BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2248

Length=271
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|148823456|ref|YP_001288210.1|  hypothetical protein TBFG_12277...   542    2e-152
gi|15609385|ref|NP_216764.1|  hypothetical protein Rv2248 [Mycoba...   540    7e-152
gi|339295164|gb|AEJ47275.1|  hypothetical protein CCDC5079_2085 [...   539    1e-151
gi|340627252|ref|YP_004745704.1|  hypothetical protein MCAN_22701...   539    2e-151
gi|31793428|ref|NP_855921.1|  hypothetical protein Mb2272 [Mycoba...   539    2e-151
gi|254551293|ref|ZP_05141740.1|  hypothetical protein Mtube_12660...   538    4e-151
gi|289758373|ref|ZP_06517751.1|  conserved hypothetical protein [...   537    6e-151
gi|294993049|ref|ZP_06798740.1|  hypothetical protein Mtub2_00710...   518    5e-145
gi|240170083|ref|ZP_04748742.1|  hypothetical protein MkanA1_1227...   472    3e-131
gi|254551294|ref|ZP_05141741.1|  hypothetical protein Mtube_12665...   459    1e-127
gi|289754356|ref|ZP_06513734.1|  conserved hypothetical protein [...   457    8e-127
gi|121638131|ref|YP_978355.1|  hypothetical protein BCG_2266 [Myc...   457    9e-127
gi|296166139|ref|ZP_06848584.1|  conserved hypothetical protein [...   453    1e-125
gi|183983331|ref|YP_001851622.1|  hypothetical protein MMAR_3341 ...   444    7e-123
gi|118617000|ref|YP_905332.1|  hypothetical protein MUL_1301 [Myc...   433    1e-119
gi|108798140|ref|YP_638337.1|  hypothetical protein Mmcs_1169 [My...   391    7e-107
gi|126433799|ref|YP_001069490.1|  hypothetical protein Mjls_1196 ...   372    4e-101
gi|120406404|ref|YP_956233.1|  hypothetical protein Mvan_5457 [My...   362    3e-98 
gi|145221927|ref|YP_001132605.1|  hypothetical protein Mflv_1335 ...   350    9e-95 
gi|315446336|ref|YP_004079215.1|  hypothetical protein Mspyr1_484...   346    2e-93 
gi|108797945|ref|YP_638142.1|  hypothetical protein Mmcs_0971 [My...   324    1e-86 
gi|254774257|ref|ZP_05215773.1|  hypothetical protein MaviaA2_062...   303    2e-80 
gi|296168880|ref|ZP_06850551.1|  conserved hypothetical protein [...   288    5e-76 
gi|333990211|ref|YP_004522825.1|  hypothetical protein JDM601_157...   286    3e-75 
gi|120404775|ref|YP_954604.1|  hypothetical protein Mvan_3817 [My...   269    4e-70 
gi|118618130|ref|YP_906462.1|  hypothetical protein MUL_2670 [Myc...   265    5e-69 
gi|183981244|ref|YP_001849535.1|  hypothetical protein MMAR_1222 ...   265    6e-69 
gi|169630696|ref|YP_001704345.1|  hypothetical protein MAB_3617 [...   264    9e-69 
gi|315445750|ref|YP_004078629.1|  hypothetical protein Mspyr1_423...   258    5e-67 
gi|145225402|ref|YP_001136080.1|  hypothetical protein Mflv_4824 ...   256    2e-66 
gi|333991768|ref|YP_004524382.1|  hypothetical protein JDM601_312...   256    2e-66 
gi|41408641|ref|NP_961477.1|  hypothetical protein MAP2543 [Mycob...   244    1e-62 
gi|336458571|gb|EGO37538.1|  hypothetical protein MAPs_11610 [Myc...   242    4e-62 
gi|118471877|ref|YP_886105.1|  hypothetical protein MSMEG_1733 [M...   231    9e-59 
gi|258653209|ref|YP_003202365.1|  hypothetical protein Namu_3039 ...   121    1e-25 
gi|284032296|ref|YP_003382227.1|  hypothetical protein Kfla_4395 ...   113    3e-23 
gi|315500993|ref|YP_004079880.1|  hypothetical protein ML5_0176 [...   110    3e-22 
gi|238062830|ref|ZP_04607539.1|  hypothetical protein MCAG_03796 ...   107    3e-21 
gi|118468379|ref|YP_884671.1|  hypothetical protein MSMEG_0256 [M...   105    1e-20 
gi|254773599|ref|ZP_05215115.1|  hypothetical protein MaviaA2_028...   104    1e-20 
gi|118463860|ref|YP_879922.1|  hypothetical protein MAV_0642 [Myc...   104    1e-20 
gi|302866131|ref|YP_003834768.1|  hypothetical protein Micau_1637...   103    3e-20 
gi|289571958|ref|ZP_06452185.1|  conserved hypothetical protein [...   103    3e-20 
gi|340628688|ref|YP_004747140.1|  hypothetical protein MCAN_37361...   103    4e-20 
gi|308374960|ref|ZP_07442226.2|  hypothetical protein TMGG_01257 ...   103    4e-20 
gi|308232545|ref|ZP_07416408.2|  hypothetical protein TMAG_00205 ...   102    4e-20 
gi|308406227|ref|ZP_07495622.2|  hypothetical protein TMLG_00204 ...   102    4e-20 
gi|15610850|ref|NP_218231.1|  hypothetical protein Rv3714c [Mycob...   102    5e-20 
gi|15843335|ref|NP_338372.1|  hypothetical protein MT3817 [Mycoba...   102    8e-20 
gi|339296524|gb|AEJ48635.1|  hypothetical protein CCDC5079_3446 [...   100    2e-19 


>gi|148823456|ref|YP_001288210.1| hypothetical protein TBFG_12277 [Mycobacterium tuberculosis F11]
 gi|253798684|ref|YP_003031685.1| hypothetical protein TBMG_01732 [Mycobacterium tuberculosis KZN 
1435]
 gi|254365043|ref|ZP_04981089.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 31 more sequence titles
 
gi|297634843|ref|ZP_06952623.1| hypothetical protein MtubK4_12001 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731834|ref|ZP_06960952.1| hypothetical protein MtubKR_12123 [Mycobacterium tuberculosis 
KZN R506]
 gi|306776506|ref|ZP_07414843.1| hypothetical protein TMAG_00441 [Mycobacterium tuberculosis SUMu001]
 gi|306780283|ref|ZP_07418620.1| hypothetical protein TMBG_00799 [Mycobacterium tuberculosis SUMu002]
 gi|306785030|ref|ZP_07423352.1| hypothetical protein TMCG_00348 [Mycobacterium tuberculosis SUMu003]
 gi|306789397|ref|ZP_07427719.1| hypothetical protein TMDG_00730 [Mycobacterium tuberculosis SUMu004]
 gi|306793720|ref|ZP_07432022.1| hypothetical protein TMEG_02619 [Mycobacterium tuberculosis SUMu005]
 gi|306798112|ref|ZP_07436414.1| hypothetical protein TMFG_01214 [Mycobacterium tuberculosis SUMu006]
 gi|306803991|ref|ZP_07440659.1| hypothetical protein TMHG_01442 [Mycobacterium tuberculosis SUMu008]
 gi|306808564|ref|ZP_07445232.1| hypothetical protein TMGG_00810 [Mycobacterium tuberculosis SUMu007]
 gi|306968388|ref|ZP_07481049.1| hypothetical protein TMIG_00919 [Mycobacterium tuberculosis SUMu009]
 gi|306972618|ref|ZP_07485279.1| hypothetical protein TMJG_00514 [Mycobacterium tuberculosis SUMu010]
 gi|307080326|ref|ZP_07489496.1| hypothetical protein TMKG_00514 [Mycobacterium tuberculosis SUMu011]
 gi|307084914|ref|ZP_07494027.1| hypothetical protein TMLG_02740 [Mycobacterium tuberculosis SUMu012]
 gi|313659168|ref|ZP_07816048.1| hypothetical protein MtubKV_12133 [Mycobacterium tuberculosis 
KZN V2475]
 gi|134150557|gb|EBA42602.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148721983|gb|ABR06608.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253320187|gb|ACT24790.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|308215141|gb|EFO74540.1| hypothetical protein TMAG_00441 [Mycobacterium tuberculosis SUMu001]
 gi|308326895|gb|EFP15746.1| hypothetical protein TMBG_00799 [Mycobacterium tuberculosis SUMu002]
 gi|308330247|gb|EFP19098.1| hypothetical protein TMCG_00348 [Mycobacterium tuberculosis SUMu003]
 gi|308334083|gb|EFP22934.1| hypothetical protein TMDG_00730 [Mycobacterium tuberculosis SUMu004]
 gi|308337887|gb|EFP26738.1| hypothetical protein TMEG_02619 [Mycobacterium tuberculosis SUMu005]
 gi|308341649|gb|EFP30500.1| hypothetical protein TMFG_01214 [Mycobacterium tuberculosis SUMu006]
 gi|308345059|gb|EFP33910.1| hypothetical protein TMGG_00810 [Mycobacterium tuberculosis SUMu007]
 gi|308349366|gb|EFP38217.1| hypothetical protein TMHG_01442 [Mycobacterium tuberculosis SUMu008]
 gi|308354075|gb|EFP42926.1| hypothetical protein TMIG_00919 [Mycobacterium tuberculosis SUMu009]
 gi|308358017|gb|EFP46868.1| hypothetical protein TMJG_00514 [Mycobacterium tuberculosis SUMu010]
 gi|308361953|gb|EFP50804.1| hypothetical protein TMKG_00514 [Mycobacterium tuberculosis SUMu011]
 gi|308365526|gb|EFP54377.1| hypothetical protein TMLG_02740 [Mycobacterium tuberculosis SUMu012]
 gi|323719153|gb|EGB28298.1| hypothetical protein TMMG_01533 [Mycobacterium tuberculosis CDC1551A]
Length=295

 Score =  542 bits (1397),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  25   MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  84

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  85   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  145  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT
Sbjct  205  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  264

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  265  IVPIVVDDVRREPGRLAARIARHLDRARMAG  295


>gi|15609385|ref|NP_216764.1| hypothetical protein Rv2248 [Mycobacterium tuberculosis H37Rv]
 gi|15841741|ref|NP_336778.1| hypothetical protein MT2308 [Mycobacterium tuberculosis CDC1551]
 gi|148662069|ref|YP_001283592.1| hypothetical protein MRA_2268 [Mycobacterium tuberculosis H37Ra]
 21 more sequence titles
 
gi|167966628|ref|ZP_02548905.1| hypothetical protein MtubH3_00566 [Mycobacterium tuberculosis 
H37Ra]
 gi|289443758|ref|ZP_06433502.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447880|ref|ZP_06437624.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553964|ref|ZP_06443174.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289574937|ref|ZP_06455164.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289762411|ref|ZP_06521789.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298525740|ref|ZP_07013149.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339632274|ref|YP_004723916.1| hypothetical protein MAF_22590 [Mycobacterium africanum GM041182]
 gi|1722946|sp|Q10526.1|Y2248_MYCTU RecName: Full=Uncharacterized protein Rv2248/MT2308
 gi|1261950|emb|CAA94643.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882000|gb|AAK46592.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|148506221|gb|ABQ74030.1| hypothetical protein MRA_2268 [Mycobacterium tuberculosis H37Ra]
 gi|289416677|gb|EFD13917.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420838|gb|EFD18039.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438596|gb|EFD21089.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289539368|gb|EFD43946.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289709917|gb|EFD73933.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298495534|gb|EFI30828.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|328458448|gb|AEB03871.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339331630|emb|CCC27329.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|344220070|gb|AEN00701.1| hypothetical protein MTCTRI2_2284 [Mycobacterium tuberculosis 
CTRI-2]
Length=271

 Score =  540 bits (1392),  Expect = 7e-152, Method: Compositional matrix adjust.
 Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT
Sbjct  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271


>gi|339295164|gb|AEJ47275.1| hypothetical protein CCDC5079_2085 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298784|gb|AEJ50894.1| hypothetical protein CCDC5180_2057 [Mycobacterium tuberculosis 
CCDC5180]
Length=295

 Score =  539 bits (1389),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 270/271 (99%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  25   MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  84

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  85   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  145  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWR DFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT
Sbjct  205  PLPELQYPIHGHGGEMWRGDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  264

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  265  IVPIVVDDVRREPGRLAARIARHLDRARMAG  295


>gi|340627252|ref|YP_004745704.1| hypothetical protein MCAN_22701 [Mycobacterium canettii CIPT 
140010059]
 gi|340005442|emb|CCC44602.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=271

 Score =  539 bits (1389),  Expect = 2e-151, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 271/271 (100%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESI+WHAGPAEMLRDKTRWAKLQELGWT
Sbjct  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIDWHAGPAEMLRDKTRWAKLQELGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271


>gi|31793428|ref|NP_855921.1| hypothetical protein Mb2272 [Mycobacterium bovis AF2122/97]
 gi|31619020|emb|CAD97125.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length=271

 Score =  539 bits (1388),  Expect = 2e-151, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 271/271 (100%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TL+AALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  121  TLEAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT
Sbjct  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271


>gi|254551293|ref|ZP_05141740.1| hypothetical protein Mtube_12660 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=271

 Score =  538 bits (1386),  Expect = 4e-151, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 270/271 (99%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRL ALDVFMGGHAVACLGTAAALYGFDT
Sbjct  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLPALDVFMGGHAVACLGTAAALYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT
Sbjct  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271


>gi|289758373|ref|ZP_06517751.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289713937|gb|EFD77949.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326903864|gb|EGE50797.1| hypothetical protein TBPG_01749 [Mycobacterium tuberculosis W-148]
Length=271

 Score =  537 bits (1384),  Expect = 6e-151, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 270/271 (99%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQYPIHGHGGEMWR DFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT
Sbjct  181  PLPELQYPIHGHGGEMWRGDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            IVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271


>gi|294993049|ref|ZP_06798740.1| hypothetical protein Mtub2_00710 [Mycobacterium tuberculosis 
210]
Length=261

 Score =  518 bits (1333),  Expect = 5e-145, Method: Compositional matrix adjust.
 Identities = 260/261 (99%), Positives = 260/261 (99%), Gaps = 0/261 (0%)

Query  11   KNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTENTVAIHMLD  70
            KNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTENTVAIHMLD
Sbjct  1    KNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTENTVAIHMLD  60

Query  71   PGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMR  130
            PGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMR
Sbjct  61   PGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMR  120

Query  131  CARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIH  190
            CARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIH
Sbjct  121  CARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIH  180

Query  191  GHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVR  250
            GHGGEMWR DFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVR
Sbjct  181  GHGGEMWRGDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVR  240

Query  251  REPGRLAARIARHLDRARMAG  271
            REPGRLAARIARHLDRARMAG
Sbjct  241  REPGRLAARIARHLDRARMAG  261


>gi|240170083|ref|ZP_04748742.1| hypothetical protein MkanA1_12271 [Mycobacterium kansasii ATCC 
12478]
Length=271

 Score =  472 bits (1214),  Expect = 3e-131, Method: Compositional matrix adjust.
 Identities = 232/271 (86%), Positives = 249/271 (92%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQV NGGLVRVWYGVY+A+ PDLLGRLAALDVFMG  AVACLGTAAALYGFDT
Sbjct  1    MTRQQLDVQVNNGGLVRVWYGVYSARTPDLLGRLAALDVFMGRRAVACLGTAAALYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENT AIH+LDPGVRMRPTVGLMVHQR GARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  61   ENTTAIHVLDPGVRMRPTVGLMVHQRTGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRS RC RSEIE+AV EQRGRRGIVA R+LLPFAD RAESAMESE RLV+ DHGL
Sbjct  121  TLDAALRSTRCTRSEIESAVIEQRGRRGIVAVRDLLPFADQRAESAMESEVRLVINDHGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P+PELQYPI+G  GE+WRVDFAWP+MRLAAEYES+EWH G +EMLRDK+RWAK+QELGWT
Sbjct  181  PVPELQYPIYGPDGELWRVDFAWPEMRLAAEYESVEWHVGRSEMLRDKSRWAKIQELGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            I+PIVV DVR+EP RLA RIA HL+R RMAG
Sbjct  241  IIPIVVSDVRQEPYRLAQRIASHLNRTRMAG  271


>gi|254551294|ref|ZP_05141741.1| hypothetical protein Mtube_12665 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=231

 Score =  459 bits (1182),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  41   MGGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLAT  100
            MGGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLAT
Sbjct  1    MGGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLAT  60

Query  101  APAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFAD  160
            APAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFAD
Sbjct  61   APAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFAD  120

Query  161  GRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAG  220
            GRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAG
Sbjct  121  GRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAG  180

Query  221  PAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            PAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  181  PAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG  231


>gi|289754356|ref|ZP_06513734.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289694943|gb|EFD62372.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=283

 Score =  457 bits (1176),  Expect = 8e-127, Method: Compositional matrix adjust.
 Identities = 229/238 (97%), Positives = 229/238 (97%), Gaps = 0/238 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT
Sbjct  46   MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  105

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA
Sbjct  106  ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  165

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL
Sbjct  166  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  225

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELG  238
            PLPELQYPIHGHGGEMWRVDFAWPDMRL         HAGPAEMLRDKTRWAKLQELG
Sbjct  226  PLPELQYPIHGHGGEMWRVDFAWPDMRLRGRIRKHRVHAGPAEMLRDKTRWAKLQELG  283


>gi|121638131|ref|YP_978355.1| hypothetical protein BCG_2266 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990625|ref|YP_002645312.1| hypothetical protein JTY_2260 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121493779|emb|CAL72254.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773738|dbj|BAH26544.1| hypothetical protein JTY_2260 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602169|emb|CCC64843.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=234

 Score =  457 bits (1175),  Expect = 9e-127, Method: Compositional matrix adjust.
 Identities = 230/230 (100%), Positives = 230/230 (100%), Gaps = 0/230 (0%)

Query  42   GGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATA  101
            GGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATA
Sbjct  5    GGHAVACLGTAAALYGFDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATA  64

Query  102  PAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADG  161
            PAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADG
Sbjct  65   PAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADG  124

Query  162  RAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGP  221
            RAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGP
Sbjct  125  RAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGP  184

Query  222  AEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            AEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG
Sbjct  185  AEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARMAG  234


>gi|296166139|ref|ZP_06848584.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898548|gb|EFG78109.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=294

 Score =  453 bits (1165),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 225/271 (84%), Positives = 241/271 (89%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDVQV+NGGLVRVW+GVY A +PDLLGRLAALDVFMG HAVAC+GTAA LYGFDT
Sbjct  24   MTRQQLDVQVRNGGLVRVWHGVYGAAQPDLLGRLAALDVFMGRHAVACMGTAATLYGFDT  83

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            EN+ AIH+LDPGVRMRPTVGLMVHQR GARLQR+ GRLATAPAWTAVEVARQLRRPR LA
Sbjct  84   ENSTAIHVLDPGVRMRPTVGLMVHQRTGARLQRIGGRLATAPAWTAVEVARQLRRPRTLA  143

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSM C R+EI  AV EQRGRRGIVA R LLP ADGRAESAMESEARLVM+D GL
Sbjct  144  TLDAALRSMWCTRNEIGQAVEEQRGRRGIVAVRALLPLADGRAESAMESEARLVMLDRGL  203

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            PLPELQ+PI G  GE+WRVDFAWP MRLAAEYESI+WH G  EMLRDK+RWAK+QELGWT
Sbjct  204  PLPELQHPIVGRDGELWRVDFAWPHMRLAAEYESIDWHVGRMEMLRDKSRWAKIQELGWT  263

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            I+PIVVDDVRREP RLA RIA HL+R  MA 
Sbjct  264  IIPIVVDDVRREPDRLADRIATHLNRPPMAS  294


>gi|183983331|ref|YP_001851622.1| hypothetical protein MMAR_3341 [Mycobacterium marinum M]
 gi|183176657|gb|ACC41767.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=295

 Score =  444 bits (1142),  Expect = 7e-123, Method: Compositional matrix adjust.
 Identities = 219/271 (81%), Positives = 240/271 (89%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLDV+V+NG LVRVW+GVYAA+EP+LLGRL ALDVFMG   VAC+GTAA LYGFDT
Sbjct  25   MTRQQLDVRVRNGSLVRVWHGVYAAEEPNLLGRLTALDVFMGRPVVACMGTAATLYGFDT  84

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E + A+H+LDPGVRMRPTVGLMVHQR+GARLQRV+GRLATAPAWTAVEVAR LRRPRALA
Sbjct  85   ECSSAVHVLDPGVRMRPTVGLMVHQRIGARLQRVAGRLATAPAWTAVEVARALRRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSM+C R +IE+AVAEQ GRRGIVA RELLP AD RAESAMESE RLVMID GL
Sbjct  145  TLDAALRSMQCTRDQIESAVAEQHGRRGIVAVRELLPLADPRAESAMESETRLVMIDGGL  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
              PELQY IHG  GE+WRVDFAWPD+RLAAEY+SI+WHAG  EMLRDKTRWAK+Q+LGWT
Sbjct  205  ARPELQYLIHGSDGELWRVDFAWPDLRLAAEYDSIDWHAGRVEMLRDKTRWAKIQDLGWT  264

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            I+PIVVDDVRREPGRL  RI  HLDR R A 
Sbjct  265  IIPIVVDDVRREPGRLVQRIGNHLDRLRAAS  295


>gi|118617000|ref|YP_905332.1| hypothetical protein MUL_1301 [Mycobacterium ulcerans Agy99]
 gi|118569110|gb|ABL03861.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=271

 Score =  433 bits (1114),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 214/271 (79%), Positives = 237/271 (88%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MT QQLDV+V+NG LVRVW+GVYAA+EP+LLGRL ALDVFMG   VAC+GTAA LYGFDT
Sbjct  1    MTGQQLDVRVRNGSLVRVWHGVYAAEEPNLLGRLTALDVFMGRPVVACMGTAATLYGFDT  60

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E + A+H+LDPGVRMRPT+GLMVHQR+GARLQRV+G+LATAP WTA EVAR LRRPRALA
Sbjct  61   ECSSAVHVLDPGVRMRPTIGLMVHQRIGARLQRVAGQLATAPPWTAAEVARALRRPRALA  120

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRSM+C R +IE+AVAEQ GRRGIVA RELLP AD RAESAMESE RLVMID GL
Sbjct  121  TLDAALRSMQCTRDQIESAVAEQHGRRGIVAVRELLPLADPRAESAMESETRLVMIDGGL  180

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
              PELQY IHG  GE+WRVDFAWPD+RLAAEY+SI+WHAG  EMLRDKTRWAK+Q+LGWT
Sbjct  181  ARPELQYLIHGSDGELWRVDFAWPDLRLAAEYDSIDWHAGRVEMLRDKTRWAKIQDLGWT  240

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            I+PIVVDDVRREPGRL  RI  HLDR R A 
Sbjct  241  IIPIVVDDVRREPGRLVQRIGNHLDRLRAAS  271


>gi|108798140|ref|YP_638337.1| hypothetical protein Mmcs_1169 [Mycobacterium sp. MCS]
 gi|119867236|ref|YP_937188.1| hypothetical protein Mkms_1186 [Mycobacterium sp. KMS]
 gi|108768559|gb|ABG07281.1| hypothetical protein Mmcs_1169 [Mycobacterium sp. MCS]
 gi|119693325|gb|ABL90398.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=320

 Score =  391 bits (1004),  Expect = 7e-107, Method: Compositional matrix adjust.
 Identities = 193/271 (72%), Positives = 223/271 (83%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLD  V+ G LVRVWYGVYA  +PD+ GRL+ALD+F+G  AVACLGTAA LYGFD 
Sbjct  50   MTRQQLDWHVRRGDLVRVWYGVYADHQPDVRGRLSALDLFLGEEAVACLGTAAVLYGFDV  109

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENT AIHMLDPG R+RPT+GL VHQR+GA LQRV+GRLATAPAWTAVE AR+L RPRALA
Sbjct  110  ENTAAIHMLDPGRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETARRLPRPRALA  169

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAA+ S  C   +++ AV  Q GRRGIV+ RELLP  DGRAESAMESEARLVMID+GL
Sbjct  170  TLDAAVHSTWCDTGDLQGAVDAQAGRRGIVSVRELLPHVDGRAESAMESEARLVMIDYGL  229

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P PELQY I G GG +WRVDFAWPD R+ AEYES++WH GP EM+RD+TR A +QE GWT
Sbjct  230  PKPELQYEIRGPGGVVWRVDFAWPDRRVVAEYESVDWHVGPREMIRDRTRLAGIQESGWT  289

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            ++P+VVDD+RR P RLA RIA HL + R+AG
Sbjct  290  VIPMVVDDIRRHPARLAQRIAHHLSQPRLAG  320


>gi|126433799|ref|YP_001069490.1| hypothetical protein Mjls_1196 [Mycobacterium sp. JLS]
 gi|126233599|gb|ABN96999.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=320

 Score =  372 bits (954),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 191/271 (71%), Positives = 221/271 (82%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            MTRQQLD  V+ G LVRVWYGVYA  +PD+ GRL+ALD+F+G  AVACLGTAAALYGFD 
Sbjct  50   MTRQQLDWHVRRGDLVRVWYGVYADHQPDVRGRLSALDLFLGEEAVACLGTAAALYGFDV  109

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            ENT AIH+LDPG R+RPT+GL VHQR+GA LQRV+GRLATAPAWTAVE AR+L RPRALA
Sbjct  110  ENTAAIHILDPGRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETARRLPRPRALA  169

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAA+ S  C   +++ AV  Q GRRGIVA RELLP  DGRAESAMESEARLVMID+GL
Sbjct  170  TLDAAVHSTWCDTGDLQGAVDAQAGRRGIVAVRELLPHVDGRAESAMESEARLVMIDYGL  229

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P PELQY I G GG +WRVD AWPD R+ AEYES++WH G  EM+RD+ R A +QE GWT
Sbjct  230  PKPELQYEIRGPGGVVWRVDLAWPDQRVVAEYESVDWHVGRREMVRDRRRLAGIQESGWT  289

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            ++P++VDD+RR P RLA RIA HL R R+AG
Sbjct  290  VIPMIVDDIRRHPARLAQRIAHHLSRPRLAG  320


>gi|120406404|ref|YP_956233.1| hypothetical protein Mvan_5457 [Mycobacterium vanbaalenii PYR-1]
 gi|119959222|gb|ABM16227.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=301

 Score =  362 bits (929),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 184/267 (69%), Positives = 211/267 (80%), Gaps = 1/267 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            M+RQQLDV+V+ G L+RVW+GVYAA EPD LGRL ALD ++G  AVAC+GTAA LYGFD 
Sbjct  25   MSRQQLDVRVRKGELIRVWHGVYAATEPDYLGRLQALDSYIGQPAVACMGTAAVLYGFDN  84

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E T A+H+LDPGVR+RPTVGLMVHQRVGA L RV GRLAT+PAWTAVEVAR L RPRALA
Sbjct  85   EATSAVHILDPGVRVRPTVGLMVHQRVGAPLGRVRGRLATSPAWTAVEVARTLHRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALR+  C   E+  AV EQRGRRGIVA RELLP AD RAES MESEARL M D+G+
Sbjct  145  TLDAALRTGLCTPVELHAAVTEQRGRRGIVAVRELLPLADARAESPMESEARLAMHDYGV  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P PELQY +HG   + WRVDFAWP++ +AAEYES++WH G   ML+DK R+A LQ   WT
Sbjct  205  PRPELQYVVHG-AWDSWRVDFAWPEVLVAAEYESVDWHTGRDAMLKDKARFAGLQHAAWT  263

Query  241  IVPIVVDDVRREPGRLAARIARHLDRA  267
            ++PI V DVR  P RLA RI  HL RA
Sbjct  264  VIPITVTDVRISPERLAERIKEHLWRA  290


>gi|145221927|ref|YP_001132605.1| hypothetical protein Mflv_1335 [Mycobacterium gilvum PYR-GCK]
 gi|145214413|gb|ABP43817.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=293

 Score =  350 bits (899),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 182/267 (69%), Positives = 206/267 (78%), Gaps = 0/267 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            M+RQQLD  V+   LVRVW+GVYA  +PD  GRL +LD F+G HAVACLGTAA+LYGFDT
Sbjct  25   MSRQQLDGLVRRRELVRVWHGVYAVAQPDSRGRLNSLDAFLGQHAVACLGTAASLYGFDT  84

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E T  +H+LDPG R+RP  GLMVHQRVGA L+RV GRLATAPAWTAVEVAR L RPRALA
Sbjct  85   EATETVHILDPGARVRPVDGLMVHQRVGAPLRRVDGRLATAPAWTAVEVARVLPRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAAL S  C   E+  A  EQRGRRGIV  RELL  ADGRAES MESEARLVM DH L
Sbjct  145  TLDAALHSGLCTAVELGAAAHEQRGRRGIVKVRELLAIADGRAESPMESEARLVMHDHDL  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P PELQY I G   +MWRVDFAWP+  +AAEY+S++WH+G   MLRD+ R+A +Q   WT
Sbjct  205  PRPELQYVIDGTHDDMWRVDFAWPEHHVAAEYDSMDWHSGRVAMLRDRARYAGIQHARWT  264

Query  241  IVPIVVDDVRREPGRLAARIARHLDRA  267
            ++PIVV DVR  P RLAARIA HL RA
Sbjct  265  VIPIVVTDVRVHPARLAARIADHLLRA  291


>gi|315446336|ref|YP_004079215.1| hypothetical protein Mspyr1_48430 [Mycobacterium sp. Spyr1]
 gi|315264639|gb|ADU01381.1| hypothetical protein Mspyr1_48430 [Mycobacterium sp. Spyr1]
Length=293

 Score =  346 bits (888),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 180/267 (68%), Positives = 204/267 (77%), Gaps = 0/267 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            M+RQQLD  V+   LVRVW+GVYA  +PD  GRL +LD F+G HAVACLGTAA+LYGFDT
Sbjct  25   MSRQQLDGLVRRRELVRVWHGVYAVAQPDSRGRLNSLDAFLGQHAVACLGTAASLYGFDT  84

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E T  +H+LDPG R+RP  GLMVHQRVGA L+RV GRLATAPAWTAVEVAR L RPRALA
Sbjct  85   EATETVHILDPGARVRPVDGLMVHQRVGAPLRRVDGRLATAPAWTAVEVARVLPRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAAL S  C   E+  A  EQRGRRGIV  RELL  ADGRAES MESEARLVM DH L
Sbjct  145  TLDAALHSGLCTAVELGAAAREQRGRRGIVKVRELLAIADGRAESPMESEARLVMHDHDL  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P PELQY I G   + WRVDFAWP+  +AAEY+S++WH+G   MLRD+ R+A +Q   W 
Sbjct  205  PRPELQYVIDGTHDDAWRVDFAWPEHHVAAEYDSMDWHSGRVAMLRDRARYAGIQHARWA  264

Query  241  IVPIVVDDVRREPGRLAARIARHLDRA  267
            ++PIVV DVR  P RLAARIA HL RA
Sbjct  265  VIPIVVTDVRVHPARLAARIADHLLRA  291


>gi|108797945|ref|YP_638142.1| hypothetical protein Mmcs_0971 [Mycobacterium sp. MCS]
 gi|119867041|ref|YP_936993.1| hypothetical protein Mkms_0989 [Mycobacterium sp. KMS]
 gi|126433607|ref|YP_001069298.1| hypothetical protein Mjls_0999 [Mycobacterium sp. JLS]
 gi|108768364|gb|ABG07086.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119693130|gb|ABL90203.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126233407|gb|ABN96807.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=320

 Score =  324 bits (830),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 166/271 (62%), Positives = 201/271 (75%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            M+R+ L   ++ G +VRVW+GVY+   PD   RLAALDV +G   VACL TAA L+GF T
Sbjct  50   MSRKTLAGHLRAGVIVRVWHGVYSLGPPDTARRLAALDVLVGRPVVACLHTAADLHGFRT  109

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E    +H+LDPGVRMRPTVGLMVHQRVGA L+RV+GRL TAPAWTAVE+AR L RPRALA
Sbjct  110  EGPGPVHILDPGVRMRPTVGLMVHQRVGAPLRRVAGRLVTAPAWTAVEIARTLNRPRALA  169

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAAL    CA +++  AV EQ+GRRGIV  REL+ + DGR+ES MESE RLV ID GL
Sbjct  170  TLDAALHVGACAPADLVRAVDEQKGRRGIVKVRELVAYVDGRSESPMESETRLVFIDGGL  229

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P PE+Q+ I    G++WR DFAWP  ++ AEYES+EWHA    +  D+ + A+LQE GWT
Sbjct  230  PRPEVQFEIVDRCGQLWRADFAWPAAKVVAEYESMEWHANAVALRHDRMKTARLQECGWT  289

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
            ++PIVVDDVR  P  L A IA HL+RA MAG
Sbjct  290  VIPIVVDDVRHHPLDLVAGIATHLERADMAG  320


>gi|254774257|ref|ZP_05215773.1| hypothetical protein MaviaA2_06250 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=293

 Score =  303 bits (775),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 158/271 (59%), Positives = 192/271 (71%), Gaps = 0/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            ++R+QL   VK+G L+RV +GVYA   PD+   L A  + +G   VAC+GTAAALYGFDT
Sbjct  23   VSRKQLAGLVKSGMLIRVCHGVYAPNVPDVSNALDAAQLRVGRPVVACMGTAAALYGFDT  82

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E T  IH+LDPG+RMRP+  +MVHQR+ A L+RV G LAT PAWTA+EVAR LR  RALA
Sbjct  83   ERTTRIHVLDPGIRMRPSPKIMVHQRIRAPLRRVKGHLATTPAWTAIEVARALRPARALA  142

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALR   C  +E++ A  EQ GRRGIV  RELL +ADGRAES MESEARL+ I  GL
Sbjct  143  TLDAALRVGACTAAELDAAAREQHGRRGIVKVRELLAYADGRAESPMESEARLLFIGSGL  202

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P+PELQY I    G  WR DFAWP   + AEY+S+EWH     +L D+ + A+LQE GWT
Sbjct  203  PMPELQYSITDRHGRRWRADFAWPASMVLAEYDSVEWHLDREALLHDRLKLARLQECGWT  262

Query  241  IVPIVVDDVRREPGRLAARIARHLDRARMAG  271
             VP+ VDD+R +P  L ARI  HL   R+AG
Sbjct  263  TVPMTVDDIRHDPVGLIARINGHLAAPRVAG  293


>gi|296168880|ref|ZP_06850551.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896446|gb|EFG76097.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=317

 Score =  288 bits (738),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 152/268 (57%), Positives = 189/268 (71%), Gaps = 1/268 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            +TR+ L+  V    L +VW+G+Y         +L  LD+  G    AC+GTAAA+YGFDT
Sbjct  49   VTRRGLEAHVNADALQKVWHGIYGRGRLTTALQLRGLDLATGTSVAACMGTAAAVYGFDT  108

Query  61   ENTVAIHMLDP-GVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRAL  119
            E T  +H+L+P G R+R   GL+VH+R GA L  V+GRLATAPAWTA+EVAR LRRPRAL
Sbjct  109  EATTGLHVLEPDGRRLRSADGLVVHRREGAPLTMVAGRLATAPAWTAIEVARGLRRPRAL  168

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
            ATLDAALRS RC+R E+   +A Q GRRG+V  RELLP A   AES MESEARLVMID G
Sbjct  169  ATLDAALRSGRCSRDEMRRMLALQSGRRGVVNIRELLPLASPLAESPMESEARLVMIDGG  228

Query  180  LPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGW  239
            LP P LQY +    G +WR+DFAWP+ R+AAEY+ ++WH+GPA  LRD+ R + LQ+LGW
Sbjct  229  LPEPVLQYEVVDLEGNVWRLDFAWPEDRVAAEYDGVDWHSGPAAFLRDRRRVSALQQLGW  288

Query  240  TIVPIVVDDVRREPGRLAARIARHLDRA  267
             IVPIV +DVR  P  L  R+  +L RA
Sbjct  289  LIVPIVAEDVRYRPRELVGRLETYLRRA  316


>gi|333990211|ref|YP_004522825.1| hypothetical protein JDM601_1571 [Mycobacterium sp. JDM601]
 gi|333486179|gb|AEF35571.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=295

 Score =  286 bits (731),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 148/271 (55%), Positives = 188/271 (70%), Gaps = 1/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            + R   +  V  G L +VW+GVY+  +PD   RLA LD+  G     CLGTAAA YGFDT
Sbjct  25   LGRAAFETGVARGELTQVWFGVYSRSDPDTTLRLAGLDLRAGEQVAVCLGTAAAAYGFDT  84

Query  61   ENTVAIHMLDP-GVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRAL  119
            E    +H+L+P G ++R + GL+VH+R  A L  V GRLAT PAWTAVEVAR LRRPRAL
Sbjct  85   EEVTDLHVLNPVGHQLRNSDGLVVHRRDAAPLAFVDGRLATEPAWTAVEVARSLRRPRAL  144

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
            ATLDAALRS  C R ++ +A A Q GRRGIVA R+L+P ADGR++SAMESEARL MID G
Sbjct  145  ATLDAALRSGTCDRRQLRSAAARQGGRRGIVAVRDLMPLADGRSDSAMESEARLRMIDGG  204

Query  180  LPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGW  239
            LP+PELQY I     ++W VDFAWP  R+A EY+  ++H+ P  + RD+ + A LQE+GW
Sbjct  205  LPVPELQYKIVDRNFQIWTVDFAWPAYRVAVEYDGFDFHSSPEALRRDRRKRAALQEVGW  264

Query  240  TIVPIVVDDVRREPGRLAARIARHLDRARMA  270
            T++ +V DDVRR P  +  RI   + R+R A
Sbjct  265  TVLSLVDDDVRRRPWDMVRRIEGEMSRSRAA  295


>gi|120404775|ref|YP_954604.1| hypothetical protein Mvan_3817 [Mycobacterium vanbaalenii PYR-1]
 gi|119957593|gb|ABM14598.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=294

 Score =  269 bits (687),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 141/266 (54%), Positives = 179/266 (68%), Gaps = 1/266 (0%)

Query  2    TRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTE  61
            +R +LD+++++G L++VW GVY+  EPD + RL  LD+  G     CLGTAAA YGFDTE
Sbjct  25   SRSRLDIEIRDGWLIKVWPGVYSRDEPDTMTRLRGLDLRAGEPVAICLGTAAAAYGFDTE  84

Query  62   NTVAIHMLDPGV-RMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            +T  IH L+P   ++R + GL+VH+R GA L    GR AT  AWTAVEVAR LRRPRALA
Sbjct  85   DTHDIHALNPPRHQLRNSDGLIVHRRDGAPLGVADGRPATTAAWTAVEVARSLRRPRALA  144

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALRS  C R ++  A AEQ GRRGIVA REL+P AD  AES MESEARL M+D GL
Sbjct  145  TLDAALRSTSCTRQQLTVAAAEQAGRRGIVAVRELIPLADALAESPMESEARLAMLDGGL  204

Query  181  PLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWT  240
            P P LQ+ I    G  WRVDFAW D ++A EY+  +WH+      RD+ + A L E+ W 
Sbjct  205  PPPVLQHEIVDLSGRTWRVDFAWLDAKVAVEYDGFDWHSDQEHFARDRQKRAALNEVNWR  264

Query  241  IVPIVVDDVRREPGRLAARIARHLDR  266
            ++ +V DDVR++   +  RI   L R
Sbjct  265  MLSVVSDDVRKQSHDMVRRIEHELTR  290


>gi|118618130|ref|YP_906462.1| hypothetical protein MUL_2670 [Mycobacterium ulcerans Agy99]
 gi|118570240|gb|ABL04991.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=281

 Score =  265 bits (677),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 149/261 (58%), Positives = 182/261 (70%), Gaps = 1/261 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            +TR+ L+  +KNG L RVW+G+Y   E     RL  +D+ +G    ACLGTAAA YGFDT
Sbjct  11   LTRRGLEADLKNGVLSRVWHGIYGRGELTSGLRLRGVDLAVGTPVAACLGTAAAAYGFDT  70

Query  61   ENTVAIHMLDP-GVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRAL  119
            E T  +H+L+P G ++R T GL VH+R GA L R++GR    PAWTA+EVAR LRRPRAL
Sbjct  71   EQTGDLHVLNPEGRQLRSTDGLTVHRRAGAPLTRLAGRELRTPAWTAIEVARGLRRPRAL  130

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
            ATLDAALRS  C R +++ AV  Q GRRG+VA RELL  A   AES MESE RLVMI+ G
Sbjct  131  ATLDAALRSGTCDRDDLDRAVCLQSGRRGVVAVRELLALASPLAESPMESETRLVMIEGG  190

Query  180  LPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGW  239
            LP P LQY + G  G  WR+DFAWP +R+AAEY+ ++WH+GP   LRD+ R A LQELGW
Sbjct  191  LPAPVLQYELVGSDGRRWRLDFAWPGLRVAAEYDGVDWHSGPQAFLRDRRRSAALQELGW  250

Query  240  TIVPIVVDDVRREPGRLAARI  260
             IVPIV  DVR  P  L  R+
Sbjct  251  VIVPIVAGDVRHRPAELVQRL  271


>gi|183981244|ref|YP_001849535.1| hypothetical protein MMAR_1222 [Mycobacterium marinum M]
 gi|183174570|gb|ACC39680.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=295

 Score =  265 bits (676),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 149/261 (58%), Positives = 183/261 (71%), Gaps = 1/261 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            +TR+ L+  +K+G L RVW+G+Y   E     RL  +D+ +G    ACLGTAAA YGFDT
Sbjct  25   LTRRGLEADLKSGVLSRVWHGIYGRGELTSGLRLRGVDLAVGTPVAACLGTAAAAYGFDT  84

Query  61   ENTVAIHMLDP-GVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRAL  119
            E T  +H+L+P G ++R T GL VH+R GA L R++GR  T PAWTA+EVAR LRRPRAL
Sbjct  85   EQTGDLHVLNPEGRQLRSTDGLTVHRRAGAPLTRLAGRELTTPAWTAIEVARGLRRPRAL  144

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
            ATLDAALRS  C R +++ AV  Q GRRG+VA RELL  A   AES MESE RLVMI+ G
Sbjct  145  ATLDAALRSGTCDRDDLDRAVCLQSGRRGVVAVRELLALASPLAESPMESETRLVMIEGG  204

Query  180  LPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGW  239
            LP P LQY + G  G  WR+DFAWP +R+AAEY+ ++WH+GP   LRD+ R A LQELGW
Sbjct  205  LPAPVLQYELVGSDGRRWRLDFAWPGLRVAAEYDGVDWHSGPQAFLRDRRRSAALQELGW  264

Query  240  TIVPIVVDDVRREPGRLAARI  260
             IVPIV  DVR  P  L  R+
Sbjct  265  VIVPIVAGDVRHRPADLVQRL  285


>gi|169630696|ref|YP_001704345.1| hypothetical protein MAB_3617 [Mycobacterium abscessus ATCC 19977]
 gi|169242663|emb|CAM63691.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=293

 Score =  264 bits (675),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 137/265 (52%), Positives = 177/265 (67%), Gaps = 1/265 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            ++ +++   +++G L R W+GVY    P +  +L ALD+    H   C+GTAAA YGFDT
Sbjct  24   LSAKRISSLIRDGHLHRPWHGVYTLPNPTVEIQLRALDLVADAHVPVCMGTAAASYGFDT  83

Query  61   ENTVAIHMLDP-GVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRAL  119
            E   A+H+++P   ++RP   L+VHQR+GA L+ V GRL TAP WTA+E+AR LR  RA+
Sbjct  84   ERDGALHVINPVPGQLRPRPNLVVHQRLGAPLRYVDGRLTTAPDWTAIEIARTLRPSRAI  143

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
             TLDAALRS  C+   + +A   Q GRRGIV  R LL  ADGR+ES MESE RL+ ID G
Sbjct  144  GTLDAALRSGHCSPGGLRHAARMQAGRRGIVHVRGLLTHADGRSESPMESETRLLFIDSG  203

Query  180  LPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGW  239
            +P PELQ  I    G +WRVDF W   RL  EY+S EWH+GPA M +DK + A+LQE GW
Sbjct  204  VPAPELQATICDRYGTVWRVDFLWRSARLIGEYDSDEWHSGPAAMRKDKLKTARLQECGW  263

Query  240  TIVPIVVDDVRREPGRLAARIARHL  264
            T++PI VDD+RR    L ARI  HL
Sbjct  264  TVIPITVDDIRRHRDELVARINTHL  288


>gi|315445750|ref|YP_004078629.1| hypothetical protein Mspyr1_42340 [Mycobacterium sp. Spyr1]
 gi|315264053|gb|ADU00795.1| hypothetical protein Mspyr1_42340 [Mycobacterium sp. Spyr1]
Length=295

 Score =  258 bits (660),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 140/271 (52%), Positives = 181/271 (67%), Gaps = 1/271 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            + R++ +  +  G L R+W GVY   E D   RLA LD+  G     CLGTAAA++GFDT
Sbjct  25   VPRRRFEQWLNTGVLERIWQGVYCLGEADDALRLAGLDLSSGRRVAVCLGTAAAIFGFDT  84

Query  61   ENTVAIHMLDP-GVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRAL  119
            E    +H+L+P G  +R   GL+VH+R GA L  V GR AT+PAWTA+EVAR LRRPRAL
Sbjct  85   EQPRDLHVLNPPGCALRDADGLVVHRRDGAPLVTVEGRRATSPAWTAIEVARSLRRPRAL  144

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
            ATLDAALRS  C R ++  A  EQ+GRRGIVA R LLP AD RAES  ES ARL M+D  
Sbjct  145  ATLDAALRSGTCTRPDLWRAAIEQKGRRGIVAVRNLLPLADARAESPGESAARLAMLDAD  204

Query  180  LPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGW  239
            LP+P LQY      G++ R+DFAWP+  +AAEY+ ++WH+GP  M RD+ R++ L  +G 
Sbjct  205  LPVPHLQYEFVDGNGDLRRLDFAWPEAGVAAEYDGVDWHSGPDAMQRDRRRYSALLAVGM  264

Query  240  TIVPIVVDDVRREPGRLAARIARHLDRARMA  270
             ++PIV +D+R     +A+RI   L RAR A
Sbjct  265  VVIPIVAEDLRDGGWEMASRIRDQLLRARAA  295


>gi|145225402|ref|YP_001136080.1| hypothetical protein Mflv_4824 [Mycobacterium gilvum PYR-GCK]
 gi|145217888|gb|ABP47292.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=295

 Score =  256 bits (655),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 138/257 (54%), Positives = 174/257 (68%), Gaps = 1/257 (0%)

Query  15   LVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTENTVAIHMLDP-GV  73
            L R+W GVY   E D   RLA LD+  G     CLGTAAA++GFDTE    +H+L+P G 
Sbjct  39   LERIWQGVYCLGEADDALRLAGLDLSSGRRVAVCLGTAAAIFGFDTEQPRDLHVLNPPGC  98

Query  74   RMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMRCAR  133
             +R   GL+VH+R GA L  V GR AT+PAWTA+EVAR LRRPRALATLDAALRS  C R
Sbjct  99   ALRDADGLVVHRRDGAPLVTVEGRRATSPAWTAIEVARSLRRPRALATLDAALRSGTCTR  158

Query  134  SEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHG  193
             ++  A  EQ+GRRGIVA R LLP AD RAES  ES ARL M+D  LP+P LQY      
Sbjct  159  PDLWRAATEQKGRRGIVAVRNLLPLADARAESPGESAARLAMLDADLPVPHLQYEFVDGN  218

Query  194  GEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREP  253
            G++ R+DFAWP+  +AAEY+ ++WH+GP  M RD+ R++ L  +G  ++PIV +D+R   
Sbjct  219  GDLRRLDFAWPEAGVAAEYDGVDWHSGPDAMQRDRRRYSALLAVGMVVIPIVAEDLRDGG  278

Query  254  GRLAARIARHLDRARMA  270
              +A+RI   L RAR A
Sbjct  279  WEMASRIRDQLRRARAA  295


>gi|333991768|ref|YP_004524382.1| hypothetical protein JDM601_3128 [Mycobacterium sp. JDM601]
 gi|333487736|gb|AEF37128.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=243

 Score =  256 bits (654),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 136/235 (58%), Positives = 163/235 (70%), Gaps = 1/235 (0%)

Query  34   LAALDVFMGGHAVACLGTAAALYGFDTENTVAIHMLDPGVR-MRPTVGLMVHQRVGARLQ  92
            L  LD+  G     CLGTAAA YGFDTE  V +H+L+P  R +R   GL+VH+R GA L 
Sbjct  7    LRGLDLATGTTVAVCLGTAAAAYGFDTEEPVELHVLNPPRRQLRSADGLVVHRREGAPLS  66

Query  93   RVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAA  152
             V+GR ATAPAWTA+EVAR LRRPRALATLDAALRS  C+R E+  A   Q GRRGIVA 
Sbjct  67   TVAGRPATAPAWTAIEVARTLRRPRALATLDAALRSGTCSRRELWRAAVRQAGRRGIVAV  126

Query  153  RELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEY  212
            R+LLP AD  A S MESE+RL+MID GLP P LQY I       WRVDFAWP+ R+A EY
Sbjct  127  RDLLPLADPLAGSEMESESRLMMIDAGLPRPVLQYEIVDRNNRTWRVDFAWPEQRVAVEY  186

Query  213  ESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRA  267
            + + WH GP   + ++ R A LQELGW ++PI+ +DVRR+P +   RI  HL RA
Sbjct  187  DGVVWHEGPDAFVYERQRRAALQELGWVVIPIIAEDVRRQPWQAVRRIETHLARA  241


>gi|41408641|ref|NP_961477.1| hypothetical protein MAP2543 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396999|gb|AAS04860.1| hypothetical protein MAP_2543 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=236

 Score =  244 bits (622),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 127/204 (63%), Positives = 150/204 (74%), Gaps = 0/204 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            ++R+QL   VK+G L+RV +GVYA   PD+   L A  + +G   VAC+GTAAALYGFDT
Sbjct  11   VSRKQLAGLVKSGMLIRVCHGVYAPNVPDVSDALDAAQLRVGRPVVACMGTAAALYGFDT  70

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E T  IH+LDPG+RMRP+  +MVHQR+GA L+RV G LAT PAWTA+EVAR LR  RALA
Sbjct  71   ERTTRIHVLDPGIRMRPSPKIMVHQRIGAPLRRVKGHLATMPAWTAIEVARALRPARALA  130

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALR   C  +E++ A  EQ GRRGIV  RELL +ADGRAES MESEARL+ I  GL
Sbjct  131  TLDAALRVGACTAAELDAAAREQHGRRGIVKVRELLAYADGRAESPMESEARLLFIGSGL  190

Query  181  PLPELQYPIHGHGGEMWRVDFAWP  204
            P+PELQY I    G  WR DFAWP
Sbjct  191  PMPELQYSITDRHGRRWRADFAWP  214


>gi|336458571|gb|EGO37538.1| hypothetical protein MAPs_11610 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=248

 Score =  242 bits (618),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 126/204 (62%), Positives = 149/204 (74%), Gaps = 0/204 (0%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            ++R+QL   VK+G L+RV +GVYA   PD+   L A  + +G   VAC+GTAAALYGFDT
Sbjct  23   VSRKQLAGLVKSGMLIRVCHGVYAPNVPDVSDALDAAQLRVGRPVVACMGTAAALYGFDT  82

Query  61   ENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALA  120
            E T  IH+LDPG+RMRP+  +MVHQR+G  L+RV G LAT PAWTA+EVAR LR  RALA
Sbjct  83   ERTTRIHVLDPGIRMRPSPKIMVHQRIGVPLRRVKGHLATMPAWTAIEVARALRPARALA  142

Query  121  TLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGL  180
            TLDAALR   C  +E++ A  EQ GRRGIV  RELL +ADGRAES MESEARL+ I  GL
Sbjct  143  TLDAALRVGACTAAELDAAAREQHGRRGIVKVRELLAYADGRAESPMESEARLLFIGSGL  202

Query  181  PLPELQYPIHGHGGEMWRVDFAWP  204
            P+PELQY I    G  WR DFAWP
Sbjct  203  PMPELQYSITDRHGRRWRADFAWP  226


>gi|118471877|ref|YP_886105.1| hypothetical protein MSMEG_1733 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118173164|gb|ABK74060.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=299

 Score =  231 bits (589),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 140/275 (51%), Positives = 178/275 (65%), Gaps = 5/275 (1%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            +TR   D  +K G L R+W G+Y   EP     L  LD+  G    ACL TAAAL+GFDT
Sbjct  25   ITRYAFDQALKTGVLERIWPGIYCLGEPTEPLLLRGLDLSAGTRVAACLTTAAALHGFDT  84

Query  61   ENTVAIHMLDPGV-RMRPTVGLMVHQRVGARLQ--RVSG--RLATAPAWTAVEVARQLRR  115
            E +  +H+L+P   ++R   GL+VH+R GA L    V G  R  TAPAWTAVEVAR LRR
Sbjct  85   EGSTDLHVLNPPRHQLRSVDGLVVHRREGAPLTVIDVDGDVRYVTAPAWTAVEVARALRR  144

Query  116  PRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVM  175
            PRALATLDAALRS +C R+++  A  +Q GRRGIVA R L+  AD RAES MESEARL+M
Sbjct  145  PRALATLDAALRSGKCTRADVWRAALDQAGRRGIVAVRNLIALADPRAESPMESEARLMM  204

Query  176  IDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQ  235
            +D GLP PELQ+ +    G++ R+DFAWP+ R+A EY+  +WH  P  +  D+ R A L 
Sbjct  205  LDAGLPAPELQHEVIDGMGKLRRLDFAWPECRVAVEYDGDDWHGNPDALRNDRVRAAALS  264

Query  236  ELGWTIVPIVVDDVRREPGRLAARIARHLDRARMA  270
            ++GW ++ IV +DVR  P     RI R L  AR A
Sbjct  265  DVGWLVIAIVSEDVRLRPQETVGRIDRQLGLARAA  299


>gi|258653209|ref|YP_003202365.1| hypothetical protein Namu_3039 [Nakamurella multipartita DSM 
44233]
 gi|258556434|gb|ACV79376.1| hypothetical protein Namu_3039 [Nakamurella multipartita DSM 
44233]
Length=289

 Score =  121 bits (304),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 98/250 (40%), Positives = 130/250 (52%), Gaps = 4/250 (1%)

Query  9    QVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTENTVAIHM  68
             V++  L   W G Y   + DL+ RL AL + +    VAC  TAAAL+GF   +   +H+
Sbjct  30   HVEDELLTHPWRGAYCIPDADLVTRLRALQLAVRAPLVACHQTAAALHGFGVLDDGLLHV  89

Query  69   LDP-GVRMRPTVGLMVHQRVG-ARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAAL  126
              P G  +R   G++VHQ V  A  Q   G  ATA A TAV+VA        L  LDAAL
Sbjct  90   TTPDGQSVRRRAGVLVHQWVPRAATQLADGFRATAAADTAVDVAAGAAEIDVLPVLDAAL  149

Query  127  RSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQ  186
                 A  E+  AV   + RRGI A R    FADGRA+S MES AR  +I   LP P+LQ
Sbjct  150  THCITA-DELHEAVDRAKRRRGIAAVRRWSEFADGRAQSPMESRARYRLISARLPAPDLQ  208

Query  187  YPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVV  246
              +   G   W +D  W D ++  EY+  ++H+G  ++ RD+ R  +L   GWTIV    
Sbjct  209  IRVVVPGNIRW-IDMGWEDAKVGLEYDGEDFHSGDGKLARDRQRHNQLSRAGWTIVYATA  267

Query  247  DDVRREPGRL  256
             D+ R P  L
Sbjct  268  ADIWRHPDPL  277


>gi|284032296|ref|YP_003382227.1| hypothetical protein Kfla_4395 [Kribbella flavida DSM 17836]
 gi|283811589|gb|ADB33428.1| hypothetical protein Kfla_4395 [Kribbella flavida DSM 17836]
Length=287

 Score =  113 bits (283),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 88/245 (36%), Positives = 126/245 (52%), Gaps = 19/245 (7%)

Query  12   NGGLVRVWYGVYA-AQEPDLLG-RLAALDVFMGGHAVACLGTAAALYGFDTENTVAIHML  69
            +G +  V  GVY   + PD +  R AA+   +    +AC  TAA ++G DT        +
Sbjct  30   SGDIRPVLKGVYVDTRVPDSVELRAAAVAHVLPPDGIACGRTAAWIHGIDTTALGTTEQV  89

Query  70   DPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRSM  129
            D           +   R    +  V+G+  T+P  T VE+A QL RP AL+ +DA LRS 
Sbjct  90   D-----------LHWTREATDVVDVAGQRVTSPIATTVELAMQLPRPFALSAVDAMLRSG  138

Query  130  RCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPI  189
               R  +  A AE  GR GIV AR++L +AD RAES  ES  RL ++D G   PELQ  +
Sbjct  139  IADRWAVRAASAEYDGRPGIVQARQILYYADRRAESPGESWLRLRLLDAGFGRPELQIRV  198

Query  190  HGHGGEMWRVDFAWPD-----MRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPI  244
             G   + +R+D  +P+      RL  EY+S  WH+ P E  RD+ R  +L  LGW ++ +
Sbjct  199  KGSTRD-YRIDLGYPEPLDDGRRLGLEYDSDRWHSRPREEARDEQRRDELAALGWHVISV  257

Query  245  VVDDV  249
               D+
Sbjct  258  RRTDL  262


>gi|315500993|ref|YP_004079880.1| hypothetical protein ML5_0176 [Micromonospora sp. L5]
 gi|315407612|gb|ADU05729.1| hypothetical protein ML5_0176 [Micromonospora sp. L5]
Length=307

 Score =  110 bits (274),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 100/280 (36%), Positives = 133/280 (48%), Gaps = 15/280 (5%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVY----AAQEPDLLGR--LAALDVFMGGHAVACLGTAAA  54
            + R+Q+   V++G   RV  G Y    A   P  L R  + A    +G  AVA LGTAA 
Sbjct  28   LGREQIRYLVRSGRWTRVSRGCYLPSPAVLTPVALRRAMIRATVASLGRGAVAVLGTAAE  87

Query  55   LYGF-DTENTVAIHML----DPGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAV  107
            L+G      T AIH+      P V+ R   GL VHQ     A + R  G   T PA T  
Sbjct  88   LHGIAGLPPTAAIHVSVPPDRPHVQRRAEPGLTVHQLTLAEADVCRAGGVPVTTPARTVA  147

Query  108  EVARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAM  167
            +V  + RR  A+  LD+AL     A +++   +    GRRG VAAR  L  ADGRA+S +
Sbjct  148  DVLLRARRYPAVCILDSALNQRILAENDLSLVLTHLTGRRGAVAARGYLAEADGRAQSPL  207

Query  168  ESEARLVMIDHGLPLPELQYPIHGHGGEMWRV-DFAWPDMRLAAEYESIEWHAGPAEMLR  226
            E+ ARL  +D G+P   LQ P+    G +  V D AW   RL AE +    H  P  +  
Sbjct  208  ETRARLRCVDGGVPPDVLQLPVRDEDGYLLGVGDLAWRGARLIAEADGRGPHLTPQAVYA  267

Query  227  DKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDR  266
            D+ R  +L   GW I+     D  R P  +   + R L R
Sbjct  268  DRFRQNRLVNAGWRILRFTWSDTLR-PDYIPQTVKRALKR  306


>gi|238062830|ref|ZP_04607539.1| hypothetical protein MCAG_03796 [Micromonospora sp. ATCC 39149]
 gi|237884641|gb|EEP73469.1| hypothetical protein MCAG_03796 [Micromonospora sp. ATCC 39149]
Length=294

 Score =  107 bits (266),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 92/262 (36%), Positives = 131/262 (50%), Gaps = 4/262 (1%)

Query  2    TRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDTE  61
            TR++L  ++ NG +VR   GVYA +    L  L AL + +   A+    TAA L+GF   
Sbjct  29   TRKRLRTRLANGRVVRARRGVYADRPVKDLDALRALLLCLPAEAMLSRQTAARLHGFGVL  88

Query  62   NTVAIHM-LDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAW-TAVEVARQLRRPRAL  119
               A+H+ L P V      GL+VH         +   L  APA    V++AR +RR  AL
Sbjct  89   AEDAVHVQLPPNVAKPRLPGLVVHHSALPVEPVLVRGLPCAPAARCVVDLARTIRRLDAL  148

Query  120  ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHG  179
              LDA LR+    R E+    +  RG  G+  AR L+P ADGR+E   ES+ RLV+ID G
Sbjct  149  PVLDAVLRTGSVCRDELAEEASAHRGLPGVRQARSLVPLADGRSECRQESQLRLVLIDGG  208

Query  180  LPLPELQ-YPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELG  238
            LP PE Q + + G G   +R+D  + + R+  EY+ +  H     +  D+ R   L   G
Sbjct  209  LPAPEPQVWVLDGEGVGRYRLDLGYRERRVGIEYDGLS-HLDRDRLRYDRDRANWLASEG  267

Query  239  WTIVPIVVDDVRREPGRLAARI  260
            WT+      D+ R P  +   I
Sbjct  268  WTMRHFTDRDLYRRPAHIVTTI  289


>gi|118468379|ref|YP_884671.1| hypothetical protein MSMEG_0256 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169666|gb|ABK70562.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=300

 Score =  105 bits (261),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 73/238 (31%), Positives = 116/238 (49%), Gaps = 8/238 (3%)

Query  17   RVWYGVY--AAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLDPGV  73
            R++  +Y  A   P L+  +    +  G   +     A+AL+G D  +  +A+ M+    
Sbjct  27   RMYRDIYIPAGYTPTLIDHIDGAWLRSGRQGIVAGVAASALFGADWVDAGIAVEMVWDNT  86

Query  74   RMRPTVGLMVHQRVGARLQRVSGRL--ATAPAWTAVEVARQLRRPRALATLDAALRSMRC  131
            R  P  G++         +  + +    T PA TA ++ R LRR  ALA +DA +R+   
Sbjct  87   R--PPRGIIARDERTEDDEITTAQCITVTTPARTAFDLGRHLRRSEALARMDALMRATAF  144

Query  132  ARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYPIHG  191
            +  ++       RG RGI   RELLP  DG AES  E+  RL++ D G P P  Q P   
Sbjct  145  SPDDVAALAERYRGARGIRQLRELLPLVDGGAESPRETRTRLLLFDAGFPRPTTQIPAVD  204

Query  192  HGGEMWR-VDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
              G + R +D  W +  +AAEY+  +     A  ++D   W KL+ELGW ++ ++ +D
Sbjct  205  ERGRLVRMLDMGWEEFMVAAEYDGDQHRTERARYVKDIRVWPKLRELGWDVIRVIKED  262


>gi|254773599|ref|ZP_05215115.1| hypothetical protein MaviaA2_02830 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=290

 Score =  104 bits (260),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 70/212 (34%), Positives = 107/212 (51%), Gaps = 4/212 (1%)

Query  51   TAAALYGFD-TENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEV  109
            +AAALYG    ++     +L P  R    +     + VG  +Q + G   T PA TA+++
Sbjct  63   SAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDI  122

Query  110  ARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMES  169
            A +    +A+A +DA  R+      EIE      RGRRGI  AR +LP  D  AES  E+
Sbjct  123  ACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRARSVLPLVDAGAESPRET  182

Query  170  EARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKT  229
              RL+++  G P P  Q P+  +G  +  +D  W D++LA EY+  +      +  +D  
Sbjct  183  WLRLLLLRAGFPRPRTQLPVRQYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDIR  242

Query  230  RWAKLQELGWTIVPIVVDDVRREPGRLAARIA  261
            R   L ELGWT+V +  +D    P  + AR++
Sbjct  243  RAEVLAELGWTVVRVTAEDT---PAGIIARVS  271


>gi|118463860|ref|YP_879922.1| hypothetical protein MAV_0642 [Mycobacterium avium 104]
 gi|118165147|gb|ABK66044.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=290

 Score =  104 bits (260),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 70/211 (34%), Positives = 106/211 (51%), Gaps = 4/211 (1%)

Query  51   TAAALYGFD-TENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATAPAWTAVEV  109
            +AAALYG    ++     +L P  R    +     + VG  +Q + G   T PA TA+++
Sbjct  63   SAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDI  122

Query  110  ARQLRRPRALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMES  169
            A +    +A+A +DA  R+      EIE      RGRRGI  AR +LP  D  AES  E+
Sbjct  123  ACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRARNVLPLVDAGAESPRET  182

Query  170  EARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKT  229
              RL+++  G P P  Q P+  +G  +  +D  W D++LA EY+  +      +  +D  
Sbjct  183  WLRLLLLRAGFPRPRTQLPVRQYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDIR  242

Query  230  RWAKLQELGWTIVPIVVDDVRREPGRLAARI  260
            R   L ELGWT+V +  +D    P  + AR+
Sbjct  243  RAEVLAELGWTVVRVTAEDT---PAGIIARV  270


>gi|302866131|ref|YP_003834768.1| hypothetical protein Micau_1637 [Micromonospora aurantiaca ATCC 
27029]
 gi|302568990|gb|ADL45192.1| hypothetical protein Micau_1637 [Micromonospora aurantiaca ATCC 
27029]
Length=281

 Score =  103 bits (257),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 88/264 (34%), Positives = 124/264 (47%), Gaps = 6/264 (2%)

Query  1    MTRQQLDVQVKNGGLVRVWYGVYAAQEPDLLGRLAALDVFMGGHAVACLGTAAALYGFDT  60
            M+R  +  QV  G L R+  GVY   + D   RL AL   +    VA   T A L+ F  
Sbjct  12   MSRGAVRHQVGAGLLGRLSRGVYGCTD-DETSRLRALFRRLPPGTVAGFHTGARLHRFGA  70

Query  61   ENTVAIHML-DPGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPR  117
                 +H++  PGV  R   G+  HQ V        ++G      A  AV++AR +RR  
Sbjct  71   VPGDRVHVIVPPGVSARRIRGVATHQTVLPVPDAVEIAGIPCAPAARCAVDLARVIRRAD  130

Query  118  ALATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMID  177
            AL  LD  LR   C R ++   VA   G RG+  A EL+  AD R E   ES+ RL++ID
Sbjct  131  ALPVLDLCLRVGACRREDLLTEVAWHAGLRGVRQAGELIALADPRPECRQESQLRLLLID  190

Query  178  HGLPLPELQYPIHGHGG-EMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQE  236
             GLP PE Q  +    G  ++R+D  + D R+  EY+    H  P  +  D++R   L E
Sbjct  191  GGLPPPEPQLWVPDRDGIPIYRLDLGYRDRRIGLEYDGGS-HLDPGRLHHDRSRLNWLAE  249

Query  237  LGWTIVPIVVDDVRREPGRLAARI  260
             GW +      D+ R    + A +
Sbjct  250  HGWRMRVYTATDLYRRSRHIVATV  273


>gi|289571958|ref|ZP_06452185.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289545712|gb|EFD49360.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=296

 Score =  103 bits (256),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 117/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  39   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  98

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  99   PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRDEAVARLDALMRA  156

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  157  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  216

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  217  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  276


>gi|340628688|ref|YP_004747140.1| hypothetical protein MCAN_37361 [Mycobacterium canettii CIPT 
140010059]
 gi|340006878|emb|CCC46067.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=296

 Score =  103 bits (256),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 118/240 (50%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  39   WYQPMFRGVYVSRRSVPTLRDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  98

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  99   PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  156

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S+ E+  RL++ID GLP+P  Q P
Sbjct  157  TPFSRDDVLLLAKRHAGARGVRWLRDVLPLVDGGAASSKETWLRLLLIDAGLPVPTTQIP  216

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  217  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  276


>gi|308374960|ref|ZP_07442226.2| hypothetical protein TMGG_01257 [Mycobacterium tuberculosis SUMu007]
 gi|308378449|ref|ZP_07482616.2| hypothetical protein TMIG_00065 [Mycobacterium tuberculosis SUMu009]
 gi|308347858|gb|EFP36709.1| hypothetical protein TMGG_01257 [Mycobacterium tuberculosis SUMu007]
 gi|308352511|gb|EFP41362.1| hypothetical protein TMIG_00065 [Mycobacterium tuberculosis SUMu009]
Length=284

 Score =  103 bits (256),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 117/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  27   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNVASALHGAQWVDVDVAIELIS  86

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  87   PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  144

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  145  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  204

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  205  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  264


>gi|308232545|ref|ZP_07416408.2| hypothetical protein TMAG_00205 [Mycobacterium tuberculosis SUMu001]
 gi|308369209|ref|ZP_07416940.2| hypothetical protein TMBG_02253 [Mycobacterium tuberculosis SUMu002]
 gi|308371433|ref|ZP_07424948.2| hypothetical protein TMCG_01218 [Mycobacterium tuberculosis SUMu003]
 17 more sequence titles
 
gi|308372631|ref|ZP_07429314.2| hypothetical protein TMDG_01450 [Mycobacterium tuberculosis SUMu004]
 gi|308372718|ref|ZP_07429613.2| hypothetical protein TMEG_00209 [Mycobacterium tuberculosis SUMu005]
 gi|308373796|ref|ZP_07433678.2| hypothetical protein TMFG_01947 [Mycobacterium tuberculosis SUMu006]
 gi|308376202|ref|ZP_07438015.2| hypothetical protein TMHG_02778 [Mycobacterium tuberculosis SUMu008]
 gi|308379595|ref|ZP_07486849.2| hypothetical protein TMJG_00966 [Mycobacterium tuberculosis SUMu010]
 gi|308380781|ref|ZP_07491066.2| hypothetical protein TMKG_00956 [Mycobacterium tuberculosis SUMu011]
 gi|308213600|gb|EFO72999.1| hypothetical protein TMAG_00205 [Mycobacterium tuberculosis SUMu001]
 gi|308328333|gb|EFP17184.1| hypothetical protein TMBG_02253 [Mycobacterium tuberculosis SUMu002]
 gi|308328737|gb|EFP17588.1| hypothetical protein TMCG_01218 [Mycobacterium tuberculosis SUMu003]
 gi|308332579|gb|EFP21430.1| hypothetical protein TMDG_01450 [Mycobacterium tuberculosis SUMu004]
 gi|308340070|gb|EFP28921.1| hypothetical protein TMEG_00209 [Mycobacterium tuberculosis SUMu005]
 gi|308344060|gb|EFP32911.1| hypothetical protein TMFG_01947 [Mycobacterium tuberculosis SUMu006]
 gi|308351846|gb|EFP40697.1| hypothetical protein TMHG_02778 [Mycobacterium tuberculosis SUMu008]
 gi|308356461|gb|EFP45312.1| hypothetical protein TMJG_00966 [Mycobacterium tuberculosis SUMu010]
 gi|308360408|gb|EFP49259.1| hypothetical protein TMKG_00956 [Mycobacterium tuberculosis SUMu011]
 gi|323717578|gb|EGB26780.1| hypothetical protein TMMG_00205 [Mycobacterium tuberculosis CDC1551A]
 gi|339300124|gb|AEJ52234.1| hypothetical protein CCDC5180_3397 [Mycobacterium tuberculosis 
CCDC5180]
Length=284

 Score =  102 bits (255),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 117/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  27   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  86

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  87   PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  144

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  145  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  204

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  205  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  264


>gi|308406227|ref|ZP_07495622.2| hypothetical protein TMLG_00204 [Mycobacterium tuberculosis SUMu012]
 gi|308364104|gb|EFP52955.1| hypothetical protein TMLG_00204 [Mycobacterium tuberculosis SUMu012]
Length=291

 Score =  102 bits (255),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 117/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  34   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  93

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  94   PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  151

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  152  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  211

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  212  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  271


>gi|15610850|ref|NP_218231.1| hypothetical protein Rv3714c [Mycobacterium tuberculosis H37Rv]
 gi|31794886|ref|NP_857379.1| hypothetical protein Mb3741c [Mycobacterium bovis AF2122/97]
 gi|121639630|ref|YP_979854.1| hypothetical protein BCG_3774c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 46 more sequence titles
 
gi|148663579|ref|YP_001285102.1| hypothetical protein MRA_3751 [Mycobacterium tuberculosis H37Ra]
 gi|148824919|ref|YP_001289673.1| hypothetical protein TBFG_13746 [Mycobacterium tuberculosis F11]
 gi|167970869|ref|ZP_02553146.1| hypothetical protein MtubH3_23620 [Mycobacterium tuberculosis 
H37Ra]
 gi|224992126|ref|YP_002646815.1| hypothetical protein JTY_3776 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800760|ref|YP_003033761.1| hypothetical protein TBMG_03758 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233209|ref|ZP_04926535.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254366259|ref|ZP_04982303.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289441150|ref|ZP_06430894.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445313|ref|ZP_06435057.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555979|ref|ZP_06445189.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289572365|ref|ZP_06452592.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747553|ref|ZP_06506931.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289748232|ref|ZP_06507610.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755845|ref|ZP_06515223.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759874|ref|ZP_06519252.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763895|ref|ZP_06523273.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294995376|ref|ZP_06801067.1| hypothetical protein Mtub2_12906 [Mycobacterium tuberculosis 
210]
 gi|297636392|ref|ZP_06954172.1| hypothetical protein MtubK4_19800 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733386|ref|ZP_06962504.1| hypothetical protein MtubKR_19940 [Mycobacterium tuberculosis 
KZN R506]
 gi|298527191|ref|ZP_07014600.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|313660717|ref|ZP_07817597.1| hypothetical protein MtubKV_19935 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633706|ref|YP_004725348.1| hypothetical protein MAF_37230 [Mycobacterium africanum GM041182]
 gi|2960138|emb|CAA18036.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31620484|emb|CAD95927.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121495278|emb|CAL73764.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124603002|gb|EAY61277.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151771|gb|EBA43816.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507731|gb|ABQ75540.1| hypothetical protein MRA_3751 [Mycobacterium tuberculosis H37Ra]
 gi|148723446|gb|ABR08071.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224775241|dbj|BAH28047.1| hypothetical protein JTY_3776 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322263|gb|ACT26866.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289414069|gb|EFD11309.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289418271|gb|EFD15472.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440611|gb|EFD23104.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289536796|gb|EFD41374.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289688081|gb|EFD55569.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289688819|gb|EFD56248.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289696432|gb|EFD63861.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711401|gb|EFD75417.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289715438|gb|EFD79450.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496985|gb|EFI32279.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326905553|gb|EGE52486.1| hypothetical protein TBPG_03508 [Mycobacterium tuberculosis W-148]
 gi|328460488|gb|AEB05911.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339333062|emb|CCC28792.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341603651|emb|CCC66332.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221551|gb|AEN02182.1| hypothetical protein MTCTRI2_3785 [Mycobacterium tuberculosis 
CTRI-2]
Length=296

 Score =  102 bits (255),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 117/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  39   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  98

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  99   PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  156

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  157  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  216

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  217  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  276


>gi|15843335|ref|NP_338372.1| hypothetical protein MT3817 [Mycobacterium tuberculosis CDC1551]
 gi|13883697|gb|AAK48186.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=341

 Score =  102 bits (253),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 75/240 (32%), Positives = 117/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  84   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  143

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       + RV G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  144  PTTR--PQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  201

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  202  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  261

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  262  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  321


>gi|339296524|gb|AEJ48635.1| hypothetical protein CCDC5079_3446 [Mycobacterium tuberculosis 
CCDC5079]
Length=284

 Score =  100 bits (249),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 74/240 (31%), Positives = 116/240 (49%), Gaps = 12/240 (5%)

Query  19   WY-----GVYAAQE--PDLLGRLAALDVFMGGHAVACLGTAAALYGFD-TENTVAIHMLD  70
            WY     GVY ++   P L  R     +    H V     A+AL+G    +  VAI ++ 
Sbjct  27   WYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAASALHGAQWVDVDVAIELIS  86

Query  71   PGVRMRPTVGLMVHQRV--GARLQRVSGRLATAPAWTAVEVARQLRRPRALATLDAALRS  128
            P  R  P  GL++ +       +  V G   T  A TA ++ R L R  A+A LDA +R+
Sbjct  87   PTTR--PQHGLVIRRETLCDDEITSVVGLPVTTLARTAYDLGRHLSRGEAVARLDALMRA  144

Query  129  MRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMESEARLVMIDHGLPLPELQYP  188
               +R ++        G RG+   R++LP  DG A S  E+  RL++ID GLP+P  Q P
Sbjct  145  TPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWLRLLLIDAGLPVPTTQIP  204

Query  189  IHGHGGEMWRVDFAWPDMRLAAEYESIEWHAGPAEMLRDKTRWAKLQELGWTIVPIVVDD  248
            +      +  +D  W    +AAEY+  +  +     ++D+ R  KL ELGW ++ ++ +D
Sbjct  205  VVHRWRNVGVLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRRLRKLAELGWIVIRVIAED  264



Lambda     K      H
   0.323    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 419877318148


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40