VKMGATEAEVLMDSKLVVEQMSGRWKVKHPDLIELYVHAQTLASRLASVSYTWIPRTRNS 120 Query 121 YADRLANDAMDAAA-------QSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHG 173 ADRLAN+AMDAA+ Q+A A K VA ES T+PGWTGARGTPTRLLLLRHG Sbjct 121 RADRLANEAMDAASCAEGRVDQAATQLAQSTKAVAKESQTAPGWTGARGTPTRLLLLRHG 180 Query 174 QTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARA 233 QTELS QRRYSGRGNP LN VGWRQ AAA Y A+RGGIA VVSSPLQRAYDTA T A Sbjct 181 QTELSVQRRYSGRGNPALNNVGWRQARAAARYFAQRGGIAGVVSSPLQRAYDTAATVADL 240 Query 234 LALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVR 293 L ++ VDDDL+E DFGAWEGLTFAEAA RDP+LH WL DT+ PPGGESFDDVL RV Sbjct 241 LGANLTVDDDLIEIDFGAWEGLTFAEAAARDPQLHHCWLHDTATLPPGGESFDDVLGRVC 300 Query 294 RGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGAS 353 R RII Y+G TVLVVSHVTPIKMLLRLALDAG+G+LYRLHLDL SLSIAEFY DGAS Sbjct 301 SARARIIAEYQGETVLVVSHVTPIKMLLRLALDAGAGILYRLHLDLGSLSIAEFYPDGAS 360 Query 354 SVRLVNQTGYL 364 SVRLVNQTGYL Sbjct 361 SVRLVNQTGYL 371 >gi|296166119|ref|ZP_06848564.1| phosphoglycerate mutase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898528|gb|EFG78089.1| phosphoglycerate mutase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=364 Score = 544 bits (1402), Expect = 7e-153, Method: Compositional matrix adjust. Identities = 281/364 (78%), Positives = 315/364 (87%), Gaps = 0/364 (0%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVW D ST LAE+KQAIG ATNNVAEYRGL+AGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWAEDRSTALAETKQAIGHATNNVAEYRGLLAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +++GATEAAV +DSKL+VEQMSGRWKVKHPDL++L+ QA+ LA++F RI+Y W+PR RN+ Sbjct 61 LRVGATEAAVFLDSKLLVEQMSGRWKVKHPDLVELHGQARKLAARFDRISYTWIPRDRNS 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 YADRLAN+AMDAAA +A+ A SP +PGWTGARGTPTRLLLLRHGQTELS Q Sbjct 121 YADRLANEAMDAAAAGDPVEAERPAEAAAPSPQAPGWTGARGTPTRLLLLRHGQTELSVQ 180 Query 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 RRYSGRGNP L EVG RQ AAA YLA+RGGI+AV +SPLQRAYDTA AA+AL LDV V Sbjct 181 RRYSGRGNPALTEVGRRQADAAARYLAQRGGISAVFASPLQRAYDTAARAAKALGLDVTV 240 Query 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 DDDL+ETDFGAWEGLTF EAAERDPELH RWL+DT TPPGGESFDDVL RV R+RI+ Sbjct 241 DDDLIETDFGAWEGLTFGEAAERDPELHGRWLRDTGTTPPGGESFDDVLDRVVAARERIV 300 Query 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQ 360 ++G TVLVVSHVTPIKMLLRLAL+AG G+LYRLHLDLASLSIAEFY+DGASSVRLVNQ Sbjct 301 AAHQGTTVLVVSHVTPIKMLLRLALEAGPGILYRLHLDLASLSIAEFYSDGASSVRLVNQ 360 Query 361 TGYL 364 T YL Sbjct 361 TAYL 364 >gi|342857250|ref|ZP_08713906.1| bifunctional RNase H/acid phosphatase [Mycobacterium colombiense CECT 3035] gi|342134583|gb|EGT87749.1| bifunctional RNase H/acid phosphatase [Mycobacterium colombiense CECT 3035] Length=375 Score = 526 bits (1355), Expect = 2e-147, Method: Compositional matrix adjust. Identities = 281/375 (75%), Positives = 318/375 (85%), Gaps = 11/375 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWT D +TVLAE+KQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTEDRTTVLAEAKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 + LGATEAAV +DSKL+VEQMSGRWKVKHPDL++L+ +A+ A +F RI+Y W+PRARNT Sbjct 61 LNLGATEAAVYLDSKLLVEQMSGRWKVKHPDLIELHAEARDRARRFARISYSWIPRARNT 120 Query 121 YADRLANDAMDAAAQSAAA--DADPAKIVA---------TESPTSPGWTGARGTPTRLLL 169 +ADRLAN+AMDAAA+++ + +PA + A +P+ PGWTGARG PTRLLL Sbjct 121 HADRLANEAMDAAAEASGSAEKPEPAPLSAPVEKPEPVAAPAPSPPGWTGARGAPTRLLL 180 Query 170 LRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVT 229 LRHGQTELS RRYSGRGNP L EVG RQ AAA YLA+RGGI+ V +SPLQRAYDTA Sbjct 181 LRHGQTELSVHRRYSGRGNPALTEVGRRQADAAARYLAQRGGISTVFASPLQRAYDTAAA 240 Query 230 AARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVL 289 AA+AL LDV VDDDL+ETDFGAWEGLTF EAAERDPELH RWL+DTS PPGGESFD V Sbjct 241 AAKALGLDVTVDDDLIETDFGAWEGLTFTEAAERDPELHGRWLRDTSTAPPGGESFDAVA 300 Query 290 RRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYA 349 RV R RDRI+ ++G+TVLVVSHVTPIKMLLR ALDAG+G+LYRLHLDLASLSIAEFY+ Sbjct 301 ERVSRFRDRIVAAHQGSTVLVVSHVTPIKMLLREALDAGAGILYRLHLDLASLSIAEFYS 360 Query 350 DGASSVRLVNQTGYL 364 DGASSVRLVNQT YL Sbjct 361 DGASSVRLVNQTAYL 375 >gi|254774920|ref|ZP_05216436.1| bifunctional RNase H/acid phosphatase [Mycobacterium avium subsp. avium ATCC 25291] Length=383 Score = 526 bits (1355), Expect = 2e-147, Method: Compositional matrix adjust. Identities = 280/383 (74%), Positives = 309/383 (81%), Gaps = 19/383 (4%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWT D TVLAE+KQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTPDRGTVLAENKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +KLGATEA V +DSKL+VEQMSGRWKVKHPDL++L+ QA+ LA++F RI+Y W+PR RN+ Sbjct 61 LKLGATEAEVYLDSKLLVEQMSGRWKVKHPDLIELHAQARGLAARFDRISYSWIPRERNS 120 Query 121 YADRLAN-------------------DAMDAAAQSAAADADPAKIVATESPTSPGWTGAR 161 +ADRLAN + + A QS D K A SP +PGWTGAR Sbjct 121 HADRLANEAMDAAAAATGTAEKPEPAEKLGRAEQSDPTAVDAGKTAAAPSPAAPGWTGAR 180 Query 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQ 221 GTPTRLLLLRHGQTELS QRRYSGRGNP L E G RQ AAA YLA RGGI+AV +SPLQ Sbjct 181 GTPTRLLLLRHGQTELSVQRRYSGRGNPALTETGRRQADAAARYLAARGGISAVFASPLQ 240 Query 222 RAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPG 281 RAYDTA AA+AL LDV VDDDL+ETDFGAWEGLTF EAAERDP LHRRWL+DTS PPG Sbjct 241 RAYDTAAVAAKALGLDVTVDDDLIETDFGAWEGLTFGEAAERDPGLHRRWLRDTSTAPPG 300 Query 282 GESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLAS 341 GESFD V RV R R +II +G+TVLVVSHVTPIKMLLR ALDAG G+LYRLHLDLAS Sbjct 301 GESFDSVAERVSRVRQKIIAAQQGSTVLVVSHVTPIKMLLREALDAGPGILYRLHLDLAS 360 Query 342 LSIAEFYADGASSVRLVNQTGYL 364 LSIAEFY+DGA+SVRLVNQTGYL Sbjct 361 LSIAEFYSDGAASVRLVNQTGYL 383 >gi|118466196|ref|YP_881419.1| bifunctional RNase H/acid phosphatase [Mycobacterium avium 104] gi|118167483|gb|ABK68380.1| phosphoglycerate mutase [Mycobacterium avium 104] Length=383 Score = 525 bits (1351), Expect = 7e-147, Method: Compositional matrix adjust. Identities = 284/383 (75%), Positives = 312/383 (82%), Gaps = 19/383 (4%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWT D TVLAE+KQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTPDRGTVLAENKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +KLGATEA V +DSKL+VEQMSGRWKVKHPDL++L+ QA+ LA++F RI+Y W+PR RN+ Sbjct 61 LKLGATEAEVYLDSKLLVEQMSGRWKVKHPDLIELHAQARGLAARFDRISYSWIPRERNS 120 Query 121 YADRLANDAMDA-------------------AAQSAAADADPAKIVATESPTSPGWTGAR 161 +ADRLAN+AMDA A QS D K A SP +PGWTGAR Sbjct 121 HADRLANEAMDAAAAATGTAEKPEPAEKPGRAEQSDPTAVDAGKTAAAPSPAAPGWTGAR 180 Query 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQ 221 GTPTRLLLLRHGQTELS QRRYSGRGNP L E G RQ AAA YLA RGGI+AV +SPLQ Sbjct 181 GTPTRLLLLRHGQTELSVQRRYSGRGNPALTETGRRQADAAARYLAARGGISAVFASPLQ 240 Query 222 RAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPG 281 RAYDTA AA+AL LDV VDDDL+ETDFGAWEGLTF EAAERDP LHRRWL+DTS PPG Sbjct 241 RAYDTAAVAAKALGLDVTVDDDLIETDFGAWEGLTFGEAAERDPGLHRRWLRDTSTAPPG 300 Query 282 GESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLAS 341 GESFD V RV R R +II +G+TVLVVSHVTPIKMLLR ALDAG G+LYRLHLDLAS Sbjct 301 GESFDSVAERVSRVRQKIIAAQQGSTVLVVSHVTPIKMLLREALDAGPGILYRLHLDLAS 360 Query 342 LSIAEFYADGASSVRLVNQTGYL 364 LSIAEFY+DGA+SVRLVNQTGYL Sbjct 361 LSIAEFYSDGAASVRLVNQTGYL 383 >gi|41408078|ref|NP_960914.1| bifunctional RNase H/acid phosphatase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396433|gb|AAS04297.1| hypothetical protein MAP_1980c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461839|gb|EGO40695.1| fructose-2,6-bisphosphatase [Mycobacterium avium subsp. paratuberculosis S397] Length=377 Score = 515 bits (1326), Expect = 5e-144, Method: Compositional matrix adjust. Identities = 276/378 (74%), Positives = 309/378 (82%), Gaps = 15/378 (3%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWT D TVLAE+KQAIGRATNNVAEYRGL+AGL DA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTPDRGTVLAENKQAIGRATNNVAEYRGLLAGLGDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +KLGATEA V +DSKL+VEQMSGRWKVKHPDL++L+ QA++LA++F RI+Y W+PR RN+ Sbjct 61 LKLGATEAEVYLDSKLLVEQMSGRWKVKHPDLIELHAQARSLAARFDRISYTWIPRERNS 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSP--------------GWTGARGTPTR 166 +ADRLAN+AMDAAA + P ++ PT+ GWTGARGTPTR Sbjct 121 HADRLANEAMDAAAAATGTAEKPGPAEQSD-PTAADAGKTAAAPSPAAPGWTGARGTPTR 179 Query 167 LLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDT 226 LLLLRHGQTELS QRRYSGRGNP L E G RQ AAA YLA RGGI+AV +SPLQRAYDT Sbjct 180 LLLLRHGQTELSVQRRYSGRGNPALTETGRRQADAAARYLAARGGISAVFASPLQRAYDT 239 Query 227 AVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFD 286 A A+AL LDV VDDDL+ETDFGAWEGLTF EAAERDP LHRRWL+DTS PPGGESFD Sbjct 240 AAVVAKALGLDVTVDDDLIETDFGAWEGLTFGEAAERDPGLHRRWLRDTSTAPPGGESFD 299 Query 287 DVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAE 346 RV R R +II +G+TVLVVSHVTPIKMLLR ALDAG G+LYRLHLDLASLSIAE Sbjct 300 SAAERVSRVRQKIIAAQQGSTVLVVSHVTPIKMLLREALDAGPGILYRLHLDLASLSIAE 359 Query 347 FYADGASSVRLVNQTGYL 364 FY+DGA+SVRLVNQTGYL Sbjct 360 FYSDGAASVRLVNQTGYL 377 >gi|118467729|ref|YP_888582.1| bifunctional RNase H/acid phosphatase [Mycobacterium smegmatis str. MC2 155] gi|118169016|gb|ABK69912.1| phosphoglycerate mutase [Mycobacterium smegmatis str. MC2 155] Length=365 Score = 512 bits (1318), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 264/369 (72%), Positives = 303/369 (83%), Gaps = 9/369 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV++EADGGSRGNPGPAGYGAVV+ ADH+TVLAE K+AIGRATNNVAEYRGLIAGL+ A Sbjct 1 MKVLVEADGGSRGNPGPAGYGAVVYDADHATVLAERKEAIGRATNNVAEYRGLIAGLEAA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 + GATE AV MDSKLV+EQM GRW+VKHPDL++L +A ALA+ F ++Y W+PR RN+ Sbjct 61 AETGATEVAVSMDSKLVIEQMCGRWRVKHPDLIELQRRAAALAAGFDHVDYTWIPRERNS 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSP-----GWTGARGTPTRLLLLRHGQT 175 +ADRLAN+AMDAAA A P K ++ P +P GW+G G PTRL LLRHGQT Sbjct 121 HADRLANEAMDAAAGIAV----PDKASESDDPPAPAKNSVGWSGVTGAPTRLFLLRHGQT 176 Query 176 ELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALA 235 ELS RRYSGRGNP L E G RQ AAA YL RGGI+AVV+SPLQRAYDTA AA+AL Sbjct 177 ELSVDRRYSGRGNPALTEEGRRQADAAARYLGERGGISAVVTSPLQRAYDTAAAAAKALG 236 Query 236 LDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRG 295 LDV VDDDL+ETDFGAWEGLTFAEAA+RDP++HRRWL+DTS+ PPGGESFD V RVRR Sbjct 237 LDVTVDDDLIETDFGAWEGLTFAEAAQRDPDVHRRWLRDTSVEPPGGESFDAVAHRVRRA 296 Query 296 RDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSV 355 R+RII + +TVLVVSHVTPIK +LRLALDAG G+LYRLHLDLASLSIAEFYADG S+V Sbjct 297 RNRIIAEHGASTVLVVSHVTPIKTILRLALDAGEGILYRLHLDLASLSIAEFYADGGSAV 356 Query 356 RLVNQTGYL 364 RLVNQT YL Sbjct 357 RLVNQTAYL 365 >gi|145223479|ref|YP_001134157.1| bifunctional RNase H/acid phosphatase [Mycobacterium gilvum PYR-GCK] gi|315443840|ref|YP_004076719.1| fructose-2,6-bisphosphatase [Mycobacterium sp. Spyr1] gi|145215965|gb|ABP45369.1| Phosphoglycerate mutase [Mycobacterium gilvum PYR-GCK] gi|315262143|gb|ADT98884.1| fructose-2,6-bisphosphatase [Mycobacterium sp. Spyr1] Length=356 Score = 511 bits (1315), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 258/365 (71%), Positives = 297/365 (82%), Gaps = 10/365 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV++E DGGSRGNPGPAGYGAVVW+AD +VLAE++ AIG ATNNVAEYRGLIAGL+ A Sbjct 1 MKVIVECDGGSRGNPGPAGYGAVVWSADRESVLAEARSAIGTATNNVAEYRGLIAGLESA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 + GATE V MDSKL+VEQM+GRW+VKHPDL L+ QA LA +F I Y W+PR +N+ Sbjct 61 AQTGATEVEVRMDSKLIVEQMAGRWRVKHPDLAALHRQAADLARRFEHITYSWIPREQNS 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSP-GWTGARGTPTRLLLLRHGQTELSE 179 YADRLAN+AMDAAA +A P ++V T+P GWTGA+G PTRLLLLRHGQT LS Sbjct 121 YADRLANEAMDAAA----GEATPTEVV-----TNPAGWTGAKGAPTRLLLLRHGQTPLSV 171 Query 180 QRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVV 239 +RRYSGRGNP L E+G RQ GAAA YL RGGI AV++SPLQRAYDTA AA L DVV Sbjct 172 ERRYSGRGNPELTELGSRQAGAAAKYLGDRGGIDAVIASPLQRAYDTAAAAASTLGRDVV 231 Query 240 VDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRI 299 VDDDL+ETDFGAWEGLTF+EA++RDPELHRRWL+DTS+ PPGGESFD V RV R + RI Sbjct 232 VDDDLIETDFGAWEGLTFSEASQRDPELHRRWLKDTSVPPPGGESFDAVATRVHRAQRRI 291 Query 300 IVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVN 359 + + G TVL+VSHVTPIK LLRLALDAG +LYRLHLDLASLSIAEFY DGA+SVRLVN Sbjct 292 VEEHAGQTVLIVSHVTPIKTLLRLALDAGPAMLYRLHLDLASLSIAEFYPDGAASVRLVN 351 Query 360 QTGYL 364 QT YL Sbjct 352 QTAYL 356 >gi|169628993|ref|YP_001702642.1| bifunctional RNase H/acid phosphatase [Mycobacterium abscessus ATCC 19977] gi|169240960|emb|CAM61988.1| Putative phosphoglycerate mutase [Mycobacterium abscessus] Length=367 Score = 510 bits (1314), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 262/368 (72%), Positives = 294/368 (80%), Gaps = 6/368 (1%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV++EADGGSRGNPG AGYGAVV++ DH TVL E+ AIG ATNNVAEYRGLIAGL +A Sbjct 1 MKVLVEADGGSRGNPGLAGYGAVVFSPDHQTVLGEACDAIGHATNNVAEYRGLIAGLAEA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE +V MDSKLVVEQMSGRWKVKHPDL+ LY QA A QF ++Y W+PR RN Sbjct 61 ARLGATEVSVSMDSKLVVEQMSGRWKVKHPDLITLYQQAVTAAMQFESVDYTWIPRERNK 120 Query 121 YADRLANDAMDAAAQSAAADADPAKI--VATESP--TSPGWTGARGTPTRLLLLRHGQTE 176 +ADRLAN+AMD A S P +I + P T+PGWTGARG PTR+LLLRHGQTE Sbjct 121 HADRLANEAMDRA--SGIEPKKPKEIAEIKETKPADTAPGWTGARGKPTRMLLLRHGQTE 178 Query 177 LSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALAL 236 LS QRRYSGRGNP L E+G Q AA YLA RGGIAAV+SSPL RA +TA AA AL + Sbjct 179 LSVQRRYSGRGNPELTELGREQAARAARYLASRGGIAAVISSPLSRAKETAAAAAGALGV 238 Query 237 DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGR 296 + VDDDL+ETDFG WEGLTF+EA+ERDPELHR+WL DTSITPP GESFD V RVRR R Sbjct 239 PLTVDDDLIETDFGKWEGLTFSEASERDPELHRQWLSDTSITPPEGESFDTVHHRVRRAR 298 Query 297 DRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVR 356 +RII Y GATVLVVSHVTPIK LLRLALDAG VLYRLHLDLASLSIAEFY+DG +SVR Sbjct 299 NRIIAEYGGATVLVVSHVTPIKTLLRLALDAGPSVLYRLHLDLASLSIAEFYSDGPASVR 358 Query 357 LVNQTGYL 364 LVN+T YL Sbjct 359 LVNETSYL 366 >gi|108800308|ref|YP_640505.1| bifunctional RNase H/acid phosphatase [Mycobacterium sp. MCS] gi|119869436|ref|YP_939388.1| bifunctional RNase H/acid phosphatase [Mycobacterium sp. KMS] gi|126435931|ref|YP_001071622.1| bifunctional RNase H/acid phosphatase [Mycobacterium sp. JLS] gi|108770727|gb|ABG09449.1| Phosphoglycerate mutase [Mycobacterium sp. MCS] gi|119695525|gb|ABL92598.1| Phosphoglycerate mutase [Mycobacterium sp. KMS] gi|126235731|gb|ABN99131.1| Phosphoglycerate mutase [Mycobacterium sp. JLS] Length=365 Score = 507 bits (1305), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 261/365 (72%), Positives = 301/365 (83%), Gaps = 1/365 (0%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV++EADGGSRGNPGPAGYG+VVW+ D S+VLAE+KQ+IGRATNNVAEYRGLIAGL++A Sbjct 1 MKVLVEADGGSRGNPGPAGYGSVVWSEDRSSVLAEAKQSIGRATNNVAEYRGLIAGLEEA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +GATE AV MDSKL+VEQM+GRW+VKHPDL+ LY +A+ LA F R+ Y W+PRA N Sbjct 61 ANVGATEVAVSMDSKLIVEQMAGRWRVKHPDLIPLYQRARELAEGFDRVTYSWIPRAANA 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSP-GWTGARGTPTRLLLLRHGQTELSE 179 ADRLAN+AMDAA A +T +PTSP GWTGARG PTR LLLRHGQTELS Sbjct 121 RADRLANEAMDAAQGIDPPPRTAAPAASTHTPTSPAGWTGARGEPTRFLLLRHGQTELSV 180 Query 180 QRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVV 239 +RRYSGRGNP L E+G Q GAAA YLA RGGI AV++SPLQRAYDTA AA+ L LDV Sbjct 181 ERRYSGRGNPALTELGRSQAGAAAAYLAGRGGIDAVITSPLQRAYDTATAAAKTLGLDVT 240 Query 240 VDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRI 299 VD+DL+ETDFGAWEGLTF EA++RDPELH RWL+DTS+ PPGGESFD V RVRR R+RI Sbjct 241 VDEDLIETDFGAWEGLTFGEASQRDPELHGRWLRDTSVDPPGGESFDTVAHRVRRARNRI 300 Query 300 IVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVN 359 I + +TVLVVSHVTPIK +LRLAL+AG G+LYRLHLDLASLSIAEFY DG SSVRLVN Sbjct 301 IADHGASTVLVVSHVTPIKTMLRLALNAGEGILYRLHLDLASLSIAEFYPDGGSSVRLVN 360 Query 360 QTGYL 364 QT +L Sbjct 361 QTAHL 365 >gi|333990306|ref|YP_004522920.1| bifunctional RNase H/acid phosphatase [Mycobacterium sp. JDM601] gi|333486274|gb|AEF35666.1| bifunctional RNase H/acid phosphatase [Mycobacterium sp. JDM601] Length=369 Score = 505 bits (1300), Expect = 5e-141, Method: Compositional matrix adjust. Identities = 261/369 (71%), Positives = 303/369 (83%), Gaps = 5/369 (1%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVV+EADGGSRGNPGPAGYG+VVW+AD + VLAE+K +IG ATNNVAEYRGL+AGL +A Sbjct 1 MKVVVEADGGSRGNPGPAGYGSVVWSADRAEVLAETKGSIGVATNNVAEYRGLVAGLTEA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGA E AV MDSKLVVEQM+GRWKVKHPDL+ L+ +A+ LA++F + Y W+PR +N+ Sbjct 61 ARLGAAEVAVFMDSKLVVEQMAGRWKVKHPDLIPLHTRARELAAKFDHVRYNWIPREKNS 120 Query 121 YADRLANDAMDAAAQ-SAAADADPAK----IVATESPTSPGWTGARGTPTRLLLLRHGQT 175 +ADRLAN+AMDAAA+ S A +P + PT+PGWTGA GTPTRLLLLRHGQT Sbjct 121 HADRLANEAMDAAAKGSPPAIGEPMAENPGKPGPDRPTAPGWTGATGTPTRLLLLRHGQT 180 Query 176 ELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALA 235 ELS QRRYSG GNP L + G RQ AAA +LA+RGGI+ V+SSPLQR +DTA AA+ L Sbjct 181 ELSVQRRYSGCGNPELTDTGRRQADAAARFLAQRGGISTVISSPLQRCHDTATAAAKLLR 240 Query 236 LDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRG 295 LDV VD+DL+ETDFGAWEGLTFAEAA RDPELHRRWL DT+ PPGGESFD V RRVRR Sbjct 241 LDVAVDEDLIETDFGAWEGLTFAEAAARDPELHRRWLTDTATEPPGGESFDAVQRRVRRA 300 Query 296 RDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSV 355 RDRII + G TVLVVSHVTPIK +LRLALDAG +LYRLHLDLASLSIAEF+ADG +SV Sbjct 301 RDRIIAEHAGTTVLVVSHVTPIKTMLRLALDAGPAILYRLHLDLASLSIAEFFADGPASV 360 Query 356 RLVNQTGYL 364 RLVNQT YL Sbjct 361 RLVNQTAYL 369 >gi|120404586|ref|YP_954415.1| bifunctional RNase H/acid phosphatase [Mycobacterium vanbaalenii PYR-1] gi|119957404|gb|ABM14409.1| Phosphoglycerate mutase [Mycobacterium vanbaalenii PYR-1] Length=369 Score = 503 bits (1295), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 255/369 (70%), Positives = 300/369 (82%), Gaps = 5/369 (1%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 ++VV+EADGGSRGNPGPAGYGAVV +AD +VLAE+ AIG ATNNVAEYRGLIAGL+ A Sbjct 1 MRVVVEADGGSRGNPGPAGYGAVVVSADRVSVLAETSSAIGTATNNVAEYRGLIAGLEAA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE VLMDSKLVVEQMSGRW+V+HP L L+ QA+ L +F+R++Y WVPRA+N+ Sbjct 61 AELGATEVEVLMDSKLVVEQMSGRWRVRHPSLAPLHQQARDLERRFQRVSYRWVPRAQNS 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVA----TESPTSP-GWTGARGTPTRLLLLRHGQT 175 ADRLAN+AMDAA + A + A +E T+P GWTGA+G PTRLLLLRHGQT Sbjct 121 RADRLANEAMDAAGGGSMDAAGGGSMDAAGGGSEVVTNPAGWTGAKGAPTRLLLLRHGQT 180 Query 176 ELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALA 235 ELS QRRYSGRGNP L E+G +Q AAA YL ++GGI AV+SSPLQRA+DTA A++A+ Sbjct 181 ELSVQRRYSGRGNPELTELGIQQADAAARYLGQKGGIDAVISSPLQRAHDTAAAASKAMG 240 Query 236 LDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRG 295 LDV VDDDL+ETDFGAWEGLTF EAA+RDPELH RWL+DTS+ PPGGESFD V RV R Sbjct 241 LDVEVDDDLIETDFGAWEGLTFQEAAQRDPELHLRWLRDTSVPPPGGESFDAVAARVSRA 300 Query 296 RDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSV 355 + R+I + G T+L+VSHVTPIK LLR+ALDAG +LYRLHLDLASLSIAEFY DGA+SV Sbjct 301 QQRLIAKHPGQTLLLVSHVTPIKTLLRMALDAGPAILYRLHLDLASLSIAEFYPDGAASV 360 Query 356 RLVNQTGYL 364 RLVNQT YL Sbjct 361 RLVNQTTYL 369 >gi|111018194|ref|YP_701166.1| bifunctional RNase H/acid phosphatase [Rhodococcus jostii RHA1] gi|110817724|gb|ABG93008.1| probable alpha-ribazole phosphatase [Rhodococcus jostii RHA1] Length=368 Score = 464 bits (1195), Expect = 7e-129, Method: Compositional matrix adjust. Identities = 238/364 (66%), Positives = 276/364 (76%), Gaps = 1/364 (0%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 +VV+EADGGSRGNPGPAGYGAVV+ A + TVLAE K+++G ATNNVAEYRGLIAGLD A Sbjct 5 RVVVEADGGSRGNPGPAGYGAVVFDAANGTVLAERKESLGIATNNVAEYRGLIAGLDAAA 64 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 +LGA+E V MDSKLVVEQMSGRWKVKHPD++ L QA LA QF + Y W+PRA N + Sbjct 65 ELGASEVDVRMDSKLVVEQMSGRWKVKHPDMIPLQRQASTLARQFDSVTYTWIPRAENAH 124 Query 122 ADRLANDAMDAAAQSAAADADPAKIVATES-PTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 ADRLAN+AMD A A + +PA + + ++ P +PGW G PTR+LLLRHGQT LS Sbjct 125 ADRLANEAMDGADGDADVEPEPAAVPSEKTTPAAPGWMDTTGAPTRMLLLRHGQTPLSVD 184 Query 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 RRYSGRGNP L E+G Q AA A GIAAVVSSPL RA TA AA+ L L V V Sbjct 185 RRYSGRGNPALTEIGQAQANGAAVRFAGNNGIAAVVSSPLGRAQQTATAAAKVLGLPVTV 244 Query 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 + L ETDFG WEGLTF EAAERDPELHR+WL DTS+ PP GESFD+V R+ + RD + Sbjct 245 HEGLTETDFGEWEGLTFREAAERDPELHRKWLSDTSVCPPAGESFDEVRERILKVRDDLT 304 Query 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQ 360 Y G+T+LVV+HVTPIK LL+LALDAG +LYRLHLDLASLSIAEFY DG SSVRLVN Sbjct 305 ASYAGSTILVVTHVTPIKTLLQLALDAGPSLLYRLHLDLASLSIAEFYPDGGSSVRLVND 364 Query 361 TGYL 364 T +L Sbjct 365 TSHL 368 >gi|333918915|ref|YP_004492496.1| phosphoglycerate mutase [Amycolicicoccus subflavus DQS3-9A1] gi|333481136|gb|AEF39696.1| Phosphoglycerate mutase [Amycolicicoccus subflavus DQS3-9A1] Length=360 Score = 454 bits (1167), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 236/362 (66%), Positives = 274/362 (76%), Gaps = 7/362 (1%) Query 3 VVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVK 62 ++IEADGGSRGNPGPAGYGAVV D TVLAE KQAIG ATNNVAEY GLIAGL+ A + Sbjct 1 MIIEADGGSRGNPGPAGYGAVVLDPDDRTVLAERKQAIGIATNNVAEYSGLIAGLEAATE 60 Query 63 LGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYA 122 +GA EA V MDSKLVVEQMSGRWKVKHPD++ L +A LA F + Y WVPRA N +A Sbjct 61 VGAHEAEVRMDSKLVVEQMSGRWKVKHPDMIPLARRAAELAQAFSHVEYRWVPRADNAHA 120 Query 123 DRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQRR 182 DRLAN+AMDAA ++ + P K TE +PGWTGA G PTRLLLLRHGQT+LS +RR Sbjct 121 DRLANEAMDAANENG--EQPPPK---TEE-MAPGWTGAVGKPTRLLLLRHGQTQLSIERR 174 Query 183 YSGRGNPGLNEVGWRQVGAAAGYLAR-RGGIAAVVSSPLQRAYDTAVTAARALALDVVVD 241 YSGRG+ L G RQ AA LAR RG IAAVVSSPL RA TA A L +DV V Sbjct 175 YSGRGDHALTPEGHRQARFAAERLARQRGRIAAVVSSPLTRAQQTAHAVAEGLGVDVHVQ 234 Query 242 DDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRIIV 301 D +ETDFG WEGLTFAEAAERDPEL +RWL DTS+ PPGGE FD+V RR+++ +D ++ Sbjct 235 DGFIETDFGEWEGLTFAEAAERDPELFQRWLTDTSVAPPGGEPFDEVHRRIQKAKDELVA 294 Query 302 GYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQT 361 Y GA V+VV+HVTPIK LLR+ALD G +L+RLHLDLASLSIAEFY DG ++VRL+N T Sbjct 295 EYSGANVIVVTHVTPIKTLLRIALDVGPALLFRLHLDLASLSIAEFYPDGGAAVRLINDT 354 Query 362 GY 363 + Sbjct 355 SH 356 >gi|226360320|ref|YP_002778098.1| bifunctional RNase H/acid phosphatase [Rhodococcus opacus B4] gi|226238805|dbj|BAH49153.1| ribonuclease H/acid phosphatase [Rhodococcus opacus B4] Length=368 Score = 452 bits (1164), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 233/364 (65%), Positives = 275/364 (76%), Gaps = 1/364 (0%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 +VV+EADGGSRGNPGPAGYG VV+ A VLAE K+++G TNNVAEYRGLIAGL+ A Sbjct 5 RVVVEADGGSRGNPGPAGYGTVVFAAADGAVLAERKESLGTVTNNVAEYRGLIAGLEAAA 64 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 ++GA+ V MDSKLVVEQMSGRWKVKHPD++ L +A LA QF + Y W+PRA N + Sbjct 65 EVGASGVDVRMDSKLVVEQMSGRWKVKHPDMIPLQRRASELARQFNSVTYTWIPRAENAH 124 Query 122 ADRLANDAMDAAAQSAAADADPAKIVATES-PTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 ADRLAN+AMD AA + A+ +PA + + +S P +PGW G PTR+LLLRHGQT LS Sbjct 125 ADRLANEAMDGAAGLSGAEPEPAAVQSDKSTPAAPGWMDTTGAPTRMLLLRHGQTVLSVD 184 Query 181 RRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVV 240 RRYSGRGNP L E+G Q AA A GIAAVVSSPL+RA TA AA+AL L V V Sbjct 185 RRYSGRGNPALTEIGLAQANGAASRFAGNDGIAAVVSSPLRRAQQTAAAAAKALGLPVTV 244 Query 241 DDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRII 300 + L ETDFG WEGLTF EAA+RDPELHR+WL DTS+ PP GESFD+V R+ + RD + Sbjct 245 HEGLTETDFGEWEGLTFREAADRDPELHRKWLSDTSVRPPAGESFDEVRERIVKVRDDLT 304 Query 301 VGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQ 360 Y G+T+LVV+HVTPIK LL+LALDAG +LYRLHLDLASLSIAEFY DG SSVRLVN Sbjct 305 ASYAGSTILVVTHVTPIKTLLQLALDAGPSLLYRLHLDLASLSIAEFYPDGGSSVRLVND 364 Query 361 TGYL 364 T +L Sbjct 365 TSHL 368 >gi|325677016|ref|ZP_08156687.1| phosphoglycerate mutase [Rhodococcus equi ATCC 33707] gi|325552178|gb|EGD21869.1| phosphoglycerate mutase [Rhodococcus equi ATCC 33707] Length=377 Score = 446 bits (1146), Expect = 4e-123, Method: Compositional matrix adjust. Identities = 242/373 (65%), Positives = 278/373 (75%), Gaps = 10/373 (2%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 +VV+EADGGSRGNPGPAGYGAVV+ AD VLAE ++ +G ATNNVAEYRGLIAGL A Sbjct 5 RVVVEADGGSRGNPGPAGYGAVVFDADRGRVLAERREFLGVATNNVAEYRGLIAGLAAAR 64 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 LGA E V MDSKLVVEQMSGRWKVKHPD++ L +A+ LA F R+++ W+PRA N++ Sbjct 65 DLGAHEVDVRMDSKLVVEQMSGRWKVKHPDMIPLAQRARELADGFARVDFTWIPRAENSH 124 Query 122 ADRLANDAMDA--AAQSAAADADPAK------IVATESP--TSPGWTGARGTPTRLLLLR 171 ADRLAN+AMD A S AD DPA TES TSPGWTGA G PTR+LLLR Sbjct 125 ADRLANEAMDGEDAITSGFADTDPATGSETSPATDTESAAATSPGWTGAVGAPTRMLLLR 184 Query 172 HGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAA 231 HGQTELS +RRYSGRGNP L G Q +AA +A +G IAAVVSSPL RA +TA AA Sbjct 185 HGQTELSVERRYSGRGNPPLTAFGRTQARSAAQRIADKGAIAAVVSSPLGRARETAAAAA 244 Query 232 RALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRR 291 AL L V V D L+ETDFG WEGLTFAEA +RDP++H RWL DTS+ PP GESFD+V R Sbjct 245 EALGLPVTVHDGLIETDFGKWEGLTFAEAQQRDPDVHTRWLSDTSVRPPEGESFDEVRAR 304 Query 292 VRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADG 351 + RD + Y GA +LVV+HVTPIK LL+LALD G +LYRLHLDLASLSIAEFY DG Sbjct 305 IETVRDDLTASYPGANILVVTHVTPIKTLLQLALDVGPSLLYRLHLDLASLSIAEFYPDG 364 Query 352 ASSVRLVNQTGYL 364 SSVRLVN T +L Sbjct 365 GSSVRLVNDTSHL 377 >gi|312140237|ref|YP_004007573.1| rnase h domain phosphoglycerate/bisphosphoglycerate mutase [Rhodococcus equi 103S] gi|311889576|emb|CBH48893.1| RNase H domain phosphoglycerate/bisphosphoglycerate mutase [Rhodococcus equi 103S] Length=377 Score = 441 bits (1135), Expect = 8e-122, Method: Compositional matrix adjust. Identities = 240/373 (65%), Positives = 276/373 (74%), Gaps = 10/373 (2%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 +VV+EADGGSRGNPGPAGYGAVV+ AD VLAE ++ +G ATNNVAEYRGLIAGL A Sbjct 5 RVVVEADGGSRGNPGPAGYGAVVFDADRGRVLAERREFLGVATNNVAEYRGLIAGLAAAR 64 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 LGA E V MDSKLVVEQMSGRWKVKHPD++ L +A+ LA F R+++ W+PRA N++ Sbjct 65 DLGAHEVDVRMDSKLVVEQMSGRWKVKHPDMIPLAQRARELADGFARVDFTWIPRAENSH 124 Query 122 ADRLANDAMDA--AAQSAAADADPAK------IVATESP--TSPGWTGARGTPTRLLLLR 171 ADRLAN+AMD A S AD DPA TES TSPGWTGA G PTR+LLLR Sbjct 125 ADRLANEAMDGEDAITSGFADTDPATGSETSPATDTESAAATSPGWTGAVGAPTRMLLLR 184 Query 172 HGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAA 231 HGQT LS +RRYSG GNP L G Q +AA +A +G IAAVVSSPL RA +TA AA Sbjct 185 HGQTALSVERRYSGHGNPPLTAFGRTQARSAAQRIADKGAIAAVVSSPLGRARETAAAAA 244 Query 232 RALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRR 291 AL L V V D L+ETDFG WEGLTFAEA +RDP++H RWL DTS+ PP GESFD+V R Sbjct 245 EALGLPVTVHDGLIETDFGKWEGLTFAEAQQRDPDVHTRWLSDTSVRPPEGESFDEVRSR 304 Query 292 VRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADG 351 + RD + Y GA +LVV+HVTPIK LL+LALD G +LYRLHLDLASLSIAEFY DG Sbjct 305 IETVRDDLTASYPGANILVVTHVTPIKTLLQLALDVGPSLLYRLHLDLASLSIAEFYPDG 364 Query 352 ASSVRLVNQTGYL 364 SSVRLVN T +L Sbjct 365 GSSVRLVNDTSHL 377 >gi|226307145|ref|YP_002767105.1| ribonuclease H/acid phosphatase [Rhodococcus erythropolis PR4] gi|226186262|dbj|BAH34366.1| ribonuclease H/acid phosphatase [Rhodococcus erythropolis PR4] Length=374 Score = 433 bits (1114), Expect = 2e-119, Method: Compositional matrix adjust. Identities = 234/371 (64%), Positives = 270/371 (73%), Gaps = 8/371 (2%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +V++EADGGSRGNPGPAGYGAVV+ + S VLAE K++IG ATNNVAEYRGLIAGL A Sbjct 4 TQVIVEADGGSRGNPGPAGYGAVVFDSTRS-VLAERKESIGIATNNVAEYRGLIAGLAAA 62 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGA+ V MDSKLVVEQMSGRWKVKHPD++ L +A LA+QF R+ Y W+PR N+ Sbjct 63 GELGASTVDVRMDSKLVVEQMSGRWKVKHPDMIPLQRRAAELATQFSRVTYTWIPRGENS 122 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTS-------PGWTGARGTPTRLLLLRHG 173 +ADRLAN+AMDAAA A PA A TS PGW G PTR+LLLRHG Sbjct 123 HADRLANEAMDAAAGIETATPAPAAPAAPSEETSEPQIAGSPGWIATTGKPTRMLLLRHG 182 Query 174 QTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARA 233 QT +S RRYSGRGNP L E+G Q AA RGGI A+V SPL R +TA +AR Sbjct 183 QTAMSVDRRYSGRGNPELTELGRAQAAGAAARFGNRGGIDAIVCSPLGRTRETAEASARV 242 Query 234 LALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVR 293 L L VV L+ETDFG W+GLTF EAAERDP+LHR WL DTS+ PPGGESFD+V RV Sbjct 243 LGLPVVEHKGLIETDFGDWDGLTFREAAERDPDLHREWLSDTSVRPPGGESFDEVRERVV 302 Query 294 RGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGAS 353 RD +I Y GAT+LVVSHVTPIK L++LALDAG +LYRLHLDLASLSI EFY DG + Sbjct 303 AARDDLISTYGGATLLVVSHVTPIKTLVQLALDAGPSLLYRLHLDLASLSITEFYPDGGA 362 Query 354 SVRLVNQTGYL 364 SVRLVN T +L Sbjct 363 SVRLVNDTSHL 373 >gi|229490280|ref|ZP_04384122.1| phosphoglycerate mutase [Rhodococcus erythropolis SK121] gi|229322812|gb|EEN88591.1| phosphoglycerate mutase [Rhodococcus erythropolis SK121] Length=376 Score = 432 bits (1112), Expect = 3e-119, Method: Compositional matrix adjust. Identities = 236/372 (64%), Positives = 273/372 (74%), Gaps = 10/372 (2%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 +V++EADGGSRGNPGPAGYGAVV+ A S VLAE K++IG ATNNVAEYRGLIAGL A Sbjct 5 QVIVEADGGSRGNPGPAGYGAVVFDASRS-VLAERKESIGIATNNVAEYRGLIAGLIAAG 63 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 +LGA+ V MDSKLVVEQMSGRWKVKHPD++ L +A LA+QF R+ Y W+PR N++ Sbjct 64 ELGASTVDVRMDSKLVVEQMSGRWKVKHPDMIPLQRRAAELATQFSRVTYTWIPRGENSH 123 Query 122 ADRLANDAMDAAA------QSAAADADPAKIVATESPT---SPGWTGARGTPTRLLLLRH 172 ADRLAN+AMDAAA + +A A A T P SPGW G PTR+LLLRH Sbjct 124 ADRLANEAMDAAAGIETGPVAPSAPAPAAPSEETSEPQIAGSPGWIATTGKPTRMLLLRH 183 Query 173 GQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAAR 232 GQT +S RRYSGRGNP L E+G Q AAG RGGI A+V SPL R +TA +AR Sbjct 184 GQTAMSVDRRYSGRGNPELTELGRAQAAGAAGRFGNRGGIDAIVCSPLGRTRETAEASAR 243 Query 233 ALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRV 292 L L VV L+ETDFG W+GLTF EAAERDP+LHR WL DTS+ PPGGESFD+V RV Sbjct 244 VLGLPVVEHKGLIETDFGDWDGLTFREAAERDPDLHREWLSDTSVRPPGGESFDEVRERV 303 Query 293 RRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGA 352 RD +I Y GAT+LVVSHVTPIK L++LALDAG +LYRLHLDLASLSI EFY DG Sbjct 304 VAARDDLISTYGGATLLVVSHVTPIKTLVQLALDAGPSLLYRLHLDLASLSITEFYPDGG 363 Query 353 SSVRLVNQTGYL 364 +SVRLVN T +L Sbjct 364 ASVRLVNDTSHL 375 >gi|54023608|ref|YP_117850.1| bifunctional RNase H/acid phosphatase [Nocardia farcinica IFM 10152] gi|54015116|dbj|BAD56486.1| putative phosphoglycerate mutase [Nocardia farcinica IFM 10152] Length=406 Score = 421 bits (1082), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 238/401 (60%), Positives = 275/401 (69%), Gaps = 38/401 (9%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 KV++EADGGSRGNPGPAGYGAVV+ ADH VLAE ++++G ATNNVAEYRGLIAGL+ A Sbjct 5 KVIVEADGGSRGNPGPAGYGAVVFDADHVAVLAERRESVGIATNNVAEYRGLIAGLEAAA 64 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 +LGA V MDSKLVVEQMSGRWKVKH ++ L +A+ L + F + + W+PRA+N + Sbjct 65 ELGARTVDVRMDSKLVVEQMSGRWKVKHAAMIPLADRARRLVAGFDAVTFTWIPRAQNAH 124 Query 122 ADRLANDAMDAAA---------------------------------QSAAADAD---PAK 145 ADRLAN+AMD AA + AAA D P Sbjct 125 ADRLANEAMDDAAVVEEVRTARDAGHAPTDLGAHRGAARPGPAATGEGAAALPDSGTPDT 184 Query 146 IVATESPT--SPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAA 203 V ++P +PGWTGA G PTRLLLLRHGQTELS QRRYSGRGNP L E+G Q AA Sbjct 185 RVLPDTPADPAPGWTGATGRPTRLLLLRHGQTELSVQRRYSGRGNPPLTELGREQAARAA 244 Query 204 GYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAER 263 LA +GGIAAV++SPL RA TA AA AL +DV DD L+ETDFG WEGLTF EAAER Sbjct 245 KMLAAKGGIAAVITSPLGRARQTAEAAAAALGVDVQTDDGLIETDFGEWEGLTFREAAER 304 Query 264 DPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRL 323 DPELH WL D S+ PGGESFD V RV R ++ Y G ++VVSHVTPIK LL+L Sbjct 305 DPELHAAWLGDPSVPAPGGESFDQVRARVEAARRDLVALYPGRNLVVVSHVTPIKTLLQL 364 Query 324 ALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL 364 AL G +LYRLHLDLASLSIAEFY DG SSVRLVN T YL Sbjct 365 ALGVGPSLLYRLHLDLASLSIAEFYPDGGSSVRLVNDTSYL 405 >gi|257054785|ref|YP_003132617.1| fructose-2,6-bisphosphatase [Saccharomonospora viridis DSM 43017] gi|256584657|gb|ACU95790.1| fructose-2,6-bisphosphatase [Saccharomonospora viridis DSM 43017] Length=383 Score = 409 bits (1050), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 228/380 (60%), Positives = 266/380 (70%), Gaps = 20/380 (5%) Query 3 VVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVK 62 V++EADGGSRGNPGPAGYGAVV D VLAE ++ +G TNNVAEYRGLIAGL+ A + Sbjct 5 VIVEADGGSRGNPGPAGYGAVVRDPDSGDVLAERQEGLGVTTNNVAEYRGLIAGLEAAAE 64 Query 63 LGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYA 122 LGA+ +DSKLVVEQMSGRWK+K+ L L ++ + LASQF R+ Y WVPRA N +A Sbjct 65 LGASAVEARLDSKLVVEQMSGRWKIKNAMLQPLALRVRELASQFDRVTYTWVPRAHNAHA 124 Query 123 DRLANDAMD----------AAAQSAAADADPAKIVATES-----PTSPGWTGARGTPTRL 167 DRLAN+AMD AAA+S A AD + A E PT WTGA+GTPTR+ Sbjct 125 DRLANEAMDTQADGGGQTSAAARSTEARADQPREEAREPVQQRLPTR--WTGAQGTPTRM 182 Query 168 LLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGY---LARRGGIAAVVSSPLQRAY 224 LLLRHGQT LS RRYSG G+ L E+G RQ AAA L G VVSSPL RA Sbjct 183 LLLRHGQTPLSVDRRYSGLGDVTLTELGVRQAEAAAKRIAALEDLGESVHVVSSPLMRAT 242 Query 225 DTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGES 284 TA A AL + V +L E DFG WEGLTFAEAA+RDPELHRRWL++ S+ PPGGES Sbjct 243 QTAQRVADALGVRVETHRELREADFGEWEGLTFAEAAQRDPELHRRWLRNASVRPPGGES 302 Query 285 FDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSI 344 FD+V RRVRR +I Y G TV++VSHVTPIK LLR ALD G +LYRLHLDLASLSI Sbjct 303 FDEVYRRVRRACSDVIARYGGETVVIVSHVTPIKSLLRYALDVGPSLLYRLHLDLASLSI 362 Query 345 AEFYADGASSVRLVNQTGYL 364 A+FY DG +SVRL+N T +L Sbjct 363 ADFYPDGNASVRLINDTSHL 382 >gi|25028689|ref|NP_738743.1| bifunctional RNase H/acid phosphatase [Corynebacterium efficiens YS-314] gi|23493975|dbj|BAC18943.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=435 Score = 400 bits (1029), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 213/389 (55%), Positives = 255/389 (66%), Gaps = 25/389 (6%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIG-RATNNVAEYRGLIAGLDD 59 +K++IEADGGSRGNPG AG G VV++ + +L E +G R+TNNVAEYRGLI GL Sbjct 45 MKLIIEADGGSRGNPGVAGSGTVVYSENRERILREIAYVVGTRSTNNVAEYRGLIEGLRV 104 Query 60 AVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARN 119 A +LGATE V MDSKLVVEQMSGRWK+KHPD+ L ++A+ LA R+ Y W+PR +N Sbjct 105 ARELGATEVEVFMDSKLVVEQMSGRWKIKHPDMKTLAMEARNLAGDIGRVTYTWIPREKN 164 Query 120 TYADRLANDAMDAAAQ--------------SAAADADPAKIVATESPTSPG--------- 156 AD L+N AMDAAA S D A + + PT Sbjct 165 KAADHLSNVAMDAAAAGKPEGPIDDGTPVVSDMTDPTDATVTGVDKPTGEDLNCPTTKPA 224 Query 157 -WTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAV 215 W GA PTRLLLLRHGQT +S R+YSGR NP L+E+G RQV AAA LA RGGI + Sbjct 225 TWNGATTDPTRLLLLRHGQTAMSAARQYSGRSNPELSELGQRQVQAAARKLAERGGIDVI 284 Query 216 VSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDT 275 VSSPL+R TA AA + L+V + DDL+E DFG W+G TF+EA E DPELH RWL DT Sbjct 285 VSSPLRRCVQTAGAAADQMGLEVRIIDDLIEADFGLWDGKTFSEAHESDPELHSRWLTDT 344 Query 276 SITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRL 335 S+ PPGGES V RRV++ R+ I Y A VLVVSHVTPIK +LR ALDA + Sbjct 345 SVAPPGGESLQQVHRRVKKARELIEKDYGAANVLVVSHVTPIKSILRQALDASPSFFKKT 404 Query 336 HLDLASLSIAEFYADGASSVRLVNQTGYL 364 HLDLASLSIAEFY+DG + VRL N T +L Sbjct 405 HLDLASLSIAEFYSDGPTCVRLFNDTSHL 433 >gi|259507750|ref|ZP_05750650.1| phosphoglycerate mutase family protein [Corynebacterium efficiens YS-314] gi|259164543|gb|EEW49097.1| phosphoglycerate mutase family protein [Corynebacterium efficiens YS-314] Length=391 Score = 400 bits (1029), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 214/389 (56%), Positives = 256/389 (66%), Gaps = 25/389 (6%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIG-RATNNVAEYRGLIAGLDD 59 +K++IEADGGSRGNPG AG G VV++ + +L E +G R+TNNVAEYRGLI GL Sbjct 1 MKLIIEADGGSRGNPGVAGSGTVVYSENRERILREIAYVVGTRSTNNVAEYRGLIEGLRV 60 Query 60 AVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARN 119 A +LGATE V MDSKLVVEQMSGRWK+KHPD+ L ++A+ LA R+ Y W+PR +N Sbjct 61 ARELGATEVEVFMDSKLVVEQMSGRWKIKHPDMKTLAMEARNLAGDIGRVTYTWIPREKN 120 Query 120 TYADRLANDAMDAAAQ--------------SAAADADPAKIVATESPT---------SPG 156 AD L+N AMDAAA S D A + + PT P Sbjct 121 KAADHLSNVAMDAAAAGKPEGPIDDGTPVVSDMTDPTDATVTGVDKPTGEDLNCPTTKPA 180 Query 157 -WTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAV 215 W GA PTRLLLLRHGQT +S R+YSGR NP L+E+G RQV AAA LA RGGI + Sbjct 181 TWNGATTDPTRLLLLRHGQTAMSAARQYSGRSNPELSELGQRQVQAAARKLAERGGIDVI 240 Query 216 VSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDT 275 VSSPL+R TA AA + L+V + DDL+E DFG W+G TF+EA E DPELH RWL DT Sbjct 241 VSSPLRRCVQTAGAAADQMGLEVRIIDDLIEADFGLWDGKTFSEAHESDPELHSRWLTDT 300 Query 276 SITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRL 335 S+ PPGGES V RRV++ R+ I Y A VLVVSHVTPIK +LR ALDA + Sbjct 301 SVAPPGGESLQQVHRRVKKARELIEKDYGAANVLVVSHVTPIKSILRQALDASPSFFKKT 360 Query 336 HLDLASLSIAEFYADGASSVRLVNQTGYL 364 HLDLASLSIAEFY+DG + VRL N T +L Sbjct 361 HLDLASLSIAEFYSDGPTCVRLFNDTSHL 389 >gi|38234249|ref|NP_940016.1| bifunctional RNase H/acid phosphatase [Corynebacterium diphtheriae NCTC 13129] gi|38200511|emb|CAE50207.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length=377 Score = 397 bits (1021), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 202/376 (54%), Positives = 258/376 (69%), Gaps = 13/376 (3%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPG AG G +++ AD S VL E +G+ATNNVAEY GL+ GL A Sbjct 1 MKVIIEADGGSRGNPGIAGSGTLIYNADRSQVLKEYSYVVGKATNNVAEYHGLLNGLRGA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE +V MDSKLVVEQMSGRWK+KHPD+ +L ++ + +AS ++YEW+PR+ N+ Sbjct 61 AELGATEVSVRMDSKLVVEQMSGRWKIKHPDMKELALECKKVASSIGSVSYEWIPRSENS 120 Query 121 YADRLANDAMDAAAQSA----------AADADPAKIVATESPTSPG-WTGARGTPTRLLL 169 +AD LAN AMDA A+ A AA D + V E+ TSP W GA TR +L Sbjct 121 HADALANKAMDALAEGAAVGFLELEEPAAKTDSEEKV-VETATSPAVWNGATTQATRFVL 179 Query 170 LRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVT 229 LRHGQT +S R+YSGR NP L VG Q AA ++ RRGGI A+V+SPLQR TA Sbjct 180 LRHGQTAMSAARQYSGRSNPELTSVGLEQARRAAAFIGRRGGIDAIVASPLQRCQQTAHE 239 Query 230 AARAL-ALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDV 288 + L + V D L+E DFG W+GL+F++A E DPELH WL D+ PPGGES V Sbjct 240 VSEQLGGMPVRTIDGLIEMDFGQWDGLSFSQAHEADPELHSAWLDDSRTAPPGGESLQQV 299 Query 289 LRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFY 348 RRV++ R+ + Y G T++VVSHVTPIK +LR ALDA + + +R+HLDLAS+S+AEFY Sbjct 300 HRRVKKVREELERKYAGKTIVVVSHVTPIKSILRQALDASASMFHRMHLDLASISVAEFY 359 Query 349 ADGASSVRLVNQTGYL 364 +DG + VR VN T YL Sbjct 360 SDGPTCVRSVNDTHYL 375 >gi|334697308|gb|AEG82105.1| hypothetical protein CULC809_01573 [Corynebacterium ulcerans 809] Length=385 Score = 397 bits (1021), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 210/384 (55%), Positives = 260/384 (68%), Gaps = 20/384 (5%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPG AG G V++ A H+T+L +G ATNNVAEY L+ GL A Sbjct 1 MKVIIEADGGSRGNPGVAGSGTVLFDATHTTILRRLAYIVGTATNNVAEYHALLNGLTAA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE VLMDSKLVVEQMSGRWK+KHPD+ +L + + +AS F I Y W+PR +N Sbjct 61 RELGATEVDVLMDSKLVVEQMSGRWKIKHPDMKELALTCRDIASGFASITYTWIPRKQNA 120 Query 121 YADRLANDAMDAAAQ--------------SAAADADPAK----IVATESPTSPG-WTGAR 161 AD LAN AMDA AQ SAA+ +PA + T+P W GA Sbjct 121 RADELANKAMDALAQGAQPGFLDLGGDSLSAASCTEPATKKDDCAGDQHATAPKTWNGAT 180 Query 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQ 221 TR LLLRHGQT +S R+YSG +P L+E+G Q AA YLA RGGI +VSSPL+ Sbjct 181 TDATRFLLLRHGQTPMSAARQYSGLSDPSLSELGRYQAERAAQYLASRGGIDVIVSSPLK 240 Query 222 RAYDTAVTAARALAL-DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPP 280 R +TA AA+AL + D+ DDL E DFG W+GLTF++A E DPELH++WL D + PP Sbjct 241 RCQETASAAAQALGMSDIRTLDDLREMDFGQWDGLTFSQAHESDPELHQQWLADPKVAPP 300 Query 281 GGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLA 340 GGES RR++R R+ + Y AT+LVVSHVTPIK +LR ALDA +G+ +R+HLDLA Sbjct 301 GGESLVQAHRRIKRVREELQREYGEATILVVSHVTPIKSILRQALDASAGMFHRMHLDLA 360 Query 341 SLSIAEFYADGASSVRLVNQTGYL 364 SLSIAEFY+DG + VRLVN T YL Sbjct 361 SLSIAEFYSDGPTCVRLVNDTSYL 384 >gi|256375028|ref|YP_003098688.1| phosphoglycerate mutase [Actinosynnema mirum DSM 43827] gi|255919331|gb|ACU34842.1| Phosphoglycerate mutase [Actinosynnema mirum DSM 43827] Length=391 Score = 397 bits (1021), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 234/390 (60%), Positives = 267/390 (69%), Gaps = 26/390 (6%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 ++V++EADGGSRGNPGPAGYGAVV TVLAE +AIG ATNNVAEYRGLIAGL A Sbjct 1 MRVLVEADGGSRGNPGPAGYGAVVLDEGGDTVLAERFEAIGVATNNVAEYRGLIAGLRAA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE V MDSKLVVEQMSGRW++KHP + L +A+ LA F + Y W+PR RN Sbjct 61 AELGATEVDVRMDSKLVVEQMSGRWQIKHPAMKPLAAEAKELAGDFESVTYGWIPRERNK 120 Query 121 YADRLANDAMDAAAQ-----------------SAAADADPAKIVATESP-------TSP- 155 AD+LANDAMD A AA AK V TE P T+P Sbjct 121 RADKLANDAMDGKAMPDPVIGEVPAGEGAAGGGAAGKPAAAKAVVTERPAESAAHVTAPP 180 Query 156 -GWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAA 214 W+GA G PTRL L+RHGQTELS RRYSGRGNP L EVG Q AAA L+ G+AA Sbjct 181 ASWSGAEGRPTRLHLVRHGQTELSVARRYSGRGNPPLTEVGLGQARAAAARLSTLDGVAA 240 Query 215 VVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQD 274 VV+SPLQR TA A AL L+V V +DL+E DFG WE LTF EAAERDPE H RWL D Sbjct 241 VVASPLQRTRQTAGEIAAALGLEVDVREDLIEVDFGEWEALTFTEAAERDPEAHARWLGD 300 Query 275 TSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYR 334 TS PPGGESFD V RRV R + + + G+ V+VVSHVTP+K LLRLAL +G +LYR Sbjct 301 TSAAPPGGESFDAVHRRVSRFLEELAAEHAGSDVVVVSHVTPVKTLLRLALGSGPEILYR 360 Query 335 LHLDLASLSIAEFYADGASSVRLVNQTGYL 364 LHLDLASLSIAEFY DG +SVRLVN T +L Sbjct 361 LHLDLASLSIAEFYPDGHASVRLVNDTSHL 390 >gi|300858913|ref|YP_003783896.1| hypothetical protein cpfrc_01496 [Corynebacterium pseudotuberculosis FRC41] gi|300686367|gb|ADK29289.1| hypothetical protein cpfrc_01496 [Corynebacterium pseudotuberculosis FRC41] gi|302206612|gb|ADL10954.1| Bifunctional RNase H/acid phosphatase [Corynebacterium pseudotuberculosis C231] gi|302331163|gb|ADL21357.1| Bifunctional RNase H/acid phosphatase [Corynebacterium pseudotuberculosis 1002] gi|308276856|gb|ADO26755.1| Bifunctional RNase H/acid phosphatase [Corynebacterium pseudotuberculosis I19] gi|341825299|gb|AEK92820.1| Bifunctional RNase H/acid phosphatase [Corynebacterium pseudotuberculosis PAT10] Length=385 Score = 397 bits (1019), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 207/384 (54%), Positives = 256/384 (67%), Gaps = 20/384 (5%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPG AG G V++ A H+ +L +G ATNNVAEY L+ GL A Sbjct 1 MKVIIEADGGSRGNPGVAGSGTVLFDATHTEILRRLAYVVGTATNNVAEYHALLNGLTAA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE VLMDSKLVVEQMSGRWK+KHPD+ +L + Q +AS F I Y W+PR +N Sbjct 61 RELGATEVDVLMDSKLVVEQMSGRWKIKHPDMKQLALSCQHIASGFASITYTWIPRNQNA 120 Query 121 YADRLANDAMDAAA--------------QSAAADADPA----KIVATESPTSPG-WTGAR 161 AD LAN AMDA A QSAA DPA K T+P W GA Sbjct 121 RADELANKAMDALAKGAQPGFLELGDQPQSAATSTDPAEEKDKCAGDRHATAPKTWNGAT 180 Query 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQ 221 TR LLLRHGQT +S R+YSG NP L+++G Q AA Y A RGGI +V+SPL+ Sbjct 181 TEATRFLLLRHGQTPMSAARQYSGLSNPSLSDLGRYQAECAAQYFASRGGIDVIVASPLK 240 Query 222 RAYDTAVTAARALAL-DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPP 280 R +TA AR+L + D+ D+L E DFG W+GLTF++A E DPELH++WL D I PP Sbjct 241 RCQETAAAVARSLRMSDIRTVDELREMDFGQWDGLTFSQAHESDPELHQQWLADPKIAPP 300 Query 281 GGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLA 340 GGES RR+++ R+ + Y +TVLVVSHVTPIK ++R ALDA +G+ +R+HLDLA Sbjct 301 GGESLVQAHRRIKKAREELQREYGESTVLVVSHVTPIKSIVRQALDAPAGMFHRMHLDLA 360 Query 341 SLSIAEFYADGASSVRLVNQTGYL 364 SLSIAEFY+DG + VRLVN T YL Sbjct 361 SLSIAEFYSDGPTCVRLVNDTSYL 384 >gi|337291198|ref|YP_004630219.1| hypothetical protein CULC22_01590 [Corynebacterium ulcerans BR-AD22] gi|334699504|gb|AEG84300.1| hypothetical protein CULC22_01590 [Corynebacterium ulcerans BR-AD22] Length=380 Score = 396 bits (1018), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 208/379 (55%), Positives = 258/379 (69%), Gaps = 15/379 (3%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KV+IEADGGSRGNPG AG G V++ A H+T+L +G ATNNVAEY L+ GL A Sbjct 1 MKVIIEADGGSRGNPGVAGSGTVLFDATHTTILRRLAYIVGTATNNVAEYHALLNGLTAA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE VLMDSKLVVEQMSGRWK+KHPD+ +L + + +AS F I Y W+PR +N Sbjct 61 RELGATEVDVLMDSKLVVEQMSGRWKIKHPDMKELALTCRDIASGFASITYTWIPRKQNA 120 Query 121 YADRLANDAMDAAAQSA-------AADADPA------KIVATESPTSPG-WTGARGTPTR 166 AD LAN AMDA AQ A D+ P + T+P W GA TR Sbjct 121 RADELANKAMDALAQGAQPGFLDLGGDSHPEPATKKDDCAGDQHATAPKTWNGATTDATR 180 Query 167 LLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDT 226 LLLRHGQT +S R+YSG +P L+E+G Q AA YLA RGGI +VSSPL+R +T Sbjct 181 FLLLRHGQTPMSAARQYSGLSDPSLSELGRYQAERAAQYLASRGGIDVIVSSPLKRCQET 240 Query 227 AVTAARALAL-DVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESF 285 A+ AA+AL + D+ DDL E DFG W+GLTF++A E DPELH++WL D + PPGGES Sbjct 241 ALAAAQALGMSDIRTLDDLREMDFGQWDGLTFSQAHESDPELHQQWLADPKVAPPGGESL 300 Query 286 DDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIA 345 RR++R R+ + Y AT+LVVSHVTPIK +LR ALDA +G+ +R+HLDLASLSIA Sbjct 301 VQAHRRIKRVREELQREYGEATILVVSHVTPIKSILRQALDASAGMFHRMHLDLASLSIA 360 Query 346 EFYADGASSVRLVNQTGYL 364 EFY+DG + VRLVN T YL Sbjct 361 EFYSDGPTCVRLVNDTSYL 379 >gi|134098170|ref|YP_001103831.1| putative bifunctional protein (ribonuclease H/phosphoglycerate mutase) [Saccharopolyspora erythraea NRRL 2338] gi|291007551|ref|ZP_06565524.1| putative bifunctional protein (ribonuclease H/phosphoglycerate mutase) [Saccharopolyspora erythraea NRRL 2338] gi|133910793|emb|CAM00906.1| putative bifunctional protein (ribonuclease H/phosphoglycerate mutase) [Saccharopolyspora erythraea NRRL 2338] Length=366 Score = 387 bits (994), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 216/373 (58%), Positives = 248/373 (67%), Gaps = 21/373 (5%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 ++VVIEADGGSRGNPGPAG GAVV A VLAE +G ATNN AEYRGLI GL A Sbjct 3 LRVVIEADGGSRGNPGPAGCGAVVRDATSGEVLAERSVGLGTATNNAAEYRGLIEGLSAA 62 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 V+LGA V MDSKLV+EQM+GRWKVKH +L L +A+AL + F ++ EWVPRARN Sbjct 63 VELGAEAIEVRMDSKLVIEQMAGRWKVKHANLQPLAEKARALLAGFGEVDLEWVPRARNA 122 Query 121 YADRLANDAMDAAA----QSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTE 176 +ADRLAN+AMD A + AAA PA GW GA G PTR LLLRHGQT Sbjct 123 HADRLANEAMDEQAGIRREPAAARVRPA-----------GWLGATGAPTRFLLLRHGQTA 171 Query 177 LSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGI------AAVVSSPLQRAYDTAVTA 230 +S RRYSGRG+ L + G RQ AA LA G+ A V++SPL R TA Sbjct 172 MSVDRRYSGRGDVVLTDFGERQARAAGRRLAGMDGVVTDAGAAPVIASPLSRTRQTAQAV 231 Query 231 ARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLR 290 A +++ D L+ETDFG WEGLTFAEAAE+ PELHR WL D S+ PP GES D V R Sbjct 232 VDATGGELLFHDGLLETDFGDWEGLTFAEAAEQYPELHREWLGDPSVRPPNGESLDAVFR 291 Query 291 RVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYAD 350 RV RD +I Y G TV+VVSHVTPIK LLRL LD G + YRLHLDLASLSI EFY D Sbjct 292 RVADTRDELIESYAGQTVVVVSHVTPIKALLRLGLDVGPSMFYRLHLDLASLSIVEFYPD 351 Query 351 GASSVRLVNQTGY 363 G +SVRLVN + Sbjct 352 GLASVRLVNDISH 364 >gi|300783100|ref|YP_003763391.1| bifunctional RNase H/acid phosphatase [Amycolatopsis mediterranei U32] gi|299792614|gb|ADJ42989.1| putative bifunctional RNase H/acid phosphatase [Amycolatopsis mediterranei U32] gi|340524479|gb|AEK39684.1| bifunctional RNase H/acid phosphatase [Amycolatopsis mediterranei S699] Length=402 Score = 385 bits (988), Expect = 8e-105, Method: Compositional matrix adjust. Identities = 228/403 (57%), Positives = 272/403 (68%), Gaps = 43/403 (10%) Query 3 VVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVK 62 +V+EADGGSRGNPGPAGYGAVV +D VLAE K+++G TNNVAEY GLIAGL A + Sbjct 1 MVVEADGGSRGNPGPAGYGAVVKDSD-GQVLAERKESLGVVTNNVAEYNGLIAGLAAAAE 59 Query 63 LGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYA 122 LGA+ V MDSKLVVEQMSGRWK+KHP + L +A+ LA+ F R+ YEW+PRA+N++A Sbjct 60 LGASTVDVRMDSKLVVEQMSGRWKIKHPGMQPLAERAKELAAGFSRVKYEWIPRAQNSHA 119 Query 123 DRLANDAMDAAAQSAAA---------------------------------DADPAKIVAT 149 DRLAN+AMDAA AA ADP K+ T Sbjct 120 DRLANEAMDAATGKPAAGRPGAATAGRARQVARQTAVRGPAAAEREPRAAKADPPKL-PT 178 Query 150 ESP--TSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLA 207 P + GWTGARGTPTRLLLLRHGQTE+S RRYSGRG+ L E+G Q AAA LA Sbjct 179 RKPDRAAVGWTGARGTPTRLLLLRHGQTEMSALRRYSGRGDVPLTELGRSQAAAAAKRLA 238 Query 208 RRGGIAA------VVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAA 261 G+ ++SSPL R TA A AL V L+ETDFG WEGLTFAEAA Sbjct 239 AMEGLVVDGEAVPIISSPLTRTKQTAQAVADALGGRVETHPGLIETDFGDWEGLTFAEAA 298 Query 262 ERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLL 321 +RDPELHR WL D+++ PPGGESF+ V RRVR+ RD +I + G T+++VSHVTPIK LL Sbjct 299 DRDPELHRSWLSDSAVPPPGGESFEVVHRRVRKARDELIAEHGGRTLVLVSHVTPIKTLL 358 Query 322 RLALDAGSGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL 364 R+ LDAG +L+RLHLDLASLSI EFY DG +SVRLVN T +L Sbjct 359 RMGLDAGPQLLFRLHLDLASLSIVEFYPDGNASVRLVNDTSHL 401 >gi|344044315|gb|EGV39993.1| bifunctional RNase H/acid phosphatase [Corynebacterium glutamicum S9114] Length=382 Score = 378 bits (970), Expect = 9e-103, Method: Compositional matrix adjust. Identities = 209/382 (55%), Positives = 261/382 (69%), Gaps = 20/382 (5%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIG-RATNNVAEYRGLIAGLDD 59 +K+VIEADGGSRGNPG AG G VV++ + + VL E +G +ATNNVAEYRGL+ GL Sbjct 1 MKLVIEADGGSRGNPGVAGSGTVVYSDNKAEVLKEIAYVVGTKATNNVAEYRGLLEGLKA 60 Query 60 AVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARN 119 A +LGAT V MDSKLVVEQMSGRWK+KHPD+ L ++A+ +AS+ ++Y W+PR +N Sbjct 61 ARELGATSVDVYMDSKLVVEQMSGRWKIKHPDMKVLAIEAKEIASEIGSVSYTWIPREKN 120 Query 120 TYADRLANDAMDAAA----------------QSAAADADPAKIVATES-PTSPGWTGARG 162 AD L+N AMDAAA S+ A ++ + TE+ PT+ W GA Sbjct 121 KRADALSNVAMDAAAAGKPVGVVGDSASVSSASSVAGSEKEDLNCTETKPTN--WNGATT 178 Query 163 TPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQR 222 PTR LLLRHGQT +S R YSGR NP L+E+G +Q AAA LA+ GGI A+VSSPL R Sbjct 179 DPTRFLLLRHGQTAMSAARLYSGRSNPELSELGEKQAAAAARRLAQTGGIDAIVSSPLTR 238 Query 223 AYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGG 282 TA AA AL + V V DDL+ETDFG W+G +F+EA E+DPELH +WL D+S+ PPGG Sbjct 239 TMQTAEAAAAALGMKVRVIDDLIETDFGLWDGKSFSEAHEQDPELHTKWLTDSSVAPPGG 298 Query 283 ESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASL 342 ES V RRV++ R+ + Y A VLVVSHVTPIK ++R ALDAG + HLDLASL Sbjct 299 ESLQTVNRRVKKARESLQREYGAANVLVVSHVTPIKAIMRQALDAGPSFFQKAHLDLASL 358 Query 343 SIAEFYADGASSVRLVNQTGYL 364 SIAEFY DG + VRL N T +L Sbjct 359 SIAEFYEDGPTCVRLFNDTSHL 380 >gi|19553436|ref|NP_601438.1| bifunctional RNase H/acid phosphatase [Corynebacterium glutamicum ATCC 13032] gi|62391077|ref|YP_226479.1| bifunctional RNase H/acid phosphatase [Corynebacterium glutamicum ATCC 13032] gi|19110481|dbj|BAB85788.1| RNase HI [Corynebacterium glutamicum] gi|21325007|dbj|BAB99629.1| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Corynebacterium glutamicum ATCC 13032] gi|41326416|emb|CAF20578.1| Ribonuclease HI [Corynebacterium glutamicum ATCC 13032] Length=382 Score = 377 bits (969), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 209/382 (55%), Positives = 261/382 (69%), Gaps = 20/382 (5%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIG-RATNNVAEYRGLIAGLDD 59 +K+VIEADGGSRGNPG AG G VV++ + + VL E +G +ATNNVAEYRGL+ GL Sbjct 1 MKLVIEADGGSRGNPGVAGSGTVVYSDNKAEVLKEIAYVVGTKATNNVAEYRGLLEGLKA 60 Query 60 AVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARN 119 A +LGAT V MDSKLVVEQMSGRWK+KHPD+ L ++A+ +AS+ ++Y W+PR +N Sbjct 61 ARELGATSVDVYMDSKLVVEQMSGRWKIKHPDMKVLAIEAKEIASEIGSVSYTWIPREKN 120 Query 120 TYADRLANDAMDAAA----------------QSAAADADPAKIVATES-PTSPGWTGARG 162 AD L+N AMDAAA S+ A ++ + TE+ PT+ W GA Sbjct 121 KRADALSNVAMDAAAAGKPVGVVGDSASVSSASSVAGSEKEDLNCTETKPTN--WNGATT 178 Query 163 TPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQR 222 PTR LLLRHGQT +S R YSGR NP L+E+G +Q AAA LA+ GGI A+VSSPL R Sbjct 179 DPTRFLLLRHGQTAMSVARLYSGRSNPELSELGEKQAAAAARRLAQTGGIDAIVSSPLTR 238 Query 223 AYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGG 282 TA AA AL + V V DDL+ETDFG W+G +F+EA E+DPELH +WL D+S+ PPGG Sbjct 239 TMQTAEAAAAALGMKVRVIDDLIETDFGLWDGKSFSEAHEQDPELHTKWLTDSSVAPPGG 298 Query 283 ESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASL 342 ES V RRV++ R+ + Y A VLVVSHVTPIK ++R ALDAG + HLDLASL Sbjct 299 ESLQTVNRRVKKARESLQREYGAANVLVVSHVTPIKAIMRQALDAGPSFFQKAHLDLASL 358 Query 343 SIAEFYADGASSVRLVNQTGYL 364 SIAEFY DG + VRL N T +L Sbjct 359 SIAEFYEDGPTCVRLFNDTSHL 380 >gi|145296194|ref|YP_001139015.1| bifunctional RNase H/acid phosphatase [Corynebacterium glutamicum R] gi|140846114|dbj|BAF55113.1| hypothetical protein [Corynebacterium glutamicum R] Length=380 Score = 374 bits (961), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 209/380 (55%), Positives = 262/380 (69%), Gaps = 18/380 (4%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIG-RATNNVAEYRGLIAGLDD 59 +K+VIEADGGSRGNPG AG G VV++ + + VL E +G +ATNNVAEYRGL+ GL Sbjct 1 MKLVIEADGGSRGNPGVAGSGTVVYSDNKAEVLKEIAYVVGTKATNNVAEYRGLLEGLKA 60 Query 60 AVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARN 119 A +LGAT V MDSKLVVEQMSGRWK+KHPD+ L ++A+ +AS+ ++Y W+PR +N Sbjct 61 ARELGATSVDVYMDSKLVVEQMSGRWKIKHPDMKVLALEAKEIASEIGSVSYTWIPREKN 120 Query 120 TYADRLANDAMDAAA--------------QSAAADADPAKIVATES-PTSPGWTGARGTP 164 AD L+N AMDAAA ++ AD++ + TE+ PT+ W GA P Sbjct 121 KRADALSNVAMDAAAAGKPVGVVGDSASSAASVADSEKEDLNCTETKPTN--WNGATTDP 178 Query 165 TRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAY 224 TR LLLRHGQT +S R YSGR NP L+E+G +Q AAA LA+ GGI A+VSSPL R Sbjct 179 TRFLLLRHGQTAMSAARLYSGRSNPELSELGEKQAAAAARRLAQAGGIDAIVSSPLTRTM 238 Query 225 DTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGES 284 TA AA AL + V V DDL+ETDFG W+G +F+EA E+DPELH +WL D+S+ PPGGES Sbjct 239 QTAEAAAAALGMKVRVIDDLIETDFGLWDGKSFSEAHEQDPELHTKWLTDSSVAPPGGES 298 Query 285 FDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSI 344 V RRV++ R+ + Y A VLVVSHVTPIK ++R ALDAG + HLDLASLSI Sbjct 299 LQTVNRRVKKARESLQREYGAANVLVVSHVTPIKAIMRQALDAGPSFFQKAHLDLASLSI 358 Query 345 AEFYADGASSVRLVNQTGYL 364 AEFY DG + VRL N T +L Sbjct 359 AEFYEDGPTCVRLFNDTSHL 378 >gi|302524447|ref|ZP_07276789.1| bifunctional RNase H/acid phosphatase [Streptomyces sp. AA4] gi|302433342|gb|EFL05158.1| bifunctional RNase H/acid phosphatase [Streptomyces sp. AA4] Length=380 Score = 374 bits (959), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 220/376 (59%), Positives = 257/376 (69%), Gaps = 13/376 (3%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 + ++EADGGSRGNPGPAGYGAVV A VLAE + +G ATNNVAEY GL+AGL A Sbjct 4 RAIVEADGGSRGNPGPAGYGAVVKDASTGEVLAERHEYLGVATNNVAEYSGLVAGLAAAA 63 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 +LG + V MDSKLVVEQMSGRWK+KH L L QA+ +A+ F R++Y W+PRA N++ Sbjct 64 ELGVSIVDVRMDSKLVVEQMSGRWKIKHAALQPLAAQAREIAAGFERVSYTWIPRAENSH 123 Query 122 ADRLANDAMDAAAQSAAA-----DADPAKIVATESPTSP-GWTGARGTPTRLLLLRHGQT 175 ADRLAN AMD A A + +A P A SP GWTGARGTPT+LLLLRHGQT Sbjct 124 ADRLANVAMDRAGSGATSSAPVSEARPKAKAAEPDRVSPAGWTGARGTPTKLLLLRHGQT 183 Query 176 ELSEQRRYSGRGNPGLNEVGWRQVGAA-------AGYLARRGGIAAVVSSPLQRAYDTAV 228 E+S RRYSGRG+ L E G Q AA +G + G A +VSSPL R TA Sbjct 184 EMSVDRRYSGRGDVPLTEHGRGQAAAAAKRLAAMSGLIGEDGEPAPIVSSPLIRTKQTAQ 243 Query 229 TAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDV 288 A AL V L+ETDFG WEGLTF+EAA+RDPELHR WL D+S PPGGESFD V Sbjct 244 AVADALGGRVETHPGLIETDFGEWEGLTFSEAAQRDPELHRCWLSDSSCPPPGGESFDAV 303 Query 289 LRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFY 348 RV R +I Y+G TV+VVSHVTPIK LLR+ LDAG +L+RLHLDLASLSI EFY Sbjct 304 HERVGTARRDLIERYDGRTVVVVSHVTPIKTLLRMGLDAGPSLLFRLHLDLASLSIVEFY 363 Query 349 ADGASSVRLVNQTGYL 364 DG +SVRLVN +L Sbjct 364 PDGNASVRLVNDISHL 379 >gi|324998690|ref|ZP_08119802.1| bifunctional RNase H/acid phosphatase [Pseudonocardia sp. P1] Length=392 Score = 369 bits (948), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 221/383 (58%), Positives = 260/383 (68%), Gaps = 20/383 (5%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 VK+V+EADGGSRGNPGPAGYGAVV A + VLAE +G ATNNVAEYRGLIAGL A Sbjct 10 VKLVVEADGGSRGNPGPAGYGAVVLDAGGTQVLAEVYDGLGTATNNVAEYRGLIAGLTAA 69 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGATE +DSKLVVEQMSGRWK+K+ L +L A+ A+ F + + W+PRA N Sbjct 70 RELGATEVDARLDSKLVVEQMSGRWKIKNTALQELADTARDQAAGFDAVTFTWIPRADNA 129 Query 121 YADRLANDAMDAAAQSA---AADADPAKIVATESPTSPG-----------WTGARGTPTR 166 AD LAN AMD + A +A A PA+ AT +PT WTG GTP R Sbjct 130 RADALANRAMDGESSPALDPSAAAGPARKPAT-APTETSEVAGPASAAAAWTGQVGTPVR 188 Query 167 LLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLA---RRGGI--AAVVSSPLQ 221 ++LLRHGQT LS +RRYSG G+P L E G Q AAA LA ++ G+ AAV+SSPL+ Sbjct 189 MILLRHGQTALSIERRYSGHGDPELTEAGQVQAAAAARALATRLKKQGVVPAAVLSSPLR 248 Query 222 RAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPG 281 RA TA A A ++ V D L+ETDFG WEGLTF EA ERDP+LH RWL + PPG Sbjct 249 RARQTAAAVAEATGAELEVRDALIETDFGGWEGLTFREARERDPDLHGRWLGSADVEPPG 308 Query 282 GESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLAS 341 GESF V RV R RI+ G+ GATV+VVSHVTPIKMLLR AL AG VLYR+HLDLA Sbjct 309 GESFRAVGERVGAERRRIVDGFPGATVIVVSHVTPIKMLLREALGAGDEVLYRMHLDLAC 368 Query 342 LSIAEFYADGASSVRLVNQTGYL 364 S+A+FY DG +SVRLVN T YL Sbjct 369 TSVADFYPDGGASVRLVNDTSYL 391 >gi|334563303|ref|ZP_08516294.1| bifunctional RNase H/acid phosphatase [Corynebacterium bovis DSM 20582] Length=398 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 201/381 (53%), Positives = 231/381 (61%), Gaps = 18/381 (4%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 +V +E DGGSRGNPG AG G++V TAD TVLA + I RATNNVAEY GL+ L A Sbjct 17 EVAVECDGGSRGNPGTAGAGSLVLTADRRTVLATCHEYIPRATNNVAEYTGLVNALTLAR 76 Query 62 KLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTY 121 LGA V MDSKLVVEQMSGRWK+KHPD+ L +AL F ++Y WVPRA N Sbjct 77 DLGARRVHVHMDSKLVVEQMSGRWKIKHPDMKPLAATVKALEKDFDAVDYTWVPRADNAR 136 Query 122 ADRLANDAMDAAAQ--------SAAADAD-PAK------IVATESPTSPGWTGARGTPTR 166 AD LAN AMD A AA+ AD PA AT +P W G PTR Sbjct 137 ADALANQAMDTKASGEELPSGGDAASGADAPATSGTGGDAAATSGDAAPSWMGDCDRPTR 196 Query 167 LLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDT 226 LLLLRHGQTELS + R+SG +P L G Q AA YLA RGGI AVV+SPL+R +T Sbjct 197 LLLLRHGQTELSAEGRFSGLSDPALTATGRDQARRAAAYLASRGGIDAVVTSPLRRTRET 256 Query 227 AVTAARALALD---VVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGE 283 A +L LD V D +VE DFG W G TFAE ER + H W+ D ++ GGE Sbjct 257 AAACVASLGLDEAAVTTDRGVVELDFGEWGGRTFAEVHERWADEHTAWMTDPTVPAVGGE 316 Query 284 SFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLS 343 S DV RV D I+ G TVLVVSHVTPIK +R AL A + + LHLDLASLS Sbjct 317 SLSDVDDRVAAAVDGIVDRNPGRTVLVVSHVTPIKATVRRALGASADIYRTLHLDLASLS 376 Query 344 IAEFYADGASSVRLVNQTGYL 364 + EFY DG S VRLVN T YL Sbjct 377 VVEFYPDGRSVVRLVNDTHYL 397 >gi|305681140|ref|ZP_07403947.1| ribonuclease HI [Corynebacterium matruchotii ATCC 14266] gi|305659345|gb|EFM48845.1| ribonuclease HI [Corynebacterium matruchotii ATCC 14266] Length=401 Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 196/396 (50%), Positives = 241/396 (61%), Gaps = 32/396 (8%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +K+VIEADGGSRGNPG AG G V++ AD +TV+ + +G ATNNVAEY L GL A Sbjct 1 MKLVIEADGGSRGNPGIAGSGTVIYEADGTTVVRKLAYVVGTATNNVAEYHALYNGLCVA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGAT+ +V MDSKLVVEQMSGRWK+KHPD+ +L ++ Q + + WVPR +N Sbjct 61 QQLGATDISVRMDSKLVVEQMSGRWKIKHPDMRELALKCQKILRTLHSAEFTWVPRRQNA 120 Query 121 YADRLANDAMDAAAQ-------------------------------SAAADADPAKIVAT 149 AD LAN AMDA A + DA +K A Sbjct 121 AADALANLAMDAGATGHPIGFLTLDNDATEDVTETADIADITPTMATPMTDAAGSKATAA 180 Query 150 ESPTSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARR 209 E+P W GA TR+LLLRHGQT +S +R+YSG NP L E+G Q AA +A Sbjct 181 ETPAPTTWNGATTNATRMLLLRHGQTTMSRRRQYSGLSNPPLTELGEWQASRAAHRIAAA 240 Query 210 GGI-AAVVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELH 268 I A+++SPL R TA T A L L V + LVE DFG W+GLTFA+A DP+LH Sbjct 241 DDIPTAIIASPLARCQQTAQTVADLLNLPVNTEPGLVELDFGQWDGLTFAQANAADPKLH 300 Query 269 RRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAG 328 RWL D ++ PGGES RV R R+ Y+G T+LVVSHVTPIK +L ALDA Sbjct 301 ARWLLDPTLPAPGGESLAQAHERVTAARKRLQERYQGCTILVVSHVTPIKSILGQALDAA 360 Query 329 SGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL 364 + + +RLHLDLASLSIAEFYADG + VRLVN T YL Sbjct 361 ANIYHRLHLDLASLSIAEFYADGPTCVRLVNDTSYL 396 >gi|269125916|ref|YP_003299286.1| phosphoglycerate mutase [Thermomonospora curvata DSM 43183] gi|268310874|gb|ACY97248.1| Phosphoglycerate mutase [Thermomonospora curvata DSM 43183] Length=378 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 197/369 (54%), Positives = 246/369 (67%), Gaps = 10/369 (2%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 K+++EADGGSRGNPGPAGYGA+V A VLAE +AIG ATNNVAEYRGLIAGL A Sbjct 11 KLIVEADGGSRGNPGPAGYGALVRDALTGEVLAEVAEAIGHATNNVAEYRGLIAGLRAAA 70 Query 62 KLG-ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 ++ A V MDSKLVVEQMSGRWK++HPDL+ L +QA+ A+ ++Y WVPR RN Sbjct 71 EVDPAARVEVRMDSKLVVEQMSGRWKIRHPDLMPLALQARDAAAALGAVSYTWVPRDRNA 130 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESP-----TSPGWTGARGTPTRLLLLRHGQT 175 +ADRLAN+AMDAAA+ + K+ +SP T+P W+ A PT LLLRHGQT Sbjct 131 HADRLANEAMDAAAR---GEPWTRKVTGNDSPKPAASTAPAWSKAASAPTTTLLLRHGQT 187 Query 176 ELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALA 235 LS +RR++G G+ L EVG Q AAA L RG + +V+SPL R DTA A A Sbjct 188 PLSIERRFAGTGDVPLTEVGREQARAAARALKDRG-LDVIVTSPLTRCRDTAAEVAAATG 246 Query 236 LDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRG 295 V +++ ETDFGAWEGLTF E ER P WL D + PPGGESF+ V RRVR Sbjct 247 APVRIEEGFRETDFGAWEGLTFGEVRERWPREMEAWLADPAAAPPGGESFEQVARRVRTA 306 Query 296 RDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASSV 355 D++ V + VLVVSHVTPIK+L+R AL A LYR+HLD++SL+ ++YADG + + Sbjct 307 LDKLTVRHRHQKVLVVSHVTPIKLLVREALQAPMDALYRMHLDVSSLTQIDWYADGPAVL 366 Query 356 RLVNQTGYL 364 R N T +L Sbjct 367 RAFNDTHHL 375 >gi|339298765|gb|AEJ50875.1| bifunctional RNase H/acid phosphatase [Mycobacterium tuberculosis CCDC5180] Length=241 Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 187/195 (96%), Positives = 189/195 (97%), Gaps = 0/195 (0%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA Sbjct 1 MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT Sbjct 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ Sbjct 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGARGTPTRLLLLRHGQTELSEQ 180 Query 181 RRYSGRGNPGLNEVG 195 RRYSG PG+ G Sbjct 181 RRYSGARQPGVERGG 195 >gi|72162352|ref|YP_290009.1| bifunctional RNase H/acid phosphatase [Thermobifida fusca YX] gi|71916084|gb|AAZ55986.1| conserved hypothetical protein [Thermobifida fusca YX] Length=382 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 197/374 (53%), Positives = 245/374 (66%), Gaps = 12/374 (3%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 ++VIEADG SRGNPGPAGYGA V AD +LAE IG ATNNVAEYRGLIAGL+ A Sbjct 8 RIVIEADGASRGNPGPAGYGARVRDADTGELLAEVASPIGEATNNVAEYRGLIAGLEAAA 67 Query 62 KLGATEAA-VLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 + T A V MDSKLVVEQMSGRWK+KHP L L QA+ +A+ + Y WVPR +N Sbjct 68 AIDPTAAVEVRMDSKLVVEQMSGRWKIKHPALQPLARQARQVAASLASVTYRWVPREQNA 127 Query 121 YADRLANDAMDAAAQS----------AAADADPAKIVATESPTSPGWTGARGTPTRLLLL 170 ADRLAN+A+D A ++ AA +P T+ GW A PTRLLLL Sbjct 128 QADRLANEALDGAVRNWSTQRTEPVQAAEPVEPPVDQGKTDGTALGWGPADTNPTRLLLL 187 Query 171 RHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTA 230 RHGQT +S +RR++G G+ L EVG Q AAA LA+R + VVSSPL+R DTA Sbjct 188 RHGQTPMSVERRFAGIGDIPLTEVGHEQAKAAARRLAQRP-VDVVVSSPLRRTLDTAQYV 246 Query 231 ARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLR 290 A+ LDV V++D E DFGAWEG+TFAEA + P+ RWL D + PPGGESF +V R Sbjct 247 AKECGLDVEVEEDFREADFGAWEGMTFAEARKHSPQEFHRWLSDPHVPPPGGESFAEVSR 306 Query 291 RVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYAD 350 RV R RDR++ + G TV+VV+HVTPIK+L++ A+ A LYR+HLD+A L ++D Sbjct 307 RVTRARDRVLARHRGRTVVVVTHVTPIKLLVQQAMLAPLPALYRMHLDVACLCEVHCFSD 366 Query 351 GASSVRLVNQTGYL 364 G VR +N TG+L Sbjct 367 GPMVVRSLNDTGHL 380 >gi|225021833|ref|ZP_03711025.1| hypothetical protein CORMATOL_01864 [Corynebacterium matruchotii ATCC 33806] gi|224945381|gb|EEG26590.1| hypothetical protein CORMATOL_01864 [Corynebacterium matruchotii ATCC 33806] Length=401 Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 195/396 (50%), Positives = 240/396 (61%), Gaps = 32/396 (8%) Query 1 VKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 +K+VIEADGGSRGNPG AG G V++ AD +TV+ + +G ATNNVAEY L GL A Sbjct 1 MKLVIEADGGSRGNPGIAGSGTVIYEADGTTVVRKLAYVVGTATNNVAEYHALYNGLCVA 60 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 +LGAT+ +V MDSKLVVEQMSGRWK+KHPD+ +L ++ Q + + WVPR +N Sbjct 61 QQLGATDISVRMDSKLVVEQMSGRWKIKHPDMRELALKCQKILRTLHSAEFTWVPRRQNA 120 Query 121 YADRLANDAMDAAAQ-------------------------------SAAADADPAKIVAT 149 AD LAN AMDA A + DA +K A Sbjct 121 AADALANLAMDAGATGHPIGFLTLDNDATEDVTETADIADITPTMATPMTDAAGSKATAA 180 Query 150 ESPTSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGNPGLNEVG-WRQVGAAAGYLAR 208 E+P W GA TR+LLLRHGQT +S +R+YSG NP L E+G W+ AA A Sbjct 181 ETPAPTTWNGATTNATRMLLLRHGQTTMSRRRQYSGLSNPPLTELGEWQASRAAHRIAAA 240 Query 209 RGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELH 268 A+++SPL R TA T A L L V + LVE DFG W+GLTFA+A DP+LH Sbjct 241 ADIPTAIIASPLARCQQTAQTVADLLNLPVNTEPGLVELDFGQWDGLTFAQANAADPKLH 300 Query 269 RRWLQDTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAG 328 RWL D ++ PGGES RV R R+ Y+G T+LVVSHVTPIK +L ALDA Sbjct 301 ARWLLDPTLPAPGGESLAQAHERVTAARKRLQERYQGCTILVVSHVTPIKSILGQALDAA 360 Query 329 SGVLYRLHLDLASLSIAEFYADGASSVRLVNQTGYL 364 + + +RLHLDLASLSIAEFYADG + VRLVN T YL Sbjct 361 ANIYHRLHLDLASLSIAEFYADGPTCVRLVNDTSYL 396 >gi|336178893|ref|YP_004584268.1| phosphoglycerate mutase [Frankia symbiont of Datisca glomerata] gi|334859873|gb|AEH10347.1| Phosphoglycerate mutase [Frankia symbiont of Datisca glomerata] Length=380 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 189/365 (52%), Positives = 231/365 (64%), Gaps = 12/365 (3%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGL-DDA 60 ++V+EADGGSRGNPGPAGYGA+V AD VLAE AIGRATNNVAEY+GLIAGL A Sbjct 8 RLVVEADGGSRGNPGPAGYGALVRDADTGAVLAERAGAIGRATNNVAEYQGLIAGLRAAA 67 Query 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 + V MDSKLVVEQMSGRWK+KHP + L QA +A +F R+ Y W+PR RN Sbjct 68 DLAPDADVEVRMDSKLVVEQMSGRWKIKHPAMRPLATQAADVAREFPRVRYTWIPRERNA 127 Query 121 YADRLANDAMDAAAQSAAADADPAKIVATESPTSP------GWTGARGTPTRLLLLRHGQ 174 +ADRLAN+AMDAAAQ + + T+P GW PT +LLRHGQ Sbjct 128 HADRLANEAMDAAAQGRTWEPPEPQSPEPVPHTAPTTHRLSGWMAPPAPPTTTVLLRHGQ 187 Query 175 TELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARAL 234 T +S ++R+SG + L ++G Q A AG L R V S L+RA TA AL Sbjct 188 TPMSVEKRFSGTVDATLTDIGQAQALAVAGRL-RDVPFDVVYCSQLKRARQTA----DAL 242 Query 235 ALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRR 294 D ++DDDL ETDFG WE LTF E +R P+ WL D S+ PPGGES +RRV Sbjct 243 GRDYLIDDDLRETDFGTWETLTFGEVRQRFPDELNAWLADPSVAPPGGESILATIRRVTA 302 Query 295 GRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASLSIAEFYADGASS 354 RDRI+ + G +L+VSHVTPIK L LALDA VLYRLHLDL S+S ++Y+DG + Sbjct 303 VRDRILAAHPGERILIVSHVTPIKTLTLLALDASPAVLYRLHLDLVSISTIDWYSDGPAV 362 Query 355 VRLVN 359 +R N Sbjct 363 LRSFN 367 >gi|345014665|ref|YP_004817019.1| phosphoglycerate mutase [Streptomyces violaceusniger Tu 4113] gi|344041014|gb|AEM86739.1| Phosphoglycerate mutase [Streptomyces violaceusniger Tu 4113] Length=391 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 200/389 (52%), Positives = 252/389 (65%), Gaps = 28/389 (7%) Query 2 KVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAV 61 + V+EADGGSRGNPGPAGYGAVV A+ LAE + IG ATNNVAEY+GLIAGL A Sbjct 4 RFVVEADGGSRGNPGPAGYGAVVLDAETGEPLAEVAEYIGTATNNVAEYKGLIAGLRAAY 63 Query 62 KLGA-TEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 L E V MDSKLV+EQMSGRWK+KHPD+ L +A+A+ + + YEW+PR +N Sbjct 64 ALDPEAEVRVRMDSKLVIEQMSGRWKIKHPDMRPLAAEAKAIMPPGQ-LAYEWIPREKNK 122 Query 121 YADRLANDAMDAAAQ---------------------SAAADADPAKIVATESPTSPGWTG 159 +ADRLAN+AMDA + +A AD A+ AT +P GW Sbjct 123 HADRLANEAMDAGKRGEQWQPKVPPGGTLAAGAPEAAAPADDALAEPAATGAPAV-GWGS 181 Query 160 AR-GTPTRLLLLRHGQTELSEQRRYSGRG--NPGLNEVGWRQVGAAAGYLARRGGIAAVV 216 A GTP +LLRHG+T L+ ++R+SG G +PGL++VG Q A LA RG I A+V Sbjct 182 ADLGTPATFVLLRHGETPLTPEKRFSGSGGTDPGLSDVGRHQAERVAAALAARGTIQAIV 241 Query 217 SSPLQRAYDTAVTAARALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQDTS 276 +SPL+R +TA AR L LDV V++ L ETDFGAWEGLTFAE ER P+ WL + Sbjct 242 TSPLRRCRETADAVARRLGLDVRVEEGLRETDFGAWEGLTFAEVKERYPDDLEAWLASSK 301 Query 277 ITPP-GGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLALDAGSGVLYRL 335 + P GGESF V RRV RD++I Y G TVL+V+HVTPIK L+RLAL A L+R+ Sbjct 302 VAPTGGGESFAAVTRRVALSRDKLIARYTGRTVLLVTHVTPIKTLVRLALGAPPEALFRM 361 Query 336 HLDLASLSIAEFYADGASSVRLVNQTGYL 364 L ASLS +YADG +S+RL+N+T +L Sbjct 362 ELSAASLSAVAYYADGNASLRLLNETAHL 390 Lambda K H 0.317 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 685166507650 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40