BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2254c
Length=151
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609391|ref|NP_216770.1| integral membrane protein [Mycobact... 287 4e-76
gi|31793434|ref|NP_855927.1| integral membrane protein [Mycobact... 285 1e-75
gi|118619225|ref|YP_907557.1| hypothetical protein MUL_4027 [Myc... 99.4 2e-19
gi|183984135|ref|YP_001852426.1| hypothetical protein MMAR_4164 ... 97.8 5e-19
gi|296141762|ref|YP_003649005.1| lysine exporter LysE/YggA [Tsuk... 74.7 4e-12
gi|343925999|ref|ZP_08765514.1| hypothetical protein GOALK_050_0... 53.9 9e-06
gi|330469136|ref|YP_004406879.1| lysine exporter protein [Verruc... 49.3 2e-04
gi|254382875|ref|ZP_04998231.1| hypothetical protein SSAG_02534 ... 48.9 2e-04
gi|154150159|ref|YP_001403777.1| lysine exporter protein LysE/Yg... 48.5 4e-04
gi|119484284|ref|ZP_01618901.1| Putative LysE/RhtB family amino ... 45.8 0.002
gi|302868763|ref|YP_003837400.1| lysine exporter protein [Microm... 45.8 0.002
gi|163848618|ref|YP_001636662.1| lysine exporter protein LysE/Yg... 45.4 0.003
gi|332716544|ref|YP_004444010.1| lysine exporter protein [Agroba... 43.5 0.010
gi|219847375|ref|YP_002461808.1| lysine exporter LysE/YggA [Chlo... 42.7 0.018
gi|303248388|ref|ZP_07334648.1| Lysine exporter protein (LYSE/YG... 40.8 0.071
gi|294677440|ref|YP_003578055.1| lysine exporter protein (LYSE/Y... 40.8 0.074
gi|295703664|ref|YP_003596739.1| LysE family translocator protei... 40.4 0.077
gi|340527746|gb|AEK42951.1| hypothetical protein RAM_22355 [Amyc... 40.4 0.081
gi|134101364|ref|YP_001107025.1| hypothetical protein SACE_4835 ... 40.4 0.085
gi|300864719|ref|ZP_07109573.1| putative LysE/RhtB family amino ... 40.4 0.096
gi|300786272|ref|YP_003766563.1| hypothetical protein AMED_4390 ... 40.4 0.097
gi|258655191|ref|YP_003204347.1| lysine exporter protein LysE/Yg... 40.4 0.097
gi|257092891|ref|YP_003166532.1| lysine exporter protein LysE/Yg... 40.4 0.098
gi|34497170|ref|NP_901385.1| hypothetical protein CV_1715 [Chrom... 40.0 0.10
gi|206563446|ref|YP_002234209.1| LysE family transporter [Burkho... 40.0 0.11
gi|296131291|ref|YP_003638541.1| Lysine exporter protein (LYSE/Y... 40.0 0.12
gi|291009233|ref|ZP_06567206.1| hypothetical protein SeryN2_3233... 39.7 0.14
gi|145595594|ref|YP_001159891.1| lysine exporter protein LysE/Yg... 39.7 0.16
gi|332524656|ref|ZP_08400855.1| lysine exporter protein LysE/Ygg... 39.3 0.17
gi|309791508|ref|ZP_07686010.1| Putative LysE/RhtB family amino ... 39.3 0.19
gi|345445545|gb|AEN90562.1| Lysine exporter protein (LYSE/YGGA) ... 39.3 0.20
gi|254424865|ref|ZP_05038583.1| translocator protein, LysE famil... 38.9 0.24
gi|159038844|ref|YP_001538097.1| lysine exporter protein LysE/Yg... 38.9 0.26
gi|94314196|ref|YP_587405.1| putative threonine efflux protein [... 38.5 0.32
gi|251796698|ref|YP_003011429.1| lysine exporter (LYSE/YGGA) [Pa... 38.5 0.34
gi|294498314|ref|YP_003562014.1| LysE family translocator protei... 38.1 0.45
gi|222102766|ref|YP_002539805.1| hypothetical protein Avi_7458 [... 38.1 0.47
gi|254248352|ref|ZP_04941672.1| hypothetical protein BCPG_03182 ... 37.7 0.54
gi|182415841|ref|YP_001820907.1| lysine exporter protein LysE/Yg... 37.7 0.56
gi|311278379|ref|YP_003940610.1| homoserine/threonine efflux pum... 37.4 0.72
gi|163792543|ref|ZP_02186520.1| Putative LysE/RhtB family amino ... 37.0 0.99
gi|322370322|ref|ZP_08044881.1| hypothetical protein ZOD2009_125... 37.0 1.1
gi|288962393|ref|YP_003452688.1| lysine exporter protein [Azospi... 36.6 1.1
gi|209963779|ref|YP_002296694.1| translocator protein, LysE fami... 36.6 1.1
gi|209526651|ref|ZP_03275175.1| Lysine exporter protein (LYSE/YG... 36.2 1.6
gi|291565723|dbj|BAI87995.1| lysine exporter protein [Arthrospir... 36.2 1.6
gi|284050036|ref|ZP_06380246.1| Lysine exporter protein (LYSE/YG... 36.2 1.8
gi|119714778|ref|YP_921743.1| lysine exporter protein LysE/YggA ... 35.8 2.1
gi|134293687|ref|YP_001117423.1| lysine exporter protein LysE/Yg... 35.0 3.5
gi|238060112|ref|ZP_04604821.1| lysine exporter protein lysE/ygg... 35.0 4.1
>gi|15609391|ref|NP_216770.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15841746|ref|NP_336783.1| hypothetical protein MT2315 [Mycobacterium tuberculosis CDC1551]
gi|148662075|ref|YP_001283598.1| putative integral membrane protein [Mycobacterium tuberculosis
H37Ra]
72 more sequence titles
Length=151
Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/151 (99%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 LRYRDLETVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRF 60
+RYRDLETVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRF
Sbjct 1 MRYRDLETVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRF 60
Query 61 ALIFGLTAINPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRS 120
ALIFGLTAINPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRS
Sbjct 61 ALIFGLTAINPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRS 120
Query 121 RATARVRRMTVLAGNAVIAAFGAVLVVHAFA 151
RATARVRRMTVLAGNAVIAAFGAVLVVHAFA
Sbjct 121 RATARVRRMTVLAGNAVIAAFGAVLVVHAFA 151
>gi|31793434|ref|NP_855927.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|121638137|ref|YP_978361.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990631|ref|YP_002645318.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31619026|emb|CAD97131.1| Probable integral membrane protein [Mycobacterium bovis AF2122/97]
gi|121493785|emb|CAL72260.1| Probable integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773744|dbj|BAH26550.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602175|emb|CCC64849.1| probable integral membrane protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=151
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/151 (99%), Positives = 150/151 (99%), Gaps = 0/151 (0%)
Query 1 LRYRDLETVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRF 60
+RYRDLETVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRF
Sbjct 1 MRYRDLETVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRF 60
Query 61 ALIFGLTAINPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRS 120
ALIFGLT INPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRS
Sbjct 61 ALIFGLTVINPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRS 120
Query 121 RATARVRRMTVLAGNAVIAAFGAVLVVHAFA 151
RATARVRRMTVLAGNAVIAAFGAVLVVHAFA
Sbjct 121 RATARVRRMTVLAGNAVIAAFGAVLVVHAFA 151
>gi|118619225|ref|YP_907557.1| hypothetical protein MUL_4027 [Mycobacterium ulcerans Agy99]
gi|118571335|gb|ABL06086.1| conserved hypothetical integral membrane protein [Mycobacterium
ulcerans Agy99]
Length=210
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/140 (53%), Positives = 92/140 (66%), Gaps = 0/140 (0%)
Query 10 AAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRFALIFGLTAI 69
A P + L WPE++GA++L+V+AA GI GLR Q RFA FGLTAI
Sbjct 69 AGPAVEGLGSWPEVIGALLLVVVAAAGIARGLRRCEPATQHWQSPRSSDRFAFFFGLTAI 128
Query 70 NPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATARVRRM 129
NP T VYFTA+A TL ++L + AIAVV GV LASLLWQLLLV GA + + +TAR RR+
Sbjct 129 NPVTLVYFTAIAATLEQSLGGSAAIAVVTGVGLASLLWQLLLVWIGAVVGAGSTARTRRL 188
Query 130 TVLAGNAVIAAFGAVLVVHA 149
T+L GN V+ A G V++ A
Sbjct 189 TILVGNVVVGALGVVMLASA 208
>gi|183984135|ref|YP_001852426.1| hypothetical protein MMAR_4164 [Mycobacterium marinum M]
gi|183177461|gb|ACC42571.1| conserved hypothetical integral membrane protein [Mycobacterium
marinum M]
Length=210
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/140 (53%), Positives = 91/140 (65%), Gaps = 0/140 (0%)
Query 10 AAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRFALIFGLTAI 69
A P + L WPE++GA++L+V+AA GI GLR Q RFA FGLTAI
Sbjct 69 AGPAVEGLGSWPEVIGALLLVVVAAAGIARGLRRCEPATQHWQSPRSSNRFAFFFGLTAI 128
Query 70 NPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATARVRRM 129
NP T VYFTA+A TL ++L AIAVV GV LASLLWQLLLV GA + + +TAR RR+
Sbjct 129 NPVTLVYFTAIAATLEQSLGGGAAIAVVAGVGLASLLWQLLLVWIGAVVGAGSTARTRRL 188
Query 130 TVLAGNAVIAAFGAVLVVHA 149
T+L GN V+ A G V++ A
Sbjct 189 TILVGNVVVGALGVVMLASA 208
>gi|296141762|ref|YP_003649005.1| lysine exporter LysE/YggA [Tsukamurella paurometabola DSM 20162]
gi|296029896|gb|ADG80666.1| Lysine exporter protein (LYSE/YGGA) [Tsukamurella paurometabola
DSM 20162]
Length=213
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/147 (43%), Positives = 81/147 (56%), Gaps = 4/147 (2%)
Query 8 TVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLR---PSPEPVPAPQKQLGCVRFALIF 64
TV AP + WP VG ++LLV+AA+ + + R P EP A G RFAL F
Sbjct 66 TVVAPVVERWGRWPAAVGGVLLLVVAALTLRNAYRGRPPGEEPDGARPALTGLRRFALFF 125
Query 65 GLTAINPATFVYFTAVAVTLARALRATTAIAV-VVGVALASLLWQLLLVSAGAFLRSRAT 123
GLT INP +YF A+AV L L V +GV +ASL W +LV+ GA LRSR+T
Sbjct 126 GLTIINPMPLLYFLAIAVGLGSRLHEPAVAGVFALGVGIASLGWCQVLVAVGAALRSRST 185
Query 124 ARVRRMTVLAGNAVIAAFGAVLVVHAF 150
+R LAG ++A G +VV AF
Sbjct 186 EATQRRISLAGGIIVAICGVAVVVTAF 212
>gi|343925999|ref|ZP_08765514.1| hypothetical protein GOALK_050_02950 [Gordonia alkanivorans NBRC
16433]
gi|343764350|dbj|GAA12440.1| hypothetical protein GOALK_050_02950 [Gordonia alkanivorans NBRC
16433]
Length=207
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 61/119 (52%), Gaps = 5/119 (4%)
Query 24 VGAIVLLVIAAMGIGHGLRPSPEPVPA-PQKQLGCVR--FALIFGLTAINPATFVYFTA- 79
V +VLLV+ AM + G R A P + G + +FG+TAINPAT +YF A
Sbjct 77 VAGLVLLVLGAMMLRSGWRSRSGTTDAGPSRLFGTAGRAYVSVFGVTAINPATVIYFAAL 136
Query 80 VAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATA-RVRRMTVLAGNAV 137
VA A + A V+GV + S WQL+L + G+FL + R RR T + G +
Sbjct 137 VAGGAVVEPTAASGTAFVLGVLIGSAAWQLVLAAGGSFLGAALVGDRGRRWTAVIGGGL 195
>gi|330469136|ref|YP_004406879.1| lysine exporter protein [Verrucosispora maris AB-18-032]
gi|328812107|gb|AEB46279.1| lysine exporter protein [Verrucosispora maris AB-18-032]
Length=218
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/141 (35%), Positives = 67/141 (48%), Gaps = 15/141 (10%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVR--------FALIFGLTAINPAT 73
+V A VLL +A G LRP PA R FA I LT +NPAT
Sbjct 79 RLVAAAVLLGLAGYGAWRALRPRGSADPAAGVGRAARRGLDTPIRAFAGILALTLLNPAT 138
Query 74 FVYFTAVAVTLARALRATTAIAV----VVGVALASLLWQLLLVSAGAFL-RSRATARVRR 128
VYFT A+ L R + A+ +GV LAS WQLL+ + G + R R R
Sbjct 139 VVYFT--ALVLGRVELGGSGFALATLFTLGVFLASASWQLLIAAGGTMVGRVLTGVRGRL 196
Query 129 MTVLAGNAVIAAFGAVLVVHA 149
+T L+ +A+IAA ++++
Sbjct 197 VTALSSSAIIAALAVAMLLNG 217
>gi|254382875|ref|ZP_04998231.1| hypothetical protein SSAG_02534 [Streptomyces sp. Mg1]
gi|194341776|gb|EDX22742.1| hypothetical protein SSAG_02534 [Streptomyces sp. Mg1]
Length=233
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/83 (49%), Positives = 48/83 (58%), Gaps = 1/83 (1%)
Query 60 FALIFGLTAINPATFVYFTAVAVTLARALRATTAIAV-VVGVALASLLWQLLLVSAGAFL 118
FA GLTA+NP T +YF A+ ALRA A A V GVALASLLWQ LV+ GA
Sbjct 142 FARYVGLTAVNPTTALYFAALTTAQGAALRAGAAGAAFVTGVALASLLWQQALVALGALA 201
Query 119 RSRATARVRRMTVLAGNAVIAAF 141
SR + R T G ++AA+
Sbjct 202 GSRISPAARAWTFRLGYGLVAAY 224
>gi|154150159|ref|YP_001403777.1| lysine exporter protein LysE/YggA [Candidatus Methanoregula boonei
6A8]
gi|153998711|gb|ABS55134.1| Lysine exporter protein (LYSE/YGGA) [Methanoregula boonei 6A8]
Length=210
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/132 (32%), Positives = 61/132 (47%), Gaps = 8/132 (6%)
Query 23 IVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAV 82
+ G + L+V+ GI L PE PAP+ + ++ + +T NP T V+FT +
Sbjct 77 LFGGLALIVV---GIKIFLAGPPEISPAPESESFITDYSTMLAITLANPLTIVFFTIIIP 133
Query 83 TLARALRATTAIA---VVVGVALASLLWQLLLVSAGAFLRSRAT-ARVRRMTVLAGNAVI 138
L TT + V GV L + W + L +R T R+ + LAG VI
Sbjct 134 GFGVVLSGTTGVTPALFVTGVFLGEIGWWIFLCGTLGSMREYLTRERLHLINRLAGF-VI 192
Query 139 AAFGAVLVVHAF 150
AAFG V++ F
Sbjct 193 AAFGGVMIASLF 204
>gi|119484284|ref|ZP_01618901.1| Putative LysE/RhtB family amino acid efflux pump [Lyngbya sp.
PCC 8106]
gi|119457758|gb|EAW38881.1| Putative LysE/RhtB family amino acid efflux pump [Lyngbya sp.
PCC 8106]
Length=203
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/136 (30%), Positives = 67/136 (50%), Gaps = 9/136 (6%)
Query 18 RVWPEIVGAIVLLVIAAMGIGHGL-RPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVY 76
++W + +G + L +G+ L +P+ E + Q +G FA F LT NP T +
Sbjct 72 QIWFKSIGGLFL---CYLGLKTFLEKPAKEAATSTQ-SVGV--FASTFFLTITNPMTILS 125
Query 77 FTAVAVTLARALRATT--AIAVVVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAG 134
F A+ L A +T A+ +V+GV + S W LLL S + R + + R+ ++
Sbjct 126 FLAIFAGLGLATTSTNFDAVLLVLGVFMGSAFWWLLLASGVSLFREKFSDRILKIINRIS 185
Query 135 NAVIAAFGAVLVVHAF 150
+I AFG + +V F
Sbjct 186 GIIILAFGIIALVTGF 201
>gi|302868763|ref|YP_003837400.1| lysine exporter protein [Micromonospora aurantiaca ATCC 27029]
gi|302571622|gb|ADL47824.1| Lysine exporter protein (LYSE/YGGA) [Micromonospora aurantiaca
ATCC 27029]
Length=223
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (53%), Gaps = 3/85 (3%)
Query 60 FALIFGLTAINPATFVYFTAVAVTLARALRA--TTAIAVVVGVALASLLWQLLLVSAGAF 117
FA + LT +NPAT VYF A+ + L + A A GV LAS WQLL+ G
Sbjct 131 FAAVLALTLLNPATVVYFVALVLGRGDVLGSGPAGAAAFTAGVFLASASWQLLIAGGGTL 190
Query 118 L-RSRATARVRRMTVLAGNAVIAAF 141
+ R+ R RR+T L + +IAA
Sbjct 191 IGRALTGPRGRRVTALLSSVIIAAL 215
>gi|163848618|ref|YP_001636662.1| lysine exporter protein LysE/YggA [Chloroflexus aurantiacus J-10-fl]
gi|222526552|ref|YP_002571023.1| lysine exporter protein LysE/YggA [Chloroflexus sp. Y-400-fl]
gi|163669907|gb|ABY36273.1| Lysine exporter protein (LYSE/YGGA) [Chloroflexus aurantiacus
J-10-fl]
gi|222450431|gb|ACM54697.1| Lysine exporter protein (LYSE/YGGA) [Chloroflexus sp. Y-400-fl]
Length=205
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/106 (36%), Positives = 48/106 (46%), Gaps = 7/106 (6%)
Query 42 RPSP---EPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAV--AVTLARALRATTAIAV 96
RP P +P + LG + F LT NPAT + FT + + L A + +
Sbjct 93 RPDPVIAQPTITRRGLLGA--YLSTFFLTLTNPATILIFTVIFAGLGLGTAGNWLNGMTL 150
Query 97 VVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG 142
V GVA S LW LL S A +R R T V R+ L VI FG
Sbjct 151 VAGVAFGSALWWTLLSSGVALVRGRVTVPVLRVINLVSGLVIIGFG 196
>gi|332716544|ref|YP_004444010.1| lysine exporter protein [Agrobacterium sp. H13-3]
gi|325063229|gb|ADY66919.1| lysine exporter protein [Agrobacterium sp. H13-3]
Length=209
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (37%), Positives = 57/119 (48%), Gaps = 12/119 (10%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSPEPVPAP---QKQLGCVRFALIFGLTAINPATFVYFT 78
+IVG + +L + LRP P A + LG + F LT NP T + F
Sbjct 76 KIVGGLFMLWLGW----KSLRPKPLAEAAKVGARDLLGTIT--ATFFLTITNPMTILSFA 129
Query 79 AV--AVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSR-ATARVRRMTVLAG 134
A+ + LA A AT+A VV GV L SLLW +L AF R R T R ++ L+G
Sbjct 130 AIFAGLGLADASGATSAFFVVAGVFLGSLLWWFMLSGGVAFARQRLPTTFARWVSRLSG 188
>gi|219847375|ref|YP_002461808.1| lysine exporter LysE/YggA [Chloroflexus aggregans DSM 9485]
gi|219541634|gb|ACL23372.1| Lysine exporter protein (LYSE/YGGA) [Chloroflexus aggregans DSM
9485]
Length=202
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/106 (34%), Positives = 47/106 (45%), Gaps = 7/106 (6%)
Query 42 RPSP---EPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAVTLARALRAT--TAIAV 96
RP P P P + +G L LT NPAT V FT + L + A + +
Sbjct 93 RPQPVLERPEPTRRDLVGTYLSTLFLTLT--NPATIVIFTVIFAGLGLSTGAGMWEGVVL 150
Query 97 VVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG 142
V GV S LW LL + A +R R T + R+ + +IA FG
Sbjct 151 VCGVVSGSALWWTLLSGSVALVRGRVTTPMLRIVNIVSGVIIAGFG 196
>gi|303248388|ref|ZP_07334648.1| Lysine exporter protein (LYSE/YGGA) [Desulfovibrio fructosovorans
JJ]
gi|302490186|gb|EFL50104.1| Lysine exporter protein (LYSE/YGGA) [Desulfovibrio fructosovorans
JJ]
Length=203
Score = 40.8 bits (94), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/122 (36%), Positives = 57/122 (47%), Gaps = 11/122 (9%)
Query 37 IGHGLR-----PSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAVTLARAL--- 88
+G GLR +P+ P K+ FA IF LT NP T V F A+
Sbjct 83 VGMGLRLALSKTTPQAAETPPKKRYAGAFASIFLLTLTNPMTVVGFLAIFAGFGLGQVDA 142
Query 89 RATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG--AVLV 146
RA+ A AVV GV S++W + G LR R A +R + ++G +IA FG AV
Sbjct 143 RASEAGAVVAGVFCGSMIWWAAIAFGGKLLRLRLLAHMRSIKRVSG-WLIAVFGLWAVFF 201
Query 147 VH 148
H
Sbjct 202 AH 203
>gi|294677440|ref|YP_003578055.1| lysine exporter protein (LYSE/YGGA) [Rhodobacter capsulatus SB
1003]
gi|294476260|gb|ADE85648.1| lysine exporter protein (LYSE/YGGA) [Rhodobacter capsulatus SB
1003]
Length=207
Score = 40.8 bits (94), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/142 (31%), Positives = 63/142 (45%), Gaps = 24/142 (16%)
Query 3 YRDL-ETVAAPTINVLRVWPEIVGAIVLLVIAAMGI--GHGLRPSPEPVPAPQKQLGCVR 59
+ DL E +A P ++G L+V+A G G G PSP +P + G R
Sbjct 65 FNDLVERIAVPL--------GLIGGAFLMVLAWNGWPRGQGGEPSPAKIPEAR---GLWR 113
Query 60 FALI-FGLTAINPATFVYFTAV--AVTLARALRATTAIAVVVGVALASLLWQLLLVSAGA 116
+ +GLT NP T + F A+ + LA+ +A+V GV L S+ W L A
Sbjct 114 TTFVTYGLTITNPPTILLFAAIFAGLGLAQTGSGLAIVALVAGVFLGSIGWWAFLSGLVA 173
Query 117 FLRSR-------ATARVRRMTV 131
L R TARV +T+
Sbjct 174 ALHHRLPPAFALWTARVSSLTM 195
>gi|295703664|ref|YP_003596739.1| LysE family translocator protein [Bacillus megaterium DSM 319]
gi|294801323|gb|ADF38389.1| translocator protein, LysE family [Bacillus megaterium DSM 319]
Length=204
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/133 (29%), Positives = 61/133 (46%), Gaps = 16/133 (12%)
Query 18 RVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVR-FALIFGLTAINPATFVY 76
++W +++G + L + R P A K G +R + + LT NP T ++
Sbjct 72 KIWLQLIGGLFLCYLGV----QTFRSQPAEHAAAAKGGGLLRSYTSVLFLTVTNPMTILF 127
Query 77 FTAV--AVTLAR-ALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATAR----VRRM 129
F V V +++ A +A+ +V GV L S W L L A + RS+ T V R+
Sbjct 128 FIGVFSGVGISKSAFDVASALTMVTGVFLGSACWWLSLSFAISLARSKFTNNSLIWVNRI 187
Query 130 TVLAGNAVIAAFG 142
+ AV+ AFG
Sbjct 188 S----GAVVLAFG 196
>gi|340527746|gb|AEK42951.1| hypothetical protein RAM_22355 [Amycolatopsis mediterranei S699]
Length=205
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/62 (42%), Positives = 35/62 (57%), Gaps = 1/62 (1%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRFAL-IFGLTAINPATFVYFTAV 80
++ A +LLV+AA G +R P P P L R L + G+T +NPAT VYFTA+
Sbjct 75 RLLSAAILLVLAAHGAVRAVRSHRAPTPRPVSPLAPGRAYLSLLGITLVNPATVVYFTAL 134
Query 81 AV 82
V
Sbjct 135 VV 136
>gi|134101364|ref|YP_001107025.1| hypothetical protein SACE_4835 [Saccharopolyspora erythraea NRRL
2338]
gi|133913987|emb|CAM04100.1| hypothetical protein SACE_4835 [Saccharopolyspora erythraea NRRL
2338]
Length=160
Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/107 (37%), Positives = 52/107 (49%), Gaps = 5/107 (4%)
Query 45 PEPVPAPQKQLGCVR-FALIFGLTAINPATFVYFTAVAVTLARALRAT--TAIAVVVGVA 101
P+P + L R +A + +T +NP T +YF AV V ++ T + V
Sbjct 53 PQPDGRFEGSLSPARAYAALVAMTLLNPTTIIYFVAVVVGGQASIADTWPERLLFVAAAF 112
Query 102 LASLLWQLLLVSAGAFLRSRATARVRRM-TVLAGNAVIAAFGAVLVV 147
AS WQLL+ S GA L T R R+ T L +AVIA AVL V
Sbjct 113 TASASWQLLIASGGALLGRTLTGRRGRLGTALTSSAVIATL-AVLTV 158
>gi|300864719|ref|ZP_07109573.1| putative LysE/RhtB family amino acid efflux pump [Oscillatoria
sp. PCC 6506]
gi|300337285|emb|CBN54721.1| putative LysE/RhtB family amino acid efflux pump [Oscillatoria
sp. PCC 6506]
Length=202
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/112 (34%), Positives = 53/112 (48%), Gaps = 8/112 (7%)
Query 18 RVWPEIVGAIVLLVIAAMGIGHGL-RPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVY 76
+VW I+G I L +GI L +P+ A K L +A F LTA NP T +
Sbjct 72 QVWLRIIGGIFL---CYLGITTFLAKPAQSAAEATGKGL-IGAYASTFFLTATNPLTILS 127
Query 77 FTAVAVTLARALRATTAIA---VVVGVALASLLWQLLLVSAGAFLRSRATAR 125
F A+ L A + + +V+GV L S LW LLL + + LR + R
Sbjct 128 FAAIFAGLGVASAGSNYLDSGILVLGVFLGSALWWLLLSTGVSILRKKFDDR 179
>gi|300786272|ref|YP_003766563.1| hypothetical protein AMED_4390 [Amycolatopsis mediterranei U32]
gi|299795786|gb|ADJ46161.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=216
Score = 40.4 bits (93), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/62 (42%), Positives = 35/62 (57%), Gaps = 1/62 (1%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRFAL-IFGLTAINPATFVYFTAV 80
++ A +LLV+AA G +R P P P L R L + G+T +NPAT VYFTA+
Sbjct 86 RLLSAAILLVLAAHGAVRAVRSHRAPTPRPVSPLAPGRAYLSLLGITLVNPATVVYFTAL 145
Query 81 AV 82
V
Sbjct 146 VV 147
>gi|258655191|ref|YP_003204347.1| lysine exporter protein LysE/YggA [Nakamurella multipartita DSM
44233]
gi|258558416|gb|ACV81358.1| Lysine exporter protein (LYSE/YGGA) [Nakamurella multipartita
DSM 44233]
Length=209
Score = 40.4 bits (93), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/89 (36%), Positives = 46/89 (52%), Gaps = 4/89 (4%)
Query 63 IFGLTAINPATFVYFTAVAVTLARALRAT---TAIAVVVGVALASLLWQLLLVSAGAFLR 119
+ G+T +NP T +YF A+ + A T T + V+G AS WQL+LV+ G L
Sbjct 119 LLGITLLNPVTVLYFAALVLGSTAADLGTSWVTGLVFVLGAFCASASWQLVLVAGGVALG 178
Query 120 SRATARVRRM-TVLAGNAVIAAFGAVLVV 147
T R R+ T L A+I F VL++
Sbjct 179 RALTGRTGRLVTALISGALIIGFAVVLLL 207
>gi|257092891|ref|YP_003166532.1| lysine exporter protein LysE/YggA [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045415|gb|ACV34603.1| Lysine exporter protein (LYSE/YGGA) [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=205
Score = 40.4 bits (93), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/85 (38%), Positives = 40/85 (48%), Gaps = 2/85 (2%)
Query 43 PSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAVTLARALRAT--TAIAVVVGV 100
P+ P P FA +F LT NP T V F AV TLA + T A+ +V+GV
Sbjct 95 PAGAPTSLPDAAGSWRAFASVFVLTIANPMTIVSFIAVFATLAGDMAGTRPAAVVMVLGV 154
Query 101 ALASLLWQLLLVSAGAFLRSRATAR 125
S LW L L A +R R +R
Sbjct 155 LTGSALWWLALAFGVAAIRHRVGSR 179
>gi|34497170|ref|NP_901385.1| hypothetical protein CV_1715 [Chromobacterium violaceum ATCC
12472]
gi|34103027|gb|AAQ59390.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length=201
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/88 (40%), Positives = 40/88 (46%), Gaps = 3/88 (3%)
Query 43 PSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAVTLARALRATTA--IAVVVGV 100
P+ E + QLG + LT NP T V F AVA L+ L T A VV GV
Sbjct 91 PAREGAMDGESQLGRAYLGTLA-LTLSNPMTIVSFAAVAAGLSGGLPLTAAGQAQVVAGV 149
Query 101 ALASLLWQLLLVSAGAFLRSRATARVRR 128
S LW LLL G L SR + RR
Sbjct 150 FSGSALWWLLLAYGGGALLSRLGQQGRR 177
>gi|206563446|ref|YP_002234209.1| LysE family transporter [Burkholderia cenocepacia J2315]
gi|198039486|emb|CAR55453.1| LysE family transporter [Burkholderia cenocepacia J2315]
Length=210
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/116 (32%), Positives = 51/116 (44%), Gaps = 11/116 (9%)
Query 42 RPSPEPVPAPQKQLGCV----RFALIFGLTAINPATFVYFTAVAVTLA------RALRAT 91
R +P PA Q++L F FGLT NP T V F + L
Sbjct 89 RQAPA-APAGQRELPRTTVLRDFLTTFGLTLSNPMTIVSFVGIFAALGPLPGTQEGAMGA 147
Query 92 TAIAVVVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFGAVLVV 147
T ++V GV + S +W L L SA A LR+R + A++A FGA+ +V
Sbjct 148 TVGSMVAGVFIGSAMWWLCLSSASAALRTRLSFGFMHGLSRVSAAIVAGFGAIQLV 203
>gi|296131291|ref|YP_003638541.1| Lysine exporter protein (LYSE/YGGA) [Cellulomonas flavigena DSM
20109]
gi|296023106|gb|ADG76342.1| Lysine exporter protein (LYSE/YGGA) [Cellulomonas flavigena DSM
20109]
Length=218
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/105 (42%), Positives = 53/105 (51%), Gaps = 7/105 (6%)
Query 41 LRPSPE-PVPAPQKQLGCVR---FALIFGLTAINPATFVYFTAVAVTLARALRATTA--I 94
LRPS P PA G F L+ TA+NPAT VYF A+ A T A +
Sbjct 103 LRPSDAGPSPAAPDAPGMTPSRAFTLVVAATALNPATVVYFVALTSGAATTTLTTPAHRV 162
Query 95 AVVVGVALASLLWQLLLVSAGAFLRSRATA-RVRRMTVLAGNAVI 138
A V+ AS WQLLL SAGA+ +R T R RR T + G V+
Sbjct 163 AFVLAAFAASASWQLLLGSAGAWAGARLTGPRGRRWTAVVGALVV 207
>gi|291009233|ref|ZP_06567206.1| hypothetical protein SeryN2_32338 [Saccharopolyspora erythraea
NRRL 2338]
Length=207
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/107 (37%), Positives = 52/107 (49%), Gaps = 5/107 (4%)
Query 45 PEPVPAPQKQLGCVR-FALIFGLTAINPATFVYFTAVAVTLARALRAT--TAIAVVVGVA 101
P+P + L R +A + +T +NP T +YF AV V ++ T + V
Sbjct 100 PQPDGRFEGSLSPARAYAALVAMTLLNPTTIIYFVAVVVGGQASIADTWPERLLFVAAAF 159
Query 102 LASLLWQLLLVSAGAFLRSRATARVRRM-TVLAGNAVIAAFGAVLVV 147
AS WQLL+ S GA L T R R+ T L +AVIA AVL V
Sbjct 160 TASASWQLLIASGGALLGRTLTGRRGRLGTALTSSAVIATL-AVLTV 205
>gi|145595594|ref|YP_001159891.1| lysine exporter protein LysE/YggA [Salinispora tropica CNB-440]
gi|145304931|gb|ABP55513.1| Lysine exporter protein (LYSE/YGGA) [Salinispora tropica CNB-440]
Length=225
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/93 (38%), Positives = 47/93 (51%), Gaps = 3/93 (3%)
Query 60 FALIFGLTAINPATFVYFTAVAVTLARALRATTAIAV--VVGVALASLLWQLLLVSAGAF 117
FA + LT +NPAT VYF A+ + + A V+G LAS WQLL+ G
Sbjct 133 FAGVLALTLLNPATVVYFAALVLGRQDSAAPALPAAGAFVLGAFLASASWQLLIAGGGTL 192
Query 118 L-RSRATARVRRMTVLAGNAVIAAFGAVLVVHA 149
+ R A R R T L +A+IAA ++V A
Sbjct 193 VGRILAGPRGRLGTALVSSAIIAALAVFMLVAA 225
>gi|332524656|ref|ZP_08400855.1| lysine exporter protein LysE/YggA [Rubrivivax benzoatilyticus
JA2]
gi|332107964|gb|EGJ09188.1| lysine exporter protein LysE/YggA [Rubrivivax benzoatilyticus
JA2]
Length=205
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/82 (40%), Positives = 40/82 (49%), Gaps = 0/82 (0%)
Query 60 FALIFGLTAINPATFVYFTAVAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLR 119
FA F LT NP T + F AV LA + +V GVA S LW +L A LR
Sbjct 114 FAGTFVLTLANPTTILSFIAVFGALAGRSAVASPWVMVAGVAAGSALWWFILAGAVGRLR 173
Query 120 SRATARVRRMTVLAGNAVIAAF 141
+R AR + LA A++A F
Sbjct 174 TRFDARWQHRVNLASAALLAGF 195
>gi|309791508|ref|ZP_07686010.1| Putative LysE/RhtB family amino acid efflux pump [Oscillochloris
trichoides DG6]
gi|308226433|gb|EFO80159.1| Putative LysE/RhtB family amino acid efflux pump [Oscillochloris
trichoides DG6]
Length=229
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/142 (39%), Positives = 65/142 (46%), Gaps = 10/142 (7%)
Query 8 TVAAPTINVLRVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVRFAL-IFGL 66
T A + + W +VG I L + H LR P PA G L F L
Sbjct 86 TAVANLLTGVSFWTRLVGGIFLCYLGL----HTLRERPAERPAAANARGLWGAYLSTFAL 141
Query 67 TAINPATFVYFTAVAVTLARALRAT---TAIAVVVGVALASLLWQLLLVSAGAFLRSRAT 123
T NPAT + F AV + A I +V+GV S LW LLL S + LRSR T
Sbjct 142 TITNPATILSFAAVFAGMGAASGVAGYADGIMLVLGVFSGSALWWLLLSSGVSLLRSRVT 201
Query 124 ARV-RRMTVLAGNAVIAAFGAV 144
RV R + VLAG +I AFG V
Sbjct 202 PRVLRGVNVLAG-LIILAFGLV 222
>gi|345445545|gb|AEN90562.1| Lysine exporter protein (LYSE/YGGA) [Bacillus megaterium WSH-002]
Length=204
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/133 (28%), Positives = 60/133 (46%), Gaps = 16/133 (12%)
Query 18 RVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVR-FALIFGLTAINPATFVY 76
++W +++G + L + R P A K G +R + + LT NP T ++
Sbjct 72 KIWLQLIGGLFLCYLGV----QTFRSQPAEHAAAAKGEGLLRSYTSVLFLTVTNPMTILF 127
Query 77 FTAV--AVTLAR-ALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATAR----VRRM 129
F V V +++ A +A+ +V GV L S W L L A + RS+ T V R+
Sbjct 128 FIGVFSGVGISKSAFDVASALTMVAGVFLGSACWWLSLSFAISLARSKFTNNSLIWVNRI 187
Query 130 TVLAGNAVIAAFG 142
+ AV+ FG
Sbjct 188 S----GAVVLTFG 196
>gi|254424865|ref|ZP_05038583.1| translocator protein, LysE family [Synechococcus sp. PCC 7335]
gi|196192354|gb|EDX87318.1| translocator protein, LysE family [Synechococcus sp. PCC 7335]
Length=221
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/85 (37%), Positives = 42/85 (50%), Gaps = 5/85 (5%)
Query 70 NPATFVYFTAVAVTLARALRAT-TAIAVVVGVALASLLWQLLLVSAGAFLRSRATA---- 124
NPAT + F A+ L A ++ +V GV S+LW L+LVS A+LR R T
Sbjct 136 NPATILSFVAIFAGLGITQSAYLDSVTLVFGVFTGSILWWLVLVSGVAYLRDRLTPERLF 195
Query 125 RVRRMTVLAGNAVIAAFGAVLVVHA 149
R R + +I FG V +V A
Sbjct 196 RFNRFSSRVFGLLIIGFGVVALVSA 220
>gi|159038844|ref|YP_001538097.1| lysine exporter protein LysE/YggA [Salinispora arenicola CNS-205]
gi|157917679|gb|ABV99106.1| Lysine exporter protein (LYSE/YGGA) [Salinispora arenicola CNS-205]
Length=237
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/85 (39%), Positives = 44/85 (52%), Gaps = 7/85 (8%)
Query 60 FALIFGLTAINPATFVYFTAVAVTLARALRATTAIAV----VVGVALASLLWQLLLVSAG 115
FA + LT +NPAT VYF A+ L R A A+++ V+G LAS WQLL+ G
Sbjct 140 FAGVLALTLLNPATVVYF--AALVLGRQDSAAPALSIAGAFVLGAFLASASWQLLVAGGG 197
Query 116 AFL-RSRATARVRRMTVLAGNAVIA 139
+ R R R T L + +IA
Sbjct 198 TLVGRILTGPRGRLGTALVSSTIIA 222
>gi|94314196|ref|YP_587405.1| putative threonine efflux protein [Cupriavidus metallidurans
CH34]
gi|93358048|gb|ABF12136.1| putative threonine efflux protein [Cupriavidus metallidurans
CH34]
Length=205
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/103 (32%), Positives = 45/103 (44%), Gaps = 2/103 (1%)
Query 42 RPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAVTLA--RALRATTAIAVVVG 99
+P+ + G F LT NP T + F A+ TLA A A+ V+G
Sbjct 95 KPTDQAATLNSNGYGARAFGSALLLTLTNPQTIIMFAALFATLAPRGAFSTPIAMTTVLG 154
Query 100 VALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG 142
V S+LW +LV+ + R RVR+ A +AAFG
Sbjct 155 VFCGSILWWCVLVTIVSGARHALGMRVRQWIDRAAGVALAAFG 197
>gi|251796698|ref|YP_003011429.1| lysine exporter (LYSE/YGGA) [Paenibacillus sp. JDR-2]
gi|247544324|gb|ACT01343.1| Lysine exporter protein (LYSE/YGGA) [Paenibacillus sp. JDR-2]
Length=204
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/142 (30%), Positives = 67/142 (48%), Gaps = 12/142 (8%)
Query 15 NVL---RVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVR-FALIFGLTAIN 70
NVL R+W +++G + L + +R P Q G R + F LT N
Sbjct 63 NVLVDQRIWIQLIGGLFLCYLGY----QSVRALPNSGKELQLNNGLARAYLTTFLLTLTN 118
Query 71 PATFVYFTAVAVTLARALRAT--TAIAVVVGVALASLLWQLLLVSAGAFLRSRATAR-VR 127
P T + F A+ + + AT ++ +V+G+ L S+LW LLL +R+ A +R
Sbjct 119 PMTILSFAAIFAGIQHSAEATAGDSLLLVLGIFLGSMLWWLLLAGLVGVIRTALNAMAMR 178
Query 128 RMTVLAGNAVIAAFGAVLVVHA 149
+ VL+G V+ FG +V A
Sbjct 179 WINVLSG-IVLLVFGVWSLVSA 199
>gi|294498314|ref|YP_003562014.1| LysE family translocator protein [Bacillus megaterium QM B1551]
gi|294348251|gb|ADE68580.1| translocator protein, LysE family [Bacillus megaterium QM B1551]
Length=204
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/133 (28%), Positives = 60/133 (46%), Gaps = 16/133 (12%)
Query 18 RVWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCVR-FALIFGLTAINPATFVY 76
++W +++G + L + R P A K G +R + + LT NP T ++
Sbjct 72 KIWLQLIGGLFLCYLGV----QTFRSQPAEHAAAAKGGGLLRSYTSVLFLTVTNPMTILF 127
Query 77 FTAV--AVTLARA-LRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATAR----VRRM 129
F V V ++++ +A+ +V GV L S W L L A + RS+ T V R+
Sbjct 128 FIGVFSGVGISKSVFDVASALTMVAGVFLGSACWWLSLSFAISLARSKFTNNSLIWVNRI 187
Query 130 TVLAGNAVIAAFG 142
+ AV+ FG
Sbjct 188 S----GAVVLTFG 196
>gi|222102766|ref|YP_002539805.1| hypothetical protein Avi_7458 [Agrobacterium vitis S4]
gi|221739367|gb|ACM40100.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length=203
Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/81 (38%), Positives = 36/81 (45%), Gaps = 2/81 (2%)
Query 64 FGLTAINPATFVYFTAV--AVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSR 121
F LT NP T + F A+ + LA A T A VV GV L SLLW LL A R R
Sbjct 115 FFLTITNPVTILSFAAIFAGLGLADASGTTNAFFVVAGVFLGSLLWWFLLSGGIALARQR 174
Query 122 ATARVRRMTVLAGNAVIAAFG 142
R ++ +FG
Sbjct 175 LPPSFARWVSCLSGLILISFG 195
>gi|254248352|ref|ZP_04941672.1| hypothetical protein BCPG_03182 [Burkholderia cenocepacia PC184]
gi|124874853|gb|EAY64843.1| hypothetical protein BCPG_03182 [Burkholderia cenocepacia PC184]
Length=223
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/95 (36%), Positives = 45/95 (48%), Gaps = 8/95 (8%)
Query 60 FALIFGLTAINPATFVYFTAVAVTLA-------RALRATTAIAVVVGVALASLLWQLLLV 112
F FGLT NP T V F + L A+ AT A +V GV + S +W L L
Sbjct 123 FLTTFGLTLSNPMTIVSFVGIFAALGPLPGAREGAMWATVAW-MVAGVFIGSAMWWLCLS 181
Query 113 SAGAFLRSRATARVRRMTVLAGNAVIAAFGAVLVV 147
SA A LR++ + AV+A FGA+ +V
Sbjct 182 SASAALRTKLSFAFMHGLSRVSAAVVAVFGAIQLV 216
>gi|182415841|ref|YP_001820907.1| lysine exporter protein LysE/YggA [Opitutus terrae PB90-1]
gi|177843055|gb|ACB77307.1| Lysine exporter protein (LYSE/YGGA) [Opitutus terrae PB90-1]
Length=207
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/83 (38%), Positives = 42/83 (51%), Gaps = 3/83 (3%)
Query 64 FGLTAINPATFVYFTAVAVTLARALRA---TTAIAVVVGVALASLLWQLLLVSAGAFLRS 120
F LT NPAT + F A+ L + A T A +V GV L S +W LLL + +L +
Sbjct 114 FALTLANPATVLAFVAIFAGLGIGVTASGVTPAAVLVAGVFLGSAVWWLLLSTGANWLGT 173
Query 121 RATARVRRMTVLAGNAVIAAFGA 143
+ A + LA +IA FGA
Sbjct 174 KVGAHRLHVINLASGTLIALFGA 196
>gi|311278379|ref|YP_003940610.1| homoserine/threonine efflux pump [Enterobacter cloacae SCF1]
gi|308747574|gb|ADO47326.1| homoserine/threonine efflux pump [Enterobacter cloacae SCF1]
Length=210
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/137 (31%), Positives = 67/137 (49%), Gaps = 16/137 (11%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSPE------PVPAPQKQLGCVRFALIFGLTAINPATFV 75
+IVG LL A + +PSP+ P+ AP +R L+ L+ NP T +
Sbjct 77 KIVGGGYLLWFAIKSMKR--QPSPQSSALLQPIAAPWHVF--LRSGLLTCLS--NPQTVL 130
Query 76 YFTAV-AVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAF--LRSRATARVRRMTVL 132
+F ++ +VTL+ A + G+ L+S++W+L L A + +R R ARV+R+
Sbjct 131 FFISIFSVTLSAATPTWAKLLAWCGIVLSSVIWRLFLSQAFSLPAVR-RGYARVQRIASR 189
Query 133 AGNAVIAAFGAVLVVHA 149
A AVI F L+
Sbjct 190 AIGAVIGVFALKLIYEG 206
>gi|163792543|ref|ZP_02186520.1| Putative LysE/RhtB family amino acid efflux pump [alpha proteobacterium
BAL199]
gi|159182248|gb|EDP66757.1| Putative LysE/RhtB family amino acid efflux pump [alpha proteobacterium
BAL199]
Length=220
Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/91 (37%), Positives = 41/91 (46%), Gaps = 5/91 (5%)
Query 66 LTAINPATFVYFTAVAVTLARALRATT----AIAVVVGVALASLLWQLLLVSA-GAFLRS 120
LTA NP T + F A+ L A A A A+V+GV L S W L+L LR
Sbjct 128 LTAGNPQTVLTFVALFAGLGLATSADAGWQRAGALVLGVFLGSAGWWLVLAGGVAGLLRG 187
Query 121 RATARVRRMTVLAGNAVIAAFGAVLVVHAFA 151
R + R AVIA FGA+ + F
Sbjct 188 RLSGRRMLWINRGAGAVIAGFGAIAIARGFG 218
>gi|322370322|ref|ZP_08044881.1| hypothetical protein ZOD2009_12562 [Haladaptatus paucihalophilus
DX253]
gi|320550030|gb|EFW91685.1| hypothetical protein ZOD2009_12562 [Haladaptatus paucihalophilus
DX253]
Length=164
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/91 (38%), Positives = 44/91 (49%), Gaps = 5/91 (5%)
Query 56 GCVR-FALIFGLTAINPATFVYFTAVAVTLARALRA--TTAIAVVVGVALASLLWQLLLV 112
G VR + F LT NP T + F + L + T A A+V GV L S LW L
Sbjct 67 GLVRDYGSTFLLTITNPVTILAFVGIFTGLGVGVSGNDTDAAALVGGVFLGSALWWFALS 126
Query 113 SAGAFLRSR-ATARVRRMTVLAGNAVIAAFG 142
SA R+R + +RR+ LAG +I FG
Sbjct 127 SAVGHFRTRFGRSTMRRVNRLAG-VIIVGFG 156
>gi|288962393|ref|YP_003452688.1| lysine exporter protein [Azospirillum sp. B510]
gi|288914659|dbj|BAI76144.1| lysine exporter protein [Azospirillum sp. B510]
Length=217
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/128 (30%), Positives = 52/128 (41%), Gaps = 11/128 (8%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSP-----EPVPAPQKQLGCVRFALIFGLTAINPATFVY 76
++VG I LLV+A R P E AP + F LT NPAT +
Sbjct 77 QLVGGIFLLVVAV----RTFRQQPDAEEREAASAPDTKSWLAGFMTGLSLTLTNPATIMA 132
Query 77 FTAV--AVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAG 134
F A+ L L A +V+GV + + LW + L A +R R + R M
Sbjct 133 FIAIFAGFGLGGTLSRLEASTLVLGVFIGASLWWMTLSMGVAAVRHRISDRGLTMLNHCT 192
Query 135 NAVIAAFG 142
+ AFG
Sbjct 193 GVALGAFG 200
>gi|209963779|ref|YP_002296694.1| translocator protein, LysE family protein [Rhodospirillum centenum
SW]
gi|209957245|gb|ACI97881.1| translocator protein, LysE family protein [Rhodospirillum centenum
SW]
Length=209
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (31%), Positives = 37/84 (45%), Gaps = 3/84 (3%)
Query 42 RPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAVAVTLARALRATTAIAVVVGVA 101
RP P P + LG L LT NP T + TA+ V + L A+ +V G+
Sbjct 98 RP-PAQEPEARNLLGATGSGLA--LTMGNPVTILGITALVVGFSGGLETYQAVTLVAGIF 154
Query 102 LASLLWQLLLVSAGAFLRSRATAR 125
+ S +W +L +R R T R
Sbjct 155 VGSGIWWFILCGGVTLVRHRITRR 178
>gi|209526651|ref|ZP_03275175.1| Lysine exporter protein (LYSE/YGGA) [Arthrospira maxima CS-328]
gi|209492887|gb|EDZ93218.1| Lysine exporter protein (LYSE/YGGA) [Arthrospira maxima CS-328]
Length=203
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/103 (31%), Positives = 44/103 (43%), Gaps = 5/103 (4%)
Query 42 RPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAV--AVTLARALRATTAIAVVVG 99
+P+ E K LG +A F LT NP T + F + + L A A +V+G
Sbjct 94 KPANESAQINHK-LGA--YASTFLLTLTNPMTILGFIGIFSGLGLGEANNYFDATLLVLG 150
Query 100 VALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG 142
V S LW LLLV R R + + + +I +FG
Sbjct 151 VFFGSALWWLLLVGFIELFRDRLNSTIFQWVNRVSGLIIISFG 193
>gi|291565723|dbj|BAI87995.1| lysine exporter protein [Arthrospira platensis NIES-39]
Length=203
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/105 (31%), Positives = 45/105 (43%), Gaps = 5/105 (4%)
Query 40 GLRPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAV--AVTLARALRATTAIAVV 97
G +P+ E K LG +A F LT NP T + F A+ + L A +V
Sbjct 92 GDKPANESAKINHK-LGA--YASTFLLTLTNPMTILGFIAIFSGLGLGETNNYFDATLLV 148
Query 98 VGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG 142
+GV S LW LLLV R R + + + +I +FG
Sbjct 149 LGVFWGSALWWLLLVGFIELFRDRLNSTIFQWVNRVSGLIIISFG 193
>gi|284050036|ref|ZP_06380246.1| Lysine exporter protein (LYSE/YGGA) [Arthrospira platensis str.
Paraca]
Length=200
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/106 (31%), Positives = 45/106 (43%), Gaps = 5/106 (4%)
Query 39 HGLRPSPEPVPAPQKQLGCVRFALIFGLTAINPATFVYFTAV--AVTLARALRATTAIAV 96
G +P+ E K LG +A F LT NP T + F A+ + L A +
Sbjct 88 FGDKPANESAKINHK-LGA--YASTFLLTLTNPMTILGFIAIFSGLGLGETNNYFDATLL 144
Query 97 VVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFG 142
V+GV S LW LLLV R R + + + +I +FG
Sbjct 145 VLGVFWGSALWWLLLVGFIELFRDRLNSTIFQWVNRVSGLIIISFG 190
>gi|119714778|ref|YP_921743.1| lysine exporter protein LysE/YggA [Nocardioides sp. JS614]
gi|119535439|gb|ABL80056.1| Lysine exporter protein (LYSE/YGGA) [Nocardioides sp. JS614]
Length=202
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/91 (38%), Positives = 47/91 (52%), Gaps = 8/91 (8%)
Query 22 EIVGAIVLLVIAAMGIGHGLRPSPE--PVPAPQKQLGCVRFALIFGLTAINPATFVYFTA 79
I +VLL +A + H LR + VP+ + + +A+ G+TA+NP T VYF A
Sbjct 75 SIASGLVLLGVAGLTAAHALRSAGRVREVPSLRPR---TAYAMFLGITAVNPTTVVYFAA 131
Query 80 VAVTLARALRATTAIAVVVGVA--LASLLWQ 108
V V + L A A VV +A LAS WQ
Sbjct 132 V-VLGNQGLVAGPAEGVVFVLAAFLASASWQ 161
>gi|134293687|ref|YP_001117423.1| lysine exporter protein LysE/YggA [Burkholderia vietnamiensis
G4]
gi|134136844|gb|ABO57958.1| Lysine exporter protein (LYSE/YGGA) [Burkholderia vietnamiensis
G4]
Length=212
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/112 (32%), Positives = 48/112 (43%), Gaps = 12/112 (10%)
Query 47 PVPAPQKQL----GCVRFALIFGLTAINPATFVYFTAVAVTLA-------RALRATTAIA 95
P PA + +L F FGLT NP T + F + L +RAT A+
Sbjct 93 PAPAARAELPRTTALRDFVTTFGLTLSNPMTILSFVGIFAALGPLAGAHDSGMRATVAM- 151
Query 96 VVVGVALASLLWQLLLVSAGAFLRSRATARVRRMTVLAGNAVIAAFGAVLVV 147
+V GV + S W L L A LR+R + VIA FGA+ ++
Sbjct 152 MVGGVFVGSAAWWLCLSGTSAALRTRMPPALMYALARVSAVVIAGFGAIQLI 203
>gi|238060112|ref|ZP_04604821.1| lysine exporter protein lysE/yggA [Micromonospora sp. ATCC 39149]
gi|237881923|gb|EEP70751.1| lysine exporter protein lysE/yggA [Micromonospora sp. ATCC 39149]
Length=259
Score = 35.0 bits (79), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/76 (41%), Positives = 39/76 (52%), Gaps = 3/76 (3%)
Query 60 FALIFGLTAINPATFVYFTA--VAVTLARALRATTAIAVVVGVALASLLWQLLLVSAGAF 117
FA + LT +NPAT VYF A +A A+A V G LAS WQLL+ G
Sbjct 167 FAGLLALTMLNPATMVYFAALVLAGNDGAEAGPAVAVAFVAGAFLASASWQLLVAGGGTV 226
Query 118 L-RSRATARVRRMTVL 132
+ R+ R RR+T L
Sbjct 227 VGRALTGPRGRRVTGL 242
Lambda K H
0.330 0.139 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128896424032
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40