BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2250A Length=139 Score E Sequences producing significant alignments: (Bits) Value gi|57116960|ref|YP_177662.1| flavoprotein [Mycobacterium tubercu... 273 7e-72 gi|289443761|ref|ZP_06433505.1| flavoprotein [Mycobacterium tube... 216 1e-54 gi|254232398|ref|ZP_04925725.1| hypothetical protein TBCG_02199 ... 216 1e-54 gi|289574940|ref|ZP_06455167.1| flavoprotein [Mycobacterium tube... 216 1e-54 gi|15841744|ref|NP_336781.1| alkyl-dihydroxyacetonephosphate syn... 216 1e-54 gi|339295167|gb|AEJ47278.1| flavoprotein [Mycobacterium tubercul... 215 2e-54 gi|289745524|ref|ZP_06504902.1| flavoprotein [Mycobacterium tube... 212 1e-53 gi|240170088|ref|ZP_04748747.1| flavoprotein [Mycobacterium kans... 176 1e-42 gi|118616997|ref|YP_905329.1| flavoprotein [Mycobacterium ulcera... 167 4e-40 gi|183983334|ref|YP_001851625.1| flavoprotein [Mycobacterium mar... 166 8e-40 gi|296166144|ref|ZP_06848589.1| possible Alkylglycerone-phosphat... 154 6e-36 gi|254823482|ref|ZP_05228483.1| hypothetical protein MintA_26368... 149 2e-34 gi|342857279|ref|ZP_08713935.1| hypothetical protein MCOL_00335 ... 146 9e-34 gi|41408102|ref|NP_960938.1| hypothetical protein MAP2004 [Mycob... 142 2e-32 gi|336461778|gb|EGO40636.1| FAD/FMN-dependent dehydrogenase [Myc... 142 2e-32 gi|254774896|ref|ZP_05216412.1| flavoprotein [Mycobacterium aviu... 142 2e-32 gi|118462361|ref|YP_881395.1| flavoprotein [Mycobacterium avium ... 142 2e-32 gi|118472412|ref|YP_888609.1| flavoprotein [Mycobacterium smegma... 139 2e-31 gi|333990282|ref|YP_004522896.1| flavoprotein [Mycobacterium sp.... 137 5e-31 gi|145223359|ref|YP_001134037.1| alkylglycerone-phosphate syntha... 126 1e-27 gi|120404720|ref|YP_954549.1| alkylglycerone-phosphate synthase ... 123 1e-26 gi|108800340|ref|YP_640537.1| alkylglycerone-phosphate synthase ... 117 6e-25 gi|226308502|ref|YP_002768462.1| FAD-linked oxidase [Rhodococcus... 108 3e-22 gi|229488843|ref|ZP_04382709.1| alkyldihydroxyacetonephosphate s... 107 8e-22 gi|54023312|ref|YP_117554.1| hypothetical protein nfa13450 [Noca... 104 4e-21 gi|226364562|ref|YP_002782344.1| FAD-linked oxidase [Rhodococcus... 98.6 3e-19 gi|111022057|ref|YP_705029.1| alkylglycerone-phosphate synthase ... 95.1 3e-18 gi|325672744|ref|ZP_08152440.1| alkylglycerone-phosphate synthas... 90.1 1e-16 gi|169630963|ref|YP_001704612.1| flavoprotein [Mycobacterium abs... 89.7 1e-16 gi|312139375|ref|YP_004006711.1| fad-dependent oxidoreductase [R... 89.4 2e-16 gi|317509228|ref|ZP_07966849.1| FAD linked oxidase domain-contai... 78.2 4e-13 gi|296270209|ref|YP_003652841.1| alkylglycerone-phosphate syntha... 76.3 2e-12 gi|297189922|ref|ZP_06907320.1| flavoprotein [Streptomyces prist... 73.9 7e-12 gi|271967938|ref|YP_003342134.1| alkylglycerone-phosphate syntha... 71.2 4e-11 gi|297559283|ref|YP_003678257.1| alkylglycerone-phosphate syntha... 71.2 4e-11 gi|331698317|ref|YP_004334556.1| Alkylglycerone-phosphate syntha... 70.9 6e-11 gi|328887276|emb|CCA60515.1| Alkyldihydroxyacetonephosphate synt... 67.8 6e-10 gi|213965513|ref|ZP_03393708.1| flavoprotein [Corynebacterium am... 67.4 7e-10 gi|315655749|ref|ZP_07908647.1| putative Alkylglycerone-phosphat... 67.0 1e-09 gi|317124124|ref|YP_004098236.1| Alkylglycerone-phosphate syntha... 66.2 2e-09 gi|262204224|ref|YP_003275432.1| alkylglycerone-phosphate syntha... 65.5 2e-09 gi|334564243|ref|ZP_08517234.1| putative alkylglycerone-phosphat... 65.5 3e-09 gi|304390886|ref|ZP_07372838.1| possible Alkylglycerone-phosphat... 65.5 3e-09 gi|315656330|ref|ZP_07909221.1| alkylglycerone-phosphate synthas... 65.1 3e-09 gi|336177359|ref|YP_004582734.1| Alkylglycerone-phosphate syntha... 64.7 4e-09 gi|117164865|emb|CAJ88414.1| putative flavoprotein [Streptomyces... 64.3 6e-09 gi|298345329|ref|YP_003718016.1| putative alkylglycerone-phospha... 63.9 8e-09 gi|21219198|ref|NP_624977.1| flavoprotein [Streptomyces coelicol... 63.2 1e-08 gi|289773664|ref|ZP_06533042.1| flavoprotein [Streptomyces livid... 63.2 1e-08 gi|269126040|ref|YP_003299410.1| Alkylglycerone-phosphate syntha... 61.6 3e-08 >gi|57116960|ref|YP_177662.1| flavoprotein [Mycobacterium tuberculosis H37Rv] gi|41353674|emb|CAE55464.1| POSSIBLE FLAVOPROTEIN [Mycobacterium tuberculosis H37Rv] gi|339298787|gb|AEJ50897.1| flavoprotein [Mycobacterium tuberculosis CCDC5180] Length=139 Score = 273 bits (697), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGGGRRRRHLALLL 120 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGGGRRRRHLALLL Sbjct 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGGGRRRRHLALLL 120 Query 121 RPRHCRGPVWWRHQRRWWA 139 RPRHCRGPVWWRHQRRWWA Sbjct 121 RPRHCRGPVWWRHQRRWWA 139 >gi|289443761|ref|ZP_06433505.1| flavoprotein [Mycobacterium tuberculosis T46] gi|289758376|ref|ZP_06517754.1| flavoprotein [Mycobacterium tuberculosis T85] gi|289762414|ref|ZP_06521792.1| flavoprotein [Mycobacterium tuberculosis GM 1503] gi|289416680|gb|EFD13920.1| flavoprotein [Mycobacterium tuberculosis T46] gi|289709920|gb|EFD73936.1| flavoprotein [Mycobacterium tuberculosis GM 1503] gi|289713940|gb|EFD77952.1| flavoprotein [Mycobacterium tuberculosis T85] Length=539 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 11 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 70 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG Sbjct 71 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 118 >gi|254232398|ref|ZP_04925725.1| hypothetical protein TBCG_02199 [Mycobacterium tuberculosis C] gi|124601457|gb|EAY60467.1| hypothetical protein TBCG_02199 [Mycobacterium tuberculosis C] Length=537 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 11 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 70 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG Sbjct 71 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 118 >gi|289574940|ref|ZP_06455167.1| flavoprotein [Mycobacterium tuberculosis K85] gi|339632277|ref|YP_004723919.1| flavoprotein [Mycobacterium africanum GM041182] gi|289539371|gb|EFD43949.1| flavoprotein [Mycobacterium tuberculosis K85] gi|339331633|emb|CCC27332.1| putative flavoprotein [Mycobacterium africanum GM041182] Length=529 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG Sbjct 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 >gi|15841744|ref|NP_336781.1| alkyl-dihydroxyacetonephosphate synthase, putative [Mycobacterium tuberculosis CDC1551] gi|31793431|ref|NP_855924.1| flavoprotein [Mycobacterium bovis AF2122/97] gi|121638134|ref|YP_978358.1| putative flavoprotein [Mycobacterium bovis BCG str. Pasteur 1173P2] 60 more sequence titles Length=529 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG Sbjct 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 >gi|339295167|gb|AEJ47278.1| flavoprotein [Mycobacterium tuberculosis CCDC5079] Length=389 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG Sbjct 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 >gi|289745524|ref|ZP_06504902.1| flavoprotein [Mycobacterium tuberculosis 02_1987] gi|289686052|gb|EFD53540.1| flavoprotein [Mycobacterium tuberculosis 02_1987] Length=169 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI Sbjct 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG Sbjct 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNG 108 >gi|240170088|ref|ZP_04748747.1| flavoprotein [Mycobacterium kansasii ATCC 12478] Length=526 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 88/104 (85%), Positives = 94/104 (91%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLSDG+R+LLKQVVGL DS++ ELDP QV LRPSALS AD DALA I Sbjct 1 MKWNAWGDPAAAKPLSDGIRALLKQVVGLGDSDEAELDPDQVILRPSALSQADRDALAEI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EYFR ADRDRLLHAGGKSTPD+LRRKDTG QDAPDAVLLPG Sbjct 61 VGAEYFRAADRDRLLHAGGKSTPDMLRRKDTGPQDAPDAVLLPG 104 >gi|118616997|ref|YP_905329.1| flavoprotein [Mycobacterium ulcerans Agy99] gi|118569107|gb|ABL03858.1| flavoprotein [Mycobacterium ulcerans Agy99] Length=526 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 83/104 (80%), Positives = 93/104 (90%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLSDG+R+LLKQVVGL DS++ EL QV+LRP ALS +D DALA+I Sbjct 1 MKWNAWGDPAAAKPLSDGIRALLKQVVGLEDSDEAELGADQVKLRPCALSQSDQDALAKI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY RTADRDRLL AGGKSTPD+LRRKDTG+QDAPDAVLLPG Sbjct 61 VGPEYMRTADRDRLLRAGGKSTPDMLRRKDTGIQDAPDAVLLPG 104 >gi|183983334|ref|YP_001851625.1| flavoprotein [Mycobacterium marinum M] gi|183176660|gb|ACC41770.1| flavoprotein [Mycobacterium marinum M] Length=526 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 83/104 (80%), Positives = 92/104 (89%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLSDG+R+LLKQVVGL DS + EL QV+LRP ALS +D DALA+I Sbjct 1 MKWNAWGDPAAAKPLSDGIRALLKQVVGLEDSGEAELGADQVKLRPCALSQSDQDALAKI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY RTADRDRLL AGGKSTPD+LRRKDTG+QDAPDAVLLPG Sbjct 61 VGPEYMRTADRDRLLRAGGKSTPDMLRRKDTGIQDAPDAVLLPG 104 >gi|296166144|ref|ZP_06848589.1| possible Alkylglycerone-phosphate synthase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898553|gb|EFG78114.1| possible Alkylglycerone-phosphate synthase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=536 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 78/104 (75%), Positives = 89/104 (86%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+R+LLKQ VG+ DS EL+P +V+LRPSALS A +ALA + Sbjct 11 MKWNAWGDPAAAKPLSEGIRTLLKQAVGVDDSAAAELEPDRVRLRPSALSRAHREALAEL 70 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG Y RT DRDRLLHAGGKST DLLRRKDTGVQDAPDA+LLPG Sbjct 71 VGAAYCRTEDRDRLLHAGGKSTLDLLRRKDTGVQDAPDAILLPG 114 >gi|254823482|ref|ZP_05228483.1| hypothetical protein MintA_26368 [Mycobacterium intracellulare ATCC 13950] Length=526 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/107 (72%), Positives = 86/107 (81%), Gaps = 0/107 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+RSLL+Q VG+ S EL P QV+LRPSALS D +ALA I Sbjct 1 MKWNAWGDPAAAKPLSEGIRSLLQQAVGVEGSPAAELQPDQVELRPSALSPTDREALAAI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPN 107 VG +Y RTAD DRLLHAGGKST DLL RK G QDAPDAVLLPGG + Sbjct 61 VGADYCRTADSDRLLHAGGKSTVDLLNRKQRGPQDAPDAVLLPGGED 107 >gi|342857279|ref|ZP_08713935.1| hypothetical protein MCOL_00335 [Mycobacterium colombiense CECT 3035] gi|342134612|gb|EGT87778.1| hypothetical protein MCOL_00335 [Mycobacterium colombiense CECT 3035] Length=526 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 79/117 (68%), Positives = 89/117 (77%), Gaps = 0/117 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+RSLL+Q VG+ S EL +VQLRPSALS +D DALA I Sbjct 1 MKWNAWGDPAAAKPLSEGIRSLLQQAVGVEGSRAAELRSDEVQLRPSALSQSDRDALAAI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGGGRRRRHLA 117 VG EY RTAD DRLLHAGGKST DLLRR D G Q+APDAVLLPG + RH + Sbjct 61 VGAEYCRTADPDRLLHAGGKSTIDLLRRMDRGPQNAPDAVLLPGDDDAVAAILRHCS 117 >gi|41408102|ref|NP_960938.1| hypothetical protein MAP2004 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396457|gb|AAS04321.1| hypothetical protein MAP_2004 [Mycobacterium avium subsp. paratuberculosis K-10] Length=526 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/104 (73%), Positives = 82/104 (79%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+RSLL+Q VG+ S E P QV+LRPS LS AD +ALA I Sbjct 1 MKWNAWGDPAAAKPLSEGIRSLLQQAVGIEGSRTAEPRPEQVRLRPSTLSPADREALAAI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY RTAD DRLLHAGGKST DLL R G QDAPDAVLLPG Sbjct 61 VGPEYCRTADSDRLLHAGGKSTIDLLSRNGPGPQDAPDAVLLPG 104 >gi|336461778|gb|EGO40636.1| FAD/FMN-dependent dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=536 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/104 (73%), Positives = 82/104 (79%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+RSLL+Q VG+ S E P QV+LRPS LS AD +ALA I Sbjct 11 MKWNAWGDPAAAKPLSEGIRSLLQQAVGIEGSRTAEPRPEQVRLRPSTLSPADREALAAI 70 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY RTAD DRLLHAGGKST DLL R G QDAPDAVLLPG Sbjct 71 VGPEYCRTADSDRLLHAGGKSTIDLLSRNGPGPQDAPDAVLLPG 114 >gi|254774896|ref|ZP_05216412.1| flavoprotein [Mycobacterium avium subsp. avium ATCC 25291] Length=526 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/104 (73%), Positives = 82/104 (79%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+RSLL+Q VG+ S E P QV+LRPS LS AD +ALA I Sbjct 1 MKWNAWGDPAAAKPLSEGIRSLLQQAVGIEGSRAAEPRPEQVRLRPSTLSPADREALAAI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY RTAD DRLLHAGGKST DLL R G QDAPDAVLLPG Sbjct 61 VGPEYCRTADSDRLLHAGGKSTIDLLSRNGPGPQDAPDAVLLPG 104 >gi|118462361|ref|YP_881395.1| flavoprotein [Mycobacterium avium 104] gi|118163648|gb|ABK64545.1| flavoprotein [Mycobacterium avium 104] Length=536 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/104 (73%), Positives = 82/104 (79%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLS+G+RSLL+Q VG+ S E P QV+LRPS LS AD +ALA I Sbjct 11 MKWNAWGDPAAAKPLSEGIRSLLQQAVGIEGSRAAEPRPEQVRLRPSTLSPADREALAAI 70 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY RTAD DRLLHAGGKST DLL R G QDAPDAVLLPG Sbjct 71 VGPEYCRTADSDRLLHAGGKSTIDLLSRNGPGPQDAPDAVLLPG 114 >gi|118472412|ref|YP_888609.1| flavoprotein [Mycobacterium smegmatis str. MC2 155] gi|118173699|gb|ABK74595.1| flavoprotein [Mycobacterium smegmatis str. MC2 155] Length=525 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/104 (67%), Positives = 83/104 (80%), Gaps = 1/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDP AAKPLSDG+R+LL+Q +G+ DS ++ P + LRPSAL+ AD DALA + Sbjct 1 MKWNAWGDPQAAKPLSDGIRALLQQALGVTDSPA-QISPEDITLRPSALTAADRDALAAV 59 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG +Y RT D RLLHAGGKST DLLRR +GVQDAPDA+LLPG Sbjct 60 VGEQYCRTDDTARLLHAGGKSTLDLLRRNTSGVQDAPDAILLPG 103 >gi|333990282|ref|YP_004522896.1| flavoprotein [Mycobacterium sp. JDM601] gi|333486250|gb|AEF35642.1| flavoprotein [Mycobacterium sp. JDM601] Length=526 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/104 (66%), Positives = 81/104 (78%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 MKW+AWGDPAAAKPLSDG+R LL +G+ ++ E DP QV+LRPSAL+ DH ALA I Sbjct 1 MKWNAWGDPAAAKPLSDGIRKLLTAALGIEGTDSAEPDPDQVELRPSALAEDDHKALAAI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG +++R RLLHAGGKST DLLRR +G+QDAPDAVLLPG Sbjct 61 VGEQFYRVDQAGRLLHAGGKSTLDLLRRNGSGIQDAPDAVLLPG 104 >gi|145223359|ref|YP_001134037.1| alkylglycerone-phosphate synthase [Mycobacterium gilvum PYR-GCK] gi|315443818|ref|YP_004076697.1| FAD/FMN-dependent dehydrogenase [Mycobacterium sp. Spyr1] gi|145215845|gb|ABP45249.1| Alkylglycerone-phosphate synthase [Mycobacterium gilvum PYR-GCK] gi|315262121|gb|ADT98862.1| FAD/FMN-dependent dehydrogenase [Mycobacterium sp. Spyr1] Length=527 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/119 (60%), Positives = 86/119 (73%), Gaps = 4/119 (3%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADS--EQPELDPAQVQLRPSALSGADHDALA 58 M+W+AWGDP AAKPLS G+RSLL Q +G+ + ++P LD QV+LRPSALS D D L+ Sbjct 2 MQWNAWGDPDAAKPLSPGIRSLLHQALGIDGTPLDEPTLD--QVRLRPSALSPGDRDGLS 59 Query 59 RIVGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGGGRRRRHLA 117 I+G E+ DR RLL AGGKST DLLRR+D GVQDAPDAVLLPGG + R+ A Sbjct 60 AIIGAEHVTVDDRARLLRAGGKSTLDLLRRRDFGVQDAPDAVLLPGGEDEIAEVLRYCA 118 >gi|120404720|ref|YP_954549.1| alkylglycerone-phosphate synthase [Mycobacterium vanbaalenii PYR-1] gi|119957538|gb|ABM14543.1| Alkylglycerone-phosphate synthase [Mycobacterium vanbaalenii PYR-1] Length=527 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/107 (63%), Positives = 83/107 (78%), Gaps = 4/107 (3%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGL--ADSEQPELDPAQVQLRPSALSGADHDALA 58 M+W+AWGDPAAAKPLS +R+LL Q +G+ AD ++P L+ QV+LRPSALS AD D L+ Sbjct 2 MQWNAWGDPAAAKPLSPAIRALLGQALGIDGADIDEPTLE--QVRLRPSALSPADLDGLS 59 Query 59 RIVGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGG 105 +VG T D+ RLL AGGKST DLLRR+D GVQDAPDA++LPGG Sbjct 60 AVVGAANVTTDDQARLLRAGGKSTLDLLRRRDFGVQDAPDAIVLPGG 106 >gi|108800340|ref|YP_640537.1| alkylglycerone-phosphate synthase [Mycobacterium sp. MCS] gi|119869468|ref|YP_939420.1| alkylglycerone-phosphate synthase [Mycobacterium sp. KMS] gi|126435963|ref|YP_001071654.1| alkylglycerone-phosphate synthase [Mycobacterium sp. JLS] gi|108770759|gb|ABG09481.1| Alkylglycerone-phosphate synthase [Mycobacterium sp. MCS] gi|119695557|gb|ABL92630.1| Alkylglycerone-phosphate synthase [Mycobacterium sp. KMS] gi|126235763|gb|ABN99163.1| Alkylglycerone-phosphate synthase [Mycobacterium sp. JLS] Length=525 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/105 (63%), Positives = 76/105 (73%), Gaps = 5/105 (4%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPA--QVQLRPSALSGADHDALA 58 MKW+AWGDP AAKPLSDG+R+LL+Q +G+ + P PA V +RPSAL AD DAL Sbjct 1 MKWNAWGDPDAAKPLSDGIRALLEQALGVTEGAAP---PALEDVTVRPSALPDADRDALG 57 Query 59 RIVGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 IVG Y D RLLHAGGKST DLLRR+D G Q+APDAVLLP Sbjct 58 DIVGAPYCLVDDAGRLLHAGGKSTLDLLRRRDRGEQEAPDAVLLP 102 >gi|226308502|ref|YP_002768462.1| FAD-linked oxidase [Rhodococcus erythropolis PR4] gi|226187619|dbj|BAH35723.1| putative FAD-linked oxidase [Rhodococcus erythropolis PR4] Length=539 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/104 (54%), Positives = 71/104 (69%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWGDPA + LSD V SLL +G++ + L VQ+ PSA++ + +ALA + Sbjct 14 MQWDAWGDPAKKRELSDAVTSLLTGFLGVSAPTRSRLAIEDVQVAPSAMTQSHVEALAGL 73 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY T D DR+L AGGKSTPDLLRR+ QDAPDAV+ PG Sbjct 74 VGAEYVSTKDSDRILRAGGKSTPDLLRRRSVEPQDAPDAVVTPG 117 >gi|229488843|ref|ZP_04382709.1| alkyldihydroxyacetonephosphate synthase [Rhodococcus erythropolis SK121] gi|229324347|gb|EEN90102.1| alkyldihydroxyacetonephosphate synthase [Rhodococcus erythropolis SK121] Length=530 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 55/104 (53%), Positives = 71/104 (69%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWGDPA + LSD V SLL +G++ + L VQ+ PSA++ + +AL+ + Sbjct 5 MQWDAWGDPAKKRELSDAVTSLLTGFLGVSAPTRSRLAIEDVQVAPSAMAQSHVEALSGL 64 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG EY T D DR+L AGGKSTPDLLRR+ QDAPDAV+ PG Sbjct 65 VGAEYVSTKDSDRILRAGGKSTPDLLRRRSVEPQDAPDAVVTPG 108 >gi|54023312|ref|YP_117554.1| hypothetical protein nfa13450 [Nocardia farcinica IFM 10152] gi|54014820|dbj|BAD56190.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=524 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/103 (57%), Positives = 67/103 (66%), Gaps = 0/103 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M WDAWGDPA +PLSD +R LLKQV G++ D V LRPSAL+ D LA + Sbjct 1 MVWDAWGDPAGRQPLSDQIRGLLKQVFGVSGEAVARRDEGDVPLRPSALTPHQRDGLAAV 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 VG + T RDRL HAGGKST DLLRR+ QDAPDAV+ P Sbjct 61 VGADAISTDHRDRLRHAGGKSTLDLLRRRADEPQDAPDAVVFP 103 >gi|226364562|ref|YP_002782344.1| FAD-linked oxidase [Rhodococcus opacus B4] gi|226243051|dbj|BAH53399.1| putative FAD-linked oxidase [Rhodococcus opacus B4] Length=526 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/104 (54%), Positives = 68/104 (66%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWG P K LSDG++ LL+Q +G+ E + V L PSALS DALA I Sbjct 1 MQWDAWGAPEKHKVLSDGIKGLLQQALGVTVREPSDRSADDVVLAPSALSDQHVDALAGI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG + TA DRLL +GGKST DLLRR+ T Q+APDAV+ PG Sbjct 61 VGEPFAGTAHADRLLRSGGKSTLDLLRRRSTAPQNAPDAVVTPG 104 >gi|111022057|ref|YP_705029.1| alkylglycerone-phosphate synthase [Rhodococcus jostii RHA1] gi|110821587|gb|ABG96871.1| possible alkylglycerone-phosphate synthase [Rhodococcus jostii RHA1] Length=542 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/104 (53%), Positives = 67/104 (65%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWG K LSDGV+ LL+Q +G+ E + V L PSALS ALA I Sbjct 17 MQWDAWGASEKHKVLSDGVKGLLQQALGVTIREPSDRVADDVVLAPSALSDQQIAALAGI 76 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG ++ TA DRLL +GGKST DLLRR+ T Q+APDAV+ PG Sbjct 77 VGEQFCSTAHSDRLLRSGGKSTLDLLRRRSTEPQNAPDAVITPG 120 >gi|325672744|ref|ZP_08152440.1| alkylglycerone-phosphate synthase [Rhodococcus equi ATCC 33707] gi|325556621|gb|EGD26287.1| alkylglycerone-phosphate synthase [Rhodococcus equi ATCC 33707] Length=542 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/104 (50%), Positives = 66/104 (64%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWG + LS V +LL+Q +G++ + P + + +R SAL AL + Sbjct 17 MEWDAWGVAEFRRHLSPQVTALLQQALGVSAEQSPPPEESDAIVRESALGAPLVHALEDL 76 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 +G + RT RL HAGGKSTPDLLRRK TG QDAPDAVLLPG Sbjct 77 LGVDNVRTDGPTRLRHAGGKSTPDLLRRKSTGEQDAPDAVLLPG 120 >gi|169630963|ref|YP_001704612.1| flavoprotein [Mycobacterium abscessus ATCC 19977] gi|169242930|emb|CAM63958.1| Possible flavoprotein [Mycobacterium abscessus] Length=530 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/103 (46%), Positives = 66/103 (65%), Gaps = 0/103 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWG + LS V++LL +G+ + E D + V L P++L+ A AL + Sbjct 2 MEWDAWGVAEKRQTLSPQVKALLASALGIPEREPVHRDESHVTLTPNSLTDAQRAALGGL 61 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 +G E+ T RL H+GGKSTPDLLRR+ TGVQ+APDA++ P Sbjct 62 LGAEHVSTDHGARLRHSGGKSTPDLLRRRSTGVQNAPDAIVYP 104 >gi|312139375|ref|YP_004006711.1| fad-dependent oxidoreductase [Rhodococcus equi 103S] gi|311888714|emb|CBH48026.1| putative FAD-dependent oxidoreductase [Rhodococcus equi 103S] Length=542 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/104 (50%), Positives = 66/104 (64%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+WDAWG + +S V +LL+Q +G++ + P + + +R SAL AL + Sbjct 17 MEWDAWGVAEFRRHISPQVTALLQQALGVSAEQSPPPEESDAIVRESALGAPLVHALEDL 76 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 +G + RT RL HAGGKSTPDLLRRK TG QDAPDAVLLPG Sbjct 77 LGVDNVRTDGPTRLRHAGGKSTPDLLRRKSTGEQDAPDAVLLPG 120 >gi|317509228|ref|ZP_07966849.1| FAD linked oxidase domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252438|gb|EFV11887.1| FAD linked oxidase domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length=539 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/104 (50%), Positives = 66/104 (64%), Gaps = 1/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+W+AWG P+ A+PLS G+ LL+ +G+ P P V+L P+ L+GAD ALA I Sbjct 15 MRWNAWGIPSDARPLSKGIVDLLEAALGVGGGLGPAPGPESVELPPTRLTGADVAALAAI 74 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG E+ T DRL AGGKST DLLRR++ Q APD + PG Sbjct 75 VGQEHVGTEPGDRLSRAGGKSTLDLLRRREA-RQLAPDGAVAPG 117 >gi|296270209|ref|YP_003652841.1| alkylglycerone-phosphate synthase [Thermobispora bispora DSM 43833] gi|296092996|gb|ADG88948.1| Alkylglycerone-phosphate synthase [Thermobispora bispora DSM 43833] Length=532 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/104 (45%), Positives = 57/104 (55%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W WGDP A L D VR LL +V+G+ + +P +V+L AL D LA I Sbjct 11 MNWSGWGDPDKAVELPDEVRRLLGEVLGVREPARPAAGLGEVRLPDPALPERVRDGLAAI 70 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 G + R D R+ H GKSTPDLLR + DAPDAV+ PG Sbjct 71 AGDAHVRADDETRIRHTRGKSTPDLLRMRAGDGSDAPDAVVYPG 114 >gi|297189922|ref|ZP_06907320.1| flavoprotein [Streptomyces pristinaespiralis ATCC 25486] gi|297150311|gb|EDY62486.2| flavoprotein [Streptomyces pristinaespiralis ATCC 25486] Length=532 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/105 (44%), Positives = 58/105 (56%), Gaps = 1/105 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W WGDPA A PL D V LL+ ++G+ E ++ + PS L+ A AL Sbjct 3 MLWSGWGDPAKAAPLPDTVTGLLRDLLGVTPRESGPASLEEIDVPPSGLTAAARAALTDC 62 Query 61 VGTE-YFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG + Y RT R+ H GKSTPDLLR + V D P AV+LPG Sbjct 63 VGGDAYVRTDAESRVRHTRGKSTPDLLRIRAGEVDDIPAAVVLPG 107 >gi|271967938|ref|YP_003342134.1| alkylglycerone-phosphate synthase [Streptosporangium roseum DSM 43021] gi|270511113|gb|ACZ89391.1| Alkylglycerone-phosphate synthase [Streptosporangium roseum DSM 43021] Length=521 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/104 (44%), Positives = 61/104 (59%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W WGDPA A L +R LL+ ++G+ + E P +V+L +ALS L I Sbjct 1 MLWSGWGDPAKAAALPAPIRGLLRDLLGVREPETPAASFGEVRLPVAALSPLVLSELGGI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG ++ R+ D R+ H GKSTPDL+R + DAPDAV+LPG Sbjct 61 VGADHVRSDDDARIRHTRGKSTPDLMRMRAGDGSDAPDAVVLPG 104 >gi|297559283|ref|YP_003678257.1| alkylglycerone-phosphate synthase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843731|gb|ADH65751.1| Alkylglycerone-phosphate synthase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=524 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/103 (44%), Positives = 58/103 (57%), Gaps = 0/103 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W WGDPA A+ L G+R L+ QV+ ++ P + +V+L PS L LA + Sbjct 1 MSWFGWGDPARARALDPGLRDLVSQVLRAPLADLPPVPEERVELPPSRLDERLRGLLAGV 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 VG + D RL H+GGKSTPDLL R+ APDAVL P Sbjct 61 VGPGHVDDGDAARLRHSGGKSTPDLLLRRAGRADPAPDAVLYP 103 >gi|331698317|ref|YP_004334556.1| Alkylglycerone-phosphate synthase [Pseudonocardia dioxanivorans CB1190] gi|326953006|gb|AEA26703.1| Alkylglycerone-phosphate synthase [Pseudonocardia dioxanivorans CB1190] Length=522 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/107 (41%), Positives = 57/107 (54%), Gaps = 0/107 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W WGDP A L GV +LL+Q +G+ +E+P + ++V L P L A LA Sbjct 1 MLWSGWGDPEKAVTLPPGVVTLLEQALGVQPAERPPVALSEVTLPPPKLDMAVSSELAMF 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPN 107 VG + R+ HA G+ST DLLR + APDAV+LP N Sbjct 61 VGPPNLHSHRDARIRHAAGRSTTDLLRLRAGDASGAPDAVVLPATHN 107 >gi|328887276|emb|CCA60515.1| Alkyldihydroxyacetonephosphate synthase [Streptomyces venezuelae ATCC 10712] Length=531 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 56/106 (53%), Gaps = 1/106 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDAL-AR 59 M W WGDPA A PL + V LL+ ++G+ E A + + AL+ +AL A Sbjct 3 MLWSGWGDPAKAAPLPESVTGLLRDLLGVTPRENGPATLADIDVPAPALTDEAREALRAA 62 Query 60 IVGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGG 105 + + R R+ H GKSTPDLLR + V D P AV+LPGG Sbjct 63 VAAPDGLRDDTESRIRHTRGKSTPDLLRIRAGEVDDIPAAVVLPGG 108 >gi|213965513|ref|ZP_03393708.1| flavoprotein [Corynebacterium amycolatum SK46] gi|213951897|gb|EEB63284.1| flavoprotein [Corynebacterium amycolatum SK46] Length=564 Score = 67.4 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 39/104 (38%), Positives = 57/104 (55%), Gaps = 1/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLA-DSEQPELDPAQVQLRPSALSGADHDALAR 59 M+W WG KP++ LL++ +G++ D+ P + A V + S LS D +AL Sbjct 11 MRWWGWGVDGNDKPITAASEKLLQREIGMSLDANNPPRNIADVTIPDSRLSTEDIEALGA 70 Query 60 IVGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 IVG + T R+ HA G+S PDL+R + + APDAV LP Sbjct 71 IVGADAVATDHDTRVNHAVGRSYPDLVRLRAAKLDVAPDAVALP 114 >gi|315655749|ref|ZP_07908647.1| putative Alkylglycerone-phosphate synthase [Mobiluncus curtisii ATCC 51333] gi|315489813|gb|EFU79440.1| putative Alkylglycerone-phosphate synthase [Mobiluncus curtisii ATCC 51333] Length=556 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/104 (40%), Positives = 58/104 (56%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+ + WG P +K LS V+ LL +++G+ + AQ +L P L AD AL +I Sbjct 29 MEHNLWGTPDESKELSASVQKLLHKLLGVGELTLHRRTTAQTELSPIRLGDADLAALGKI 88 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG+ Y T R+ A GKS PDL+ + V +APDAV+ PG Sbjct 89 VGSGYVTTDKEQRIRRARGKSYPDLVDWRMDRVIEAPDAVVAPG 132 >gi|317124124|ref|YP_004098236.1| Alkylglycerone-phosphate synthase [Intrasporangium calvum DSM 43043] gi|315588212|gb|ADU47509.1| Alkylglycerone-phosphate synthase [Intrasporangium calvum DSM 43043] Length=579 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/103 (44%), Positives = 57/103 (56%), Gaps = 1/103 (0%) Query 3 WDAWGDPAAAKPLSDGVRSLLKQVVGLADSE-QPELDPAQVQLRPSALSGADHDALARIV 61 W WGDPA L D + L +G+ S+ P + +V+LRPS L A ALA V Sbjct 14 WHGWGDPAERPALGDEAWTELAARIGVDRSDVAPPVPIDEVRLRPSRLGEAPLAALAGAV 73 Query 62 GTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 G E+ T R R+ HAGGKS PDL R + APDAV++PG Sbjct 74 GPEHVHTDRRWRIEHAGGKSYPDLYRLRTGDASQAPDAVVVPG 116 >gi|262204224|ref|YP_003275432.1| alkylglycerone-phosphate synthase [Gordonia bronchialis DSM 43247] gi|262087571|gb|ACY23539.1| Alkylglycerone-phosphate synthase [Gordonia bronchialis DSM 43247] Length=540 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/104 (39%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+ WGDP L D R L + D P +DP V++ PS + A + + Sbjct 23 MRRPRWGDPNDPGHLPDAARLLATR-----DEPDPGVDPTGVEVSPSTIPAAVRAVIENV 77 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG E A +R+ H G STPDLLR + V DAPDAV+ PG Sbjct 78 VGAENLTVAAAERVQHTRGFSTPDLLRLRAGDVTDAPDAVVFPG 121 >gi|334564243|ref|ZP_08517234.1| putative alkylglycerone-phosphate synthase [Corynebacterium bovis DSM 20582] Length=531 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/105 (42%), Positives = 62/105 (60%), Gaps = 2/105 (1%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M ++ WG P A+PLS G+R +L ++G+ S + A V+L LS D AL + Sbjct 1 MAFNLWGTPDEARPLSPGIRRMLASLLGVDASRVRRVAAADVRLSDPRLSAEDIAALGAL 60 Query 61 VGTEYFRTADRD-RLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG ++ T DRD R+ A GKS+ DLL ++ GV APDAV+ PG Sbjct 61 VGPDHV-TCDRDQRMPRARGKSSLDLLEWREGGVVSAPDAVVAPG 104 >gi|304390886|ref|ZP_07372838.1| possible Alkylglycerone-phosphate synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325769|gb|EFL93015.1| possible Alkylglycerone-phosphate synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length=556 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/104 (40%), Positives = 56/104 (54%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+ + WG P +K LS V+ LL +++G+ + AQ +L P L AD AL I Sbjct 29 MEHNLWGTPDESKKLSASVQKLLHKLLGVGELTLHRRTTAQTELSPIRLGDADLAALGEI 88 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG Y T R+ A GKS PDL+ + V +APDAV+ PG Sbjct 89 VGPGYVTTDKEQRIRRARGKSYPDLVDWRMNRVIEAPDAVVAPG 132 >gi|315656330|ref|ZP_07909221.1| alkylglycerone-phosphate synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493332|gb|EFU82932.1| alkylglycerone-phosphate synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length=556 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/104 (40%), Positives = 56/104 (54%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+ + WG P +K LS V+ LL +++G+ + AQ +L P L AD AL I Sbjct 29 MEHNLWGTPDESKELSVSVQKLLHKLLGVGELTLHRRTTAQTELSPIRLGDADLAALGEI 88 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG Y T R+ A GKS PDL+ + V +APDAV+ PG Sbjct 89 VGPGYVTTDKEQRIRRARGKSYPDLVDWRMNRVIEAPDAVVAPG 132 >gi|336177359|ref|YP_004582734.1| Alkylglycerone-phosphate synthase [Frankia symbiont of Datisca glomerata] gi|334858339|gb|AEH08813.1| Alkylglycerone-phosphate synthase [Frankia symbiont of Datisca glomerata] Length=579 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 57/103 (56%), Gaps = 0/103 (0%) Query 3 WDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARIVG 62 W WG P A PL++ +RSLL+ +A + P + ++ L S+LS +ALA +VG Sbjct 16 WWGWGAPDAHTPLAEDIRSLLEAAFAVARQDTPPVGLDELHLPASSLSVEASEALAGVVG 75 Query 63 TEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGG 105 + R R+ G+ST DLLR + DAPDAV+LP G Sbjct 76 PAWVRVDAGSRVRRCRGRSTADLLRLRAGDALDAPDAVVLPAG 118 >gi|117164865|emb|CAJ88414.1| putative flavoprotein [Streptomyces ambofaciens ATCC 23877] Length=531 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/104 (40%), Positives = 55/104 (53%), Gaps = 1/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W+ WGDPA A PL D V LL++++G+ E + ++ + S L AL Sbjct 3 MLWNGWGDPARATPLPDTVTGLLRELLGVQPREAAAVPLEEIDVPASPLDEVARRALEDA 62 Query 61 VGTE-YFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 VG + RT R+ H GKSTPDLLR + D P AV+LP Sbjct 63 VGGPGHVRTDAEARIRHTRGKSTPDLLRMRAGDTADTPAAVVLP 106 >gi|298345329|ref|YP_003718016.1| putative alkylglycerone-phosphate synthase [Mobiluncus curtisii ATCC 43063] gi|298235390|gb|ADI66522.1| possible Alkylglycerone-phosphate synthase [Mobiluncus curtisii ATCC 43063] Length=528 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/104 (39%), Positives = 55/104 (53%), Gaps = 0/104 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M+ + WG P +K LS V+ LL +++G+ + AQ +L P L AD L I Sbjct 1 MEHNLWGTPDESKELSASVQKLLHKLLGVGELTLHRRTTAQTELSPIRLGDADLAELGEI 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPG 104 VG Y T R+ A GKS PDL+ + V +APDAV+ PG Sbjct 61 VGPGYVTTDKEQRIRRARGKSYPDLVDWRMNRVIEAPDAVVAPG 104 >gi|21219198|ref|NP_624977.1| flavoprotein [Streptomyces coelicolor A3(2)] gi|6434738|emb|CAB61185.1| putative flavoprotein [Streptomyces coelicolor A3(2)] Length=530 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/107 (40%), Positives = 54/107 (51%), Gaps = 2/107 (1%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W+ WGDPA A PL D V LL++++G+ L ++ + L AL Sbjct 1 MLWNGWGDPARATPLPDTVTGLLRELLGVTPRAAAPLPLEEIGVPAPPLDADARRALEAA 60 Query 61 VGTEY--FRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGG 105 VG RT R+ H GKSTPDLLR + V D P AV+LP G Sbjct 61 VGQRARDVRTDAESRIRHTRGKSTPDLLRMRAGDVTDTPAAVVLPDG 107 >gi|289773664|ref|ZP_06533042.1| flavoprotein [Streptomyces lividans TK24] gi|289703863|gb|EFD71292.1| flavoprotein [Streptomyces lividans TK24] Length=532 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/107 (40%), Positives = 54/107 (51%), Gaps = 2/107 (1%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W+ WGDPA A PL D V LL++++G+ L ++ + L AL Sbjct 3 MLWNGWGDPARATPLPDTVTGLLRELLGVTPRAAAPLPLEEIGVPAPPLDADARRALEAA 62 Query 61 VGTEY--FRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGG 105 VG RT R+ H GKSTPDLLR + V D P AV+LP G Sbjct 63 VGQRARDVRTDAESRIRHTRGKSTPDLLRMRAGDVTDTPAAVVLPDG 109 >gi|269126040|ref|YP_003299410.1| Alkylglycerone-phosphate synthase [Thermomonospora curvata DSM 43183] gi|268310998|gb|ACY97372.1| Alkylglycerone-phosphate synthase [Thermomonospora curvata DSM 43183] Length=528 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/103 (42%), Positives = 55/103 (54%), Gaps = 0/103 (0%) Query 1 MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI 60 M W+ WGDPA A PL V +LL ++G+ P + +V+L L G LA Sbjct 1 MAWNGWGDPARAAPLPQPVAALLHDLLGVRTPHTPSIPMGKVRLGAPRLPGEALTELAHA 60 Query 61 VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLP 103 VG + R R+ H GKSTPDLLR + DAPDAV+LP Sbjct 61 VGDAHVRADAESRIRHTRGKSTPDLLRIRAGDAADAPDAVVLP 103 Lambda K H 0.320 0.138 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131443546824 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40