BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2275
Length=289
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609412|ref|NP_216791.1| hypothetical protein Rv2275 [Mycoba... 596 1e-168
gi|121638157|ref|YP_978381.1| hypothetical protein BCG_2292 [Myc... 594 5e-168
gi|340627281|ref|YP_004745733.1| hypothetical protein MCAN_22991... 594 7e-168
gi|339295187|gb|AEJ47298.1| hypothetical protein CCDC5079_2108 [... 588 4e-166
gi|307567945|pdb|2X9Q|A Chain A, Structure Of The Mycobacterium ... 583 1e-164
gi|308232085|ref|ZP_07414869.2| hypothetical protein TMAG_00468 ... 577 8e-163
gi|289570394|ref|ZP_06450621.1| conserved hypothetical protein [... 442 3e-122
gi|167968224|ref|ZP_02550501.1| hypothetical protein MtubH3_0939... 363 2e-98
gi|289750875|ref|ZP_06510253.1| conserved hypothetical protein [... 313 2e-83
gi|328881912|emb|CCA55151.1| hypothetical protein SVEN_1864 [Str... 259 3e-67
gi|289443787|ref|ZP_06433531.1| conserved hypothetical protein [... 209 4e-52
gi|337768251|emb|CCB76964.1| protein of unknown function [Strept... 139 5e-31
gi|256378646|ref|YP_003102306.1| hypothetical protein Amir_4627 ... 139 6e-31
gi|323463044|pdb|3OQV|A Chain A, Albc, A Cyclodipeptide Synthase... 134 1e-29
gi|27447466|gb|AAN07909.1| AlbC [Streptomyces noursei ATCC 11455] 134 1e-29
gi|297560121|ref|YP_003679095.1| hypothetical protein Ndas_1148 ... 128 1e-27
gi|302524569|ref|ZP_07276911.1| predicted protein [Streptomyces ... 119 4e-25
gi|337764924|emb|CCB73633.1| conserved protein of unknown functi... 114 2e-23
gi|337764227|emb|CCB72936.1| conserved protein of unknown functi... 111 1e-22
gi|297197460|ref|ZP_06914857.1| predicted protein [Streptomyces ... 102 5e-20
gi|326793595|ref|YP_004311415.1| hypothetical protein Marme_0276... 95.9 7e-18
gi|302529819|ref|ZP_07282161.1| predicted protein [Streptomyces ... 89.4 6e-16
gi|344925056|ref|ZP_08778517.1| hypothetical protein COdytL_1046... 87.8 2e-15
gi|229187741|ref|ZP_04314876.1| hypothetical protein bcere0004_5... 87.8 2e-15
gi|296330285|ref|ZP_06872766.1| hypothetical protein BSU6633_042... 86.7 4e-15
gi|228988985|ref|ZP_04149016.1| hypothetical protein bthur0001_5... 86.3 6e-15
gi|228905252|ref|ZP_04069243.1| hypothetical protein bthur0014_6... 84.0 2e-14
gi|37524314|ref|NP_927658.1| hypothetical protein plu0297 [Photo... 83.2 4e-14
gi|323714500|pdb|3OQH|A Chain A, Crystal Structure Of B. Licheni... 82.0 8e-14
gi|52081867|ref|YP_080658.1| hypothetical protein BL00817 [Bacil... 82.0 9e-14
gi|16080560|ref|NP_391387.1| hypothetical protein BSU35070 [Baci... 82.0 1e-13
gi|340708270|pdb|3S7T|A Chain A, Crystal Structure Of Semet B. L... 79.7 4e-13
gi|75758511|ref|ZP_00738632.1| Hypothetical protein RBTH_07362 [... 79.0 8e-13
gi|68535056|ref|YP_254604.1| hypothetical protein pSHaeC06 [Stap... 79.0 9e-13
gi|323714503|pdb|3OQI|B Chain B, Crystal Structure Of B. Licheni... 77.8 2e-12
gi|319892997|ref|YP_004149872.1| YvmC [Staphylococcus pseudinter... 70.1 4e-10
gi|294013248|ref|YP_003546708.1| hypothetical protein SJA_C1-326... 61.6 1e-07
gi|344924850|ref|ZP_08778311.1| hypothetical protein COdytL_0941... 46.6 0.005
gi|340506300|gb|EGR32470.1| hypothetical protein IMG5_081850 [Ic... 45.1 0.011
gi|344924849|ref|ZP_08778310.1| hypothetical protein COdytL_0941... 42.0 0.11
gi|68536000|ref|YP_250705.1| hypothetical protein jk0923 [Coryne... 38.5 1.1
gi|242820335|ref|XP_002487489.1| cell wall glucanase (Scw11), pu... 36.6 5.2
gi|220917871|ref|YP_002493175.1| methyl-accepting chemotaxis sen... 35.4 9.7
>gi|15609412|ref|NP_216791.1| hypothetical protein Rv2275 [Mycobacterium tuberculosis H37Rv]
gi|15841768|ref|NP_336805.1| hypothetical protein MT2335 [Mycobacterium tuberculosis CDC1551]
gi|31793454|ref|NP_855947.1| hypothetical protein Mb2298 [Mycobacterium bovis AF2122/97]
29 more sequence titles
Length=289
Score = 596 bits (1537), Expect = 1e-168, Method: Compositional matrix adjust.
Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%)
Query 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA
Sbjct 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
Query 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV
Sbjct 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
Query 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR
Sbjct 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
Query 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT
Sbjct 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
Query 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
>gi|121638157|ref|YP_978381.1| hypothetical protein BCG_2292 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990651|ref|YP_002645338.1| hypothetical protein JTY_2286 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121493805|emb|CAL72280.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773764|dbj|BAH26570.1| hypothetical protein JTY_2286 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602195|emb|CCC64869.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=289
Score = 594 bits (1531), Expect = 5e-168, Method: Compositional matrix adjust.
Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%)
Query 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA
Sbjct 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
Query 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV
Sbjct 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
Query 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR
Sbjct 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
Query 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT
Sbjct 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
Query 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
PAILGVPSSLNCYHQSLPLA MLYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 241 PAILGVPSSLNCYHQSLPLAAMLYARGSGLRASRNQGHAIVTPDGSPAE 289
>gi|340627281|ref|YP_004745733.1| hypothetical protein MCAN_22991 [Mycobacterium canettii CIPT
140010059]
gi|340005471|emb|CCC44631.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=289
Score = 594 bits (1531), Expect = 7e-168, Method: Compositional matrix adjust.
Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%)
Query 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGT DDSAPNSRFQLGRRIPEATA
Sbjct 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTTDDSAPNSRFQLGRRIPEATA 60
Query 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV
Sbjct 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
Query 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR
Sbjct 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
Query 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT
Sbjct 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
Query 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
>gi|339295187|gb|AEJ47298.1| hypothetical protein CCDC5079_2108 [Mycobacterium tuberculosis
CCDC5079]
gi|339298807|gb|AEJ50917.1| hypothetical protein CCDC5180_2080 [Mycobacterium tuberculosis
CCDC5180]
Length=286
Score = 588 bits (1515), Expect = 4e-166, Method: Compositional matrix adjust.
Identities = 285/286 (99%), Positives = 286/286 (100%), Gaps = 0/286 (0%)
Query 4 VAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEG 63
+AAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEG
Sbjct 1 MAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEG 60
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA
Sbjct 61 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 120
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 183
ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH
Sbjct 121 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 180
Query 184 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAI 243
ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAI
Sbjct 181 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAI 240
Query 244 LGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
LGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 241 LGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 286
>gi|307567945|pdb|2X9Q|A Chain A, Structure Of The Mycobacterium Tuberculosis Protein,
Rv2275, Demonstrates That Cyclodipeptide Synthetases Are Related
To Type I Trna-Synthetases.
gi|307567946|pdb|2X9Q|B Chain B, Structure Of The Mycobacterium Tuberculosis Protein,
Rv2275, Demonstrates That Cyclodipeptide Synthetases Are Related
To Type I Trna-Synthetases.
Length=289
Score = 583 bits (1502), Expect = 1e-164, Method: Compositional matrix adjust.
Identities = 284/288 (99%), Positives = 284/288 (99%), Gaps = 0/288 (0%)
Query 2 SYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQ 61
SYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQ
Sbjct 2 SYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQ 61
Query 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH
Sbjct 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
Query 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRP SEFQSNEAYRE
Sbjct 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPXSEFQSNEAYRE 181
Query 182 LHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTP 241
LHADLLTRLKDDED RAVCQDLVRRFLSTKVGPRQGATATQEQVC DYICAEAPLFLDTP
Sbjct 182 LHADLLTRLKDDEDXRAVCQDLVRRFLSTKVGPRQGATATQEQVCXDYICAEAPLFLDTP 241
Query 242 AILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
AILGVPSSLNCYHQSLPLAE LYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 242 AILGVPSSLNCYHQSLPLAEXLYARGSGLRASRNQGHAIVTPDGSPAE 289
>gi|308232085|ref|ZP_07414869.2| hypothetical protein TMAG_00468 [Mycobacterium tuberculosis SUMu001]
gi|308377960|ref|ZP_07481077.2| hypothetical protein TMIG_00946 [Mycobacterium tuberculosis SUMu009]
gi|308380318|ref|ZP_07489524.2| hypothetical protein TMKG_00540 [Mycobacterium tuberculosis SUMu011]
gi|308215002|gb|EFO74401.1| hypothetical protein TMAG_00468 [Mycobacterium tuberculosis SUMu001]
gi|308353933|gb|EFP42784.1| hypothetical protein TMIG_00946 [Mycobacterium tuberculosis SUMu009]
gi|308361821|gb|EFP50672.1| hypothetical protein TMKG_00540 [Mycobacterium tuberculosis SUMu011]
Length=280
Score = 577 bits (1486), Expect = 8e-163, Method: Compositional matrix adjust.
Identities = 279/280 (99%), Positives = 280/280 (100%), Gaps = 0/280 (0%)
Query 10 VLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPF 69
+LISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPF
Sbjct 1 MLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPF 60
Query 70 TQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEAL 129
TQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEAL
Sbjct 61 TQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEAL 120
Query 130 GDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTR 189
GDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTR
Sbjct 121 GDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTR 180
Query 190 LKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSS 249
LKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSS
Sbjct 181 LKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSS 240
Query 250 LNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
LNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 241 LNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 280
>gi|289570394|ref|ZP_06450621.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289754381|ref|ZP_06513759.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289544148|gb|EFD47796.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289694968|gb|EFD62397.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=283
Score = 442 bits (1137), Expect = 3e-122, Method: Compositional matrix adjust.
Identities = 216/218 (99%), Positives = 216/218 (99%), Gaps = 0/218 (0%)
Query 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA
Sbjct 1 MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATA 60
Query 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV
Sbjct 61 QEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDV 120
Query 121 HVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
HVAESYEALG SAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR
Sbjct 121 HVAESYEALGGSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYR 180
Query 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGA 218
ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQG
Sbjct 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGG 218
>gi|167968224|ref|ZP_02550501.1| hypothetical protein MtubH3_09399 [Mycobacterium tuberculosis
H37Ra]
gi|253798657|ref|YP_003031658.1| hypothetical protein TBMG_01707 [Mycobacterium tuberculosis KZN
1435]
gi|254232419|ref|ZP_04925746.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
9 more sequence titles
Length=177
Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/177 (99%), Positives = 177/177 (100%), Gaps = 0/177 (0%)
Query 113 VDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSE 172
+DFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSE
Sbjct 1 MDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSE 60
Query 173 FQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICA 232
FQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICA
Sbjct 61 FQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICA 120
Query 233 EAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
EAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE
Sbjct 121 EAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE 177
>gi|289750875|ref|ZP_06510253.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289691462|gb|EFD58891.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=219
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/154 (99%), Positives = 152/154 (99%), Gaps = 0/154 (0%)
Query 65 LVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAE 124
+VRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAE
Sbjct 1 MVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAE 60
Query 125 SYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHA 184
SYEALG SAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHA
Sbjct 61 SYEALGGSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHA 120
Query 185 DLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGA 218
DLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQG
Sbjct 121 DLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGG 154
>gi|328881912|emb|CCA55151.1| hypothetical protein SVEN_1864 [Streptomyces venezuelae ATCC
10712]
Length=241
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/226 (60%), Positives = 161/226 (72%), Gaps = 0/226 (0%)
Query 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
E ++P+T C++I EG H VIGVSPGNSYF+ QRLR+L WG+ +FD+VD VYTD+H
Sbjct 10 ETLRLQPYTDHCRVIADEGAHVVIGVSPGNSYFTAQRLRELTRWGMDHFDQVDLVYTDLH 69
Query 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
V++ YEALG A EARRKAVKN+RGVRAK+ V E DP G R+ R MSEF AYR
Sbjct 70 VSDMYEALGYGADEARRKAVKNLRGVRAKVAAAVAEADPTGVRVRGRGMSEFGDVPAYRA 129
Query 182 LHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTP 241
LH +L + D +R C L FL+ K+ P Q Q +VC YICAE PLFLDTP
Sbjct 130 LHRTVLDAVAADPLVRETCDALTGIFLAGKLAPGQRTDERQREVCRAYICAEVPLFLDTP 189
Query 242 AILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSP 287
AILGVPSSLNCYHQ+LPLA++LY RG GLRASRNQGH I+TP +P
Sbjct 190 AILGVPSSLNCYHQALPLADLLYGRGPGLRASRNQGHGILTPTDTP 235
>gi|289443787|ref|ZP_06433531.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416706|gb|EFD13946.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=171
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/106 (98%), Positives = 104/106 (99%), Gaps = 0/106 (0%)
Query 113 VDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSE 172
+DFVYTDVHVAESYEALG SAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSE
Sbjct 1 MDFVYTDVHVAESYEALGGSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSE 60
Query 173 FQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGA 218
FQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQG
Sbjct 61 FQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGG 106
>gi|337768251|emb|CCB76964.1| protein of unknown function [Streptomyces cattleya NRRL 8057]
Length=240
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/221 (40%), Positives = 124/221 (57%), Gaps = 0/221 (0%)
Query 63 GFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHV 122
GF P T C++I EG H I V P + S R+ L W +F +VD V TD+ V
Sbjct 12 GFGFFPVTHTCRLIWEEGAHLTIPVGPWSPGASADRIAALTCWSARHFGQVDVVRTDLGV 71
Query 123 AESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYREL 182
A G +ARR+A R VRA I V E AG R+ VR +S+F + YR L
Sbjct 72 EGVLAAFGHDPWDARRRAAALDRAVRATIAQGVREAGAAGRRVRVRALSDFADHHMYRVL 131
Query 183 HADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPA 242
+ L +++LR C V++FL++++ AT Q + Y+ AE P +DTP
Sbjct 132 CHRVEAALTAEDELRQACDHTVQQFLASRLQDSGPATEDQLRAGRAYLTAELPFLVDTPG 191
Query 243 ILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
+LGVPSS+ C+ + PLAE+L+ RGSGLRA+R+QG+A+V P
Sbjct 192 LLGVPSSVFCHPVATPLAEVLFGRGSGLRAARDQGYAVVRP 232
>gi|256378646|ref|YP_003102306.1| hypothetical protein Amir_4627 [Actinosynnema mirum DSM 43827]
gi|255922949|gb|ACU38460.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827]
Length=233
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/236 (37%), Positives = 124/236 (53%), Gaps = 13/236 (5%)
Query 56 PEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDF 115
PE + F V PFT++ ++I +H V GVSPGNSYF R+ +L W DR+D
Sbjct 5 PEPDRRGAFTVEPFTEESRLIWERREHVVFGVSPGNSYFQVPRMAELFGWLRGESDRIDV 64
Query 116 VYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRP------ 169
V D + +Y ALG A RKA + +R +++ + AG RP
Sbjct 65 VIPDSALVHTYLALGYEERRAERKARAEVNVLRNRVSRA---WEAAGG---PRPGDGLNL 118
Query 170 MSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDY 229
MSE + E YR A+ L++DE LR ++ R L+ K G R A+ Q + M Y
Sbjct 119 MSELEGGEVYRARLAECERALREDEVLRGTSAEMSREVLALK-GHRGMASDEQVERAMRY 177
Query 230 ICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDG 285
+ AE P FL + I VP+S+N YH+ LPLAE++++ S LRAS Q +A + P G
Sbjct 178 LLAELPFFLASSEIFDVPTSVNFYHRKLPLAEVVFSGESLLRASPRQAYATIRPVG 233
>gi|323463044|pdb|3OQV|A Chain A, Albc, A Cyclodipeptide Synthase From Streptomyces Noursei
Length=247
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/212 (34%), Positives = 113/212 (54%), Gaps = 0/212 (0%)
Query 72 QCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGD 131
+ ++I G+HA+IG+S GNSYFS++ L W F+R D VY D H+ E A G
Sbjct 21 RSRLIRQRGEHALIGISAGNSYFSQKNTVMLLQWAGQRFERTDVVYVDTHIDEMLIADGR 80
Query 132 SAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLK 191
SA EA R + ++ +R ++ ++ + R VR +SE Q YR + +
Sbjct 81 SAQEAERSVKRTLKDLRRRLRRSLESVGDHAERFRVRSLSELQETPEYRAVRERTDRAFE 140
Query 192 DDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLN 251
+D + C+D+VR + + G G +A + ++Y+ AEAPLF D+P + VPSS+
Sbjct 141 EDAEFATACEDMVRAVVMNRPGDGVGISAEHLRAGLNYVLAEAPLFADSPGVFSVPSSVL 200
Query 252 CYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
CYH P+ L R +G RA+ Q + +V P
Sbjct 201 CYHIDTPITAFLSRRETGFRAAEGQAYVVVRP 232
>gi|27447466|gb|AAN07909.1| AlbC [Streptomyces noursei ATCC 11455]
Length=239
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/212 (34%), Positives = 113/212 (54%), Gaps = 0/212 (0%)
Query 72 QCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGD 131
+ ++I G+HA+IG+S GNSYFS++ L W F+R D VY D H+ E A G
Sbjct 21 RSRLIRQRGEHALIGISAGNSYFSQKNTVMLLQWAGQRFERTDVVYVDTHIDEMLIADGR 80
Query 132 SAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLK 191
SA EA R + ++ +R ++ ++ + R VR +SE Q YR + +
Sbjct 81 SAQEAERSVKRTLKDLRRRLRRSLESVGDHAERFRVRSLSELQETPEYRAVRERTDRAFE 140
Query 192 DDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLN 251
+D + C+D+VR + + G G +A + ++Y+ AEAPLF D+P + VPSS+
Sbjct 141 EDAEFATACEDMVRAVVMNRPGDGVGISAEHLRAGLNYVLAEAPLFADSPGVFSVPSSVL 200
Query 252 CYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
CYH P+ L R +G RA+ Q + +V P
Sbjct 201 CYHIDTPITAFLSRRETGFRAAEGQAYVVVRP 232
>gi|297560121|ref|YP_003679095.1| hypothetical protein Ndas_1148 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844569|gb|ADH66589.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=244
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/222 (34%), Positives = 114/222 (52%), Gaps = 6/222 (2%)
Query 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
+ F V PFT C+ + G+HA+IG+S GNSYFS++R+ L W +F VD +Y D+H
Sbjct 15 DAFDVLPFTGSCRRVFERGEHALIGISAGNSYFSQERIAQLLRWAQRHFAEVDVLYADLH 74
Query 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
+ Y A G S A +A + ++ VR +I V P + VR +S+ YR+
Sbjct 75 LDTMYMASGGSREHASSRANRALKDVRRRIRRAVEAAAPDAGNVRVRALSQCTGLPGYRD 134
Query 182 LHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTP 241
+ L D +R C++ VR + + P + + + Y+ AE PL L TP
Sbjct 135 VAYRLDREHATDPRVRRACEEHVRHVIGAQPDP----DGARLRAGLAYLRAELPLLLSTP 190
Query 242 AILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
+LG+PSS+ CYH +P+ L RG+ QGH I+ P
Sbjct 191 RVLGLPSSVCCYHALMPILSRL--RGATSCFHPGQGHVILRP 230
>gi|302524569|ref|ZP_07276911.1| predicted protein [Streptomyces sp. AA4]
gi|302433464|gb|EFL05280.1| predicted protein [Streptomyces sp. AA4]
Length=225
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/223 (35%), Positives = 109/223 (49%), Gaps = 5/223 (2%)
Query 63 GFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHV 122
GF V P T CQ + HAV GVSPGNSYF+ RLR W T F ++D + D +
Sbjct 5 GFRVEPLTAACQEVWESRRHAVFGVSPGNSYFNVDRLRSTLDWLQTEFKQIDVIIPDSAL 64
Query 123 AESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLC--VRPMSEFQSNEAYR 180
++ ALG +A +KA +R ++ L AG R + MSE Q++ Y
Sbjct 65 KHTFIALGYDEPKAAKKARSETNVLRNRVLRAWTAL--AGPRPTDGLHRMSELQADPVYT 122
Query 181 ELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDT 240
E+ A D L A ++ + L+ K G AT Q Y+ AE P F+ +
Sbjct 123 EVLAHCAQLTATDPALAAASTEMTQEVLAAK-GLTGEATPAQLAEAKKYLIAELPFFVSS 181
Query 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
I V +SLN YHQ LPLA ++++ S L+ QG+A + P
Sbjct 182 CRIFDVDASLNFYHQPLPLANVIFSGASALKPDPGQGYATIRP 224
>gi|337764924|emb|CCB73633.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=278
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/223 (34%), Positives = 112/223 (51%), Gaps = 6/223 (2%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F RP T C + G+HAV+GVS GNSYF LR L W F ++D V D
Sbjct 57 FNCRPLTPNCARVVDAGEHAVVGVSLGNSYFRGDILRALLRWLSGRFAQLDVVIPDSSYR 116
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELD-PAGARLCVRPMSEFQSNEAYREL 182
++ A G A KA + R+++ + E P V +S+ +N AYR L
Sbjct 117 DNLLAAGYQPAHADGKAHREAATARSRVLRSWREAGVPLSGDAHVHLLSDLTANPAYRAL 176
Query 183 HADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGAT--ATQEQVCMDYICAEAPLFLDT 240
+ L+ D +L A C + R L +++ +G T A Q + + Y+ AE P F+ +
Sbjct 177 RLRVEHALRLDPELYAECLAMSRAALRSQL---KGVTPSAAQAEAGIQYLTAELPFFIGS 233
Query 241 PAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
+ GV SSL YH+ +P+A++L+ R LR R QG+A++ P
Sbjct 234 AELFGVSSSLCFYHKPVPVADLLFTRPGPLRPPREQGYALIQP 276
>gi|337764227|emb|CCB72936.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=234
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/234 (33%), Positives = 115/234 (50%), Gaps = 15/234 (6%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F V P T+ C+++ DH V+GVSPGNSYF L +L +W F R+D V D +
Sbjct 7 FSVEPLTETCRVVVHNRDHVVLGVSPGNSYFRTSLLTELLVWLTEGFRRIDVVIPDTALT 66
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRP------MSEFQSNE 177
+YEALG + A K +R ++ ++ AG R RP MS+ +
Sbjct 67 HTYEALGYTPQRASVKVRGETNVLRNRVLRAWHD---AGGR---RPADGHHMMSDLAGHP 120
Query 178 AYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLF 237
Y+ + A L+ D LR C+ + R L + P Q Q + Y+ E P F
Sbjct 121 VYQRVLAQCEAALRVDAGLRRTCRAMSREALLAR-RPDQEPGPAQIDQGVRYLVEELPFF 179
Query 238 LDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV--TPDGSPAE 289
+ + I V SSL YH+ +PLA+++++ L AS QG+A++ P+ PAE
Sbjct 180 VASADIFEVGSSLCFYHRRIPLADVVFSGRCALAASPRQGYAVIRPVPEQLPAE 233
>gi|297197460|ref|ZP_06914857.1| predicted protein [Streptomyces sviceus ATCC 29083]
gi|297146733|gb|EFH28309.1| predicted protein [Streptomyces sviceus ATCC 29083]
Length=246
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/228 (33%), Positives = 105/228 (47%), Gaps = 1/228 (0%)
Query 57 EATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFV 116
EA + +GFL PF+++C + G H +G+SPGN YFS RL L W F R++
Sbjct 15 EARSGDGFLATPFSERCAGLVDAGHHVFLGISPGNGYFSEDRLLALLRWAAARFTRIEIA 74
Query 117 YTDVH-VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQS 175
+ D VA +Y G AR +A +++R +I+ V RL V S+F
Sbjct 75 HPDTDTVACTYLGRGYEPRHARARAHRDVRQTANRISRAVTSARIEPPRLRVARFSDFYD 134
Query 176 NEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAP 235
AYR + ++ R +V L T + +A Q +Y+ E P
Sbjct 135 TPAYRTALERVTRAHREQPAFRTTHTRMVTGVLRTTMPADWTPSAGQLAAGAEYLDRELP 194
Query 236 LFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
LDTPAILGVP+S+ Y + LA LY + L A QG V P
Sbjct 195 FLLDTPAILGVPASVFAYRATPALAGFLYGPDAPLPAVETQGFVTVEP 242
>gi|326793595|ref|YP_004311415.1| hypothetical protein Marme_0276 [Marinomonas mediterranea MMB-1]
gi|326544359|gb|ADZ89579.1| hypothetical protein Marme_0276 [Marinomonas mediterranea MMB-1]
Length=254
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/237 (29%), Positives = 111/237 (47%), Gaps = 8/237 (3%)
Query 53 RRIPEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDR 112
+ + T F + T +C I +G+H +G+SP NS FS++ +R + W NF +
Sbjct 16 KELKANTDYHAFSIHGETSRCNTIIAKGEHVFVGISPFNSRFSKEYIRAIIEWAQINFLQ 75
Query 113 VDFVYTDVHVAESY-EALGDSAIEARRKAVKNIRGVRAKITTTVN-ELDPAGARLCVRPM 170
VD + A A G S +A++K + +R + + ++ L G R V
Sbjct 76 VDILLPSTEEASRLLVATGYSTEKAKKKTARELRRLNKYVEEALSRSLIFEGIR--VIDF 133
Query 171 SEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKV-GPRQGATATQEQ---VC 226
S + Y EL ++ ++D R C + R+ L ++ G +G E+ +
Sbjct 134 SHYLLVPEYIELKDNVEKAFEEDSCFRESCLQMSRQALLGRLKGVGKGEQDLSEKDINIA 193
Query 227 MDYICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTP 283
+ YI AE P +LDTP IL V SS YH+ P+ + LYA L+ R Q + ++ P
Sbjct 194 LPYIFAELPFYLDTPRILNVSSSTLVYHRPWPIGKGLYAGEFNLKVGRFQSYGVIKP 250
>gi|302529819|ref|ZP_07282161.1| predicted protein [Streptomyces sp. AA4]
gi|302438714|gb|EFL10530.1| predicted protein [Streptomyces sp. AA4]
Length=227
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/218 (29%), Positives = 93/218 (43%), Gaps = 2/218 (0%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F P + C ++ +HA +GVS N YF+ RL L W +F F D
Sbjct 2 FEANPLSSDCAALYPGAEHACVGVSLFNGYFTADRLTRLVAWTAEHFPEYHFFVPDEVAV 61
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 183
+ EALG A A++K + V KI + + L + ++ ++ YREL
Sbjct 62 YTLEALGYPAARAKQKVHRQSCHVHNKIASALRVLGVPDPERRILGIARLRTMPDYRELL 121
Query 184 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAI 243
+ T+L+ D RA D L K G + A ++ + Y+ AE PLF + I
Sbjct 122 REAETQLESDPAFRAAAYDASSWVLQGKTGVAPDSEAL--RLAVRYLLAEIPLFAGSGLI 179
Query 244 LGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
G P S+ YHQ +P + R R QG +V
Sbjct 180 TGNPRSMFVYHQRVPFLRRFFDREFAFRPRVGQGFLVV 217
>gi|344925056|ref|ZP_08778517.1| hypothetical protein COdytL_10466 [Candidatus Odyssella thessalonicensis
L13]
Length=223
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (30%), Positives = 90/182 (50%), Gaps = 6/182 (3%)
Query 80 GDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRK 139
+HA+IG+SP N YFS Q + +L W NF D D + A+G + +A +K
Sbjct 21 NEHALIGISPFNGYFSTQNIENLIRWASNNFKDFDIFTMDSASKYNLMAIGYTEGDAIKK 80
Query 140 AVKNIRGVRAKITTTVNE--LDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLR 197
K + ++ KI + L A+ + +S NE Y EL+ + L K++ R
Sbjct 81 TKKQDQHLQNKIVRCLTNIGLTKEEAQKKIVFISHLYQNERYLELYKEYLNLFKNNTSFR 140
Query 198 AVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSL 257
+ C + + LS K+ +A + ++Y+ E P++ +TP ILG+ SS+ Y + L
Sbjct 141 SDCLNASKSILSQKIAEVTDESAY---LAVNYLLQEIPIWFNTPYILGINSSVFVY-KDL 196
Query 258 PL 259
PL
Sbjct 197 PL 198
>gi|229187741|ref|ZP_04314876.1| hypothetical protein bcere0004_52720 [Bacillus cereus BGSC 6E1]
gi|228595733|gb|EEK53418.1| hypothetical protein bcere0004_52720 [Bacillus cereus BGSC 6E1]
Length=239
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (26%), Positives = 95/227 (42%), Gaps = 12/227 (5%)
Query 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
+ F+ P + C I +HA+IG+SP NS FS + + L W L FD V +
Sbjct 11 QKFISHPLSTNCAEISKRSNHALIGISPFNSRFSDEYINRLIEWALHTFDDVSVLLAGKE 70
Query 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
A EALG +A RK K + R + E G + S+F N AY
Sbjct 71 AANLLEALGTPKGKAERKVRKEVSRNRRSAEKALKE--HGGNINAIHTFSDFNDNYAYNN 128
Query 182 LHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMD-------YICAEA 234
+ + ++ R C ++ + +G +G +Q+ D Y+ AE
Sbjct 129 MRTEAEHAFVNEPHFRNACLEMSH---AAILGRARGTNIDIDQISSDMLNIAVEYVIAEL 185
Query 235 PLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
P F+ ILG+ ++ YH+ L E + ++ NQG+ +V
Sbjct 186 PFFIGGAEILGIEETVLIYHKPWELGERIVRNDFSIKMKPNQGYLMV 232
>gi|296330285|ref|ZP_06872766.1| hypothetical protein BSU6633_04252 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676110|ref|YP_003867782.1| hypothetical protein BSUW23_17190 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296152553|gb|EFG93421.1| hypothetical protein BSU6633_04252 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414354|gb|ADM39473.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length=248
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (41%), Gaps = 12/225 (5%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F TQ C+ I H ++G+SP NS FS + L W F V + A
Sbjct 13 FTAESLTQNCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWATAEFKSVSVLLAGHEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 183
EALG +A RK K + R + G + S+F N+AY+ +
Sbjct 73 NLLEALGTPRGKAERKVRKEVSRNRRFAERALA--AHGGDTKAIHTFSDFAENKAYQLMR 130
Query 184 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMD-------YICAEAPL 236
++ D R C D+ R +G +G + E+V D Y+ AE P
Sbjct 131 QEVEHAFFDQPHFRHACLDMSR---EAMIGRARGISLMMEEVSEDMLNLAVEYVIAELPF 187
Query 237 FLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
F+ P IL V +L YH+ L E + + +R NQG+ IV
Sbjct 188 FIGAPDILEVEETLLAYHRPWKLGEKISNQEFSIRMRPNQGYLIV 232
>gi|228988985|ref|ZP_04149016.1| hypothetical protein bthur0001_56070 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228770747|gb|EEM19281.1| hypothetical protein bthur0001_56070 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length=239
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (27%), Positives = 94/225 (42%), Gaps = 12/225 (5%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F P + C I +HA+IG+SP NS FS + + L W L FD V + A
Sbjct 13 FNSHPLSSNCAEIFKRSNHALIGISPFNSRFSDEYINRLIKWALHTFDGVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 183
EALG +A RK K + R + ++ G + S+F N AY +
Sbjct 73 NLLEALGTPKGKAERKVRKEVSRNRRSAEKAL--IEHGGDVNAIYTFSDFNDNNAYNCMR 130
Query 184 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMD-------YICAEAPL 236
A+ ++ R C ++ + +G +G +Q+ D Y+ AE P
Sbjct 131 AEAEHNFLNETHFRNACLEMSH---AAILGRARGTNIDIDQISNDMLNIAVEYVIAELPF 187
Query 237 FLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
F+ ILG ++ YH+ L E + ++ NQG+ +V
Sbjct 188 FIGGAEILGTQETVLIYHKPWELGEQIVRNDFSIKMKPNQGYLMV 232
>gi|228905252|ref|ZP_04069243.1| hypothetical protein bthur0014_63370 [Bacillus thuringiensis
IBL 4222]
gi|228854406|gb|EEM99073.1| hypothetical protein bthur0014_63370 [Bacillus thuringiensis
IBL 4222]
Length=239
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (28%), Positives = 92/225 (41%), Gaps = 12/225 (5%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F +P + C I HA+IG+SP NS FS + + L W L FD V + A
Sbjct 13 FSSQPLSTNCAEILKRSKHAIIGISPFNSRFSDEYINRLIEWALHTFDDVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 183
EALG +A RK K + R + E G + S+F N AY +
Sbjct 73 NLLEALGTPKGKAERKVRKEVSRNRRSAEKALKE--HGGNVNAIHTFSDFNDNNAYSCMR 130
Query 184 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMD-------YICAEAPL 236
A+ + R C ++ + +G +G +Q+ D Y+ AE P
Sbjct 131 AEAEHIFLSETVFRNACLEMSH---AAILGRARGTNIDIDQISNDMLNIAVEYVIAELPF 187
Query 237 FLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
F+ ILG ++ YH+ L E + +R NQG+ +V
Sbjct 188 FIGGAEILGTQEAVLIYHKPWELGEQIVRNDFSIRMKPNQGYLMV 232
>gi|37524314|ref|NP_927658.1| hypothetical protein plu0297 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36783737|emb|CAE12592.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length=234
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/227 (28%), Positives = 103/227 (46%), Gaps = 11/227 (4%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVY-TDVHV 122
F V+ T +C I +GDHA+IG+SP NS FS+ + DL W F +VD + +
Sbjct 9 FTVQGETSRCDQIIQKGDHALIGISPFNSRFSKDYVVDLIQWSSHYFRQVDILLPCEREA 68
Query 123 AESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYREL 182
+ A G ++A +K + IR + ++ ++ V S+F N Y+ L
Sbjct 69 SRLLVASGIDNVKAIKKTHREIRRHLRNLDYVISTATLKSKQIRVIQFSDFSLNHDYQSL 128
Query 183 HADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQV-------CMDYICAEAP 235
+ + E + C D+ F + K G +G Q+ + YI AE P
Sbjct 129 KTQVENAFNESESFKKSCLDM--SFQAIK-GRLKGTGQYFGQIDLQLVYKALPYIFAEIP 185
Query 236 LFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVT 282
+L+TP +LGV S YH+ + + L+ ++ + Q + IVT
Sbjct 186 FYLNTPRLLGVKYSTLLYHRPWSIGKGLFNGSYPIQVADKQSYGIVT 232
>gi|323714500|pdb|3OQH|A Chain A, Crystal Structure Of B. Licheniformis Cdps Yvmc-Blic
gi|323714501|pdb|3OQH|B Chain B, Crystal Structure Of B. Licheniformis Cdps Yvmc-Blic
gi|323714502|pdb|3OQI|A Chain A, Crystal Structure Of B. Licheniformis Cdps Yvmc-Blic
In Complex With Ches
gi|323714504|pdb|3OQJ|A Chain A, Crystal Structure Of B. Licheniformis Cdps Yvmc-Blic
In Complex With Capso
gi|323714505|pdb|3OQJ|B Chain B, Crystal Structure Of B. Licheniformis Cdps Yvmc-Blic
In Complex With Capso
Length=257
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/225 (28%), Positives = 94/225 (42%), Gaps = 10/225 (4%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F TQ C I H ++G+SP NS FS + L W + F V + A
Sbjct 13 FKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
EALG +A RK K + R A+ + +P + S+F + AYR
Sbjct 73 NLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPED----IHTFSDFANQTAYRN 128
Query 182 LHADLLTRLKDDEDLRAVCQDLVR-RFLSTKVGPRQG---ATATQEQVCMDYICAEAPLF 237
L ++ D R C ++ L G R +A ++ ++Y+ AE P F
Sbjct 129 LRMEVEAAFFDQTHFRNACLEMSHAAILGRARGTRMDVVEVSADMLELAVEYVIAELPFF 188
Query 238 LDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVT 282
+ P ILGV +L YH+ L E + ++ NQG+ +V+
Sbjct 189 IAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVS 233
>gi|52081867|ref|YP_080658.1| hypothetical protein BL00817 [Bacillus licheniformis ATCC 14580]
gi|52787255|ref|YP_093084.1| YvmC [Bacillus licheniformis ATCC 14580]
gi|319647785|ref|ZP_08002003.1| hypothetical protein HMPREF1012_03042 [Bacillus sp. BT1B_CT2]
gi|52005078|gb|AAU25020.1| conserved hypothetical protein YvmC [Bacillus licheniformis ATCC
14580]
gi|52349757|gb|AAU42391.1| YvmC [Bacillus licheniformis ATCC 14580]
gi|317390126|gb|EFV70935.1| hypothetical protein HMPREF1012_03042 [Bacillus sp. BT1B_CT2]
Length=249
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/225 (28%), Positives = 94/225 (42%), Gaps = 10/225 (4%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F TQ C I H ++G+SP NS FS + L W + F V + A
Sbjct 13 FKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
EALG +A RK K + R A+ + +P + S+F + AYR
Sbjct 73 NLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPED----IHTFSDFANQTAYRN 128
Query 182 LHADLLTRLKDDEDLRAVCQDLVR-RFLSTKVGPRQG---ATATQEQVCMDYICAEAPLF 237
L ++ D R C ++ L G R +A ++ ++Y+ AE P F
Sbjct 129 LRMEVEAAFFDQTHFRNACLEMSHAAILGRARGTRMDVVEVSADMLELAVEYVIAELPFF 188
Query 238 LDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVT 282
+ P ILGV +L YH+ L E + ++ NQG+ +V+
Sbjct 189 IAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVS 233
>gi|16080560|ref|NP_391387.1| hypothetical protein BSU35070 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311457|ref|ZP_03593304.1| hypothetical protein Bsubs1_18981 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315784|ref|ZP_03597589.1| hypothetical protein BsubsN3_18897 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320699|ref|ZP_03601993.1| hypothetical protein BsubsJ_18860 [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221324984|ref|ZP_03606278.1| hypothetical protein BsubsS_19016 [Bacillus subtilis subsp. subtilis
str. SMY]
gi|81637552|sp|O34351.1|YVMC_BACSU RecName: Full=Uncharacterized protein yvmC
gi|2618850|gb|AAC67279.1| YvmC [Bacillus subtilis]
gi|2636020|emb|CAB15512.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
Length=248
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/227 (28%), Positives = 95/227 (42%), Gaps = 16/227 (7%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F+ T+ C+ I H ++G+SP NS FS + L W F V + A
Sbjct 13 FIAEALTENCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWAKAQFKSVSVLLAGHEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
EALG +A RK K + R A+ + DP + S+F N+AY+
Sbjct 73 NLLEALGTPRGKAERKVRKEVSRNRRFAERALVAHGGDPKA----IHTFSDFIDNKAYQL 128
Query 182 LHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMD-------YICAEA 234
L ++ + R C D+ R + +G +G + E+V D Y+ AE
Sbjct 129 LRQEVEHAFFEQPHFRHACLDMSREAI---IGRARGVSLMMEEVSEDMLNLAVEYVIAEL 185
Query 235 PLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
P F+ P IL V +L YH+ L E + + NQG+ IV
Sbjct 186 PFFIGAPDILEVEETLLAYHRPWKLGEKISNHEFSICMRPNQGYLIV 232
>gi|340708270|pdb|3S7T|A Chain A, Crystal Structure Of Semet B. Licheniformis Cdps Yvmc-Blic
gi|340708271|pdb|3S7T|B Chain B, Crystal Structure Of Semet B. Licheniformis Cdps Yvmc-Blic
Length=257
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (28%), Positives = 92/225 (41%), Gaps = 10/225 (4%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F TQ C I H ++G+SP NS FS + L W + F V + A
Sbjct 13 FKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
EALG +A RK K + R A+ + +P + S+F + AYR
Sbjct 73 NLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPED----IHTFSDFANQTAYRN 128
Query 182 LHADLLTRLKDDEDLRAVCQDLVR-RFLSTKVGPRQG---ATATQEQVCMDYICAEAPLF 237
L ++ D R C + L G R +A ++ ++Y+ AE P F
Sbjct 129 LRXEVEAAFFDQTHFRNACLEXSHAAILGRARGTRXDVVEVSADXLELAVEYVIAELPFF 188
Query 238 LDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVT 282
+ P ILGV +L YH+ L E + ++ NQG+ V+
Sbjct 189 IAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKXRPNQGYLXVS 233
>gi|75758511|ref|ZP_00738632.1| Hypothetical protein RBTH_07362 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74494038|gb|EAO57133.1| Hypothetical protein RBTH_07362 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length=238
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/225 (27%), Positives = 92/225 (41%), Gaps = 13/225 (5%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F +P + C I HA+IG+SP NS FS + + L W L FD V + A
Sbjct 13 FSSQPLSTNCAEILKRSKHAIIGISPFNSRFSDEYINRLIEWALHTFDDVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELH 183
EALG + + + K K I R + E G + S+F N AY +
Sbjct 73 NLLEALGHQS-KRKEKLGKKISRNRRSAEKALKE--HGGNVNAIHTFSDFNDNNAYSCMR 129
Query 184 ADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMD-------YICAEAPL 236
A+ + R C ++ + +G +G +Q+ D Y+ AE P
Sbjct 130 AEAEHIFLSETVFRNACLEMSH---AAILGRARGTNIDIDQISNDMLNIAVEYVIAELPF 186
Query 237 FLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIV 281
F+ ILG ++ YH+ L E + +R NQG+ +V
Sbjct 187 FIGGAEILGTQEAVLIYHKPWELGEQIVRNDFSIRMKPNQGYLMV 231
>gi|68535056|ref|YP_254604.1| hypothetical protein pSHaeC06 [Staphylococcus haemolyticus JCSC1435]
gi|68448417|dbj|BAE05998.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length=234
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/229 (23%), Positives = 98/229 (43%), Gaps = 8/229 (3%)
Query 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
+ F V T+ C+ I+ H ++G+SP S ++ +R + W +NFD +
Sbjct 2 QNFKVDFLTKNCKQIYQRKKHVILGISPFTSKYNESYIRKIIQWANSNFDDFSILLAGEE 61
Query 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLC--VRPMSEFQSNEAY 179
E LG S+ +A +K K I + +I +E+ + + S+F++N Y
Sbjct 62 SKNLLECLGYSSSKANQKVRKEI---KRQIRFCEDEIIKCNKTITNRIHRFSDFKNNIYY 118
Query 180 RELHADLLTRLKDDEDLRAVCQDLVRRFLSTK---VGPRQGATATQEQVCMDYICAEAPL 236
+++ ++ + D + + C + + L +K V T + Y+ AE P
Sbjct 119 IDIYKTIVDQFNTDSNFKNSCLKMSLQALQSKGKNVNTSIEITDETLEYAAQYVLAELPF 178
Query 237 FLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDG 285
FL+ I+ +L YH L + L+ + QG+ I+T G
Sbjct 179 FLNANPIINTQETLMAYHAPWELGTNIINDQFNLKMNEKQGYIILTEKG 227
>gi|323714503|pdb|3OQI|B Chain B, Crystal Structure Of B. Licheniformis Cdps Yvmc-Blic
In Complex With Ches
Length=257
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (27%), Positives = 93/225 (42%), Gaps = 10/225 (4%)
Query 64 FLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVA 123
F TQ I H ++G+SP NS FS + L W + F V + A
Sbjct 13 FKTETLTQNXNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAA 72
Query 124 ESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRE 181
EALG +A RK K + R A+ + +P + S+F + AYR
Sbjct 73 NLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPED----IHTFSDFANQTAYRN 128
Query 182 LHADLLTRLKDDEDLRAVCQDLVRR-FLSTKVGPRQGA---TATQEQVCMDYICAEAPLF 237
L ++ D R C ++ L G R +A ++ ++Y+ AE P F
Sbjct 129 LRMEVEAAFFDQTHFRNACLEMSHAAILGRARGTRMDVVEVSADMLELAVEYVIAELPFF 188
Query 238 LDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVT 282
+ P ILGV +L YH+ L E + ++ NQG+ +V+
Sbjct 189 IAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVS 233
>gi|319892997|ref|YP_004149872.1| YvmC [Staphylococcus pseudintermedius HKU10-03]
gi|317162693|gb|ADV06236.1| YvmC [Staphylococcus pseudintermedius HKU10-03]
gi|323463949|gb|ADX76102.1| conserved hypothetical protein [Staphylococcus pseudintermedius
ED99]
Length=223
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/222 (24%), Positives = 87/222 (40%), Gaps = 8/222 (3%)
Query 62 EGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVH 121
+ F V T+ C+ I+ H ++G+SP S ++ +R L W TNF +
Sbjct 3 QQFKVDFLTENCKKIYQRKKHVILGISPFTSKYNETYIRKLIQWANTNFKDFSILLAGEE 62
Query 122 VAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRP--MSEFQSNEAY 179
E LG S +A RK K V +I NEL + R S+F+ N Y
Sbjct 63 SKNLLECLGYSTTKANRKVRK---EVNRQIRFCENELLNCNRTINDRIFRFSDFKQNTYY 119
Query 180 RELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGA---TATQEQVCMDYICAEAPL 236
++ + D+ + C ++ + L +K T + Y+ AE P
Sbjct 120 VNMYQKIEGLFNTDDSFKKCCLNMSLQALQSKKNNLNSTIEFTNDMLEYSAQYVLAELPF 179
Query 237 FLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGH 278
FL+ I+ +L YH L + L+ +QG+
Sbjct 180 FLNANPIINTYETLMAYHAEWELGTNIINNMFDLKMDSHQGY 221
>gi|294013248|ref|YP_003546708.1| hypothetical protein SJA_C1-32620 [Sphingobium japonicum UT26S]
gi|292676578|dbj|BAI98096.1| hypothetical protein SJA_C1-32620 [Sphingobium japonicum UT26S]
Length=218
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (28%), Positives = 89/210 (43%), Gaps = 6/210 (2%)
Query 82 HAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAV 141
HA+I VS NSY+S R+ L W F+R D+ A + A + + R+A
Sbjct 8 HALIAVSLFNSYYSTDRITTLVRWAKHTFERSHIPVFDLPHAYTLSARKGHSPGSVRRAR 67
Query 142 KNIRGVRAKITTTVNE--LDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAV 199
K R + KI E +D RL + N+ Y +L D+ D R
Sbjct 68 KEGRKLHNKIARIHAEEGIDSDAHRLLT--WDDLVRNDDYLQLRVDVDRAFCTDACFRQA 125
Query 200 CQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSLPL 259
C + L ++ A + Y+ E PL +D P+I+ SS+ YH++ L
Sbjct 126 CLTMADTLLDPEITDEDDRRAAC-FLAARYLLDELPLLIDLPSIIKCDSSVFLYHRAPSL 184
Query 260 AEMLYARGSGLRASRNQGHAIVTPDGSPAE 289
+ L+ L+ S QG+ I++ D S E
Sbjct 185 LKQLFEGRFTLKPSDRQGYFILS-DASEIE 213
>gi|344924850|ref|ZP_08778311.1| hypothetical protein COdytL_09416 [Candidatus Odyssella thessalonicensis
L13]
Length=127
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (33%), Positives = 47/104 (46%), Gaps = 7/104 (6%)
Query 175 SNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQE--QVCMDYICA 232
SN+ Y +L+ L++D R C LS+K R T T +V + Y A
Sbjct 22 SNKEYLQLYHKCKHLLENDPIFRNGCLSTSEWVLSSK---RISETLTPRALEVAVQYFLA 78
Query 233 EAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQ 276
E PLFLDTP IL +P S Y + LY + + S+ Q
Sbjct 79 ELPLFLDTPRILNIPISTFVYKDIPKFLKFLYEK--NMHVSKGQ 120
>gi|340506300|gb|EGR32470.1| hypothetical protein IMG5_081850 [Ichthyophthirius multifiliis]
Length=151
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/38 (37%), Positives = 25/38 (66%), Gaps = 0/38 (0%)
Query 79 EGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFV 116
+ +H +IG+SP N YF+ + + L W L+ F++V F+
Sbjct 34 QKEHIIIGISPANGYFTYEIIEKLTTWALSEFNKVTFI 71
>gi|344924849|ref|ZP_08778310.1| hypothetical protein COdytL_09411 [Candidatus Odyssella thessalonicensis
L13]
Length=120
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (33%), Positives = 32/64 (50%), Gaps = 0/64 (0%)
Query 81 DHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKA 140
+H +IGVSP NSYF+ + L L W L F ++ + +++A+G A RK
Sbjct 55 EHGLIGVSPFNSYFTVETLEGLFSWALKTFKDMNVFIPTTISSYTFQAIGYPESRATRKT 114
Query 141 VKNI 144
I
Sbjct 115 KNKI 118
>gi|68536000|ref|YP_250705.1| hypothetical protein jk0923 [Corynebacterium jeikeium K411]
gi|68263599|emb|CAI37087.1| hypothetical protein jk0923 [Corynebacterium jeikeium K411]
Length=216
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/209 (16%), Positives = 87/209 (42%), Gaps = 8/209 (3%)
Query 77 HTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVY----TDVHVAESYEALGDS 132
++ +H ++GVSP N F+ + L WG F+ VD ++ + + + LG +
Sbjct 3 ESKQEHLIVGVSPFNPRFTPEWLSSAFQWGAERFNTVDVLHPGEISMSLLTSTGTPLGRA 62
Query 133 AIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKD 192
+ R++ +++R V + + +L L +S++ ++Y+ ++ ++
Sbjct 63 KRKVRQQCNRDMRNVEHALEISGIKLGRGKPVL----ISDYLQTQSYQCRRRSVIAEFQN 118
Query 193 DEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNC 252
++ + C+ + R +++ + + YI E P + + ++
Sbjct 119 NQIFQDACRAMSRAACQSRLRVTNVNIEPDIETAVKYIFDELPAYTHCSDLFEYETAALG 178
Query 253 YHQSLPLAEMLYARGSGLRASRNQGHAIV 281
Y P+ +++ + + L N ++
Sbjct 179 YPTEWPIGKLIESGLTSLERDPNSSFIVI 207
>gi|242820335|ref|XP_002487489.1| cell wall glucanase (Scw11), putative [Talaromyces stipitatus
ATCC 10500]
gi|218713954|gb|EED13378.1| cell wall glucanase (Scw11), putative [Talaromyces stipitatus
ATCC 10500]
Length=587
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 48/216 (23%), Positives = 89/216 (42%), Gaps = 35/216 (16%)
Query 28 HDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGDHAV--- 84
HD+ A TG T D A S Q+ + A + +R ++ C + T A+
Sbjct 321 HDQYAVTYTGYTHDTGACMSADQVLPELKNIQANGFYAIRMYSTDCNQLETVASQAIGLG 380
Query 85 -----------IGVSPGNSYFSRQRLRDLGLWGLTN-FDRVDFVYTDVH-VAESYEALGD 131
GVS G+S ++ D+ WG +N +D V+F+ D +++ + + D
Sbjct 381 LKVILGVYIDGSGVSSGHS-----QVSDIVNWGKSNGWDGVEFISLDNEALSDGFCSASD 435
Query 132 SA--IEARRKAVKNIRGVRAKITTT--VNELDPAGARLCVRPMSEFQSNEAYRELHADLL 187
A + + ++ +K G + T +N +G+ LC + +F S ++D+
Sbjct 436 LAGFVSSAKETIK-AAGYSGQFTVAEPLNVWQSSGSTLC--SVVDFASANLQAFFNSDVA 492
Query 188 TRLKDD------EDLRAVCQDLVRRFLSTKVGPRQG 217
D E L+ +C + + F+S P G
Sbjct 493 AETAGDFVASEVEILKGICNND-QVFVSESGWPNAG 527
>gi|220917871|ref|YP_002493175.1| methyl-accepting chemotaxis sensory transducer [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955725|gb|ACL66109.1| methyl-accepting chemotaxis sensory transducer [Anaeromyxobacter
dehalogenans 2CP-1]
Length=547
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/107 (34%), Positives = 55/107 (52%), Gaps = 6/107 (5%)
Query 112 RVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGV---RAKITTTVNELDPAGARLCVR 168
R V+T + E Y L EA + +++ R V RA+ T NEL P AR+
Sbjct 78 REALVHTMTALDERYRVLLQGDPEAGTEPIRDPRVVASLRAREGTWTNELRPLLARVMAA 137
Query 169 P-MSEFQSN-EAYRELHADLLTRLKDDEDLRA-VCQDLVRRFLSTKV 212
P +E Q++ + +RE+H LT+L+ D + A V VR+FL +V
Sbjct 138 PGRAEAQADLDRFREIHERYLTQLQGDSAVAAQVTAGRVRQFLVVQV 184
Lambda K H
0.318 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 470845709104
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40