BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2239c
Length=158
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609376|ref|NP_216755.1| hypothetical protein Rv2239c [Mycob... 314 2e-84
gi|340627243|ref|YP_004745695.1| hypothetical protein MCAN_22611... 313 6e-84
gi|289750837|ref|ZP_06510215.1| conserved hypothetical protein [... 303 5e-81
gi|289570360|ref|ZP_06450587.1| LOW QUALITY PROTEIN: conserved h... 300 5e-80
gi|297634834|ref|ZP_06952614.1| hypothetical protein MtubK4_1195... 276 5e-73
gi|41408090|ref|NP_960926.1| hypothetical protein MAP1992c [Myco... 268 1e-70
gi|296166130|ref|ZP_06848575.1| conserved hypothetical protein [... 268 2e-70
gi|240170074|ref|ZP_04748733.1| hypothetical protein MkanA1_1222... 266 7e-70
gi|118617009|ref|YP_905341.1| hypothetical protein MUL_1310 [Myc... 265 1e-69
gi|342857264|ref|ZP_08713920.1| hypothetical protein MCOL_00260 ... 259 6e-68
gi|118465614|ref|YP_881407.1| hypothetical protein MAV_2198 [Myc... 258 2e-67
gi|254819064|ref|ZP_05224065.1| hypothetical protein MintA_04011... 255 2e-66
gi|15827868|ref|NP_302131.1| hypothetical protein ML1649 [Mycoba... 243 6e-63
gi|333990297|ref|YP_004522911.1| hypothetical protein JDM601_165... 234 3e-60
gi|145223370|ref|YP_001134048.1| hypothetical protein Mflv_2783 ... 228 3e-58
gi|315443829|ref|YP_004076708.1| hypothetical protein Mspyr1_222... 227 4e-58
gi|118471493|ref|YP_888596.1| hypothetical protein MSMEG_4321 [M... 223 7e-57
gi|325676999|ref|ZP_08156670.1| hypothetical protein HMPREF0724_... 219 1e-55
gi|312140254|ref|YP_004007590.1| hypothetical protein REQ_28920 ... 219 1e-55
gi|108800326|ref|YP_640523.1| hypothetical protein Mmcs_3360 [My... 218 3e-55
gi|120404709|ref|YP_954538.1| hypothetical protein Mvan_3750 [My... 216 8e-55
gi|226360332|ref|YP_002778110.1| hypothetical protein ROP_09180 ... 213 9e-54
gi|111018207|ref|YP_701179.1| hypothetical protein RHA1_ro01195 ... 211 3e-53
gi|226307155|ref|YP_002767115.1| hypothetical protein RER_36680 ... 206 7e-52
gi|54023579|ref|YP_117821.1| hypothetical protein nfa16110 [Noca... 204 4e-51
gi|229490242|ref|ZP_04384084.1| conserved hypothetical protein [... 204 5e-51
gi|169628974|ref|YP_001702623.1| hypothetical protein MAB_1886 [... 197 3e-49
gi|333918900|ref|YP_004492481.1| hypothetical protein AS9A_1229 ... 175 2e-42
gi|257055084|ref|YP_003132916.1| hypothetical protein Svir_10320... 173 6e-42
gi|300784031|ref|YP_003764322.1| hypothetical protein AMED_2114 ... 172 1e-41
gi|317509064|ref|ZP_07966694.1| hypothetical protein HMPREF9336_... 172 1e-41
gi|302525299|ref|ZP_07277641.1| conserved hypothetical protein [... 171 2e-41
gi|343924117|ref|ZP_08763680.1| hypothetical protein GOALK_002_0... 169 1e-40
gi|296140415|ref|YP_003647658.1| hypothetical protein Tpau_2721 ... 167 4e-40
gi|324998906|ref|ZP_08120018.1| hypothetical protein PseP1_09084... 167 4e-40
gi|296395114|ref|YP_003659998.1| hypothetical protein Srot_2733 ... 166 8e-40
gi|262203008|ref|YP_003274216.1| hypothetical protein Gbro_3117 ... 164 4e-39
gi|331695980|ref|YP_004332219.1| hypothetical protein Psed_2142 ... 159 9e-38
gi|326382460|ref|ZP_08204151.1| hypothetical protein SCNU_05960 ... 156 1e-36
gi|238060413|ref|ZP_04605122.1| hypothetical protein MCAG_01379 ... 155 2e-36
gi|284991912|ref|YP_003410466.1| hypothetical protein Gobs_3503 ... 152 2e-35
gi|117928090|ref|YP_872641.1| hypothetical protein Acel_0882 [Ac... 150 7e-35
gi|319948764|ref|ZP_08022883.1| hypothetical protein ES5_05253 [... 149 1e-34
gi|291302249|ref|YP_003513527.1| hypothetical protein Snas_4793 ... 147 4e-34
gi|296270324|ref|YP_003652956.1| hypothetical protein Tbis_2357 ... 147 5e-34
gi|311895888|dbj|BAJ28296.1| hypothetical protein KSE_24820 [Kit... 145 2e-33
gi|320011010|gb|ADW05860.1| hypothetical protein Sfla_4455 [Stre... 143 9e-33
gi|269125891|ref|YP_003299261.1| hypothetical protein Tcur_1647 ... 142 2e-32
gi|290960795|ref|YP_003491977.1| hypothetical protein SCAB_64311... 142 2e-32
gi|29832344|ref|NP_826978.1| hypothetical protein SAV_5801 [Stre... 142 2e-32
>gi|15609376|ref|NP_216755.1| hypothetical protein Rv2239c [Mycobacterium tuberculosis H37Rv]
gi|15841732|ref|NP_336769.1| hypothetical protein MT2299 [Mycobacterium tuberculosis CDC1551]
gi|31793419|ref|NP_855912.1| hypothetical protein Mb2263c [Mycobacterium bovis AF2122/97]
48 more sequence titles
Length=158
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)
Query 1 MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA 60
MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA
Sbjct 1 MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA 60
Query 61 CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP 120
CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP
Sbjct 61 CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP 120
Query 121 AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR 158
AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR
Sbjct 121 AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR 158
>gi|340627243|ref|YP_004745695.1| hypothetical protein MCAN_22611 [Mycobacterium canettii CIPT
140010059]
gi|340005433|emb|CCC44593.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=158
Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 157/158 (99%), Positives = 158/158 (100%), Gaps = 0/158 (0%)
Query 1 MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA 60
MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQ+IQEWGWDEDTDDDIRAAIEEA
Sbjct 1 MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQVIQEWGWDEDTDDDIRAAIEEA 60
Query 61 CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP 120
CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP
Sbjct 61 CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP 120
Query 121 AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR 158
AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR
Sbjct 121 AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR 158
>gi|289750837|ref|ZP_06510215.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289691424|gb|EFD58853.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=153
Score = 303 bits (776), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/153 (99%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 6 VCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGEL 65
+CTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGEL
Sbjct 1 MCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGEL 60
Query 66 LDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAE 125
LDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAE
Sbjct 61 LDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAE 120
Query 126 AAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR 158
AAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR
Sbjct 121 AAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR 153
>gi|289570360|ref|ZP_06450587.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
gi|289544114|gb|EFD47762.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
Length=151
Score = 300 bits (768), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA 60
MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA
Sbjct 1 MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA 60
Query 61 CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP 120
CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP
Sbjct 61 CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP 120
Query 121 AEIAEAAPTAGLMPTSSVNLGNWSASRLVQP 151
AEIAEAAPTAGLMPTSSVNLGNWSASRLVQP
Sbjct 121 AEIAEAAPTAGLMPTSSVNLGNWSASRLVQP 151
>gi|297634834|ref|ZP_06952614.1| hypothetical protein MtubK4_11956 [Mycobacterium tuberculosis
KZN 4207]
gi|306776497|ref|ZP_07414834.1| hypothetical protein TMAG_00432 [Mycobacterium tuberculosis SUMu001]
gi|306789388|ref|ZP_07427710.1| hypothetical protein TMDG_00721 [Mycobacterium tuberculosis SUMu004]
25 more sequence titles
Length=140
Score = 276 bits (707), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL
Sbjct 1 MVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV
Sbjct 61 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 120
Query 139 NLGNWSASRLVQPKSRAGKR 158
NLGNWSASRLVQPKSRAGKR
Sbjct 121 NLGNWSASRLVQPKSRAGKR 140
>gi|41408090|ref|NP_960926.1| hypothetical protein MAP1992c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396445|gb|AAS04309.1| hypothetical protein MAP_1992c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=147
Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/146 (91%), Positives = 142/146 (98%), Gaps = 0/146 (0%)
Query 13 TEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDE 72
EGGSTVVAADHA +YARKLGIQRDQ++QEWGWDEDTDD+IRAA+EEACG +LLDEDTDE
Sbjct 2 VEGGSTVVAADHAPSYARKLGIQRDQVVQEWGWDEDTDDEIRAAVEEACGSDLLDEDTDE 61
Query 73 VIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGL 132
V+DVVLLWWRDGDGDLVDTLMDAI PLAEDGVIWV+TPKTG+PGHVLPAEIAEAAPTAGL
Sbjct 62 VVDVVLLWWRDGDGDLVDTLMDAISPLAEDGVIWVLTPKTGKPGHVLPAEIAEAAPTAGL 121
Query 133 MPTSSVNLGNWSASRLVQPKSRAGKR 158
MPTSSVNLG+WSASRLVQPKSRAGKR
Sbjct 122 MPTSSVNLGDWSASRLVQPKSRAGKR 147
>gi|296166130|ref|ZP_06848575.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898539|gb|EFG78100.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=146
Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/145 (92%), Positives = 141/145 (98%), Gaps = 0/145 (0%)
Query 14 EGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEV 73
+GGSTVVAADHA YARKLGIQRDQ++QEWGWDEDTDDDIRA +EEACGG+LLDEDTDEV
Sbjct 2 QGGSTVVAADHAPGYARKLGIQRDQVVQEWGWDEDTDDDIRADVEEACGGDLLDEDTDEV 61
Query 74 IDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLM 133
+DVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWV+TPKTG+PGHVLPAEIAEAAPTAGLM
Sbjct 62 VDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVLTPKTGKPGHVLPAEIAEAAPTAGLM 121
Query 134 PTSSVNLGNWSASRLVQPKSRAGKR 158
PTSSVNLG+WSASRLVQPKSR GKR
Sbjct 122 PTSSVNLGDWSASRLVQPKSRTGKR 146
>gi|240170074|ref|ZP_04748733.1| hypothetical protein MkanA1_12226 [Mycobacterium kansasii ATCC
12478]
Length=149
Score = 266 bits (680), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/146 (90%), Positives = 141/146 (97%), Gaps = 0/146 (0%)
Query 13 TEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDE 72
+GGSTVVAADHA +YARKLGIQRDQ++QEWGWDED DDDIRAA+EEACG ELLDEDTDE
Sbjct 4 NKGGSTVVAADHAPSYARKLGIQRDQVVQEWGWDEDADDDIRAAVEEACGSELLDEDTDE 63
Query 73 VIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGL 132
V+DVVLLWWRDGDGDLVDTLMDAI PLAEDGVIWV+TPKTG+PGHVLPA+IAEAAPTAGL
Sbjct 64 VVDVVLLWWRDGDGDLVDTLMDAISPLAEDGVIWVLTPKTGRPGHVLPADIAEAAPTAGL 123
Query 133 MPTSSVNLGNWSASRLVQPKSRAGKR 158
MPTSSVNLG+WSASRLVQPKSRAGKR
Sbjct 124 MPTSSVNLGDWSASRLVQPKSRAGKR 149
>gi|118617009|ref|YP_905341.1| hypothetical protein MUL_1310 [Mycobacterium ulcerans Agy99]
gi|183983322|ref|YP_001851613.1| hypothetical protein MMAR_3332 [Mycobacterium marinum M]
gi|118569119|gb|ABL03870.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|183176648|gb|ACC41758.1| conserved protein [Mycobacterium marinum M]
Length=148
Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/145 (89%), Positives = 140/145 (97%), Gaps = 0/145 (0%)
Query 14 EGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEV 73
+GGSTVVAADHA +YARKL IQRDQ++QEWGWDEDTDD+IRAA+EEACG E+LDEDTDEV
Sbjct 4 KGGSTVVAADHAPSYARKLDIQRDQVVQEWGWDEDTDDEIRAAVEEACGSEMLDEDTDEV 63
Query 74 IDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLM 133
+DVVLLWWRD DGDLVDTLMDAI PLAEDGVIWV+TPKTGQPGHVLPA+IAEAAPTAGLM
Sbjct 64 VDVVLLWWRDSDGDLVDTLMDAISPLAEDGVIWVLTPKTGQPGHVLPADIAEAAPTAGLM 123
Query 134 PTSSVNLGNWSASRLVQPKSRAGKR 158
PTSSVNLGNW+ASRLVQPKSRAGKR
Sbjct 124 PTSSVNLGNWAASRLVQPKSRAGKR 148
>gi|342857264|ref|ZP_08713920.1| hypothetical protein MCOL_00260 [Mycobacterium colombiense CECT
3035]
gi|342134597|gb|EGT87763.1| hypothetical protein MCOL_00260 [Mycobacterium colombiense CECT
3035]
Length=140
Score = 259 bits (663), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/140 (91%), Positives = 138/140 (99%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAADHA +YARKLGIQRDQ++QEWGWDEDTDD+IRAA+EEACG +LLDEDTDEV+DVVL
Sbjct 1 MVAADHAPSYARKLGIQRDQVVQEWGWDEDTDDEIRAAVEEACGSDLLDEDTDEVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRDGDGDLVDTLMDAIGPLAEDGVIWV+TPKTG+PGHVLPAEIAEAAPTAGLMPTSSV
Sbjct 61 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVLTPKTGKPGHVLPAEIAEAAPTAGLMPTSSV 120
Query 139 NLGNWSASRLVQPKSRAGKR 158
NLG+WSASRLVQPKSRAGKR
Sbjct 121 NLGDWSASRLVQPKSRAGKR 140
>gi|118465614|ref|YP_881407.1| hypothetical protein MAV_2198 [Mycobacterium avium 104]
gi|254774908|ref|ZP_05216424.1| hypothetical protein MaviaA2_09575 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166901|gb|ABK67798.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336461852|gb|EGO40708.1| Protein of unknown function (DUF3052) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=140
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/140 (90%), Positives = 137/140 (98%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAADHA +YARKLGIQRDQ++QEWGWDEDTDD+IRAA+EEACG +LLDEDTDEV+DVVL
Sbjct 1 MVAADHAPSYARKLGIQRDQVVQEWGWDEDTDDEIRAAVEEACGSDLLDEDTDEVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRDGDGDLVDTLMDAI PLAEDGVIWV+TPKTG+PGHVLPAEIAEAAPTAGLMPTSSV
Sbjct 61 LWWRDGDGDLVDTLMDAISPLAEDGVIWVLTPKTGKPGHVLPAEIAEAAPTAGLMPTSSV 120
Query 139 NLGNWSASRLVQPKSRAGKR 158
NLG+WSASRLVQPKSRAGKR
Sbjct 121 NLGDWSASRLVQPKSRAGKR 140
>gi|254819064|ref|ZP_05224065.1| hypothetical protein MintA_04011 [Mycobacterium intracellulare
ATCC 13950]
Length=140
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/140 (90%), Positives = 136/140 (98%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAADHA +YARKLGIQ D ++QEWGWDEDTDD+IRAA+EEACG ELLDEDTDEV+DVVL
Sbjct 1 MVAADHAPSYARKLGIQPDHVVQEWGWDEDTDDEIRAAVEEACGSELLDEDTDEVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRDGDGDLVDTLMDAIGPLAEDGVIWV+TPKTG+PGHVLPAEIAEAAPTAGLMPTSSV
Sbjct 61 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVLTPKTGKPGHVLPAEIAEAAPTAGLMPTSSV 120
Query 139 NLGNWSASRLVQPKSRAGKR 158
NLG+W+ASRLVQPKSRAGKR
Sbjct 121 NLGDWAASRLVQPKSRAGKR 140
>gi|15827868|ref|NP_302131.1| hypothetical protein ML1649 [Mycobacterium leprae TN]
gi|221230345|ref|YP_002503761.1| hypothetical protein MLBr_01649 [Mycobacterium leprae Br4923]
gi|3150234|emb|CAA19207.1| hypothetical protein MLCB1243.26 [Mycobacterium leprae]
gi|13093420|emb|CAC30600.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933452|emb|CAR71744.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=140
Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/140 (86%), Positives = 132/140 (95%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAADH ++ARKLGIQ+ Q++QEWGWDEDTDDDIRA++EEACGGELLDEDTDEV+DVVL
Sbjct 1 MVAADHTPSFARKLGIQQGQVVQEWGWDEDTDDDIRASVEEACGGELLDEDTDEVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRDGDGDLVDTLMDAI P AEDGVIWV+TPKTG+PGHV PAEIAEAAPTAGLM TSSV
Sbjct 61 LWWRDGDGDLVDTLMDAITPRAEDGVIWVLTPKTGKPGHVPPAEIAEAAPTAGLMLTSSV 120
Query 139 NLGNWSASRLVQPKSRAGKR 158
NLG+WSASRLVQPKSR GKR
Sbjct 121 NLGDWSASRLVQPKSRIGKR 140
>gi|333990297|ref|YP_004522911.1| hypothetical protein JDM601_1657 [Mycobacterium sp. JDM601]
gi|333486265|gb|AEF35657.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=140
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/140 (83%), Positives = 129/140 (93%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAAD+A N+ARKLGI +QL+QE+GWDED DDDIRA +EEACG ELLDEDTDEV+DVVL
Sbjct 1 MVAADNAPNFARKLGIGSNQLVQEFGWDEDADDDIRADVEEACGSELLDEDTDEVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWR+GDGDLVDTLMDAI LA+DGVIWV+TPKTG+ GHV PAEIAE+APTAGLMPTSSV
Sbjct 61 LWWREGDGDLVDTLMDAITALADDGVIWVLTPKTGKSGHVRPAEIAESAPTAGLMPTSSV 120
Query 139 NLGNWSASRLVQPKSRAGKR 158
NLG+WSASRLVQPKSR GKR
Sbjct 121 NLGDWSASRLVQPKSRMGKR 140
>gi|145223370|ref|YP_001134048.1| hypothetical protein Mflv_2783 [Mycobacterium gilvum PYR-GCK]
gi|145215856|gb|ABP45260.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=158
Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/142 (81%), Positives = 126/142 (89%), Gaps = 0/142 (0%)
Query 14 EGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEV 73
EGG TVV+A NYARKLGIQ+DQ++QE GWDEDTDDDIRA IE+ GG+LLDE DEV
Sbjct 12 EGGLTVVSAGDPPNYARKLGIQKDQVVQELGWDEDTDDDIRADIEDESGGDLLDEGADEV 71
Query 74 IDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLM 133
+DVVLLWWRDGDGDLVDTLMDAI PLAEDGVIWVVTPKTG+PGHV PAEIAE+APTAGLM
Sbjct 72 VDVVLLWWRDGDGDLVDTLMDAITPLAEDGVIWVVTPKTGKPGHVQPAEIAESAPTAGLM 131
Query 134 PTSSVNLGNWSASRLVQPKSRA 155
TSS NLG+W ASRLVQPK++A
Sbjct 132 QTSSANLGDWIASRLVQPKAKA 153
>gi|315443829|ref|YP_004076708.1| hypothetical protein Mspyr1_22230 [Mycobacterium sp. Spyr1]
gi|315262132|gb|ADT98873.1| hypothetical protein Mspyr1_22230 [Mycobacterium sp. Spyr1]
Length=158
Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/142 (81%), Positives = 126/142 (89%), Gaps = 0/142 (0%)
Query 14 EGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEV 73
EGG TVV+A NYARKLGIQ+DQ++QE GWDEDTDDDIRA IE+ GG+LLDE DEV
Sbjct 12 EGGLTVVSAGDPPNYARKLGIQKDQVVQELGWDEDTDDDIRADIEDESGGDLLDEGADEV 71
Query 74 IDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLM 133
+DVVLLWWRDGDGDLVDTLMDAI PLAEDGVIWVVTPKTG+PGHV PAEIAE+APTAGLM
Sbjct 72 VDVVLLWWRDGDGDLVDTLMDAITPLAEDGVIWVVTPKTGKPGHVQPAEIAESAPTAGLM 131
Query 134 PTSSVNLGNWSASRLVQPKSRA 155
TSS NLG+W ASRLVQPK++A
Sbjct 132 QTSSANLGDWIASRLVQPKAKA 153
>gi|118471493|ref|YP_888596.1| hypothetical protein MSMEG_4321 [Mycobacterium smegmatis str.
MC2 155]
gi|118172780|gb|ABK73676.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=145
Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/137 (82%), Positives = 123/137 (90%), Gaps = 1/137 (0%)
Query 23 DHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWR 82
D NYAR LGIQ+DQ++QE GWDEDTDDDIRA +EEACG ELLDED+DEV+DVVLLWWR
Sbjct 8 DSDPNYARILGIQKDQVVQELGWDEDTDDDIRADVEEACGSELLDEDSDEVVDVVLLWWR 67
Query 83 DGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGN 142
D DGDLVD LMDAI PLAEDGVIWV+TPKTG+PGHVLPAEIAE+APTAGLM TSS LG+
Sbjct 68 DNDGDLVDRLMDAITPLAEDGVIWVLTPKTGKPGHVLPAEIAESAPTAGLMQTSSAKLGD 127
Query 143 WSASRLVQPKSR-AGKR 158
W+ASRLVQPKS+ AGKR
Sbjct 128 WTASRLVQPKSKAAGKR 144
>gi|325676999|ref|ZP_08156670.1| hypothetical protein HMPREF0724_14453 [Rhodococcus equi ATCC
33707]
gi|325552161|gb|EGD21852.1| hypothetical protein HMPREF0724_14453 [Rhodococcus equi ATCC
33707]
Length=241
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/146 (73%), Positives = 126/146 (87%), Gaps = 0/146 (0%)
Query 13 TEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDE 72
TE +TVVAA A NYA+KLGI + ++QE GWDEDTDDDIR+A+EE GGE++DE++DE
Sbjct 96 TEEDTTVVAAADAQNYAQKLGITPEMVVQELGWDEDTDDDIRSAVEETIGGEMVDEESDE 155
Query 73 VIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGL 132
V+DVVLLWWRDGDGDLVD LMDAIGPL++DG +WV+TPKTGQPGHV P+EIAE+APTAGL
Sbjct 156 VMDVVLLWWRDGDGDLVDALMDAIGPLSDDGFVWVLTPKTGQPGHVEPSEIAESAPTAGL 215
Query 133 MPTSSVNLGNWSASRLVQPKSRAGKR 158
TS+ NLG WS SRLVQPK+RA KR
Sbjct 216 TQTSAANLGMWSGSRLVQPKARAPKR 241
>gi|312140254|ref|YP_004007590.1| hypothetical protein REQ_28920 [Rhodococcus equi 103S]
gi|311889593|emb|CBH48910.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=221
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/146 (73%), Positives = 126/146 (87%), Gaps = 0/146 (0%)
Query 13 TEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDE 72
TE +TVVAA A NYA+KLGI + ++QE GWDEDTDDDIR+A+EE GGE++DE++DE
Sbjct 76 TEEDTTVVAAADAQNYAQKLGITPEMVVQELGWDEDTDDDIRSAVEETIGGEMVDEESDE 135
Query 73 VIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGL 132
V+DVVLLWWRDGDGDLVD LMDAIGPL++DG +WV+TPKTGQPGHV P+EIAE+APTAGL
Sbjct 136 VMDVVLLWWRDGDGDLVDALMDAIGPLSDDGFVWVLTPKTGQPGHVEPSEIAESAPTAGL 195
Query 133 MPTSSVNLGNWSASRLVQPKSRAGKR 158
TS+ NLG WS SRLVQPK+RA KR
Sbjct 196 TQTSAANLGMWSGSRLVQPKARAPKR 221
>gi|108800326|ref|YP_640523.1| hypothetical protein Mmcs_3360 [Mycobacterium sp. MCS]
gi|119869454|ref|YP_939406.1| hypothetical protein Mkms_3422 [Mycobacterium sp. KMS]
gi|126435949|ref|YP_001071640.1| hypothetical protein Mjls_3371 [Mycobacterium sp. JLS]
gi|108770745|gb|ABG09467.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695543|gb|ABL92616.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126235749|gb|ABN99149.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=140
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/139 (78%), Positives = 122/139 (88%), Gaps = 0/139 (0%)
Query 20 VAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLL 79
+AA A NYA++LGI+ DQ++QE GWDED DDDIRA IE+ACGGELLDED DEVIDVVLL
Sbjct 1 MAAADAPNYAQRLGIENDQVVQELGWDEDVDDDIRADIEDACGGELLDEDADEVIDVVLL 60
Query 80 WWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVN 139
WWRD DGDLVD LMDAI PLA+DGVIWV+TPKTG+PGHV PA+IAE+APTAGLM TSS N
Sbjct 61 WWRDDDGDLVDALMDAITPLADDGVIWVITPKTGKPGHVQPADIAESAPTAGLMQTSSAN 120
Query 140 LGNWSASRLVQPKSRAGKR 158
LG+W ASRLVQPKS+A R
Sbjct 121 LGDWIASRLVQPKSKAAGR 139
>gi|120404709|ref|YP_954538.1| hypothetical protein Mvan_3750 [Mycobacterium vanbaalenii PYR-1]
gi|119957527|gb|ABM14532.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=142
Score = 216 bits (550), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/137 (79%), Positives = 122/137 (90%), Gaps = 0/137 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+V+A NYAR LGIQ++Q++QE GWDEDTDDDIRA IE+ GG+LLDED DEV+DVVL
Sbjct 1 MVSAGEPPNYARVLGIQKNQVVQELGWDEDTDDDIRADIEDESGGDLLDEDADEVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRDGDGDLVDTLMDAI PLA+DGVIWVVTPKTG+PGHV PAEIAE+APTAGLM TSS
Sbjct 61 LWWRDGDGDLVDTLMDAITPLADDGVIWVVTPKTGKPGHVQPAEIAESAPTAGLMQTSSA 120
Query 139 NLGNWSASRLVQPKSRA 155
NLG+W ASRLVQPK++A
Sbjct 121 NLGDWIASRLVQPKAKA 137
>gi|226360332|ref|YP_002778110.1| hypothetical protein ROP_09180 [Rhodococcus opacus B4]
gi|226238817|dbj|BAH49165.1| hypothetical protein [Rhodococcus opacus B4]
Length=141
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/141 (76%), Positives = 121/141 (86%), Gaps = 1/141 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAA A NYA+KLGI D +QE GWDEDTDDD+RAA+E+ GGELLDED+DEVIDVVL
Sbjct 1 MVAAADAQNYAQKLGITADMAVQELGWDEDTDDDLRAAVEDTIGGELLDEDSDEVIDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRD DGDLVD LMDAIGPLA+DG +WV+TPKTGQPGHV P+EIAE+APTAGL TS+
Sbjct 61 LWWRDEDGDLVDALMDAIGPLADDGFVWVLTPKTGQPGHVEPSEIAESAPTAGLTQTSAA 120
Query 139 NLGNWSASRLVQPKSR-AGKR 158
NLG+WS SRLVQPKSR A KR
Sbjct 121 NLGDWSGSRLVQPKSRPANKR 141
>gi|111018207|ref|YP_701179.1| hypothetical protein RHA1_ro01195 [Rhodococcus jostii RHA1]
gi|110817737|gb|ABG93021.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=141
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/141 (76%), Positives = 121/141 (86%), Gaps = 1/141 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAA A NYA+KLGI D +QE GWDEDTDDD+RAA+E+ GGELLDED+DEVIDVVL
Sbjct 1 MVAAADAQNYAQKLGITADMAVQELGWDEDTDDDLRAAVEDTIGGELLDEDSDEVIDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRD DGDLVD LMDAIGPLA++G +WV+TPKTGQPGHV P+EIAE+APTAGL TS+
Sbjct 61 LWWRDEDGDLVDALMDAIGPLADEGFVWVLTPKTGQPGHVEPSEIAESAPTAGLTQTSAA 120
Query 139 NLGNWSASRLVQPKSR-AGKR 158
NLG+WS SRLVQPKSR A KR
Sbjct 121 NLGDWSGSRLVQPKSRPANKR 141
>gi|226307155|ref|YP_002767115.1| hypothetical protein RER_36680 [Rhodococcus erythropolis PR4]
gi|226186272|dbj|BAH34376.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=156
Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/142 (74%), Positives = 120/142 (85%), Gaps = 1/142 (0%)
Query 18 TVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVV 77
TVVAA A NYA+KLGI D ++QE GWDEDTDD IRAA+EE GGE+LDED+DEVIDVV
Sbjct 15 TVVAAADAQNYAQKLGITTDMVVQELGWDEDTDDGIRAAVEETIGGEMLDEDSDEVIDVV 74
Query 78 LLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSS 137
LLWWRD DGDLVD LMDAIGPLA++G +WV+TPKTG GHV P+EIAE+APTAGL TS+
Sbjct 75 LLWWRDEDGDLVDALMDAIGPLADEGFVWVLTPKTGLDGHVEPSEIAESAPTAGLTQTSA 134
Query 138 VNLGNWSASRLVQPKSR-AGKR 158
NLG+WS SRLVQPK+R A KR
Sbjct 135 ANLGDWSGSRLVQPKARPANKR 156
>gi|54023579|ref|YP_117821.1| hypothetical protein nfa16110 [Nocardia farcinica IFM 10152]
gi|54015087|dbj|BAD56457.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=156
Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/145 (68%), Positives = 121/145 (84%), Gaps = 0/145 (0%)
Query 14 EGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEV 73
E +TVVAA A NYA+KLGI ++QE GWDEDTDDDIRA +E+ACG E++DED+DEV
Sbjct 12 EEDTTVVAAADAQNYAQKLGITHGMVVQELGWDEDTDDDIRADVEDACGSEMVDEDSDEV 71
Query 74 IDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLM 133
+D VLLWWRDGDGDL D LM+ I PLA+DG IWV+TPKTG+PGHV P+EIAEAAPTAGL
Sbjct 72 VDAVLLWWRDGDGDLADELMEVISPLADDGFIWVLTPKTGRPGHVDPSEIAEAAPTAGLT 131
Query 134 PTSSVNLGNWSASRLVQPKSRAGKR 158
TS+++LG+W+ SRLVQPK+ + +R
Sbjct 132 QTSAISLGSWTGSRLVQPKAPSKQR 156
>gi|229490242|ref|ZP_04384084.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322774|gb|EEN88553.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=141
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/141 (74%), Positives = 119/141 (85%), Gaps = 1/141 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAA A NYA+KLGI D ++QE GWDEDTDD IRAA+EE GGE+LDED+DEVIDVVL
Sbjct 1 MVAAADAQNYAQKLGITTDMVVQELGWDEDTDDGIRAAVEETIGGEMLDEDSDEVIDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRD DGDLVD LMDAIGPLA++G +WV+TPKTG GHV P+EIAE+APTAGL TS+
Sbjct 61 LWWRDEDGDLVDALMDAIGPLADEGFVWVLTPKTGLDGHVEPSEIAESAPTAGLTQTSAA 120
Query 139 NLGNWSASRLVQPKSR-AGKR 158
NLG+WS SRLVQPK+R A KR
Sbjct 121 NLGDWSGSRLVQPKARPANKR 141
>gi|169628974|ref|YP_001702623.1| hypothetical protein MAB_1886 [Mycobacterium abscessus ATCC 19977]
gi|169240941|emb|CAM61969.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=141
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/141 (81%), Positives = 128/141 (91%), Gaps = 1/141 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
+VAA ASNYARKLGIQRDQL+QE GWDEDTDDDIRA IE+ACG ELLDED+D+V+DVVL
Sbjct 1 MVAAADASNYARKLGIQRDQLVQELGWDEDTDDDIRADIEDACGSELLDEDSDDVVDVVL 60
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWRD DGDLVD LMDAI PLAEDGVIWV+TPKTG+ GHV P+EIAE+APTAGL+ TSS+
Sbjct 61 LWWRDDDGDLVDALMDAITPLAEDGVIWVLTPKTGKSGHVQPSEIAESAPTAGLVQTSSL 120
Query 139 NLGNWSASRLVQPK-SRAGKR 158
NLG+WSA+RLVQPK SR G+R
Sbjct 121 NLGDWSATRLVQPKSSRGGRR 141
>gi|333918900|ref|YP_004492481.1| hypothetical protein AS9A_1229 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481121|gb|AEF39681.1| hypothetical protein AS9A_1229 [Amycolicicoccus subflavus DQS3-9A1]
Length=139
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/139 (67%), Positives = 111/139 (80%), Gaps = 0/139 (0%)
Query 20 VAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLL 79
+A A YA +LGI ++QE GWDED DDIR ++EE CG +LLDEDTDEV+DVVLL
Sbjct 1 MAGTDARTYAERLGITNGMVVQELGWDEDASDDIRDSVEERCGDDLLDEDTDEVVDVVLL 60
Query 80 WWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVN 139
WWRDGDGDLVD LMDAI PL++DG IWV++PKTG PGHV P+EIAE+APTAGL T +VN
Sbjct 61 WWRDGDGDLVDALMDAIAPLSDDGCIWVLSPKTGTPGHVEPSEIAESAPTAGLTQTLTVN 120
Query 140 LGNWSASRLVQPKSRAGKR 158
LG W +RLVQP++R GKR
Sbjct 121 LGAWMGARLVQPRARVGKR 139
>gi|257055084|ref|YP_003132916.1| hypothetical protein Svir_10320 [Saccharomonospora viridis DSM
43017]
gi|256584956|gb|ACU96089.1| hypothetical protein Svir_10320 [Saccharomonospora viridis DSM
43017]
Length=138
Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/130 (67%), Positives = 109/130 (84%), Gaps = 2/130 (1%)
Query 26 SNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDGD 85
++ A +LGI+ D ++QE GWDED D+D+RAAIEE GGELLDED DEVIDVVLLWWRDGD
Sbjct 10 NSVAERLGIKPDMVVQELGWDEDVDEDVRAAIEEYIGGELLDEDADEVIDVVLLWWRDGD 69
Query 86 GDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLG-NWS 144
GDL D L+DA PLAE+GV+WV+TPKTGQPGHV P+EIAEA PT G+ TS++++G W+
Sbjct 70 GDLGDALVDARAPLAENGVVWVLTPKTGQPGHVEPSEIAEAVPTVGMSQTSNLSIGARWT 129
Query 145 ASRLVQPKSR 154
A+RLV P+S+
Sbjct 130 ATRLV-PRSK 138
>gi|300784031|ref|YP_003764322.1| hypothetical protein AMED_2114 [Amycolatopsis mediterranei U32]
gi|299793545|gb|ADJ43920.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340525434|gb|AEK40639.1| hypothetical protein RAM_10745 [Amycolatopsis mediterranei S699]
Length=143
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/134 (64%), Positives = 108/134 (81%), Gaps = 1/134 (0%)
Query 26 SNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDGD 85
S+ A +LGI+ + ++QE GWDED DDD+RAAIEE GG++LDE+ DEVIDVVLLWWR+ D
Sbjct 10 SSVAERLGIKPEMVVQEIGWDEDVDDDVRAAIEEQIGGDILDEEADEVIDVVLLWWREDD 69
Query 86 GDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLG-NWS 144
GDL D L+DA GPL E GVIWV+TPKTGQPGHV P+EIAEA P GL T+++++G NW
Sbjct 70 GDLGDALIDARGPLEETGVIWVLTPKTGQPGHVEPSEIAEAVPAVGLAQTANISVGPNWI 129
Query 145 ASRLVQPKSRAGKR 158
+RLV PKS++ +R
Sbjct 130 GTRLVSPKSKSKQR 143
>gi|317509064|ref|ZP_07966694.1| hypothetical protein HMPREF9336_03066 [Segniliparus rugosus ATCC
BAA-974]
gi|316252653|gb|EFV12093.1| hypothetical protein HMPREF9336_03066 [Segniliparus rugosus ATCC
BAA-974]
Length=141
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/138 (61%), Positives = 107/138 (78%), Gaps = 0/138 (0%)
Query 21 AADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLW 80
AA A+KLGI D ++QE+GWDED D++IR+ I+EA G +LLDED EV+DVVLLW
Sbjct 3 AAQTNEQAAQKLGISADMVVQEFGWDEDVDEEIRSDIQEALGADLLDEDAGEVVDVVLLW 62
Query 81 WRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNL 140
WRDGDGDLVD L+DAI LAEDG IWV++PKTGQPG+V +EI+EAAPTAGL T + L
Sbjct 63 WRDGDGDLVDALVDAIELLAEDGFIWVLSPKTGQPGYVEQSEISEAAPTAGLATTKVIGL 122
Query 141 GNWSASRLVQPKSRAGKR 158
G+WS +R+VQ K++ +
Sbjct 123 GDWSGTRIVQLKAKGHSK 140
>gi|302525299|ref|ZP_07277641.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434194|gb|EFL06010.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=144
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/143 (64%), Positives = 108/143 (76%), Gaps = 3/143 (2%)
Query 19 VVAADHASN--YARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDV 76
+VAA A N A LGI+ D ++QE GWDED DDD+RAAIEE GGELLDED EVIDV
Sbjct 1 MVAAGDAGNAGVAESLGIKPDMVVQEIGWDEDVDDDVRAAIEETIGGELLDEDAQEVIDV 60
Query 77 VLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTS 136
VLLWWRD DGDL D L+DA GPL E+GVIWV+TPKTGQPGHV P++IAEA P GL T+
Sbjct 61 VLLWWRDNDGDLGDALVDARGPLDENGVIWVLTPKTGQPGHVEPSDIAEAVPQVGLAQTA 120
Query 137 SVNLG-NWSASRLVQPKSRAGKR 158
++++G W +RLV PKS K+
Sbjct 121 NISVGPGWLGTRLVSPKSSKAKQ 143
>gi|343924117|ref|ZP_08763680.1| hypothetical protein GOALK_002_00710 [Gordonia alkanivorans NBRC
16433]
gi|343765922|dbj|GAA10606.1| hypothetical protein GOALK_002_00710 [Gordonia alkanivorans NBRC
16433]
Length=142
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 119/140 (85%), Gaps = 0/140 (0%)
Query 19 VVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
V A D + A+KLG++ ++QE GWDEDTDD++RA IE+A E++DED D+V+DVV+
Sbjct 2 VAATDGTGSNAQKLGLKAGLVVQEVGWDEDTDDELRADIEDAIDAEMVDEDADDVVDVVV 61
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LWWR+GDGDLVD LMDAIGPLAEDG +WV +PKTG+PG+V P+EIAEAAPTAGL TS++
Sbjct 62 LWWREGDGDLVDALMDAIGPLAEDGYVWVFSPKTGKPGYVDPSEIAEAAPTAGLTQTSAI 121
Query 139 NLGNWSASRLVQPKSRAGKR 158
+LG+WSA+RLVQPK+R+GK+
Sbjct 122 SLGDWSAARLVQPKARSGKK 141
>gi|296140415|ref|YP_003647658.1| hypothetical protein Tpau_2721 [Tsukamurella paurometabola DSM
20162]
gi|296028549|gb|ADG79319.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=138
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/133 (71%), Positives = 112/133 (85%), Gaps = 1/133 (0%)
Query 27 NYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDGDG 86
++A+K+G+Q ++QE GWDEDTDDD+R +IEE GGE+LDEDTDEV+DVV+LWWRD DG
Sbjct 6 SFAQKMGLQPGNIVQEIGWDEDTDDDLRLSIEELIGGEMLDEDTDEVVDVVVLWWRDDDG 65
Query 87 DLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGNWSAS 146
DLVDTLMD I PL++DG +WV++PKTGQ GHV P+EIAEAAPTAGL TSS NLG W S
Sbjct 66 DLVDTLMDVITPLSDDGYVWVLSPKTGQDGHVQPSEIAEAAPTAGLTQTSSTNLGTWIGS 125
Query 147 RLVQPKS-RAGKR 158
RLVQPKS RA KR
Sbjct 126 RLVQPKSGRAAKR 138
>gi|324998906|ref|ZP_08120018.1| hypothetical protein PseP1_09084 [Pseudonocardia sp. P1]
Length=143
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/142 (64%), Positives = 110/142 (78%), Gaps = 2/142 (1%)
Query 19 VVAADH-ASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVV 77
V AAD AS+ A KLGI+ Q++QE G+D D D+ +R A+EE G ELLDED EVIDVV
Sbjct 2 VTAADAGASDIAGKLGIEPGQIVQELGYDTDVDEQVRDAVEEITGEELLDEDAQEVIDVV 61
Query 78 LLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSS 137
LLW+R+GDGDLVDTL+DA PLA+DGV+WV+TPKTG+ GH+ P+EIAEAAPTAGL TS+
Sbjct 62 LLWFREGDGDLVDTLVDARTPLADDGVVWVLTPKTGRDGHLQPSEIAEAAPTAGLSQTSN 121
Query 138 VNLG-NWSASRLVQPKSRAGKR 158
LG +W S+LV PK GKR
Sbjct 122 ATLGDDWVGSKLVPPKQGKGKR 143
>gi|296395114|ref|YP_003659998.1| hypothetical protein Srot_2733 [Segniliparus rotundus DSM 44985]
gi|296182261|gb|ADG99167.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=140
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/138 (59%), Positives = 106/138 (77%), Gaps = 0/138 (0%)
Query 21 AADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLW 80
AA + A+KLGI D ++QE+GWDED D+ IR I++A G +LLDED EV+DVVLLW
Sbjct 3 AAQTNEHAAQKLGIAPDMVVQEFGWDEDVDEQIRTDIQDALGADLLDEDAGEVVDVVLLW 62
Query 81 WRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNL 140
WR+GDGDLVD L+DAI LAEDG IWV++PKTG PG++ +EI+EAAPTAGL T + L
Sbjct 63 WREGDGDLVDALVDAIELLAEDGFIWVLSPKTGHPGYIEQSEISEAAPTAGLATTKVIGL 122
Query 141 GNWSASRLVQPKSRAGKR 158
G+WS +R+VQ K++ K+
Sbjct 123 GDWSGTRIVQLKAKGHKK 140
>gi|262203008|ref|YP_003274216.1| hypothetical protein Gbro_3117 [Gordonia bronchialis DSM 43247]
gi|262086355|gb|ACY22323.1| hypothetical protein Gbro_3117 [Gordonia bronchialis DSM 43247]
Length=144
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/136 (68%), Positives = 114/136 (84%), Gaps = 0/136 (0%)
Query 23 DHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWR 82
+ A + A+KLG+Q ++QE GWDEDTDDD+RA IE+A G ++LD+D+D+VIDVV+LWWR
Sbjct 8 NSADSRAQKLGLQSGMVVQELGWDEDTDDDLRADIEDAIGADMLDDDSDDVIDVVVLWWR 67
Query 83 DGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGN 142
D DGDLVD LMDAIGPLA+DG +WV +PKTG G+V P+EIAEAAPTAGL TS V+LG
Sbjct 68 DDDGDLVDALMDAIGPLADDGFVWVFSPKTGNDGYVDPSEIAEAAPTAGLTQTSVVSLGE 127
Query 143 WSASRLVQPKSRAGKR 158
WS SRLVQPK+R+GKR
Sbjct 128 WSGSRLVQPKARSGKR 143
>gi|331695980|ref|YP_004332219.1| hypothetical protein Psed_2142 [Pseudonocardia dioxanivorans
CB1190]
gi|326950669|gb|AEA24366.1| hypothetical protein Psed_2142 [Pseudonocardia dioxanivorans
CB1190]
Length=144
Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/138 (59%), Positives = 106/138 (77%), Gaps = 1/138 (0%)
Query 22 ADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWW 81
A S+ A KLGI+ ++QE GWD D D+ +R A+EE G ELLDED EVIDVVL+W+
Sbjct 7 AGRTSDIAGKLGIEPGMVVQELGWDSDVDEAVRDAVEERSGDELLDEDAQEVIDVVLMWF 66
Query 82 RDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLG 141
R+GDGDLVD L+DA GPLA++GV+WV+TPKTG+ GH+ P+EIAEAAPTAGL TS+V++
Sbjct 67 REGDGDLVDALVDARGPLADNGVVWVLTPKTGRTGHLEPSEIAEAAPTAGLSQTSNVSVT 126
Query 142 N-WSASRLVQPKSRAGKR 158
+ W+ +RLV PK +R
Sbjct 127 DEWAGARLVAPKQGKARR 144
>gi|326382460|ref|ZP_08204151.1| hypothetical protein SCNU_05960 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198579|gb|EGD55762.1| hypothetical protein SCNU_05960 [Gordonia neofelifaecis NRRL
B-59395]
Length=138
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/130 (66%), Positives = 104/130 (80%), Gaps = 0/130 (0%)
Query 29 ARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDGDGDL 88
A KLG ++QE GWDEDTDDD+R IE+A E+LD+D +V+D V+LWWRD DGDL
Sbjct 9 AVKLGFTNGMVVQEIGWDEDTDDDLRIEIEDAIDAEMLDDDAVDVMDAVVLWWRDDDGDL 68
Query 89 VDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGNWSASRL 148
VD LMDAIGPLAE G IWV++PKTG+ G+V P+EIAEAAPTAGL TS ++LG+WS +RL
Sbjct 69 VDALMDAIGPLAEGGFIWVLSPKTGRDGYVDPSEIAEAAPTAGLTQTSVISLGDWSGARL 128
Query 149 VQPKSRAGKR 158
V PK+RAGKR
Sbjct 129 VTPKARAGKR 138
>gi|238060413|ref|ZP_04605122.1| hypothetical protein MCAG_01379 [Micromonospora sp. ATCC 39149]
gi|237882224|gb|EEP71052.1| hypothetical protein MCAG_01379 [Micromonospora sp. ATCC 39149]
Length=145
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/139 (55%), Positives = 106/139 (77%), Gaps = 2/139 (1%)
Query 21 AADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLW 80
AAD + A + GI+ ++ E G+DED D D+R A+ + CG EL+DEDTDEV+D VL+W
Sbjct 8 AADGVRSLADRFGIEPGMVVMEMGYDEDVDQDLRDALTDRCG-ELVDEDTDEVVDAVLVW 66
Query 81 WRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNL 140
+RDGDGDL + L+DA+GPLA++GV+W++TPK G+ GHV P+E+AE+APTAGL TS+VN
Sbjct 67 YRDGDGDLFELLVDALGPLADNGVVWLLTPKAGREGHVEPSEVAESAPTAGLQQTSTVNA 126
Query 141 G-NWSASRLVQPKSRAGKR 158
G +WS +RLV + GK+
Sbjct 127 GRDWSGARLVLRRGAKGKK 145
>gi|284991912|ref|YP_003410466.1| hypothetical protein Gobs_3503 [Geodermatophilus obscurus DSM
43160]
gi|284065157|gb|ADB76095.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=141
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/135 (56%), Positives = 100/135 (75%), Gaps = 1/135 (0%)
Query 25 ASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDG 84
+++ A +LGI+ ++QE GWDED D+D+R +I E G E++DEDTDEV DVVLLWWR+
Sbjct 7 SASMAARLGIKPGMVVQELGWDEDADEDLRDSIVEVSGSEMVDEDTDEVADVVLLWWRED 66
Query 85 DGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLG-NW 143
DGDL D L DAI LA+DGV+W++ PK+G+PGHV P ++ E APTAGL TSSV+ +W
Sbjct 67 DGDLFDALTDAITSLADDGVVWLLVPKSGRPGHVEPGDVTEVAPTAGLSQTSSVSAAKDW 126
Query 144 SASRLVQPKSRAGKR 158
S RLV PK+ +R
Sbjct 127 SGIRLVTPKAARSRR 141
>gi|117928090|ref|YP_872641.1| hypothetical protein Acel_0882 [Acidothermus cellulolyticus 11B]
gi|117648553|gb|ABK52655.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B]
Length=149
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/127 (58%), Positives = 96/127 (76%), Gaps = 1/127 (0%)
Query 29 ARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDGDGDL 88
A KLG Q++QE G+D D D+D+R AIEE G L+ D D+V+D VLLWWRDGDGDL
Sbjct 21 AEKLGFSAGQVVQEIGYDTDVDEDLRRAIEEVTGNALVGADYDDVVDAVLLWWRDGDGDL 80
Query 89 VDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLG-NWSASR 147
VD L+DA+ LA+ G +WV++PK G+PGHV P++I EAAPTAGL TS+V+ G +WS +R
Sbjct 81 VDALVDALTSLADGGTVWVLSPKAGRPGHVEPSDITEAAPTAGLAQTSTVSAGRDWSGAR 140
Query 148 LVQPKSR 154
LV P+S+
Sbjct 141 LVAPRSK 147
>gi|319948764|ref|ZP_08022883.1| hypothetical protein ES5_05253 [Dietzia cinnamea P4]
gi|319437572|gb|EFV92573.1| hypothetical protein ES5_05253 [Dietzia cinnamea P4]
Length=144
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/136 (55%), Positives = 97/136 (72%), Gaps = 0/136 (0%)
Query 23 DHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWR 82
D A A +L + L+QE GWD D D+ I A+E+A G ELL+EDTDEV+D VLLWWR
Sbjct 9 DGADQVAGQLDLTEGMLVQEVGWDSDCDESISEAVEDAVGSELLEEDTDEVVDAVLLWWR 68
Query 83 DGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGN 142
DGDGDLVD LMD + PLA++G +WV+TPKTG+ GHV PA IAE+A TAG++ T + +G+
Sbjct 69 DGDGDLVDRLMDVVTPLADEGSVWVLTPKTGRDGHVEPAVIAESAQTAGMLQTRTAAIGD 128
Query 143 WSASRLVQPKSRAGKR 158
W SRL K+ ++
Sbjct 129 WVGSRLALRKNSMPRK 144
>gi|291302249|ref|YP_003513527.1| hypothetical protein Snas_4793 [Stackebrandtia nassauensis DSM
44728]
gi|290571469|gb|ADD44434.1| hypothetical protein Snas_4793 [Stackebrandtia nassauensis DSM
44728]
Length=140
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/139 (59%), Positives = 100/139 (72%), Gaps = 2/139 (1%)
Query 17 STVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDV 76
+T +AD KLGI D ++ E G+D D D +R A+ A GEL DEDTDEV+DV
Sbjct 3 ATAGSADGVRTIIDKLGIDTDAVVMEIGFDSDIDSALREAVI-ARVGELHDEDTDEVVDV 61
Query 77 VLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTS 136
VLLWWRD DGDLVD LMDA PL+E+GV+W++TPK G+ GH+ AEI+EAAPTAGL TS
Sbjct 62 VLLWWRDEDGDLVDVLMDARSPLSEEGVVWLLTPKPGRDGHIESAEISEAAPTAGLSSTS 121
Query 137 SVNLG-NWSASRLVQPKSR 154
SVN G +W A+RLV P+ R
Sbjct 122 SVNAGEDWVATRLVAPRGR 140
>gi|296270324|ref|YP_003652956.1| hypothetical protein Tbis_2357 [Thermobispora bispora DSM 43833]
gi|296093111|gb|ADG89063.1| hypothetical protein Tbis_2357 [Thermobispora bispora DSM 43833]
Length=144
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/139 (54%), Positives = 98/139 (71%), Gaps = 1/139 (0%)
Query 17 STVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDV 76
+T A A +LG + Q++QE GWDED D+++RA+IEE G EL+DE+ D+V+D
Sbjct 5 ATAGQAQGTRGLAERLGFKAGQVVQEVGWDEDCDEELRASIEELTGNELVDEEYDDVVDA 64
Query 77 VLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTS 136
VLLWWRDGDGDL D L DA+ LA+ G IWV+TPK G+PGHV P+ I E A TAGL TS
Sbjct 65 VLLWWRDGDGDLFDALSDAMTALADGGQIWVLTPKAGRPGHVEPSTIGEEAATAGLSQTS 124
Query 137 SVNLG-NWSASRLVQPKSR 154
S++ +W+ RLV P++R
Sbjct 125 SISAARDWTGIRLVAPRAR 143
>gi|311895888|dbj|BAJ28296.1| hypothetical protein KSE_24820 [Kitasatospora setae KM-6054]
Length=145
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/135 (58%), Positives = 100/135 (75%), Gaps = 2/135 (1%)
Query 26 SNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWWRDGD 85
SN A +LG ++ Q+IQE G+DED+D D+R IEE G EL+DED D+V D VLLW RD D
Sbjct 11 SNPALRLGFEQGQIIQELGYDEDSDQDLREGIEELTGTELVDEDYDDVADGVLLWHRDED 70
Query 86 GDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLG-NWS 144
GDL D L+DA+ LAE G+IW++TPKTG+ GHV EIA+AA TAGL TSSV + +W+
Sbjct 71 GDLTDALVDALEYLAEGGLIWLLTPKTGRDGHVEAHEIADAAKTAGLSQTSSVAIAKDWA 130
Query 145 ASRLVQPK-SRAGKR 158
+RL PK ++AGKR
Sbjct 131 GTRLATPKATKAGKR 145
>gi|320011010|gb|ADW05860.1| hypothetical protein Sfla_4455 [Streptomyces flavogriseus ATCC
33331]
Length=145
Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/141 (53%), Positives = 100/141 (71%), Gaps = 4/141 (2%)
Query 22 ADHA---SNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
ADHA +N A +LG + Q++QE G+D+D + ++R IE G EL+DED D+V DVVL
Sbjct 5 ADHAEERTNTAVRLGFEPGQVVQEIGYDDDVEQELREGIEATIGQELVDEDYDDVADVVL 64
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LW+RD DGDL D L+DAIG + + G +W++TPKTG+ G+V P++I EAA TAGL T S+
Sbjct 65 LWFRDEDGDLTDALVDAIGLIEDGGTVWLLTPKTGRDGYVEPSDINEAAQTAGLAQTKSI 124
Query 139 NLG-NWSASRLVQPKSRAGKR 158
N G +W+ SRLV PK KR
Sbjct 125 NAGKDWTGSRLVTPKGAKAKR 145
>gi|269125891|ref|YP_003299261.1| hypothetical protein Tcur_1647 [Thermomonospora curvata DSM 43183]
gi|268310849|gb|ACY97223.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length=142
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/139 (52%), Positives = 101/139 (73%), Gaps = 1/139 (0%)
Query 17 STVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDV 76
+T A + A +LG + Q++QE G+D+D D+++RA+IE G EL+DED ++ +DV
Sbjct 3 ATAGQAQSERSLAERLGFKPGQVVQEIGYDDDCDEELRASIEAVIGSELVDEDYEDAVDV 62
Query 77 VLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTS 136
V+LWWR+ DGDLVD L+DA PLA+ G IW++TPK G+ GHV P++I EAAPTAGL TS
Sbjct 63 VVLWWREDDGDLVDGLVDARTPLADGGHIWLLTPKAGRAGHVEPSDIGEAAPTAGLAQTS 122
Query 137 SVNLG-NWSASRLVQPKSR 154
S++ +WS +RLV PK R
Sbjct 123 SMSAARDWSGTRLVAPKVR 141
>gi|290960795|ref|YP_003491977.1| hypothetical protein SCAB_64311 [Streptomyces scabiei 87.22]
gi|260650321|emb|CBG73437.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=151
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/141 (52%), Positives = 102/141 (73%), Gaps = 4/141 (2%)
Query 22 ADHA---SNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
ADHA +N A +LG Q +Q++QE G+D+D D ++R +IEE G EL+DED D+V D V+
Sbjct 11 ADHAEERTNPAARLGFQPEQVVQEIGYDDDVDQELRESIEEVVGSELVDEDYDDVADAVV 70
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LW+RD DGDL D L+DA + E G I ++TPKTG+ G+V P++I+EAA TAGL + SV
Sbjct 71 LWFRDDDGDLTDVLVDATTYIEEGGSILLLTPKTGRDGYVEPSDISEAATTAGLSASKSV 130
Query 139 NLG-NWSASRLVQPKSRAGKR 158
++G +WS SRLV PK+ K+
Sbjct 131 SVGKDWSGSRLVTPKAAKSKK 151
>gi|29832344|ref|NP_826978.1| hypothetical protein SAV_5801 [Streptomyces avermitilis MA-4680]
gi|29609463|dbj|BAC73513.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=159
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/141 (53%), Positives = 101/141 (72%), Gaps = 4/141 (2%)
Query 22 ADHA---SNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVL 78
ADHA +N A +LG Q +Q++QE G+D+D D ++R AIEE G EL+DE+ D+V D V+
Sbjct 19 ADHAEERTNPAARLGFQPEQVVQEIGFDDDVDQELREAIEEVIGSELVDEEYDDVADAVV 78
Query 79 LWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSV 138
LW+RD DGDL D L+DA + E G I ++TPKTG+ G+V P++I+EAA TAGL T SV
Sbjct 79 LWFRDEDGDLTDALVDATTYVEEGGTILLLTPKTGRDGYVEPSDISEAATTAGLSQTKSV 138
Query 139 NLG-NWSASRLVQPKSRAGKR 158
++G +WS SRL PK+ KR
Sbjct 139 SVGKDWSGSRLATPKAAKSKR 159
Lambda K H
0.314 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128907826664
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40