BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2237
Length=255
Score E
Sequences producing significant alignments: (Bits) Value
gi|289758359|ref|ZP_06517737.1| conserved hypothetical protein [... 523 1e-146
gi|15841729|ref|NP_336766.1| hypothetical protein MT2296 [Mycoba... 521 3e-146
gi|15609374|ref|NP_216753.1| hypothetical protein Rv2237 [Mycoba... 520 8e-146
gi|340627241|ref|YP_004745693.1| hypothetical protein MCAN_22591... 519 2e-145
gi|118617013|ref|YP_905345.1| hypothetical protein MUL_1316 [Myc... 453 1e-125
gi|183983302|ref|YP_001851593.1| hypothetical protein MMAR_3312 ... 450 1e-124
gi|342857258|ref|ZP_08713914.1| hypothetical protein MCOL_00230 ... 438 4e-121
gi|41408086|ref|NP_960922.1| hypothetical protein MAP1988 [Mycob... 436 1e-120
gi|254774912|ref|ZP_05216428.1| hypothetical protein MaviaA2_095... 424 6e-117
gi|118466074|ref|YP_881411.1| hypothetical protein MAV_2203 [Myc... 423 1e-116
gi|296166127|ref|ZP_06848572.1| conserved hypothetical protein [... 414 8e-114
gi|333990300|ref|YP_004522914.1| hypothetical protein JDM601_166... 388 3e-106
gi|229491779|ref|ZP_04385600.1| conserved hypothetical protein [... 261 7e-68
gi|226308995|ref|YP_002768955.1| hypothetical protein RER_55080 ... 261 1e-67
gi|111022306|ref|YP_705278.1| hypothetical protein RHA1_ro05340 ... 257 1e-66
gi|289748046|ref|ZP_06507424.1| conserved hypothetical protein [... 252 3e-65
gi|15607417|ref|NP_214790.1| hypothetical protein Rv0276 [Mycoba... 252 4e-65
gi|340625312|ref|YP_004743764.1| hypothetical protein MCAN_02831... 252 4e-65
gi|54026721|ref|YP_120963.1| hypothetical protein nfa47470 [Noca... 247 9e-64
gi|333918388|ref|YP_004491969.1| hypothetical protein AS9A_0715 ... 247 1e-63
gi|118466939|ref|YP_884002.1| hypothetical protein MAV_4880 [Myc... 246 2e-63
gi|183980565|ref|YP_001848856.1| hypothetical protein MMAR_0537 ... 246 2e-63
gi|333989562|ref|YP_004522176.1| hypothetical protein JDM601_092... 246 3e-63
gi|254777322|ref|ZP_05218838.1| hypothetical protein MaviaA2_219... 246 3e-63
gi|333991542|ref|YP_004524156.1| hypothetical protein JDM601_290... 244 9e-63
gi|118616915|ref|YP_905247.1| hypothetical protein MUL_1201 [Myc... 244 1e-62
gi|120401435|ref|YP_951264.1| hypothetical protein Mvan_0410 [My... 243 2e-62
gi|226364850|ref|YP_002782632.1| hypothetical protein ROP_54400 ... 241 6e-62
gi|108797348|ref|YP_637545.1| hypothetical protein Mmcs_0368 [My... 241 9e-62
gi|254821575|ref|ZP_05226576.1| hypothetical protein MintA_16697... 239 3e-61
gi|41409822|ref|NP_962658.1| hypothetical protein MAP3724 [Mycob... 238 6e-61
gi|254427056|ref|ZP_05040763.1| hypothetical protein ADG881_286 ... 237 1e-60
gi|145220934|ref|YP_001131612.1| hypothetical protein Mflv_0330 ... 237 1e-60
gi|118467455|ref|YP_885024.1| hypothetical protein MSMEG_0613 [M... 236 2e-60
gi|296167570|ref|ZP_06849907.1| conserved hypothetical protein [... 234 6e-60
gi|54027031|ref|YP_121273.1| hypothetical protein nfa50570 [Noca... 233 2e-59
gi|257056043|ref|YP_003133875.1| hypothetical protein Svir_20310... 233 2e-59
gi|342859247|ref|ZP_08715901.1| hypothetical protein MCOL_10223 ... 233 3e-59
gi|54026718|ref|YP_120960.1| hypothetical protein nfa47440 [Noca... 230 2e-58
gi|118473088|ref|YP_887893.1| hypothetical protein MSMEG_3590 [M... 230 2e-58
gi|169631406|ref|YP_001705055.1| hypothetical protein MAB_4329c ... 229 2e-58
gi|240168496|ref|ZP_04747155.1| hypothetical protein MkanA1_0423... 229 2e-58
gi|254823232|ref|ZP_05228233.1| hypothetical protein MintA_25104... 229 4e-58
gi|325673329|ref|ZP_08153021.1| hypothetical protein HMPREF0724_... 227 1e-57
gi|312137904|ref|YP_004005240.1| hypothetical protein REQ_04160 ... 226 3e-57
gi|300790162|ref|YP_003770453.1| hypothetical protein AMED_8355 ... 224 1e-56
gi|326383584|ref|ZP_08205270.1| hypothetical protein SCNU_11635 ... 221 8e-56
gi|315442001|ref|YP_004074880.1| hypothetical protein Mspyr1_033... 220 1e-55
gi|145221027|ref|YP_001131705.1| hypothetical protein Mflv_0423 ... 220 2e-55
gi|342861262|ref|ZP_08717910.1| hypothetical protein MCOL_20361 ... 220 2e-55
>gi|289758359|ref|ZP_06517737.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308232074|ref|ZP_07663994.1| hypothetical protein TMAG_00429 [Mycobacterium tuberculosis SUMu001]
gi|308369666|ref|ZP_07666778.1| hypothetical protein TMBG_00787 [Mycobacterium tuberculosis SUMu002]
19 more sequence titles
Length=296
Score = 523 bits (1346), Expect = 1e-146, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI
Sbjct 42 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 101
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY
Sbjct 102 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 161
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA
Sbjct 162 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 221
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY
Sbjct 222 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 281
Query 241 LWDMRFRARHGRRIV 255
LWDMRFRARHGRRIV
Sbjct 282 LWDMRFRARHGRRIV 296
>gi|15841729|ref|NP_336766.1| hypothetical protein MT2296 [Mycobacterium tuberculosis CDC1551]
gi|148823445|ref|YP_001288199.1| hypothetical protein TBFG_12266 [Mycobacterium tuberculosis F11]
gi|167969362|ref|ZP_02551639.1| hypothetical protein MtubH3_15580 [Mycobacterium tuberculosis
H37Ra]
25 more sequence titles
Length=271
Score = 521 bits (1342), Expect = 3e-146, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI
Sbjct 17 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 76
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY
Sbjct 77 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 136
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA
Sbjct 137 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 196
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY
Sbjct 197 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 256
Query 241 LWDMRFRARHGRRIV 255
LWDMRFRARHGRRIV
Sbjct 257 LWDMRFRARHGRRIV 271
>gi|15609374|ref|NP_216753.1| hypothetical protein Rv2237 [Mycobacterium tuberculosis H37Rv]
gi|31793417|ref|NP_855910.1| hypothetical protein Mb2261 [Mycobacterium bovis AF2122/97]
gi|121638119|ref|YP_978343.1| hypothetical protein BCG_2254 [Mycobacterium bovis BCG str. Pasteur
1173P2]
30 more sequence titles
Length=255
Score = 520 bits (1339), Expect = 8e-146, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI
Sbjct 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY
Sbjct 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA
Sbjct 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY
Sbjct 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
Query 241 LWDMRFRARHGRRIV 255
LWDMRFRARHGRRIV
Sbjct 241 LWDMRFRARHGRRIV 255
>gi|340627241|ref|YP_004745693.1| hypothetical protein MCAN_22591 [Mycobacterium canettii CIPT
140010059]
gi|340005431|emb|CCC44591.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=255
Score = 519 bits (1336), Expect = 2e-145, Method: Compositional matrix adjust.
Identities = 254/255 (99%), Positives = 254/255 (99%), Gaps = 0/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI
Sbjct 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
RGAVDVAHRQVRST SSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY
Sbjct 61 RGAVDVAHRQVRSTTSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA
Sbjct 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY
Sbjct 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
Query 241 LWDMRFRARHGRRIV 255
LWDMRFRARHGRRIV
Sbjct 241 LWDMRFRARHGRRIV 255
>gi|118617013|ref|YP_905345.1| hypothetical protein MUL_1316 [Mycobacterium ulcerans Agy99]
gi|118569123|gb|ABL03874.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=271
Score = 453 bits (1166), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 216/248 (88%), Positives = 233/248 (94%), Gaps = 0/248 (0%)
Query 8 VIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVA 67
VIMQL++PGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIG+ESDRALIR AVD
Sbjct 24 VIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGSESDRALIRAAVDSV 83
Query 68 HRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLG 127
HRQVRST+SSPVSYNAFDPKLQLWVAACLYRYFV+QHEFL+GPL+D AD+VY DAKRLG
Sbjct 84 HRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLG 143
Query 128 TTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNL 187
TTLQVPE MWPPDR+AFDEYWKRSLD L ID PVREHLRGVAS+AFLPWPLRA+AGPFNL
Sbjct 144 TTLQVPERMWPPDRIAFDEYWKRSLDELHIDPPVREHLRGVASMAFLPWPLRALAGPFNL 203
Query 188 FATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDMRFR 247
FATTGFLAPEFRAMM+L+WSQ+QQ RFEWLL+ LRLADRLIPHRAWI +YQLYLWDMRFR
Sbjct 204 FATTGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLYLWDMRFR 263
Query 248 ARHGRRIV 255
AR G R+V
Sbjct 264 ARRGWRVV 271
>gi|183983302|ref|YP_001851593.1| hypothetical protein MMAR_3312 [Mycobacterium marinum M]
gi|183176628|gb|ACC41738.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=271
Score = 450 bits (1157), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 215/248 (87%), Positives = 232/248 (94%), Gaps = 0/248 (0%)
Query 8 VIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVA 67
VIMQL++PGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIG+ESDRALIR AVD
Sbjct 24 VIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGSESDRALIRAAVDSV 83
Query 68 HRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLG 127
HRQVRST+SSPVSYNAFDPKLQLWVAACLYRYFV+QHEFL+GPL+D AD+VY DAKRLG
Sbjct 84 HRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLG 143
Query 128 TTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNL 187
TTLQVPE MWPPDR+AF EYWKRSLD L ID PVREHLRGVAS+AFLPWPLRA+AGPFNL
Sbjct 144 TTLQVPERMWPPDRIAFVEYWKRSLDELHIDPPVREHLRGVASMAFLPWPLRALAGPFNL 203
Query 188 FATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDMRFR 247
FATTGFLAPEFRAMM+L+WSQ+QQ RFEWLL+ LRLADRLIPHRAWI +YQLYLWDMRFR
Sbjct 204 FATTGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLYLWDMRFR 263
Query 248 ARHGRRIV 255
AR G R+V
Sbjct 264 ARRGWRVV 271
>gi|342857258|ref|ZP_08713914.1| hypothetical protein MCOL_00230 [Mycobacterium colombiense CECT
3035]
gi|342134591|gb|EGT87757.1| hypothetical protein MCOL_00230 [Mycobacterium colombiense CECT
3035]
Length=271
Score = 438 bits (1126), Expect = 4e-121, Method: Compositional matrix adjust.
Identities = 212/248 (86%), Positives = 227/248 (92%), Gaps = 0/248 (0%)
Query 8 VIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVA 67
VIMQL++PGVGYGVLESPVDSGNVYKHPFKRARTTGTYLA ATIGT DR LI AVDVA
Sbjct 24 VIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTAYDRTLICAAVDVA 83
Query 68 HRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLG 127
HRQVRST+SSPVSYNAFDPKLQLWVAACLYRYFVDQHEFL+GPL+DATADAVYQDA RLG
Sbjct 84 HRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDDATADAVYQDASRLG 143
Query 128 TTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNL 187
TTLQVPE MWPPDR AFDEYWKRSLD L+ID PVREHLRGVA++AFLPWP+R +AGPFNL
Sbjct 144 TTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLRGVAALAFLPWPVRVLAGPFNL 203
Query 188 FATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDMRFR 247
FATTGFLAPEFR +M L+WS +QRRF WLL+ LRLADRLIPHRAWIF Y+LYLWDMR R
Sbjct 204 FATTGFLAPEFRELMGLDWSPGRQRRFGWLLAALRLADRLIPHRAWIFGYRLYLWDMRSR 263
Query 248 ARHGRRIV 255
AR GRRIV
Sbjct 264 ARQGRRIV 271
>gi|41408086|ref|NP_960922.1| hypothetical protein MAP1988 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396441|gb|AAS04305.1| hypothetical protein MAP_1988 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461848|gb|EGO40704.1| hypothetical protein MAPs_26850 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=271
Score = 436 bits (1122), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 213/254 (84%), Positives = 229/254 (91%), Gaps = 0/254 (0%)
Query 2 LLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIR 61
LLPAANVIMQL++PGVGYGVLESPVDSGNVYKHPFKRARTTGTYLA ATIGT+ DRALI
Sbjct 18 LLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDYDRALIC 77
Query 62 GAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQ 121
AVDVAHRQVRS SSPVSYNAFDPKLQLWVAACLYRYFVDQHEFL+GPL++A+ADAVY+
Sbjct 78 AAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYR 137
Query 122 DAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAV 181
DA RLGTTLQVPE MWPP R AFDEYWKRSLD L+ID PVREHL GVAS+AFLPWPLR +
Sbjct 138 DAARLGTTLQVPERMWPPARAAFDEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVL 197
Query 182 AGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYL 241
AGPFNLFATTGFLAPEFR MMQL+W+ AQQRRF WLL LRLADRLIPH WI Y++YL
Sbjct 198 AGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLADRLIPHWVWILGYRIYL 257
Query 242 WDMRFRARHGRRIV 255
WDMR RAR GRR+V
Sbjct 258 WDMRSRARQGRRVV 271
>gi|254774912|ref|ZP_05216428.1| hypothetical protein MaviaA2_09595 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=271
Score = 424 bits (1090), Expect = 6e-117, Method: Compositional matrix adjust.
Identities = 206/243 (85%), Positives = 221/243 (91%), Gaps = 0/243 (0%)
Query 2 LLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIR 61
LLPAANVIMQL++PGVGYGVLESPVDSGNVYKHPFKRARTTGTYLA ATIGT+ DRALI
Sbjct 18 LLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDYDRALIC 77
Query 62 GAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQ 121
AVDVAHRQVRS SSPVSYNAFDPKLQLWVAACLYRYFVDQHEFL+GPL++A+ADAVY+
Sbjct 78 AAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYR 137
Query 122 DAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAV 181
DA RLGTTLQVPE MWPPDR AFDEYWKRSLD L+ID PVREHL GVAS+AFLPWPLR +
Sbjct 138 DAARLGTTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVL 197
Query 182 AGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYL 241
AGPFNLFATTGFLAPEFR MMQL+W+ AQQRRF WLL LRLADRLIPH WI Y++YL
Sbjct 198 AGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLADRLIPHGVWILGYRIYL 257
Query 242 WDM 244
WDM
Sbjct 258 WDM 260
>gi|118466074|ref|YP_881411.1| hypothetical protein MAV_2203 [Mycobacterium avium 104]
gi|118167361|gb|ABK68258.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=271
Score = 423 bits (1088), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 205/243 (85%), Positives = 220/243 (91%), Gaps = 0/243 (0%)
Query 2 LLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIR 61
LLPAANVIMQL++PGVGYGVLESPVDSGNVYKHPFKRARTTGTYLA ATIGT+ DRALI
Sbjct 18 LLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDYDRALIC 77
Query 62 GAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQ 121
AVDVAHRQVRS SSPVSYNAFDPKLQLWVAACLYRYFVDQHEFL+GPL++A+ADAVY+
Sbjct 78 AAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYR 137
Query 122 DAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAV 181
DA RLGTTLQVPE MWPPDR AFDEYWKRSLD L+ID PVREHL GVAS+AFLPWPLR +
Sbjct 138 DAARLGTTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVL 197
Query 182 AGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYL 241
AGPFNLFATTGFLAPEFR MMQL+W+ QQRRF WLL LRLADRLIPH WI Y++YL
Sbjct 198 AGPFNLFATTGFLAPEFREMMQLDWTPGQQRRFGWLLFSLRLADRLIPHGVWILGYRIYL 257
Query 242 WDM 244
WDM
Sbjct 258 WDM 260
>gi|296166127|ref|ZP_06848572.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898536|gb|EFG78097.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=276
Score = 414 bits (1063), Expect = 8e-114, Method: Compositional matrix adjust.
Identities = 197/237 (84%), Positives = 216/237 (92%), Gaps = 0/237 (0%)
Query 8 VIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDVA 67
VIMQLA+PGVGYGVLESP+DSGNVYKHPFKRARTTGTYLAVA IGTESDRALIRGAVD
Sbjct 29 VIMQLALPGVGYGVLESPIDSGNVYKHPFKRARTTGTYLAVAAIGTESDRALIRGAVDAV 88
Query 68 HRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLG 127
HRQVRST+SSPV YNAFDPKLQLWVAACLYRYFVDQHEFL+GPL+ A ADAVY +A+RLG
Sbjct 89 HRQVRSTSSSPVPYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDGAAADAVYLNARRLG 148
Query 128 TTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNL 187
TTLQVPE MWPPDR AFDEYWKR+LD L+ID PVREHLRGVAS+AFLPWP+R +AG FNL
Sbjct 149 TTLQVPERMWPPDRAAFDEYWKRTLDELRIDPPVREHLRGVASLAFLPWPVRVLAGRFNL 208
Query 188 FATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
FATTGFLAPEFRA+M+L+WS AQQR+FEWLLS LRLAD +PH W+ YQ+YLWDM
Sbjct 209 FATTGFLAPEFRALMRLDWSAAQQRQFEWLLSALRLADLFLPHGIWLLGYQIYLWDM 265
>gi|333990300|ref|YP_004522914.1| hypothetical protein JDM601_1660 [Mycobacterium sp. JDM601]
gi|333486268|gb|AEF35660.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=269
Score = 388 bits (997), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 199/255 (79%), Positives = 219/255 (86%), Gaps = 1/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
MLLPAANVIMQL++PGVGYGV ES VDSGNVYKHPFKRARTTGTYLAVATIGT+ DR L
Sbjct 16 MLLPAANVIMQLSLPGVGYGVQESRVDSGNVYKHPFKRARTTGTYLAVATIGTDEDRELY 75
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R VD HRQVRST SPV Y+AFDP+LQLWVAACLYRYFVDQHEFL+GPL+ A ADA+Y
Sbjct 76 REWVDGVHRQVRSTPESPVRYHAFDPRLQLWVAACLYRYFVDQHEFLHGPLDAAAADAIY 135
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
DAK+LGTTLQV + MWP DR AFDEYWKRSLD L+ID PVREHL GVAS+ FLPWPLR
Sbjct 136 ADAKKLGTTLQVSDEMWPADRAAFDEYWKRSLDELRIDPPVREHLYGVASMVFLPWPLR- 194
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
+AGP NLFATTGFL EFR +M+L+WS +QQRRFEWLLS LRLADRLIP RAW+ Y +Y
Sbjct 195 LAGPLNLFATTGFLPAEFRQLMKLDWSASQQRRFEWLLSALRLADRLIPQRAWLLGYHVY 254
Query 241 LWDMRFRARHGRRIV 255
LWDMRFRAR G R+V
Sbjct 255 LWDMRFRARTGMRVV 269
>gi|229491779|ref|ZP_04385600.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321460|gb|EEN87260.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=297
Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/251 (53%), Positives = 163/251 (65%), Gaps = 0/251 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA P VGYGV ES V++G + +HP KR RTT TYLAVA++ T+ ++ L
Sbjct 43 LLAAGANVIMQLARPAVGYGVYESKVETGRLDRHPVKRTRTTLTYLAVASLATDEEKKLY 102
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ +H+ VRS +S V YNAFDP+LQLWVAACLYR F D ++ LYG L+ T DA Y
Sbjct 103 RRAVNGSHKHVRSDENSAVEYNAFDPELQLWVAACLYRGFEDVYKILYGDLDPVTRDAFY 162
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
Q + GTTLQ+ MWP DR AF+ YW +LD + ID +REHL G+AS F P L
Sbjct 163 QRSATFGTTLQMRRDMWPADRDAFEVYWNENLDKVAIDETIREHLYGIASATFTPKLLHP 222
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
V GP N F TTGFL FR M+L WS QQR F+ + V L +R P +F Y Y
Sbjct 223 VVGPLNRFVTTGFLPQAFRDEMRLPWSVRQQRNFDRSMRVAALVNRFSPKILRMFPYNFY 282
Query 241 LWDMRFRARHG 251
LWD+R R G
Sbjct 283 LWDLRRRIAKG 293
>gi|226308995|ref|YP_002768955.1| hypothetical protein RER_55080 [Rhodococcus erythropolis PR4]
gi|226188112|dbj|BAH36216.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=308
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/251 (53%), Positives = 163/251 (65%), Gaps = 0/251 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA P VGYGV ES V++G + +HP KR RTT TYLAVA++ T+ ++ L
Sbjct 54 LLAAGANVIMQLARPAVGYGVYESKVETGRLDRHPVKRTRTTLTYLAVASLATDEEKKLY 113
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ +H+ VRS +S V YNAFDP+LQLWVAACLYR F D ++ LYG L+ T DA Y
Sbjct 114 RRAVNGSHKHVRSDENSAVEYNAFDPELQLWVAACLYRGFEDVYKILYGDLDPLTQDAFY 173
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
Q + GTTLQ+ MWP DR AF+ YW +LD + ID +REHL G+AS F P L
Sbjct 174 QRSATFGTTLQMRRDMWPADRDAFEVYWNENLDKVAIDETIREHLYGIASATFAPKLLHP 233
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
V GP N F TTGFL FR M+L WS QQR F+ + V L +R P +F Y Y
Sbjct 234 VVGPLNRFVTTGFLPQAFRDEMRLPWSVRQQRNFDRSMRVAALVNRFSPKILRMFPYNFY 293
Query 241 LWDMRFRARHG 251
LWD+R R G
Sbjct 294 LWDLRRRIAKG 304
>gi|111022306|ref|YP_705278.1| hypothetical protein RHA1_ro05340 [Rhodococcus jostii RHA1]
gi|110821836|gb|ABG97120.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=274
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/255 (51%), Positives = 168/255 (66%), Gaps = 0/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L AAN+IMQLA PGVGYGV ES V+SG +++HP KR RTT TYL VA GT+ ++A
Sbjct 20 LLAGAANIIMQLAHPGVGYGVYESKVESGQLFRHPIKRTRTTLTYLVVAARGTDEEKAAF 79
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R V+ AH +VRST SPV YNAFDP+LQLWVAAC+YR F D + L+G L A A+ Y
Sbjct 80 RKGVNRAHAKVRSTPDSPVQYNAFDPELQLWVAACIYRGFEDVNRALHGDLPPAAAEFFY 139
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
++ GTTLQVP MWP DRVAF+EYW ++LD + ID +REH+ +A + FLP +
Sbjct 140 KEGATFGTTLQVPPDMWPEDRVAFEEYWNKALDKVSIDDTIREHVLSIAQLEFLPAIVSR 199
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
+ G N+F T GFL +FR M L W+ Q+RF+ L + R IP R F Y L
Sbjct 200 LFGRLNMFFTNGFLPQQFRDEMHLTWTDKDQQRFDRTLRTIGTLSRRIPVRIREFPYNLL 259
Query 241 LWDMRFRARHGRRIV 255
++D+R R + G+ +V
Sbjct 260 MFDLRRRMKAGKPLV 274
>gi|289748046|ref|ZP_06507424.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289688574|gb|EFD56062.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=309
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/263 (52%), Positives = 173/263 (66%), Gaps = 12/263 (4%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G++ +A
Sbjct 51 LLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAF 110
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D AD Y
Sbjct 111 RRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHY 170
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL--------RGVASVA 172
+ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L RG+A
Sbjct 171 RAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIA--- 227
Query 173 FLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRA 232
LP PLR ++ L TTGFL FR M+L W +QRRF+ L++VLR +RL+P
Sbjct 228 -LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFV 286
Query 233 WIFVYQLYLWDMRFRARHGRRIV 255
F + L LWD+ R R GR +V
Sbjct 287 REFPFNLMLWDLDRRMRRGRPLV 309
>gi|15607417|ref|NP_214790.1| hypothetical protein Rv0276 [Mycobacterium tuberculosis H37Rv]
gi|15839657|ref|NP_334694.1| hypothetical protein MT0288 [Mycobacterium tuberculosis CDC1551]
gi|31791454|ref|NP_853947.1| hypothetical protein Mb0282 [Mycobacterium bovis AF2122/97]
73 more sequence titles
Length=306
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/263 (52%), Positives = 173/263 (66%), Gaps = 12/263 (4%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G++ +A
Sbjct 48 LLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAF 107
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D AD Y
Sbjct 108 RRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHY 167
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL--------RGVASVA 172
+ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L RG+A
Sbjct 168 RAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIA--- 224
Query 173 FLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRA 232
LP PLR ++ L TTGFL FR M+L W +QRRF+ L++VLR +RL+P
Sbjct 225 -LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFV 283
Query 233 WIFVYQLYLWDMRFRARHGRRIV 255
F + L LWD+ R R GR +V
Sbjct 284 REFPFNLMLWDLDRRMRRGRPLV 306
>gi|340625312|ref|YP_004743764.1| hypothetical protein MCAN_02831 [Mycobacterium canettii CIPT
140010059]
gi|340003502|emb|CCC42623.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=306
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/259 (51%), Positives = 173/259 (67%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G++ +A
Sbjct 48 LLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAF 107
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D AD Y
Sbjct 108 RRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADRHY 167
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
++ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L +A++ LP
Sbjct 168 REGMAMGTTLQVPPQMWPPDRAAFDRYWQQSLDKVHIDDAVRDYLYPIAALRIPGIPLPG 227
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
PLR + L TTGFL FR M+L W +QRRF+ L++++R +RL+P F
Sbjct 228 PLRRRSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMALVRTVNRLMPRFVREFP 287
Query 237 YQLYLWDMRFRARHGRRIV 255
+ L LWD+ R R GR +V
Sbjct 288 FNLMLWDLDRRMRRGRPLV 306
>gi|54026721|ref|YP_120963.1| hypothetical protein nfa47470 [Nocardia farcinica IFM 10152]
gi|54018229|dbj|BAD59599.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=289
Score = 247 bits (631), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/250 (53%), Positives = 160/250 (64%), Gaps = 1/250 (0%)
Query 6 ANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVD 65
ANVIMQL+ P V YGVLES VDSG V HPFKR RTT TYLAVA +GT+++R R AV+
Sbjct 41 ANVIMQLSHPPVAYGVLESTVDSGKVTLHPFKRLRTTLTYLAVAMMGTDAEREAYREAVN 100
Query 66 VAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKR 125
+HR +RSTA SPV YNAFDPKLQLWVAACL+ +D E L+GPL+DATADA+Y + R
Sbjct 101 TSHRSIRSTAESPVKYNAFDPKLQLWVAACLFYGILDLEERLHGPLDDATADALYAYSAR 160
Query 126 LGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPF 185
LGTTLQ+ MWP DR AF EYW L IDA R + G+ + LP PLR + PF
Sbjct 161 LGTTLQMRPEMWPADRQAFQEYWTAELATKSIDARTRAYFDGLIDLTMLPLPLR-LNAPF 219
Query 186 NLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDMR 245
+ F TG L R M + WS ++ LL V+ R +P +F YLWD+R
Sbjct 220 HRFVVTGLLPEHLRDEMGMTWSPMREHALRLLLLVIGALHRRLPRALRLFPMNFYLWDLR 279
Query 246 FRARHGRRIV 255
R R G+ +V
Sbjct 280 RRLRAGKPLV 289
>gi|333918388|ref|YP_004491969.1| hypothetical protein AS9A_0715 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480609|gb|AEF39169.1| hypothetical protein AS9A_0715 [Amycolicicoccus subflavus DQS3-9A1]
Length=287
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/251 (51%), Positives = 160/251 (64%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
ANVIMQL++P VGYGV+ESPVDSG V HP KR RTT +YLAVA GTE +R R AV
Sbjct 37 TANVIMQLSLPPVGYGVVESPVDSGKVTLHPVKRLRTTLSYLAVALHGTEEERLRYREAV 96
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
+ +HRQ+RS SPV YNAF P+LQLWVAACLY VD E L+GP+ + ADA+Y
Sbjct 97 NQSHRQIRSRPGSPVKYNAFSPRLQLWVAACLYYGIVDMTERLHGPIPETDADALYDYCA 156
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
RLGTTLQ+P+ +WPPDR AFDEYW+ +L ID VR++L + + LP P+RA+A
Sbjct 157 RLGTTLQMPQELWPPDRAAFDEYWRHTLAATSIDDTVRDYLAELVDLKALPLPVRALAAR 216
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F TG L P R M+L WS+ +R L+ + + R +PH F YLWD
Sbjct 217 PQRFIATGLLPPHLRDEMRLPWSERDERILAKGLTAIGMVYRRLPHIVRRFPMNFYLWDT 276
Query 245 RFRARHGRRIV 255
R R R +V
Sbjct 277 RRRMRKNLPLV 287
>gi|118466939|ref|YP_884002.1| hypothetical protein MAV_4880 [Mycobacterium avium 104]
gi|118168226|gb|ABK69123.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=314
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/259 (52%), Positives = 167/259 (65%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGV+ES V+SG V HP KRARTT TYLAVAT G+E+ +
Sbjct 56 LLAGPANVIMQLANPGVGYGVMESRVESGRVDLHPIKRARTTFTYLAVATSGSEAQKDAF 115
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPVSYNAFDP LQLWV ACLY+ +D + G L+ AD Y
Sbjct 116 RRAVNRAHAQVYSTPESPVSYNAFDPNLQLWVGACLYKGGLDIYRMFIGELDGDDADRHY 175
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASV----AFLPW 176
++ L TTLQVP MWPPDR AFD YW+ SL + ID VRE+L +A+ +LP
Sbjct 176 REGMTLATTLQVPPAMWPPDRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVWLPG 235
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
P+R + F LF TTGFL FR M+L W +QRRF+ L++VL +R +P F
Sbjct 236 PVRRLTEGFALFITTGFLPQRFRDEMRLPWDSTKQRRFDRLIAVLATVNRYLPRFIRQFP 295
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L+D+ R R GR +V
Sbjct 296 FNVLLYDLDRRIRKGRPLV 314
>gi|183980565|ref|YP_001848856.1| hypothetical protein MMAR_0537 [Mycobacterium marinum M]
gi|183173891|gb|ACC39001.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=300
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/263 (51%), Positives = 171/263 (66%), Gaps = 12/263 (4%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIM+LA PGVG+GV+ES V+SG + +HP KRARTT TY+AVA+ GT+ +A
Sbjct 42 LLAGPANVIMELARPGVGHGVMESRVESGRIDRHPIKRARTTFTYVAVASAGTDEQKAAF 101
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ H QV ST SPVSY+AFD +LQLWVAACLY+ VD + G ++D AD Y
Sbjct 102 RRAVNRVHAQVYSTPESPVSYSAFDVELQLWVAACLYKGGVDIYRTFVGEMDDEEADRHY 161
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL--------RGVASVA 172
+D +GTTLQVP +WPPDR AFD YW+ SL + ID VRE+L RGVA
Sbjct 162 RDGMSMGTTLQVPAELWPPDRAAFDRYWQESLQKIHIDDAVREYLYPIAASRVRGVA--- 218
Query 173 FLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRA 232
LP PLR + L TTGFL FR M+L W A+QRRF+ L++V+ +R++P
Sbjct 219 -LPGPLRRWSEGLALLITTGFLPQRFRDEMRLPWDAAKQRRFDRLIAVVGALNRMMPRIV 277
Query 233 WIFVYQLYLWDMRFRARHGRRIV 255
F + L LWD+ R R GRR+V
Sbjct 278 REFPFNLMLWDLDRRIRTGRRLV 300
>gi|333989562|ref|YP_004522176.1| hypothetical protein JDM601_0922 [Mycobacterium sp. JDM601]
gi|333485530|gb|AEF34922.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=304
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/260 (52%), Positives = 163/260 (63%), Gaps = 5/260 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGVLES V+SG V HP KRARTT TYL VAT G++ +A
Sbjct 45 LLAGPANVIMQLARPGVGYGVLESRVESGRVDLHPIKRARTTFTYLVVATQGSDEQKAAF 104
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AHRQVRSTA SPV YNAFD LQLWV ACLY+ VD H G ++D AD Y
Sbjct 105 REAVNSAHRQVRSTADSPVKYNAFDRDLQLWVGACLYKGNVDVHRIFLGEMDDEHADRHY 164
Query 121 QD-AKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LP 175
+ K + T LQVPE MWP DR AFD YW+ LD + ID VR++L +A+ LP
Sbjct 165 HNEGKAMATMLQVPEDMWPADRAAFDRYWQEQLDKVHIDDTVRDYLLPIAASRLRGMTLP 224
Query 176 WPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIF 235
PL+ L TTGFL FR MQL W +QR+F+ L+ V+R + L+P F
Sbjct 225 GPLQRANERLALLITTGFLPQRFRDEMQLPWDADKQRQFDRLMGVIRGVNNLLPKFLRGF 284
Query 236 VYQLYLWDMRFRARHGRRIV 255
+ + LWD+ R R GR +V
Sbjct 285 PFNVLLWDVDRRIRTGRPLV 304
>gi|254777322|ref|ZP_05218838.1| hypothetical protein MaviaA2_21996 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=314
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/259 (52%), Positives = 167/259 (65%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGV+ES V+SG V HP KRARTT TYLAVAT G+E+ +
Sbjct 56 LLAGPANVIMQLANPGVGYGVMESRVESGRVDLHPIKRARTTFTYLAVATSGSEAQKDAF 115
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPVSYNAFDP LQLWV ACLY+ +D + G L+ AD Y
Sbjct 116 RRAVNRAHAQVYSTPESPVSYNAFDPNLQLWVGACLYKGGLDIYRMFIGELDGDDADRHY 175
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASV----AFLPW 176
++ L TTLQVP MWPPDR AFD YW+ SL + ID VRE+L +A+ +LP
Sbjct 176 REGMTLATTLQVPPAMWPPDRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVWLPG 235
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
P+R + F LF TTGFL FR M+L W +QRRF+ L++VL +R +P F
Sbjct 236 PVRRLTEGFALFITTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFIRQFP 295
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L+D+ R R GR +V
Sbjct 296 FNVLLYDLDRRIRKGRPLV 314
>gi|333991542|ref|YP_004524156.1| hypothetical protein JDM601_2902 [Mycobacterium sp. JDM601]
gi|333487510|gb|AEF36902.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=305
Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/251 (49%), Positives = 165/251 (66%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANV+MQL++PGVGYGV+ES V+SG + +HP+KR RTT Y+AVA +GT+++RA R AV
Sbjct 55 AANVVMQLSMPGVGYGVVESRVESGALMEHPWKRLRTTAQYMAVALLGTDAERAAYRDAV 114
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
+VAHRQVRST SSPV YNAFD LQLWVAACL+ ++ D + L G + A+ YQ A+
Sbjct 115 NVAHRQVRSTGSSPVKYNAFDRDLQLWVAACLFVFYEDTFQLLRGKMTPEEAENFYQQAR 174
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
LGTTLQV E WP R FD YW + L +D VRE L + ++ + LRA+ GP
Sbjct 175 PLGTTLQVTEDQWPATRADFDAYWNATCQTLVLDDTVREFLMRLINLKMINPVLRALFGP 234
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F T GFLAP FR ++ +EWS +QR+FE L + +R +P F Y + + D+
Sbjct 235 LLRFLTVGFLAPRFRELLGVEWSATEQRQFENLFLFVSFVNRFLPRFIRTFNYTVLMSDV 294
Query 245 RFRARHGRRIV 255
R+R R + ++
Sbjct 295 RYRIRRRKALI 305
>gi|118616915|ref|YP_905247.1| hypothetical protein MUL_1201 [Mycobacterium ulcerans Agy99]
gi|118569025|gb|ABL03776.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=300
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/263 (51%), Positives = 170/263 (65%), Gaps = 12/263 (4%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIM+LA PGVG+GV+ES V+SG + +HP KRARTT TY+AVA+ GT+ +A
Sbjct 42 LLAGPANVIMELARPGVGHGVMESRVESGRIDRHPIKRARTTFTYVAVASAGTDEQKAAF 101
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ H QV ST SPVSY+AFD +LQLWVAACLY+ VD + G ++D AD Y
Sbjct 102 RRAVNRVHAQVYSTPESPVSYSAFDVELQLWVAACLYKGGVDIYRTFVGEMDDEEADRHY 161
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL--------RGVASVA 172
+D +GTTLQVP +WPPDR AFD YW+ SL + ID VRE+L RGVA
Sbjct 162 RDGMSMGTTLQVPAELWPPDRAAFDRYWQESLQKIHIDDAVREYLYPIAASRVRGVA--- 218
Query 173 FLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRA 232
LP PLR + L TTGFL FR M+L W A+QRRF+ L++++ +R++P
Sbjct 219 -LPGPLRRWSEGLALLITTGFLPQRFRDEMRLPWDAAKQRRFDRLIAMVGALNRMMPRIV 277
Query 233 WIFVYQLYLWDMRFRARHGRRIV 255
F + LWD+ R R GRR+V
Sbjct 278 REFPFNFMLWDLDRRIRTGRRLV 300
>gi|120401435|ref|YP_951264.1| hypothetical protein Mvan_0410 [Mycobacterium vanbaalenii PYR-1]
gi|119954253|gb|ABM11258.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=302
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/254 (52%), Positives = 159/254 (63%), Gaps = 4/254 (1%)
Query 6 ANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVD 65
ANVIMQLA PGVGYGVLES V+SG + +HP KRARTT TYLAV+T GT +A R AV+
Sbjct 49 ANVIMQLARPGVGYGVLESRVESGRIDRHPVKRARTTFTYLAVSTNGTPEQQAAFRRAVN 108
Query 66 VAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKR 125
AH QV ST SPV Y+AFD LQLWV ACLY+ VD H G +++ TAD +Y +
Sbjct 109 RAHAQVFSTDESPVKYHAFDKDLQLWVGACLYKGVVDVHRLFVGEMDEETADRLYLQGRA 168
Query 126 LGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPWPLRAV 181
L T LQVPE MWP DR AFD YW+ SLD + ID VRE L +A+ LP PL+
Sbjct 169 LATMLQVPEDMWPADRAAFDRYWQESLDDVHIDDTVREFLYPIAATRLRGLALPGPLQRQ 228
Query 182 AGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYL 241
L TTGFL FR MQL W QQRRF+ L++ LR + + P F + + L
Sbjct 229 TEKLALLITTGFLPQRFREEMQLPWDAGQQRRFDRLMAALRAVNSVSPKFVRQFPFNVLL 288
Query 242 WDMRFRARHGRRIV 255
D+ +R R GR +V
Sbjct 289 KDLDWRVRTGRPLV 302
>gi|226364850|ref|YP_002782632.1| hypothetical protein ROP_54400 [Rhodococcus opacus B4]
gi|226243339|dbj|BAH53687.1| hypothetical protein [Rhodococcus opacus B4]
Length=274
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/229 (52%), Positives = 151/229 (66%), Gaps = 0/229 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L AANVIMQL+ P VGYGV+ES V+SG +++HP KR RTT TYL VA GTE ++A
Sbjct 20 LLAGAANVIMQLSHPAVGYGVVESRVESGQIFRHPIKRTRTTLTYLVVAARGTEEEKAQF 79
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R V+ AH QV+S SPV YNAFDP+LQLWVAAC+Y F D H ++G L ++ Y
Sbjct 80 RKGVNRAHAQVKSGPDSPVQYNAFDPELQLWVAACIYHGFEDVHRSMHGELTATESEYFY 139
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
Q GTTLQVP+ +WP +R AFDEYW++SL + ID +RE+L +A V F+P +
Sbjct 140 QQGATFGTTLQVPKELWPENRAAFDEYWEKSLANVSIDDTIREYLLSLAKVEFMPAVVSR 199
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIP 229
+ G NLF TTGFL P FR M L W+ QRRF+ +S + R IP
Sbjct 200 LFGRLNLFFTTGFLPPLFRDQMHLTWTAKDQRRFDRTMSTIGAVSRRIP 248
>gi|108797348|ref|YP_637545.1| hypothetical protein Mmcs_0368 [Mycobacterium sp. MCS]
gi|119866433|ref|YP_936385.1| hypothetical protein Mkms_0378 [Mycobacterium sp. KMS]
gi|126432970|ref|YP_001068661.1| hypothetical protein Mjls_0357 [Mycobacterium sp. JLS]
gi|108767767|gb|ABG06489.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692522|gb|ABL89595.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232770|gb|ABN96170.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=303
Score = 241 bits (614), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/259 (51%), Positives = 166/259 (65%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGVLES V+SG V HP KRARTT TYLAVAT G+++ +A
Sbjct 45 LLAGPANVIMQLARPGVGYGVLESRVESGRVDLHPVKRARTTFTYLAVATRGSDAQKAAF 104
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPV Y+AFD LQLWVAACLY+ VD + G ++D A+ Y
Sbjct 105 RRAVNKAHAQVYSTDESPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAAEEHY 164
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
+D+ +GTTLQVP MWP DR AFD+YW+ SLD + ID VRE+L +A+ LP
Sbjct 165 RDSMTMGTTLQVPPEMWPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPG 224
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
PL+ L TTGFL FR M+L W +QRRF+ L+ VLR + L+P F
Sbjct 225 PLQRRNEELALLITTGFLPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFP 284
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L D+ R R GR ++
Sbjct 285 FNVLLKDLDRRIRTGRPLI 303
>gi|254821575|ref|ZP_05226576.1| hypothetical protein MintA_16697 [Mycobacterium intracellulare
ATCC 13950]
Length=296
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/259 (51%), Positives = 166/259 (65%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGV+ES V+SG V HPFKRARTT TYLAVAT G+E+ +A
Sbjct 38 LLAGPANVIMQLAQPGVGYGVMESRVESGRVDLHPFKRARTTFTYLAVATNGSEAQKAAF 97
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPVSYNAFDP LQLWV ACLY+ +D + G L+ A+ Y
Sbjct 98 RRAVNKAHAQVYSTPESPVSYNAFDPALQLWVGACLYKGGLDIYRMFIGELDGEDAERHY 157
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
++ L TTLQVP MWP DR AFD YW+ SL + ID VRE+L +A+ LP
Sbjct 158 REGMALATTLQVPPKMWPADRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVKLPG 217
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
P++ ++ F L TTGFL FR M+L W +QRRF+ L++VL +R +P F
Sbjct 218 PIQRLSEGFALMITTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFIRQFP 277
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L D+ R + GR +V
Sbjct 278 FNVLLHDLDRRIKKGRPLV 296
>gi|41409822|ref|NP_962658.1| hypothetical protein MAP3724 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398654|gb|AAS06274.1| hypothetical protein MAP_3724 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460166|gb|EGO39071.1| hypothetical protein MAPs_43460 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=302
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/259 (51%), Positives = 166/259 (65%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGV+ES V+SG V HPFKRARTT TYLAVAT G+++ +A
Sbjct 44 LLAGPANVIMQLAQPGVGYGVMESRVESGRVDLHPFKRARTTFTYLAVATNGSDAQKAAF 103
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPVSYNAFDP LQLWV ACLY+ +D + G L+ A+ Y
Sbjct 104 RRAVNKAHAQVYSTPESPVSYNAFDPALQLWVGACLYKGGLDIYRMFIGELDGEDAERHY 163
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
++ L TTLQVP MWP DR AFD YW+ SL + ID VRE+L +A+ LP
Sbjct 164 REGMALATTLQVPPKMWPADRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVKLPG 223
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
P++ ++ F L TTGFL FR M+L W +QRRF+ L++VL +R +P F
Sbjct 224 PIQRLSEGFALMITTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFIRQFP 283
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L D+ R + GR +V
Sbjct 284 FNVLLHDLDRRIKKGRPLV 302
>gi|254427056|ref|ZP_05040763.1| hypothetical protein ADG881_286 [Alcanivorax sp. DG881]
gi|196193225|gb|EDX88184.1| hypothetical protein ADG881_286 [Alcanivorax sp. DG881]
Length=294
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/255 (51%), Positives = 160/255 (63%), Gaps = 0/255 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
ML AN+IMQLA+P VGYGV ES V SG+V PFKR RTT TYLAVA +GT ++
Sbjct 40 MLSAGANIIMQLALPAVGYGVAESRVKSGSVLHRPFKRTRTTFTYLAVAMMGTNEEKLAY 99
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AHRQV ST SSPV YNAFDP+LQ+WVAACLY FVD ++ + PL A +A Y
Sbjct 100 RKAVNGAHRQVYSTDSSPVEYNAFDPELQMWVAACLYWGFVDTYQKVNRPLSHAEQEAFY 159
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
+ + LGTTLQV + MWP D F+ YW+ L L ID VRE L +A + FL +
Sbjct 160 RLSHPLGTTLQVRQDMWPKDLDGFEAYWQNGLKHLSIDERVREFLMIIADLKFLSPVSQF 219
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY 240
+ G FN F TTGFL E R MQLEW+ +QR+FE + + RL P Y L
Sbjct 220 LFGRFNRFITTGFLPQELRDQMQLEWNDDKQRKFERFVRMAGRISRLFPRPIRQAAYLLP 279
Query 241 LWDMRFRARHGRRIV 255
LWD R R + G+ ++
Sbjct 280 LWDFRRRLKKGKPLI 294
>gi|145220934|ref|YP_001131612.1| hypothetical protein Mflv_0330 [Mycobacterium gilvum PYR-GCK]
gi|315442096|ref|YP_004074975.1| hypothetical protein Mspyr1_04280 [Mycobacterium sp. Spyr1]
gi|145213420|gb|ABP42824.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260399|gb|ADT97140.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=301
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/254 (52%), Positives = 157/254 (62%), Gaps = 4/254 (1%)
Query 6 ANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVD 65
ANVIMQLA P VGYGVLES V+SG V +HP KRARTT TYLAV+T GT + R AV+
Sbjct 48 ANVIMQLARPAVGYGVLESRVESGRVDRHPIKRARTTFTYLAVSTNGTPEQQKAFRRAVN 107
Query 66 VAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKR 125
AH QV ST SPV Y+AFD LQLWV ACLY+ VD H G +++ TAD VY +
Sbjct 108 GAHAQVFSTDESPVKYHAFDKDLQLWVGACLYKGVVDVHRLFVGEMDEETADRVYVQGRA 167
Query 126 LGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPWPLRAV 181
L T LQVPE MWP DR AFD YW SLD + ID VRE+L +A+ LP PL+
Sbjct 168 LATMLQVPESMWPADREAFDRYWAASLDEVHIDDTVREYLYPIAASRLRGLRLPGPLQRR 227
Query 182 AGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYL 241
L TTGFL FR M+L W QRRF+ L+ VLR+A+ + P F + L L
Sbjct 228 NEELALLITTGFLPQRFRDEMRLPWGPDHQRRFDRLMKVLRVANTVSPKFVRQFPFNLLL 287
Query 242 WDMRFRARHGRRIV 255
D+ R R GR +V
Sbjct 288 KDVDRRIRTGRPLV 301
>gi|118467455|ref|YP_885024.1| hypothetical protein MSMEG_0613 [Mycobacterium smegmatis str.
MC2 155]
gi|118168742|gb|ABK69638.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=301
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/259 (51%), Positives = 162/259 (63%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVGYGV+ES VDSG HP KRARTT TYLAVAT GTE+ +A
Sbjct 43 LLAGPANVIMQLANPGVGYGVVESRVDSGRTDLHPVKRARTTFTYLAVATRGTEAQKAAF 102
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPV YNAFD LQLWVAACLY+ VD G ++D TAD Y
Sbjct 103 RRAVNKAHAQVYSTEDSPVQYNAFDKNLQLWVAACLYKGGVDVLRMFVGEMDDETADRHY 162
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVAS----VAFLPW 176
+D+ +GTTLQVP MWP DR AFD YW ++ + ID VR +L +A+ LP
Sbjct 163 RDSVTMGTTLQVPAEMWPADRAAFDRYWNEQIEKVHIDDTVRAYLYPIAAGRPKATKLPR 222
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
++ L TTGFL FR M+L W + +Q+RF+ L++VLR + L+P F
Sbjct 223 FIQKRLDGIALLITTGFLPQRFRDEMRLPWDEKRQQRFDRLIAVLRFVNDLLPAPVRAFP 282
Query 237 YQLYLWDMRFRARHGRRIV 255
+ L D+ +R R GR +V
Sbjct 283 FNALLKDLDWRIRTGRSLV 301
>gi|296167570|ref|ZP_06849907.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897136|gb|EFG76746.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=300
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/259 (51%), Positives = 161/259 (63%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANV+MQLA PGVGYGVLES V+SG V HP KRARTT TYLAVAT+G+++ +
Sbjct 42 LLAGPANVVMQLARPGVGYGVLESRVESGRVDLHPIKRARTTFTYLAVATMGSDAQKDAF 101
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPV YNAFDP LQLWV ACLY+ VD + G L+ AD Y
Sbjct 102 RRAVNRAHAQVYSTPESPVQYNAFDPDLQLWVGACLYKGGVDIYRMFIGELDGEDADRHY 161
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
++ L TTLQVP MWP DR AFD YW+ SL + ID VRE+L +A+ LP
Sbjct 162 REGMALATTLQVPPEMWPADRAAFDRYWQESLAQVHIDEAVREYLYPIAANRIRGLTLPG 221
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
PL+ + L TTGFL FR M+L W +QRRF+ L+ L L +R +P F
Sbjct 222 PLQRASESLALLITTGFLPQRFRDEMRLPWDATRQRRFDRLIGALALVNRCLPRFVRRFP 281
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L D+ R R GR +V
Sbjct 282 FNVLLADVDRRIRTGRPLV 300
>gi|54027031|ref|YP_121273.1| hypothetical protein nfa50570 [Nocardia farcinica IFM 10152]
gi|54018539|dbj|BAD59909.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=302
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/251 (49%), Positives = 154/251 (62%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANV MQ++ PGVGYGV ES VDSG + KHP+KRARTT TYLAVA +GT+ +R R AV
Sbjct 52 AANVAMQMSHPGVGYGVAESKVDSGALMKHPWKRARTTTTYLAVAILGTDEERRAYREAV 111
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
D HR VRS + V YNAFD LQLWVAACLY F D ++ L G + D A+A Y +
Sbjct 112 DAVHRHVRSEPGAKVKYNAFDRHLQLWVAACLYIGFEDTYQLLSGKMSDEQAEAFYASSS 171
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
LGTTLQV E MWP R FD YW ++ + +D VR ++ + ++ + W LR
Sbjct 172 TLGTTLQVTEDMWPATRAEFDAYWNKACEQAVLDDHVRAYIDDLLNLRMIHWSLRLPFRN 231
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F TTGFLAP FR M+LEW+ A QRRFE L + +R IP L + D+
Sbjct 232 LLKFLTTGFLAPYFREQMRLEWTAADQRRFEHLFLFVGFVNRFIPRFVRHGGSHLLMADL 291
Query 245 RFRARHGRRIV 255
+ R R G+ +V
Sbjct 292 KRRKRRGKNLV 302
>gi|257056043|ref|YP_003133875.1| hypothetical protein Svir_20310 [Saccharomonospora viridis DSM
43017]
gi|256585915|gb|ACU97048.1| uncharacterized conserved protein [Saccharomonospora viridis
DSM 43017]
Length=284
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/221 (53%), Positives = 148/221 (67%), Gaps = 0/221 (0%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA+P VGYGV+ES V GN++ P KR RTT TYLAVA +GT+ +R
Sbjct 30 LLAGGANVIMQLALPAVGYGVVESRVHDGNIFTRPLKRTRTTLTYLAVAMLGTDEERKAF 89
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ H +VRST +SPV Y+A DP+LQLWVAACLYR D H G + TA+ +Y
Sbjct 90 RRAVNRQHARVRSTDTSPVRYHAMDPELQLWVAACLYRGVEDVHRVFVGEPDADTAERIY 149
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
+ RLGTTLQV MWP DR F+ YW+ SL + ID VRE+L G+A++ P+P+R
Sbjct 150 AYSARLGTTLQVRPEMWPADRAEFERYWQESLKRVSIDDTVREYLHGIATLRMFPYPVRL 209
Query 181 VAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVL 221
+ G N F TTGFL P FR M+L WS QRRF+ +++L
Sbjct 210 LFGRLNRFITTGFLPPLFREHMRLPWSDRHQRRFDRTMAIL 250
>gi|342859247|ref|ZP_08715901.1| hypothetical protein MCOL_10223 [Mycobacterium colombiense CECT
3035]
gi|342133488|gb|EGT86691.1| hypothetical protein MCOL_10223 [Mycobacterium colombiense CECT
3035]
Length=302
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/259 (50%), Positives = 164/259 (64%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQL+ PGVGYGV+ES V+SG V HP KRARTT TYLAVAT G+++ +
Sbjct 44 LLAGPANVIMQLSHPGVGYGVMESRVESGRVDLHPIKRARTTFTYLAVATNGSDAQKDAF 103
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST SPVSYNAFDP+LQLWV ACLY+ +D + G L+ AD Y
Sbjct 104 RRAVNRAHAQVYSTPESPVSYNAFDPELQLWVGACLYKGGLDIYRMFIGELDGEDADRHY 163
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
++ L TTLQVP MWP DR AFD YW+ SL + ID VRE+L +A+ LP
Sbjct 164 REGMTLATTLQVPTQMWPADRAAFDRYWEESLAKVHIDDAVREYLFPIAANRIRGVRLPR 223
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
L+ ++ F L TTGFL FR M+L W +QRRF+ L++VL +R +P F
Sbjct 224 ALQRLSDNFALLITTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFVRQFP 283
Query 237 YQLYLWDMRFRARHGRRIV 255
+ + L D+ R + GR +V
Sbjct 284 FNVLLHDLDRRIKKGRPLV 302
>gi|54026718|ref|YP_120960.1| hypothetical protein nfa47440 [Nocardia farcinica IFM 10152]
gi|54018226|dbj|BAD59596.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=298
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/238 (50%), Positives = 148/238 (63%), Gaps = 0/238 (0%)
Query 7 NVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVDV 66
NVIMQL++P VGYGVLES VDSG + HP KR RTT TYLAVA +G++ +RA R AVD
Sbjct 50 NVIMQLSLPPVGYGVLESTVDSGKIMLHPIKRTRTTLTYLAVAMLGSDDERAAYRAAVDT 109
Query 67 AHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRL 126
AHR VRS SPV YNAFD +LQLWVAACLY D +E ++GP++ TAD Y+ A+RL
Sbjct 110 AHRAVRSGPDSPVRYNAFDRELQLWVAACLYWGARDLYERMHGPMDPGTADGFYRAAERL 169
Query 127 GTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFN 186
GTTLQ+ WPPDR AFD YW+ L +ID PVRE+ + ++ P P+R PF+
Sbjct 170 GTTLQMHPAQWPPDRAAFDTYWREHLATTRIDPPVREYFWDLVNLKMFPRPVRLAVAPFH 229
Query 187 LFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
+ G L R M + WS RR LL+ + + +P F +LWDM
Sbjct 230 RWMVAGLLPERLREQMGMRWSPRDDRRLARLLTTVGAVEDRLPRPVKTFPVNAFLWDM 287
>gi|118473088|ref|YP_887893.1| hypothetical protein MSMEG_3590 [Mycobacterium smegmatis str.
MC2 155]
gi|118174375|gb|ABK75271.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=291
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/252 (52%), Positives = 161/252 (64%), Gaps = 10/252 (3%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANVIMQLA PGVG+GV+ESPVDSGN+ KHP+KRARTT +YLAVA +G + DRA R AV
Sbjct 41 AANVIMQLARPGVGHGVVESPVDSGNLLKHPWKRARTTFSYLAVAILGNDEDRAAFRTAV 100
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
D AHRQVRS SPV YNAFD LQ+WVAACL+ D ++ L G + A+ Y A
Sbjct 101 DGAHRQVRSGPQSPVRYNAFDRDLQMWVAACLFVGLEDTYQLLRGAMTPEQAEQFYASAA 160
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVA-G 183
LGTTLQV WP R FD+YW + + +D V +LR + + + PL A+
Sbjct 161 TLGTTLQVSPDQWPATRAGFDDYWNAACGQVAVDDVVATYLRDLVHLKMIN-PLLALPFR 219
Query 184 PFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQ----L 239
P F TTGFLAP FR ++ L+W + +QR FEWL ++ L +R +P IFV Q L
Sbjct 220 PLLAFLTTGFLAPVFREVLGLKWGRGRQRLFEWLFLLVALGNRFLP----IFVRQGTSYL 275
Query 240 YLWDMRFRARHG 251
L D+R RAR G
Sbjct 276 LLADVRRRARAG 287
>gi|169631406|ref|YP_001705055.1| hypothetical protein MAB_4329c [Mycobacterium abscessus ATCC
19977]
gi|169243373|emb|CAM64401.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=312
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/251 (50%), Positives = 158/251 (63%), Gaps = 1/251 (0%)
Query 6 ANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVD 65
AN+IMQLA PGVGYGV++S V+SG HP KRARTT T+LAVAT+GT +A R A +
Sbjct 62 ANIIMQLARPGVGYGVVDSKVESGRADLHPIKRARTTFTFLAVATLGTPEQKAAFRKATN 121
Query 66 VAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKR 125
AH QV S V YNAFDP+LQ WVA CLY+ FVD +E GPL TA+ Q+
Sbjct 122 RAHAQVHSQPGDKVQYNAFDPELQKWVAVCLYKGFVDVYEAFVGPLTGETAERCLQEGAV 181
Query 126 LGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF-LPWPLRAVAGP 184
+GTTLQ+P MWP FDEYW +S+D + ID VR +L +AS + +P +R G
Sbjct 182 MGTTLQMPLAMWPKSCAEFDEYWAQSMDLVHIDDHVRPYLYRIASASIAVPPFMRGPVGA 241
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F+ F TTGFL FR M W +++R F WLL+VL LA RL+P+ F + + D+
Sbjct 242 FSRFITTGFLPQRFRDEMGFAWDPSRERMFRWLLAVLGLAARLLPNGLRRFPFNALMLDL 301
Query 245 RFRARHGRRIV 255
+R R GR +V
Sbjct 302 DWRIRTGRPLV 312
>gi|240168496|ref|ZP_04747155.1| hypothetical protein MkanA1_04237 [Mycobacterium kansasii ATCC
12478]
Length=302
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/259 (48%), Positives = 162/259 (63%), Gaps = 4/259 (1%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L ANVIMQLA PGVG GV+ES V+SG + HP KR RTT TY+AVA G++ +A
Sbjct 44 LLAGPANVIMQLARPGVGCGVVESRVESGRLDLHPIKRTRTTFTYIAVAMAGSDEQKAAY 103
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R AV+ AH QV ST+ SPV YNAFDP+LQLWVAAC+ + D H G L+D A+ Y
Sbjct 104 RRAVNRAHAQVYSTSESPVQYNAFDPELQLWVAACMCKGAADVHRIFVGELDDVEAERHY 163
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAF----LPW 176
++ L TTLQVP MWPPDR AFD YW+ SL+ ++ID VR++L +A+ +P
Sbjct 164 RETMALATTLQVPAEMWPPDRAAFDRYWQDSLEKVRIDGAVRDYLYPIAAARIPGVPVPG 223
Query 177 PLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFV 236
LR V L TTGFL FR M+L W +QR F+ L++V+ + ++P F
Sbjct 224 VLRKVPESIALLITTGFLPQRFRDEMRLPWDAGRQRCFDRLMAVIGALNGMMPRAVRQFP 283
Query 237 YQLYLWDMRFRARHGRRIV 255
+ L LWD+ R + GR +V
Sbjct 284 FNLMLWDLDRRIKAGRPLV 302
>gi|254823232|ref|ZP_05228233.1| hypothetical protein MintA_25104 [Mycobacterium intracellulare
ATCC 13950]
Length=296
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/251 (50%), Positives = 154/251 (62%), Gaps = 1/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANV+MQLA GV YGV+ES VDSGN+YKHPFKRARTT TY+AVA G DR + R AV
Sbjct 47 AANVVMQLANSGVAYGVMESKVDSGNLYKHPFKRARTTFTYIAVAIAGNARDRRVYREAV 106
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
+ AH QVRS SPV YNAFDP+LQLWVA+C+ F D G D +++ A
Sbjct 107 NAAHAQVRSGPQSPVRYNAFDPQLQLWVASCMAAVFEDTRRLRGG-RSRRDPDTIHRAAS 165
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
TTLQVP MWP DR A D YW+ LD L D +R +L G+A + FLP P+ A+ G
Sbjct 166 VFATTLQVPPEMWPADREAADRYWQEQLDRLDFDDRMRSYLIGIARLDFLPAPVSALFGG 225
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
+NLF T G+L P+ R + W+ AQQRRF+ +L + D P Q +WDM
Sbjct 226 WNLFMTLGYLPPQLREKLGFGWTAAQQRRFDRWQRLLGVLDLFTPRFLTRLGVQAVVWDM 285
Query 245 RFRARHGRRIV 255
R R R G +V
Sbjct 286 RLRHRIGATVV 296
>gi|325673329|ref|ZP_08153021.1| hypothetical protein HMPREF0724_10803 [Rhodococcus equi ATCC
33707]
gi|325555919|gb|EGD25589.1| hypothetical protein HMPREF0724_10803 [Rhodococcus equi ATCC
33707]
Length=300
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/251 (47%), Positives = 163/251 (65%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANV+MQL+ P VG+GV ES V+SG++ KHP+KRARTT TYL+VA +G++ +R R AV
Sbjct 50 AANVVMQLSWPEVGHGVAESKVESGSLAKHPWKRARTTFTYLSVAILGSDDERRAYREAV 109
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
+ AHR VRS +SPVSYNAFD +LQLWVAACL+ F D H+ L+G + A+ Y+ +
Sbjct 110 NGAHRYVRSDENSPVSYNAFDRELQLWVAACLFIGFEDTHQLLHGRMTPGQAEEFYRSSS 169
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
LGTTLQV E MWP R FD YW + + + ID VR++L + ++ + PLR V G
Sbjct 170 TLGTTLQVTEDMWPATRADFDRYWNIACERVAIDETVRDYLNDLLALRMVRPPLRLVFGD 229
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F TTGFL P FR + +EW++ +RRFE L + +R +P ++ + D+
Sbjct 230 LLRFLTTGFLPPLFREQLGMEWNEDDRRRFEHLFVFVSFVNRFVPRFVRHLPSRVLMRDL 289
Query 245 RFRARHGRRIV 255
+ R R G+R+V
Sbjct 290 QRRIRSGKRLV 300
>gi|312137904|ref|YP_004005240.1| hypothetical protein REQ_04160 [Rhodococcus equi 103S]
gi|311887243|emb|CBH46552.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=300
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/251 (47%), Positives = 163/251 (65%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANV+MQL+ P VG+GV ES V+SG++ KHP+KRARTT TYL+VA +G++ +R R AV
Sbjct 50 AANVVMQLSWPEVGHGVAESKVESGSLAKHPWKRARTTFTYLSVAILGSDDERRAYREAV 109
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
+ AHR VRS +SPVSYNAF+ +LQLWVAACL+ F D H+ L+G + A+ Y+ +
Sbjct 110 NGAHRYVRSDENSPVSYNAFNRELQLWVAACLFIGFEDTHQLLHGRMTPEQAEEFYRSSS 169
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
LGTTLQV E MWP R FD YW + + + ID VR++L + ++ + PLR V G
Sbjct 170 TLGTTLQVTEDMWPATRADFDRYWNIACERVAIDETVRDYLNDLIALRMVRPPLRLVFGD 229
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F TTGFL P FR + +EW++ +RRFE L + +R +P ++ + D+
Sbjct 230 LLRFLTTGFLPPLFREQLGMEWNEDDRRRFEHLFVFVSFVNRFVPRFVRHLPSRVLMRDL 289
Query 245 RFRARHGRRIV 255
+ R R G+R+V
Sbjct 290 QRRIRSGKRLV 300
>gi|300790162|ref|YP_003770453.1| hypothetical protein AMED_8355 [Amycolatopsis mediterranei U32]
gi|299799676|gb|ADJ50051.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340531843|gb|AEK47048.1| hypothetical protein RAM_42905 [Amycolatopsis mediterranei S699]
Length=267
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/255 (52%), Positives = 163/255 (64%), Gaps = 10/255 (3%)
Query 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
+L +ANVIMQL+ VG+GVLES VDSGN+++HP KR RTT TYLAVAT+GT+++RA
Sbjct 15 LLAGSANVIMQLSRAPVGHGVLESRVDSGNLFRHPVKRTRTTLTYLAVATMGTDAERAAF 74
Query 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
R V+ AH QV STASSPV+Y+AFD LQLWVAACLY+ D G + Y
Sbjct 75 RKGVNRAHAQVHSTASSPVAYDAFDTDLQLWVAACLYKGIEDVLLAFGG----GEPERFY 130
Query 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRA 180
A LGTTLQVP WP DR AF+EYW L + ID VR +L + + FLP P+
Sbjct 131 AGAAALGTTLQVPPERWPGDRAAFEEYWAGELAEVCIDDAVRRYLTRIVDLEFLP-PV-- 187
Query 181 VAGP---FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVY 237
VAGP F+ F TTGFL FR M+L W+ A QRRFE LL+ L L R++P F +
Sbjct 188 VAGPGRRFHRFVTTGFLPQRFRDEMRLPWTAADQRRFEALLAALGLVVRVLPGPLRRFPF 247
Query 238 QLYLWDMRFRARHGR 252
L D+R+R R GR
Sbjct 248 NACLADLRWRLRTGR 262
>gi|326383584|ref|ZP_08205270.1| hypothetical protein SCNU_11635 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197668|gb|EGD54856.1| hypothetical protein SCNU_11635 [Gordonia neofelifaecis NRRL
B-59395]
Length=287
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/250 (48%), Positives = 157/250 (63%), Gaps = 2/250 (0%)
Query 6 ANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAVD 65
ANVIMQLAVP VGYGV ES V+SGN++K P KR RTT +YLAVA +G+ DR R AV+
Sbjct 40 ANVIMQLAVPAVGYGVYESKVESGNLFKVPAKRTRTTLSYLAVAAMGSAEDRRRYRQAVN 99
Query 66 VAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKR 125
AH QVRS SPV YNAFDPKLQLWVAACLYR + D F P A + Y+
Sbjct 100 RAHVQVRSGDDSPVKYNAFDPKLQLWVAACLYRGWEDTQRFFGDP--SAITEEAYRQGAV 157
Query 126 LGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPF 185
+GTTLQ+P MWP R F+ YW ++D L+ID +R++L + + FLP P+ G +
Sbjct 158 MGTTLQMPPEMWPATRADFEVYWNETVDDLEIDDTIRDYLMKIVRMDFLPRPVSLTMGWW 217
Query 186 NLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDMR 245
+ T GFL PEFR M + ++ Q+ F ++ R R++P + +F + L L D+R
Sbjct 218 SEAMTLGFLPPEFRDKMGVTMTRRQEFLFNTHNAIARRVLRVLPRQLRVFPFNLLLADVR 277
Query 246 FRARHGRRIV 255
+R R GR +V
Sbjct 278 WRMRTGRPLV 287
>gi|315442001|ref|YP_004074880.1| hypothetical protein Mspyr1_03310 [Mycobacterium sp. Spyr1]
gi|315260304|gb|ADT97045.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=285
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/251 (49%), Positives = 150/251 (60%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANVIMQL+ PGVGYGV+ES VDSGN+ KHP+KRARTT YLAVA G++ DRA R AV
Sbjct 35 AANVIMQLSRPGVGYGVVESKVDSGNLMKHPWKRARTTFQYLAVAIFGSDDDRAAFRAAV 94
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
D AHR V+ST SSPV YNAFD LQ+WVAACL+ D ++ L G + AD Y A
Sbjct 95 DEAHRHVKSTPSSPVRYNAFDRDLQMWVAACLFVGLEDTYQLLRGEMTAEQADQFYASAW 154
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
LGTTLQV E WPP R FD YW + + +D VR +L + ++ + L P
Sbjct 155 TLGTTLQVTEDQWPPTRADFDRYWDEACGQVAMDDVVRSYLLDLVNLRMINPVLGIPFRP 214
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F T GFLAP FR + L W +QR FE L + +R IP + L D+
Sbjct 215 LLKFLTAGFLAPVFRDALGLTWGDGRQRLFERLFLSVAFVNRFIPGFLRQGGSHVLLADV 274
Query 245 RFRARHGRRIV 255
R R R R++V
Sbjct 275 RMRVRRHRQLV 285
>gi|145221027|ref|YP_001131705.1| hypothetical protein Mflv_0423 [Mycobacterium gilvum PYR-GCK]
gi|145213513|gb|ABP42917.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=285
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/251 (49%), Positives = 149/251 (60%), Gaps = 0/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANVIMQL+ PGVGYGV+ES VDSGN+ KHP+KRARTT YLAVA G++ DRA R AV
Sbjct 35 AANVIMQLSRPGVGYGVVESKVDSGNLMKHPWKRARTTFQYLAVAIFGSDDDRAAFRAAV 94
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
D AHR V+ST SSPV YNAFD LQ+WVAACL+ D ++ L G + AD Y A
Sbjct 95 DEAHRHVKSTPSSPVRYNAFDRDLQMWVAACLFVGLEDTYQLLRGEMTAEQADHFYASAW 154
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
LGTTLQV E WPP R FD YW + + +D VR +L + + + L P
Sbjct 155 TLGTTLQVTEDQWPPTRADFDRYWDEACGQVAMDDVVRSYLLDLVDLRMINPVLGIPFRP 214
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
F T GFLAP FR + L W +QR FE L + +R IP + L D+
Sbjct 215 LLKFLTAGFLAPVFRDALGLTWGDGRQRLFERLFLCVAFVNRFIPGFLRQGGSHVLLADV 274
Query 245 RFRARHGRRIV 255
R R R R++V
Sbjct 275 RMRVRRHRQLV 285
>gi|342861262|ref|ZP_08717910.1| hypothetical protein MCOL_20361 [Mycobacterium colombiense CECT
3035]
gi|342131162|gb|EGT84443.1| hypothetical protein MCOL_20361 [Mycobacterium colombiense CECT
3035]
Length=274
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/251 (49%), Positives = 150/251 (60%), Gaps = 1/251 (0%)
Query 5 AANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV 64
AANV+MQLA GV YGV+ES VDSGN++KHPFKRARTT TY+AVA G DR + R AV
Sbjct 25 AANVVMQLANAGVAYGVMESKVDSGNLHKHPFKRARTTFTYIAVAIGGKAKDRRVYREAV 84
Query 65 DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAK 124
+ AH VRS SPV YNAFDP LQLWVA+C+ F D L G + +++ A
Sbjct 85 NAAHVPVRSGPHSPVRYNAFDPALQLWVASCMAAVFEDTRR-LRGGRSRHDPETIHRAAS 143
Query 125 RLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGP 184
TTLQVP MWP DR A YW+ LD L D +R +L G+A + FLP P+ A+ G
Sbjct 144 VFATTLQVPPDMWPADRAAAQRYWREQLDRLDFDERMRAYLIGIARLNFLPAPIPALLGS 203
Query 185 FNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLYLWDM 244
+NLF T G+L R + WS+AQQRRF+ VL + D P + +WDM
Sbjct 204 WNLFMTLGYLPARLREKLGFGWSEAQQRRFDRWQRVLGVLDLFTPRFLMRLGVKAVVWDM 263
Query 245 RFRARHGRRIV 255
R R G +V
Sbjct 264 RMRRITGATVV 274
Lambda K H
0.326 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 374688414660
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40